Query 007834
Match_columns 588
No_of_seqs 161 out of 1460
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 15:58:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007834.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007834hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12849 groEL chaperonin GroE 100.0 1E-112 2E-117 946.2 61.1 527 50-579 2-529 (542)
2 PRK00013 groEL chaperonin GroE 100.0 2E-112 4E-117 943.9 60.0 533 50-585 2-536 (542)
3 PLN03167 Chaperonin-60 beta su 100.0 2E-112 4E-117 950.3 58.5 532 45-578 51-586 (600)
4 PRK12851 groEL chaperonin GroE 100.0 1E-111 2E-116 938.9 59.9 534 50-586 3-537 (541)
5 PRK12850 groEL chaperonin GroE 100.0 1E-111 3E-116 938.4 59.3 526 50-578 3-529 (544)
6 PTZ00114 Heat shock protein 60 100.0 4E-111 9E-116 937.1 59.9 529 47-577 11-544 (555)
7 PRK12852 groEL chaperonin GroE 100.0 6E-111 1E-115 934.8 59.9 526 49-577 2-529 (545)
8 TIGR02348 GroEL chaperonin Gro 100.0 2E-110 4E-115 927.5 59.2 521 51-574 2-523 (524)
9 CHL00093 groEL chaperonin GroE 100.0 1E-110 3E-115 929.0 58.6 523 50-575 2-527 (529)
10 PRK14104 chaperonin GroEL; Pro 100.0 7E-110 2E-114 924.1 59.3 525 50-577 3-529 (546)
11 cd03344 GroEL GroEL_like type 100.0 1E-109 3E-114 919.0 58.2 518 51-570 1-519 (520)
12 KOG0356 Mitochondrial chaperon 100.0 1E-102 2E-107 821.3 41.3 526 49-578 15-542 (550)
13 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 3.1E-93 6.6E-98 784.1 46.4 452 51-572 5-483 (484)
14 cd03339 TCP1_epsilon TCP-1 (CT 100.0 5.8E-93 1.3E-97 790.1 48.9 471 36-570 1-526 (526)
15 TIGR02347 chap_CCT_zeta T-comp 100.0 1.1E-92 2.5E-97 786.1 50.9 461 51-576 9-529 (531)
16 TIGR02343 chap_CCT_epsi T-comp 100.0 1.3E-92 2.8E-97 787.0 50.6 474 34-571 3-531 (532)
17 TIGR02339 thermosome_arch ther 100.0 3.5E-92 7.5E-97 783.1 51.1 457 50-570 8-518 (519)
18 cd03343 cpn60 cpn60 chaperonin 100.0 3.5E-92 7.6E-97 783.3 50.7 458 51-572 8-517 (517)
19 cd03335 TCP1_alpha TCP-1 (CTT 100.0 2.3E-92 5.1E-97 785.4 49.0 462 53-574 3-527 (527)
20 TIGR02340 chap_CCT_alpha T-com 100.0 1.1E-91 2.4E-96 781.1 50.0 464 52-575 6-532 (536)
21 COG0459 GroL Chaperonin GroEL 100.0 2.3E-93 5E-98 782.8 34.4 499 49-577 2-518 (524)
22 cd03338 TCP1_delta TCP-1 (CTT 100.0 1.5E-91 3.2E-96 777.7 48.7 462 53-571 3-515 (515)
23 TIGR02344 chap_CCT_gamma T-com 100.0 6.4E-91 1.4E-95 773.9 50.1 460 51-575 9-524 (525)
24 TIGR02342 chap_CCT_delta T-com 100.0 6.3E-91 1.4E-95 771.9 49.1 464 51-571 2-516 (517)
25 TIGR02345 chap_CCT_eta T-compl 100.0 6.8E-91 1.5E-95 772.5 49.1 460 51-572 11-520 (522)
26 cd03336 TCP1_beta TCP-1 (CTT o 100.0 2.1E-90 4.6E-95 767.7 51.9 458 52-575 7-516 (517)
27 cd03340 TCP1_eta TCP-1 (CTT or 100.0 1.5E-90 3.2E-95 770.5 50.6 460 52-572 10-520 (522)
28 PTZ00212 T-complex protein 1 s 100.0 4.6E-90 1E-94 767.1 51.8 460 51-576 15-529 (533)
29 TIGR02346 chap_CCT_theta T-com 100.0 8.2E-90 1.8E-94 764.3 49.9 457 53-575 12-522 (531)
30 TIGR02341 chap_CCT_beta T-comp 100.0 8.4E-89 1.8E-93 754.3 52.3 458 52-575 8-517 (519)
31 cd03337 TCP1_gamma TCP-1 (CTT 100.0 1.8E-89 3.8E-94 754.0 46.4 439 51-570 9-479 (480)
32 cd00309 chaperonin_type_I_II c 100.0 2.4E-87 5.1E-92 735.9 49.0 438 52-570 2-464 (464)
33 cd03341 TCP1_theta TCP-1 (CTT 100.0 2.2E-87 4.9E-92 735.9 46.5 438 55-571 5-471 (472)
34 KOG0361 Chaperonin complex com 100.0 4.5E-88 9.8E-93 680.2 33.5 462 50-572 12-523 (543)
35 KOG0358 Chaperonin complex com 100.0 2.1E-83 4.6E-88 645.4 30.9 464 50-571 18-533 (534)
36 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 1.3E-80 2.7E-85 685.9 44.4 440 70-574 1-485 (485)
37 KOG0363 Chaperonin complex com 100.0 6.8E-79 1.5E-83 610.2 33.1 461 53-579 13-525 (527)
38 KOG0357 Chaperonin complex com 100.0 6.8E-77 1.5E-81 591.6 18.3 381 34-572 4-396 (400)
39 KOG0362 Chaperonin complex com 100.0 2.9E-71 6.4E-76 575.3 38.4 453 57-575 25-523 (537)
40 KOG0360 Chaperonin complex com 100.0 2.6E-72 5.7E-77 579.3 30.2 466 52-578 13-541 (545)
41 KOG0364 Chaperonin complex com 100.0 5.2E-71 1.1E-75 564.8 22.9 459 50-572 11-521 (527)
42 KOG0359 Chaperonin complex com 100.0 4.3E-66 9.4E-71 528.1 25.1 450 58-572 17-515 (520)
43 cd03333 chaperonin_like chaper 100.0 1.4E-28 2.9E-33 242.8 21.3 192 188-455 2-209 (209)
44 cd03334 Fab1_TCP TCP-1 like do 99.9 1.1E-26 2.5E-31 236.4 21.1 197 201-456 20-254 (261)
45 KOG0230 Phosphatidylinositol-4 99.2 3.2E-10 6.9E-15 132.8 14.6 206 201-465 334-577 (1598)
46 COG0459 GroL Chaperonin GroEL 97.3 0.00045 9.7E-09 77.3 6.8 89 279-383 259-354 (524)
47 TIGR02345 chap_CCT_eta T-compl 44.7 13 0.00027 42.1 1.9 59 290-349 247-314 (522)
48 smart00574 POX domain associat 41.5 83 0.0018 29.1 6.2 59 405-476 69-128 (140)
49 PF07526 POX: Associated with 25.0 1.8E+02 0.0039 27.0 5.7 58 406-476 70-128 (140)
50 KOG1593 Asparaginase [Amino ac 22.5 1.7E+02 0.0037 30.1 5.4 57 439-507 105-164 (349)
No 1
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1e-112 Score=946.19 Aligned_cols=527 Identities=50% Similarity=0.785 Sum_probs=510.5
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
.|.+.||.+++..+++|+..++++++|||||+||+|||++ .|+++|||||+||+++|+++||.+|++|+|++++|++||
T Consensus 2 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~qd 81 (542)
T PRK12849 2 AKIIKFDEEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASKTN 81 (542)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li 208 (588)
+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++|+++.++|.++|+||+++++.+++++
T Consensus 82 ~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~lv 161 (542)
T PRK12849 82 DVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSGSEEIAQVATISANGDEEIGELI 161 (542)
T ss_pred CccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhc
Q 007834 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (588)
Q Consensus 209 ~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~ 288 (588)
++|+..++++|.|.++.|++++|++++++|++|+++|.||+|.++.+.|+++++||+|+++|+.|++++++.++++++.+
T Consensus 162 ~~Av~~v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~~~~~l~~i~~ 241 (542)
T PRK12849 162 AEAMEKVGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKISSLQDLLPLLEKVAQ 241 (542)
T ss_pred HHHHHHhccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCcCCHHHHHHHHHHHHH
Confidence 99999999888889999999998669999999999999999999888899999999999999999999999999999999
Q ss_pred CCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEE
Q 007834 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARK 368 (588)
Q Consensus 289 ~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~ 368 (588)
+|+||||++++|+++|+++|.+|+++|.++|+|||+|++++.|+++|+|||.+|||++++++.+.+++++++++||+|+.
T Consensus 242 ~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~~~~ 321 (542)
T PRK12849 242 SGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGRAKR 321 (542)
T ss_pred hCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHHHCceeeE
Confidence 99999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred EEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 007834 369 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 448 (588)
Q Consensus 369 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~ 448 (588)
|+++++++++++++++++.++.|+++|+++++++.++|++++|+||+++|+++.+||+|||+|+.+++|++|+++||+|+
T Consensus 322 v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl~~ 401 (542)
T PRK12849 322 VTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDALNA 401 (542)
T ss_pred EEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeEEc
Q 007834 449 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNA 528 (588)
Q Consensus 449 ~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gid~ 528 (588)
+|+++++|+|||||++|++++.+|.+++ +.++.+ ++++++|++||+.||++||+|||+|+.+++++|++.++++|||+
T Consensus 402 ~~~a~~~g~VpGGGa~e~~ls~~L~~~~-~~~g~~-~~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~~~~G~d~ 479 (542)
T PRK12849 402 TRAAVEEGIVPGGGVALLRAAKALDELA-GLNGDQ-AAGVEIVRRALEAPLRQIAENAGLDGSVVVAKVLELEDGFGFNA 479 (542)
T ss_pred HHHHHHcCeecCCCHHHHHHHHHHHHhh-CCChHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhCCCcceeC
Confidence 9999999999999999999999999988 666654 69999999999999999999999999999999998777899999
Q ss_pred cCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCCC
Q 007834 529 MTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPA 579 (588)
Q Consensus 529 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~~ 579 (588)
.+|++.||++.|||||+.+|.++|+.|+++|++||+||++|+.+ |+...|
T Consensus 480 ~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~iL~id~iI~~~-~~~~~~ 529 (542)
T PRK12849 480 ATGEYGDLIAAGIIDPVKVTRSALQNAASVAGLLLTTEALVADK-PEEEDP 529 (542)
T ss_pred CCCccccHHhccCccCHHHHHHHHHHHHHHHHHHHhHHHHHhcC-CccCCC
Confidence 99999999999999999999999999999999999999999998 865444
No 2
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=2e-112 Score=943.85 Aligned_cols=533 Identities=51% Similarity=0.792 Sum_probs=508.4
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
.|++.||.+++..|++|+..++++++|||||+||+|||++ .|+++|||||+||+|+|+++||.+|+||+|++++|++||
T Consensus 2 ~~~~~~~~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~qd 81 (542)
T PRK00013 2 AKDIKFGEDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASKTN 81 (542)
T ss_pred CchhhchHHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li 208 (588)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|+++.++|.++|+||+++++.+++++
T Consensus 82 ~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~~~~l~~va~ts~~~~~~ls~lv 161 (542)
T PRK00013 82 DVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVEDKEEIAQVATISANGDEEIGKLI 161 (542)
T ss_pred cccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhc
Q 007834 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (588)
Q Consensus 209 ~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~ 288 (588)
++|+..++++|.|.++.+....+.+++++|++|+++|.||||.++++.|+++++||+|+++|++|++++++.++++++.+
T Consensus 162 ~~Av~~v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~i~~~~~l~~~l~~i~~ 241 (542)
T PRK00013 162 AEAMEKVGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKKISNIQDLLPVLEQVAQ 241 (542)
T ss_pred HHHHHHhCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCccCCHHHHHHHHHHHHH
Confidence 99999999888888865544444449999999999999999999888899999999999999999999999999999999
Q ss_pred CCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEE
Q 007834 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARK 368 (588)
Q Consensus 289 ~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~ 368 (588)
.|+||||++++|+++|+++|..|+++|+++|+|||+|+|++.|+++|+|||++|||++++++.|++++++++++||+|+.
T Consensus 242 ~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~ 321 (542)
T PRK00013 242 SGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQAKK 321 (542)
T ss_pred hCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred EEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 007834 369 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 448 (588)
Q Consensus 369 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~ 448 (588)
|+++++++++|+++++++.+..|+++|+.+++++.++|++++|+||+++|+|+.+||+|||+|+.+++|++|+++||+|+
T Consensus 322 v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal~~ 401 (542)
T PRK00013 322 VVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHA 401 (542)
T ss_pred EEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC-CCceeEE
Q 007834 449 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-DWRFGYN 527 (588)
Q Consensus 449 ~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~-~~~~Gid 527 (588)
+|+++++|+|||||++|++|+.+|.++ ++..+.+ ++++++|++||+.||++||+|||+|+.+++++|++. ++++|||
T Consensus 402 vk~al~~g~VpGGGa~e~~~s~~L~~~-~~~~~~~-~~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G~d 479 (542)
T PRK00013 402 TRAAVEEGIVPGGGVALLRAAPALEAL-KGLNGDE-ATGINIVLRALEAPLRQIAENAGLEGSVVVEKVKNGKGKGYGYN 479 (542)
T ss_pred HHHHHHcCcccCcHHHHHHHHHHHHHh-cCCChHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCEeEe
Confidence 999999999999999999999999988 5556654 699999999999999999999999999999999874 5679999
Q ss_pred ccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCCCCCCCCC
Q 007834 528 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPG 585 (588)
Q Consensus 528 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~~~~~~~~ 585 (588)
+.+|++.||++.|||||+.||.++|+.|+++|++||++|++|+.+ |++++.-|.|-|
T Consensus 480 ~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~-~~~~~~~~~~~~ 536 (542)
T PRK00013 480 AATGEYVDMIEAGIIDPTKVTRSALQNAASVAGLLLTTEAVVADK-PEKKAAAPPMGG 536 (542)
T ss_pred CCCCceeehhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCC
Confidence 999999999999999999999999999999999999999999998 876654444443
No 3
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=1.8e-112 Score=950.34 Aligned_cols=532 Identities=48% Similarity=0.778 Sum_probs=513.6
Q ss_pred HhhcccchhhcCH--HHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHH
Q 007834 45 VVRAGPKKILFGK--ESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQ 121 (588)
Q Consensus 45 ~~~~~~~~~~~g~--~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~ 121 (588)
++...+|++.||. +||+.+++|+..|+++|++||||+||+|||++ .|+++|||||+||+|+|+++||++|+||+|++
T Consensus 51 ~~~~~~k~~~~~~~~~ar~~l~~g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~ 130 (600)
T PLN03167 51 PKVKAAKELHFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVR 130 (600)
T ss_pred chhhhcceeecCCcHHHHHHHHHHHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHH
Confidence 4456789999999 79999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCc
Q 007834 122 EVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGND 201 (588)
Q Consensus 122 ~~a~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~ 201 (588)
++|++||+++||||||++|||++||+++.++++.|+||..|++||++|.+.+++.|++++.|+++ ++|.++|++|++++
T Consensus 131 ~~a~~qd~evGDGTTTvvVLa~~LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d-~~L~~vA~tS~~~~ 209 (600)
T PLN03167 131 QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVED-SELADVAAVSAGNN 209 (600)
T ss_pred HHHHhhhhhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCH-HHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999976 67999999999999
Q ss_pred hhHHHHHHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHH
Q 007834 202 EFIGNLIADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVP 281 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~ 281 (588)
+.|++|+++|+.+++++|.|.+++|++++|++++++|++|+++|.||||++++++|+++++||+|+++|++|++++++.+
T Consensus 210 ~~i~~liaeAv~~Vg~~g~i~v~~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~~~~l~~ 289 (600)
T PLN03167 210 YEVGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIG 289 (600)
T ss_pred HHHHHHHHHHHHHhccCCcEEeccCCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCCHHHHHH
Confidence 99999999999999998999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCc
Q 007834 282 LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSD 361 (588)
Q Consensus 282 ~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~ 361 (588)
+++++.+.++||||++++|+++++++|+.|+++|..+|+|||+|+||+.++++|+|||++|||++++++.|+++++++++
T Consensus 290 ~le~i~~~g~~lvI~a~~I~~~aL~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~ 369 (600)
T PLN03167 290 ILEDAIRGGYPLLIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKE 369 (600)
T ss_pred HHHHHHHhCcCEEEEcCCCCHHHHHHHHHhhccccceEEEEEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888889999999
Q ss_pred cceeEEEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHH
Q 007834 362 QLGIARKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLR 441 (588)
Q Consensus 362 ~lG~~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~ 441 (588)
+||+|++|++.++.++++++.++++.+++|+.+|+..++.+.++|++++|++|+++|++++++|+|||+|+.+++|+||+
T Consensus 370 ~LG~a~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~ 449 (600)
T PLN03167 370 VLGTAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLR 449 (600)
T ss_pred HCceeeEEEEecccceeeCCCccHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc-C
Q 007834 442 IEDAKNATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-S 520 (588)
Q Consensus 442 i~DAl~~~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~-~ 520 (588)
++||++++|+++++|+|||||++|++|+.+|++++..+.+.+|+++++++++||+.||++||+|||+|+.+++++|++ .
T Consensus 450 i~DAl~avk~ai~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~ 529 (600)
T PLN03167 450 VEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSND 529 (600)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhcC
Confidence 999999999999999999999999999999999887778888888899999999999999999999999999999984 4
Q ss_pred CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 521 DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 521 ~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
++++|||+.+|++.||++.|||||+.||+++|+.|+++|++||++|++|+.+ |+++.
T Consensus 530 ~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~~A~~~A~~iL~iD~iI~~~-~~~~~ 586 (600)
T PLN03167 530 NPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDCVVVEI-KEPEP 586 (600)
T ss_pred CCCEeEeCCCCcCcchHhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCC
Confidence 6789999999999999999999999999999999999999999999999987 65544
No 4
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=9.8e-112 Score=938.90 Aligned_cols=534 Identities=48% Similarity=0.756 Sum_probs=512.1
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
.+++.||.+++..+++|+..++++|+|||||+||+|||++ .|+++|||||+||+++|+++||.+|+||+|++++|++||
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd 82 (541)
T PRK12851 3 AKEVKFHVEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVASKTN 82 (541)
T ss_pred cceecccHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHhhh
Confidence 5788999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li 208 (588)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|+++.+++.++|++|+++++.+++++
T Consensus 83 ~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~~~~l~~va~~s~~~~~~l~~lv 162 (541)
T PRK12851 83 DVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTTNAEIAQVATISANGDAEIGRLV 162 (541)
T ss_pred HhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred HHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhc
Q 007834 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (588)
Q Consensus 209 ~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~ 288 (588)
++|+..++++|.|.++.+....+++++++|++|+++|.||||.++.++|+++++||+|+++|+++++.+++.++++++.+
T Consensus 163 ~~Av~~vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i~~ 242 (541)
T PRK12851 163 AEAMEKVGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKISNLQDLLPVLEAVVQ 242 (541)
T ss_pred HHHHHHhcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcCcHHHHHHHHHHHHH
Confidence 99999999888887765544444459999999999999999999988999999999999999999999999999999999
Q ss_pred CCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEE
Q 007834 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARK 368 (588)
Q Consensus 289 ~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~ 368 (588)
+++||||++++|+++|+++|..|+++|.++|+|||+|+||+.++++|+|||++|||++++++.+++++++++++||+|+.
T Consensus 243 ~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~~ 322 (541)
T PRK12851 243 SGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGRAKK 322 (541)
T ss_pred hCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCCccE
Confidence 99999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred EEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 007834 369 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 448 (588)
Q Consensus 369 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~ 448 (588)
|++++++|+++++++++++++.|+++|+++++.+.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+++
T Consensus 323 v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~a 402 (541)
T PRK12851 323 VVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDALHA 402 (541)
T ss_pred EEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeEEc
Q 007834 449 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNA 528 (588)
Q Consensus 449 ~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gid~ 528 (588)
+|+++++|+|||||++|++|+.+|++++.. .+. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+
T Consensus 403 ~~~al~~g~VpGGGa~e~~~s~~L~~~~~~-~~~-~~~~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~G~d~ 480 (541)
T PRK12851 403 TRAAVEEGIVPGGGVALLRAVKALDKLETA-NGD-QRTGVEIVRRALEAPVRQIAENAGAEGSVVVGKLREKPGGYGFNA 480 (541)
T ss_pred HHHHHHcCcccCchHHHHHHHHHHHHHhcC-CcH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCeeeeC
Confidence 999999999999999999999999998864 454 569999999999999999999999999999999998777899999
Q ss_pred cCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCCCCCCCCCC
Q 007834 529 MTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPGI 586 (588)
Q Consensus 529 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~~~~~~~~~ 586 (588)
.+|+++||++.|||||+.+|.++|+.|+++|++||++|++|+.+ |+..+.+|+.||=
T Consensus 481 ~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~iL~id~iI~~~-~~~~~~~~~~~~~ 537 (541)
T PRK12851 481 ATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLLLTTEAMVAEK-PKKEPAPPAPPGG 537 (541)
T ss_pred CCCCccchhhccCEecHHHHHHHHHHHHHHHHHHHhHHHhhhcC-CCCCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999998 8777778888873
No 5
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.3e-111 Score=938.36 Aligned_cols=526 Identities=46% Similarity=0.727 Sum_probs=506.4
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
.|++.||.+++..+++|+..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||++|+||+|++++|++||
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~~qd 82 (544)
T PRK12850 3 AKEIRFSTDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASKTN 82 (544)
T ss_pred cceecccHHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHhhhc
Confidence 5789999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li 208 (588)
+++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|++++.|+++.++|.++|++|+++++.+++++
T Consensus 83 ~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~lv 162 (544)
T PRK12850 83 DLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTSSKEIAQVATISANGDESIGEMI 162 (544)
T ss_pred chhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred HHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhc
Q 007834 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (588)
Q Consensus 209 ~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~ 288 (588)
++|+..++++|.|.++.+....+++++++|++|+++|.||||+++.++|+++++||+|+++|+++++.+++.++++++.+
T Consensus 163 ~eAv~~vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~l~~i~~ 242 (544)
T PRK12850 163 AEAMDKVGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKISNLQDLLPILEAVVQ 242 (544)
T ss_pred HHHHHHhcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEecccCCHHHHHHHHHHHHH
Confidence 99999999888888876665666669999999999999999999888899999999999999999999999999999999
Q ss_pred CCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEE
Q 007834 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARK 368 (588)
Q Consensus 289 ~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~ 368 (588)
+|+||||++++|+++++++|..|+++|.++++|||+|+|++.++++|+|||++|||++++++.|++++++++++||+|+.
T Consensus 243 ~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~ 322 (544)
T PRK12850 243 SGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLGRAKR 322 (544)
T ss_pred hCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred EEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 007834 369 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 448 (588)
Q Consensus 369 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~ 448 (588)
|++++++|++++++++++.++.|+++|+++++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||+++
T Consensus 323 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~~ 402 (544)
T PRK12850 323 VLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHA 402 (544)
T ss_pred EEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeEEc
Q 007834 449 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNA 528 (588)
Q Consensus 449 ~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gid~ 528 (588)
+|+++++|+|||||++|++|+..|+++ ++..+. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+
T Consensus 403 ~k~a~~~g~VpGGGa~e~~~s~~L~~~-~~~~~~-~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~d~ 480 (544)
T PRK12850 403 TRAAVEEGIVPGGGVALLRARSALRGL-KGANAD-ETAGIDIVRRALEEPLRQIATNAGFEGSVVVGKVAELPGNFGFNA 480 (544)
T ss_pred HHHHHhcCCccCCcHHHHHHHHHHHhc-cCCChH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCcceeC
Confidence 999999999999999999999999988 455555 569999999999999999999999999999999998777899999
Q ss_pred cCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 529 MTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 529 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
.+|++.||++.|||||+.||.++|++|+++|++||++|++|+.+ |+..+
T Consensus 481 ~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~-~~~~~ 529 (544)
T PRK12850 481 QTGEYGDMVEAGIIDPAKVTRTALQDAASIAALLITTEAMVAEA-PKKAA 529 (544)
T ss_pred CCCcccchhhccCcccHHHHHHHHHHHHHHHHHHHhHHHhhccC-CCCCC
Confidence 99999999999999999999999999999999999999999997 86544
No 6
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=4.4e-111 Score=937.05 Aligned_cols=529 Identities=49% Similarity=0.754 Sum_probs=509.9
Q ss_pred hcccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHH
Q 007834 47 RAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVAS 125 (588)
Q Consensus 47 ~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~ 125 (588)
++..+++.+|.+++..+++||..|+++|+|||||+||+|||++ .|+++|||||+||+|+|+++||++|+||+|++++|+
T Consensus 11 ~~~~~~~~~~~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~ 90 (555)
T PTZ00114 11 RFKGKEIRFGDEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVAS 90 (555)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHH
Confidence 5667789999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHH
Q 007834 126 KMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIG 205 (588)
Q Consensus 126 ~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~ 205 (588)
+||+++||||||+||||++||+++.+++++|+||..|++||++|++.++++|++++.|+++.++|.++|+||+++++.++
T Consensus 91 ~qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~ 170 (555)
T PTZ00114 91 KTNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKTKEDILNVATISANGDVEIG 170 (555)
T ss_pred hhccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHcCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHH
Q 007834 206 NLIADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEK 285 (588)
Q Consensus 206 ~li~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~ 285 (588)
+++++|+.+++++|.|.++.|++++|++++++|++|+++|.||||+++.++|+++++||+|+++|++|++++++.+++++
T Consensus 171 ~li~eAv~~vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~~~~~i~~~le~ 250 (555)
T PTZ00114 171 SLIADAMDKVGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKISSIQSILPILEH 250 (555)
T ss_pred HHHHHHHHHhCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCCCHHHHHHHHHH
Confidence 99999999999989999999999999988999999999999999999988999999999999999999999999999999
Q ss_pred HhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeecc-CCCcccCCCCccce
Q 007834 286 TTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGE-LGLTLAGATSDQLG 364 (588)
Q Consensus 286 i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~-~~~~l~~l~~~~lG 364 (588)
+.+.|+||||++++|+++|+++|..|+++|.++|+|||+|++|+.++++|+|||++|||+++++. .+..++++++++||
T Consensus 251 i~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG 330 (555)
T PTZ00114 251 AVKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLG 330 (555)
T ss_pred HHHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999976 66777899999999
Q ss_pred eEEEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHH
Q 007834 365 IARKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIED 444 (588)
Q Consensus 365 ~~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~D 444 (588)
+|++|+++++++++++++++++.|+.|+++|+.+++.+.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++|
T Consensus 331 ~a~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~D 410 (555)
T PTZ00114 331 SAKKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIED 410 (555)
T ss_pred CCceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccCCchHHHHHHHhhhhhhc--CCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc-CC
Q 007834 445 AKNATFAAMDEGIVPGGGATYVHLLEHIPIIKN--SMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-SD 521 (588)
Q Consensus 445 Al~~~r~al~~gvvpGGGa~e~~ls~~L~~~~~--~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~-~~ 521 (588)
|+|++|+++++|+|||||++|++||.+|++++. ..++. +++++++|++||+.||++||+|||+|+.+++++|++ .+
T Consensus 411 al~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~-~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~ 489 (555)
T PTZ00114 411 ALNATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPD-QRTGVKIVRNALRLPTKQIAENAGVEGAVVVEKILEKKD 489 (555)
T ss_pred HHHHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCC
Confidence 999999999999999999999999999998874 34555 569999999999999999999999999999999987 57
Q ss_pred CceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCC
Q 007834 522 WRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 577 (588)
Q Consensus 522 ~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~ 577 (588)
+++|||+.+|++.||++.|||||+.||+++|++|+++|++||++|++|+.. |++.
T Consensus 490 ~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~-~~~~ 544 (555)
T PTZ00114 490 PSFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAASVASLMLTTEAAIVDL-PKEK 544 (555)
T ss_pred CCEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHHHHHHHHhHHHHHHhC-Cccc
Confidence 789999999999999999999999999999999999999999999999997 6553
No 7
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=6.1e-111 Score=934.84 Aligned_cols=526 Identities=47% Similarity=0.738 Sum_probs=507.1
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
..|++.||.+++..+++|+..|+++|+|||||+||+|||++ .|+++|||||+||+++|+++||++|+||+|++++|++|
T Consensus 2 ~~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~q 81 (545)
T PRK12852 2 AAKDVKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKT 81 (545)
T ss_pred CcchhhccHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhhc
Confidence 35889999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (588)
|+++||||||+||||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++.+++.++|++|+++++.++++
T Consensus 82 ~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~l 161 (545)
T PRK12852 82 NDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASSAEIAQVGTISANGDAAIGKM 161 (545)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHhhhcCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHh
Q 007834 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (588)
Q Consensus 208 i~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~ 287 (588)
+++|+.+++++|.|.++.|++..+.+++++|+.|+++|.||||++++++|+++++||+|+++|++|++++++.++++++.
T Consensus 162 i~eA~~~vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~i~~~~~i~~~l~~i~ 241 (545)
T PRK12852 162 IAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKKLSGLQAMLPVLEAVV 241 (545)
T ss_pred HHHHHHHhccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCccCCHHHHHHHHHHHH
Confidence 99999999999999999999885555999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEE
Q 007834 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (588)
Q Consensus 288 ~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~ 367 (588)
++++||||++++|+++|+++|..|+++|.++|+|||+|+|++.++++|+|||++|||++++++.|++++++++++||+|+
T Consensus 242 ~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG~~~ 321 (545)
T PRK12852 242 QSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLGRAK 321 (545)
T ss_pred HhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 007834 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 447 (588)
Q Consensus 368 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~ 447 (588)
.|+++++++++++++++++.++.|+++|+.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||+|
T Consensus 322 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~ 401 (545)
T PRK12852 322 KVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALN 401 (545)
T ss_pred EEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC-CCceeE
Q 007834 448 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-DWRFGY 526 (588)
Q Consensus 448 ~~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~-~~~~Gi 526 (588)
++|+++++|+|||||++|++|+++|.+++.. .+. +++++++|++||+.||++||+|||+|+.+++++|++. ++++||
T Consensus 402 a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~-~~~-~q~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G~ 479 (545)
T PRK12852 402 ATRAAVQEGIVPGGGVALLRAKKAVGRINND-NAD-VQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGF 479 (545)
T ss_pred HHHHHHhcCCCcCchHHHHHHHHHHHHhhcC-CcH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeE
Confidence 9999999999999999999999999998865 444 5699999999999999999999999999999999874 668999
Q ss_pred EccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCC
Q 007834 527 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 577 (588)
Q Consensus 527 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~ 577 (588)
|+.+|++.||++.|||||+.+|+++|++|+++|++||++|++|+.+ |+++
T Consensus 480 d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~iI~~~-~~~~ 529 (545)
T PRK12852 480 DAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAEL-PKKD 529 (545)
T ss_pred eCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHHHHhHHHHhhcC-CCCC
Confidence 9999999999999999999999999999999999999999999987 7663
No 8
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=1.6e-110 Score=927.46 Aligned_cols=521 Identities=55% Similarity=0.819 Sum_probs=503.9
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
|++.||.+++..+++|+..++++++|||||+||+|||++ .|+++|||||+||+|+|+++||++|+||+|++++|++||+
T Consensus 2 ~~~~~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~ 81 (524)
T TIGR02348 2 KQIKFDEEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKTND 81 (524)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHccCc
Confidence 678999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHHH
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLIA 209 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li~ 209 (588)
++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|++++.|+++.++|.++|+||++++++++++++
T Consensus 82 e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~lv~ 161 (524)
T TIGR02348 82 VAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKGKKEIAQVATISANNDEEIGSLIA 161 (524)
T ss_pred eeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred HHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhcC
Q 007834 210 DAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQL 289 (588)
Q Consensus 210 dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~~ 289 (588)
+|+..++++|.|.++.|+..+|++++++|++|+++|.||+|.++.++|+++++||+|+++|+++++++++.++++++.++
T Consensus 162 ~A~~~v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~i~~~l~~i~~~ 241 (524)
T TIGR02348 162 EAMEKVGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKISNIKDLLPLLEKVAQS 241 (524)
T ss_pred HHHHHhCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCcCCHHHHHHHHHHHHHh
Confidence 99999999898999889888776699999999999999999998889999999999999999999999999999999999
Q ss_pred CCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEE
Q 007834 290 SVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKV 369 (588)
Q Consensus 290 ~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v 369 (588)
|+||||++++|+++|+++|..|+++|+++|+|||+|++++.|+++|+|||++|||++++++.|++++++++++||+|+.|
T Consensus 242 g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v 321 (524)
T TIGR02348 242 GKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAKKV 321 (524)
T ss_pred CcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred EEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 007834 370 TVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNAT 449 (588)
Q Consensus 370 ~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~ 449 (588)
+++++++++++++++++.+..|+++|+.+++++.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+|++
T Consensus 322 ~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~~~ 401 (524)
T TIGR02348 322 TVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALNAT 401 (524)
T ss_pred EEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeEEcc
Q 007834 450 FAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNAM 529 (588)
Q Consensus 450 r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gid~~ 529 (588)
|+++++|+|||||++|++|+.+|.+ +.+.++. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+.
T Consensus 402 r~a~~~g~VpGGGa~e~~~s~~L~~-~~~~~~~-~~~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~d~~ 479 (524)
T TIGR02348 402 RAAVEEGIVPGGGVALLRAAAALEG-LKGDNED-EAIGIDIVKRALEAPLRQIAENAGKDGAVVAEKVKESKGNFGFNAA 479 (524)
T ss_pred HHHHhcCCccCCcHHHHHHHHHHHH-hccCChH-HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCeeEeCc
Confidence 9999999999999999999999998 6555665 4699999999999999999999999999999999875445999999
Q ss_pred CCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCC
Q 007834 530 TGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIK 574 (588)
Q Consensus 530 ~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p 574 (588)
+|++.||++.|||||+.||.++|++|+++|++||++|++|.+. |
T Consensus 480 ~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~ii~~~-~ 523 (524)
T TIGR02348 480 TGEYEDLVEAGIIDPTKVTRSALQNAASIAGLLLTTEAVVADK-P 523 (524)
T ss_pred CCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhcC-C
Confidence 9999999999999999999999999999999999999999876 5
No 9
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=1.4e-110 Score=929.02 Aligned_cols=523 Identities=50% Similarity=0.797 Sum_probs=503.2
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
.|++.||.++|+++++||..++++|+|||||+||+|||++ .|+++|||||+||+|+|+++||++++|++|++++|.+|+
T Consensus 2 ~~~~~~~~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~~~ 81 (529)
T CHL00093 2 SKKILYQDNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTN 81 (529)
T ss_pred CceeecCHHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHhcC
Confidence 4788999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li 208 (588)
+++||||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|++++.|+++.++|.+||++|+++++.|++|+
T Consensus 82 ~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d~~~L~~VA~ts~~~~~~l~~lv 161 (529)
T CHL00093 82 DVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVEDIQAITQVASISAGNDEEVGSMI 161 (529)
T ss_pred ceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccH-HhHHHHHHHHh
Q 007834 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTV-KEIVPLLEKTT 287 (588)
Q Consensus 209 ~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~-~~l~~~le~i~ 287 (588)
++|+.+++++|.|.++.|+..++.+++++|++|+++|.||||++++++|+.+++||+|+++|++|++. +++.++++++.
T Consensus 162 ~eAv~~vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~~i~~~l~~i~ 241 (529)
T CHL00093 162 ADAIEKVGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQDLLPILEQVT 241 (529)
T ss_pred HHHHHHhccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHHHHHHHHHHHH
Confidence 99999999889888887776666669999999999999999999988899999999999999999987 78999999999
Q ss_pred cCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEE
Q 007834 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (588)
Q Consensus 288 ~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~ 367 (588)
+.++||||++++|+++++++|+.|+++|+++|+|||+|++++.++++|+|||++|||++++++.|++++++++++||+|+
T Consensus 242 ~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~ 321 (529)
T CHL00093 242 KTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLGQAR 321 (529)
T ss_pred hcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 007834 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 447 (588)
Q Consensus 368 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~ 447 (588)
.|+++++++++++ .++++.+..||++++++++.+.++|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+|
T Consensus 322 ~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DAl~ 400 (529)
T CHL00093 322 RIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAIN 400 (529)
T ss_pred EEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHHHH
Confidence 9999999999998 667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCCchHHHHHHHhhhhhhc-CCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeE
Q 007834 448 ATFAAMDEGIVPGGGATYVHLLEHIPIIKN-SMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGY 526 (588)
Q Consensus 448 ~~r~al~~gvvpGGGa~e~~ls~~L~~~~~-~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gi 526 (588)
++|+++++|+|||||++|++||.+|+++++ +.++.+ ++++++|++||+.||++||+|||+|+.+++++|+..+.++||
T Consensus 401 a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~~-~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~ 479 (529)
T CHL00093 401 ATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKEDE-LIGALIVARAILAPLKRIAENAGKNGSVIIEKVQEQDFEIGY 479 (529)
T ss_pred HHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHccCCCEeE
Confidence 999999999999999999999999999876 566654 699999999999999999999999999999999887778999
Q ss_pred EccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCC
Q 007834 527 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQ 575 (588)
Q Consensus 527 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~ 575 (588)
|+.+|++.||++.|||||+.||.++|+.|+++|++||+||++|+.+ |+
T Consensus 480 d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~ii~~~-~~ 527 (529)
T CHL00093 480 NAANNKFVNMYEAGIIDPAKVTRSALQNAASIASMILTTECIIVDK-KE 527 (529)
T ss_pred ECCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 9999999999999999999999999999999999999999999997 75
No 10
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=7.1e-110 Score=924.12 Aligned_cols=525 Identities=47% Similarity=0.752 Sum_probs=505.1
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
+|++.||.+++..+++|+..++++|++||||+||+|||++ .|+++|||||+||+++|++++|++|+||+|++++|++||
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~qd 82 (546)
T PRK14104 3 AKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSA 82 (546)
T ss_pred cceecchHHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHhhc
Confidence 4788999999999999999999999999999999999999 999999999999999999998888889999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li 208 (588)
+++||||||+||||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++.+++.++|++|+++++.+++++
T Consensus 83 ~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~~~l~~va~~s~~~d~~i~~lv 162 (546)
T PRK14104 83 DAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFL 162 (546)
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887889999999999999999999
Q ss_pred HHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhc
Q 007834 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (588)
Q Consensus 209 ~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~ 288 (588)
++|+.+++++|.|.++.++++++++++++|++|+++|.||||+++++.++.+++||+|+++|.+++++++++++++++.+
T Consensus 163 ~~Av~~vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i~~ 242 (546)
T PRK14104 163 ADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAVVQ 242 (546)
T ss_pred HHHHHHhccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhhcCHHHHHHHHHHHHH
Confidence 99999999999999998888876669999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEE
Q 007834 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARK 368 (588)
Q Consensus 289 ~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~ 368 (588)
+|+||||++++|+++|+++|..|++++.++|+|||+|+||+.++++|+|||++|||++++++.|++++++++++||+|+.
T Consensus 243 ~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a~~ 322 (546)
T PRK14104 243 TGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRAKK 322 (546)
T ss_pred hCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999988888899999999999999
Q ss_pred EEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 007834 369 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 448 (588)
Q Consensus 369 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~ 448 (588)
|++++++++++++|++++.+++|+++|+.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||+|+
T Consensus 323 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~a 402 (546)
T PRK14104 323 VMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHA 402 (546)
T ss_pred EEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc-CCCceeEE
Q 007834 449 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-SDWRFGYN 527 (588)
Q Consensus 449 ~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~-~~~~~Gid 527 (588)
+++++++|+|||||++|++|+..|+++.. . +.++++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||
T Consensus 403 ~~~ai~~g~VpGGGa~e~~~s~~L~~~~~-~-~~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~~G~d 480 (546)
T PRK14104 403 TRAAVEEGIVPGGGVALLRASEQLKGIKT-K-NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFD 480 (546)
T ss_pred HHHHHHcCcCcCchHHHHHHHHHHHHhhc-C-ChHHHHHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcCCCcEeEe
Confidence 99999999999999999999999998743 3 345679999999999999999999999999999999987 46679999
Q ss_pred ccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCC
Q 007834 528 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 577 (588)
Q Consensus 528 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~ 577 (588)
+.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |++.
T Consensus 481 ~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~iL~id~~I~~~-~~~~ 529 (546)
T PRK14104 481 SQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAMVAEL-PKKG 529 (546)
T ss_pred CCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcCC
Confidence 999999999999999999999999999999999999999999987 8664
No 11
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=1.2e-109 Score=918.97 Aligned_cols=518 Identities=53% Similarity=0.807 Sum_probs=503.0
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
|++.||.+++..+++|+..++++++|||||+||+|||++ .|+++|||||+||+++|+++||.+++||+|++++|++||+
T Consensus 1 ~~~~~g~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~qd~ 80 (520)
T cd03344 1 KDIKFGEEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKTND 80 (520)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhhcc
Confidence 467899999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHHH
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLIA 209 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li~ 209 (588)
++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++.++|.++|+||+++++.++++++
T Consensus 81 e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ts~~~~~~l~~lv~ 160 (520)
T cd03344 81 VAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVKTKEEIAQVATISANGDEEIGELIA 160 (520)
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhcC
Q 007834 210 DAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQL 289 (588)
Q Consensus 210 dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~~ 289 (588)
+|+..++++|.|.++.|++++|++++++|++|+++|.||+|.+++++|+++++||+|+++|+++++++++.++++++.+.
T Consensus 161 ~A~~~v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l~~~~~l~~~l~~i~~~ 240 (520)
T cd03344 161 EAMEKVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKISSIQELLPILELVAKA 240 (520)
T ss_pred HHHHHhccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 99999998888999999999996699999999999999999998888999999999999999999999999999999999
Q ss_pred CCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEE
Q 007834 290 SVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKV 369 (588)
Q Consensus 290 ~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v 369 (588)
|+||||++++|+++|+++|..|++++.++++|||+|++++.++++|+|||.+|||++++++++.+++++++++||+|+.|
T Consensus 241 ~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~~v 320 (520)
T cd03344 241 GRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAKKV 320 (520)
T ss_pred CCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred EEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Q 007834 370 TVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNAT 449 (588)
Q Consensus 370 ~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~ 449 (588)
++++++++++++++++++++.|+++|+.+++++.++|++++|+||+++|+++.|||+|||+|+.+++|++|+++||+|++
T Consensus 321 ~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~~~ 400 (520)
T cd03344 321 VVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALNAT 400 (520)
T ss_pred EEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeEEcc
Q 007834 450 FAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNAM 529 (588)
Q Consensus 450 r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gid~~ 529 (588)
|+++++|+|||||++|++|+++|.+++. .++. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+.
T Consensus 401 k~a~~~g~VpGGGa~e~~~s~~L~~~~~-~~~~-~~~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~~~G~d~~ 478 (520)
T cd03344 401 RAAVEEGIVPGGGVALLRASPALDKLKA-LNGD-EKLGIEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPDGFGYDAA 478 (520)
T ss_pred HHHHhcCCCcCCcHHHHHHHHHHHHhcc-CChH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcCCEeEECC
Confidence 9999999999999999999999999986 5665 4699999999999999999999999999999999987669999999
Q ss_pred CCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhh
Q 007834 530 TGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLA 570 (588)
Q Consensus 530 ~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~ 570 (588)
+|++.||++.|||||+.+|.++|+.|+++|++||++|.+|.
T Consensus 479 ~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~iL~id~~i~ 519 (520)
T cd03344 479 TGEYVDMIEAGIIDPTKVVRSALQNAASVASLLLTTEALVV 519 (520)
T ss_pred CCcccchHhccCeecHHHHHHHHHHHHHHHHHHHhhheEEe
Confidence 99999999999999999999999999999999999999885
No 12
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-102 Score=821.33 Aligned_cols=526 Identities=49% Similarity=0.747 Sum_probs=514.8
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
++|++.||.++|..+++|++.||++|.+||||+||+++|.+ +|.|+|||||.|++++++++++++|+||+|+++++.++
T Consensus 15 ~ak~i~fg~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~t 94 (550)
T KOG0356|consen 15 YAKDIKFGKDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANNT 94 (550)
T ss_pred cccccccCHHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHHHHHhhc
Confidence 89999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (588)
++.+||||||+++|++++.+++.+-+.+|.+|.+|++|+++|.+.+++.|+++|+|+++++++.+||++|+++|.+++++
T Consensus 95 N~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSAngD~~ig~l 174 (550)
T KOG0356|consen 95 NEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISANGDKEIGNL 174 (550)
T ss_pred cCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHh
Q 007834 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (588)
Q Consensus 208 i~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~ 287 (588)
+.+|+++++++|+|+++.|.+++|++++++||.||+||+||||+++++++.++|++|++++.+.+|++++++.|.||...
T Consensus 175 i~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ivp~LE~A~ 254 (550)
T KOG0356|consen 175 ISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQSIVPALELAL 254 (550)
T ss_pred HHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHHHhHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCC-CcccCCCCccceeE
Q 007834 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELG-LTLAGATSDQLGIA 366 (588)
Q Consensus 288 ~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~-~~l~~l~~~~lG~~ 366 (588)
+...||||++++++.++|.+|+.|++++.++++|||+|+|||.|++.|.||+.+||+.++.++.+ +++++.++++||.+
T Consensus 255 ~~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~~dLG~~ 334 (550)
T KOG0356|consen 255 AKRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEELSTLNLEDAKLEDLGEV 334 (550)
T ss_pred hccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccchhhcccccCchhhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999988 88999999999999
Q ss_pred EEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Q 007834 367 RKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAK 446 (588)
Q Consensus 367 ~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl 446 (588)
++|.++++.++++.+.+++.+++.||+|++..++.+.++|++++++||+++|++++++|.|+|.|+.|++|++++++|||
T Consensus 335 ~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dal 414 (550)
T KOG0356|consen 335 GEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDAL 414 (550)
T ss_pred eeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeE
Q 007834 447 NATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGY 526 (588)
Q Consensus 447 ~~~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gi 526 (588)
+++++++++|+|||||+++++|+..|.+... ..+-+++.|++++.+||..|..+|++|||.|+..++.|++. ..+||
T Consensus 415 nat~aaveeGivpGGG~all~~~~~l~~lk~-~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~--~~~gy 491 (550)
T KOG0356|consen 415 NATRAAVEEGIVPGGGTALLRAIPVLDELKA-TNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN--DDYGY 491 (550)
T ss_pred HHHHHHhhcCcccCCchHHHHhhhhhhhccc-ccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh--hhhhh
Confidence 9999999999999999999999999998875 45566788999999999999999999999999999999994 49999
Q ss_pred EccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 527 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 527 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
|..+++++||++.||+||+.|.+++|..|..+|+++++++.+|... |++++
T Consensus 492 da~~~ey~dlv~~GiidP~kVvr~al~~a~~vasll~tte~vvtei-pk~~~ 542 (550)
T KOG0356|consen 492 DAAKGEYVDLVEAGIIDPTKVVRTALTDAAGVASLLTTTEAVVTEI-PKEEA 542 (550)
T ss_pred hhhcccHHHHHhccCCChHHHHHHhhhhhhHHHHHHhhheeEEEec-ccccc
Confidence 9999999999999999999999999999999999999999999998 88763
No 13
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3.1e-93 Score=784.13 Aligned_cols=452 Identities=22% Similarity=0.324 Sum_probs=416.4
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.....|.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+ ++|++++|++||+
T Consensus 5 ~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----a~l~~~~a~~qd~ 80 (484)
T cd03342 5 AEVLRRGQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQHPT----ASMIARAATAQDD 80 (484)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHHhhh
Confidence 356788999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC---CHHHHHHHHHHhcCCc-----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT---GRDDIKAVASISAGND----- 201 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~---~~~~l~~va~ts~~~~----- 201 (588)
++||||||++||+++|++++.+++++|+||..|++||++|.+.+++.|++++.+++ +.+.|.++|++|++++
T Consensus 81 ~~GDGTTt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~l~~va~ts~~sk~~~~~ 160 (484)
T cd03342 81 ITGDGTTSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRELLLSVARTSLRTKLHADL 160 (484)
T ss_pred HhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCcccchhH
Confidence 99999999999999999999999999999999999999999999999999999997 7889999999999885
Q ss_pred -hhHHHHHHHHHHHhccCC-c-----E--EEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 202 -EFIGNLIADAIIKIGADG-V-----I--LIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 202 -~~l~~li~dA~~~v~~~g-~-----I--~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
+.|++++++|+..+++++ . | ....|+++.|+ ++++|++|+++|.||+ |+++++||+|++++++
T Consensus 161 ~~~l~~l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds-~~i~G~~~~~~~~~~~-------m~~~~~n~~Ill~~~~ 232 (484)
T cd03342 161 ADQLTEIVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDT-KLIRGLVLDHGARHPD-------MPKRVENAYILTCNVS 232 (484)
T ss_pred HHHHHHHHHHHHHHHhhcCCccChhHeEEEEecCCChhhc-eEEeeEEEecCCCCCC-------CCccccCceEEEEeCC
Confidence 899999999999998765 2 2 33578999998 9999999999999997 5788999999999999
Q ss_pred cccHHh-HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccC
Q 007834 273 ISTVKE-IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGEL 351 (588)
Q Consensus 273 i~~~~~-l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~ 351 (588)
++..+. +... ...+||||+++|++.++++|.+|+ |+|||+ +++++|+|||++|||++++
T Consensus 233 le~~~~~~~~~------~~~~lvi~~~~I~~~al~~l~~~~------I~av~~-----~~~~~l~~ia~~tGa~ii~--- 292 (484)
T cd03342 233 LEYEKTEVNSG------FFYSVVINQKGIDPPSLDMLAKEG------ILALRR-----AKRRNMERLTLACGGVAMN--- 292 (484)
T ss_pred CCCCccccCcE------EEEEEEEeCCCccHHHHHHHHHCC------CeEEEe-----CCHHHHHHHHHHhCCEEec---
Confidence 987654 2211 124699999999999999999885 588885 4588999999999999999
Q ss_pred CCcccCCCCccceeEEEE---EEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEec
Q 007834 352 GLTLAGATSDQLGIARKV---TVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVG 428 (588)
Q Consensus 352 ~~~l~~l~~~~lG~~~~v---~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~ 428 (588)
+++++++++||+|+.| ++++++|+++++|+++ +.+||+||
T Consensus 293 --~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~-----------------------------------~~~tI~lr 335 (484)
T cd03342 293 --SVDDLSPECLGYAGLVYERTLGEEKYTFIEGVKNP-----------------------------------KSCTILIK 335 (484)
T ss_pred --ccccCChhhCcccceEEEEEECCeEEEEEECCCCC-----------------------------------cEEEEEEe
Confidence 7999999999999999 4678899999998754 48999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcC
Q 007834 429 AHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAG 507 (588)
Q Consensus 429 G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG 507 (588)
|+|+.+++|.+|+++||++++|+++++| +||||||+|++|+.+|+++++...+.+ ++++++|++||+.||++||+|||
T Consensus 336 g~t~~~l~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~-~~~i~~~a~Al~~ip~~La~NaG 414 (484)
T cd03342 336 GPNDHTITQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKA-KLGVQAFADALLVIPKTLAENSG 414 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHH-HHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999 999999999999999999987766665 69999999999999999999999
Q ss_pred CChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCC
Q 007834 508 VDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADK 572 (588)
Q Consensus 508 ~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~ 572 (588)
+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.+|+++|++|+++|++|||||++|+.+
T Consensus 415 ~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ID~ii~~~ 483 (484)
T cd03342 415 LDVQETLVKLQDEYAEGGQVGGVDLDTGEPMDPESEGIWDNYSVKRQILHSATVIASQLLLVDEIIRAG 483 (484)
T ss_pred CCHHHHHHHHHHHHHccCCceeeeCCCCcccchhhcCcEEcHHHHHHHHHHHHHHHHHHhhhhHhhhcC
Confidence 9999999999853 5679999999999999999999999999999999999999999999999764
No 14
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.8e-93 Score=790.14 Aligned_cols=471 Identities=20% Similarity=0.317 Sum_probs=424.8
Q ss_pred cccccchhHHhhcccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhh
Q 007834 36 RNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIEN 114 (588)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~ 114 (588)
||++.|+.+..+....++.+|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~hP~-- 78 (526)
T cd03339 1 DEYGRPFIIVREQEKKKRLKGLEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDHQI-- 78 (526)
T ss_pred CCCCCCeEEecCCCccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccCHH--
Confidence 466767543433323468999999999999999999999999999999999999 99999999999999999999997
Q ss_pred HHhHHHHHHHHhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC----CHHHH
Q 007834 115 AGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT----GRDDI 190 (588)
Q Consensus 115 ~~akLl~~~a~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~~~l 190 (588)
|+|++++|++||+++||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|++ +.+.|
T Consensus 79 --akll~~~a~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l 156 (526)
T cd03339 79 --AKLLVELSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNKEPL 156 (526)
T ss_pred --HHHHHHHHHhhhhhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999885 57789
Q ss_pred HHHHHHhcCCc------hhHHHHHHHHHHHhccC-------CcEEE--ecCCCcccceeeeeceEEeeccCCcccccccc
Q 007834 191 KAVASISAGND------EFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQE 255 (588)
Q Consensus 191 ~~va~ts~~~~------~~l~~li~dA~~~v~~~-------g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~ 255 (588)
.++|+||++++ +.|++++++|+..+.+. ..|++ ..|++++|| ++++|++|+++|.||+
T Consensus 157 ~~ia~tsl~sk~~~~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS-~~v~Givi~~~~~~~~------ 229 (526)
T cd03339 157 IQTAMTSLGSKIVSRCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDT-KLVKGIVIDKDFSHPQ------ 229 (526)
T ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHc-ceeeeEEEecccCCCC------
Confidence 99999998863 78999999999988531 22333 689999999 9999999999999997
Q ss_pred cccccccceeEEEecccc-------------ccHHh-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHH
Q 007834 256 KSLVEFDNAKVLITDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMN 311 (588)
Q Consensus 256 ~~~~~~~n~~Ill~d~~i-------------~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n 311 (588)
|++.++||||+++++++ +++++ +.++++++.+.|++|||++++|+++|+++|.+|
T Consensus 230 -m~~~~~n~kI~ll~~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~ 308 (526)
T cd03339 230 -MPKEVKDAKIAILTCPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQN 308 (526)
T ss_pred -CCceecCCCEEEEEecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHC
Confidence 56678899999998764 34444 556788999999999999999999999999987
Q ss_pred hhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---e--cceEEEEeCCCChH
Q 007834 312 KIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---K--SNSTTIVADPYTKA 386 (588)
Q Consensus 312 ~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~--~~~~~~i~g~~~~~ 386 (588)
++ .|||+++ +.+|+|||++|||++++ +++++++++||+|+.|++ + +++++++++|+++
T Consensus 309 ~I------~av~~v~-----~~~LerIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~- 371 (526)
T cd03339 309 GL------PAVRWVG-----GVEIELIAIATGGRIVP-----RFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNS- 371 (526)
T ss_pred CC------EEEEeCC-----HHHHHHHHHHhCCEEec-----chhhCChhhcccCceEEEEEecCCCcEEEEEECCCCC-
Confidence 64 6888755 78899999999999999 799999999999999984 2 4688999988754
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHH
Q 007834 387 EIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATY 465 (588)
Q Consensus 387 ~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e 465 (588)
+.+||+|||+|+.+++|.+|+++||++++|+++++| +|||||++|
T Consensus 372 ----------------------------------~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e 417 (526)
T cd03339 372 ----------------------------------KAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAE 417 (526)
T ss_pred ----------------------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHH
Confidence 479999999999999999999999999999999998 999999999
Q ss_pred HHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc-----CCCceeEEccCCcccccccCc
Q 007834 466 VHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYEDLLSAG 540 (588)
Q Consensus 466 ~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~-----~~~~~Gid~~~g~i~d~~~~g 540 (588)
|+|+.+|+++++...+.+ ++++++|++||+.||++|++|||+|+.+++++|+. .+.++|||+.+|++.||++.|
T Consensus 418 ~~ls~~l~~~~~~~~~~~-~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~g 496 (526)
T cd03339 418 ISCSLAVEKAADKCSGIE-QYAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQK 496 (526)
T ss_pred HHHHHHHHHHhccCCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcC
Confidence 999999999887777765 69999999999999999999999999999999973 255799999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHchhHHhh
Q 007834 541 VADPCRVARCALQNAVSIAAVVLTTEAVLA 570 (588)
Q Consensus 541 I~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~ 570 (588)
||||+.+|+++|+.|+++|++|||||++|.
T Consensus 497 V~dp~~vk~~~l~~A~e~a~~iL~iD~ii~ 526 (526)
T cd03339 497 VFETLISKKQQILLATQVVKMILKIDDVIV 526 (526)
T ss_pred ceecHHHHHHHHHHHHHHHHHHhhhceecC
Confidence 999999999999999999999999999873
No 15
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.1e-92 Score=786.14 Aligned_cols=461 Identities=23% Similarity=0.329 Sum_probs=418.9
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.+...|.+++..|+.||..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||+ ++|++++|++||+
T Consensus 9 ~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~hP~----a~ll~~~a~~qd~ 84 (531)
T TIGR02347 9 AESLRRDAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQHPT----ASMIARAATAQDD 84 (531)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHHhhh
Confidence 457788999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCccc---CCHHHHHHHHHHhcCC------
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPV---TGRDDIKAVASISAGN------ 200 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v---~~~~~l~~va~ts~~~------ 200 (588)
++||||||+|||+++||+++.+++++|+||..|++||+.|++.++++|++++.++ .+.+.|.++|+|++++
T Consensus 85 ~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~ 164 (531)
T TIGR02347 85 ITGDGTTSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDRELLLNVARTSLRTKLPIDL 164 (531)
T ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhccccchhh
Confidence 9999999999999999999999999999999999999999999999999999664 4788899999999875
Q ss_pred chhHHHHHHHHHHHhccCCc------EEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 201 DEFIGNLIADAIIKIGADGV------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~g~------I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
+++|++++++|+..+++++. |.+ ..|++..|+ ++++|++|+++|.||+ |+++++||+|++++++
T Consensus 165 ~~~ls~iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds-~~v~Giv~~~~~~~~~-------~~~~~~n~~Ill~~~~ 236 (531)
T TIGR02347 165 ADQLTEIVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDT-TLIRGLVLDHGARHPD-------MPRRVKNAYILTCNVS 236 (531)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCChhHeEEEEecCCCcccc-EEEeeEEEecCcCCCC-------CceeccCceEEEEeCC
Confidence 68999999999999987653 333 478899998 9999999999999997 5778999999999998
Q ss_pred cccHH-------------h-----------HHHHHHHHhcCC-------CC---EEEEecCCchHHHHHHHHHhhhccce
Q 007834 273 ISTVK-------------E-----------IVPLLEKTTQLS-------VP---LLIIAEDISSQVLETLVMNKIRGLLN 318 (588)
Q Consensus 273 i~~~~-------------~-----------l~~~le~i~~~~-------~~---lvI~~~~i~~~al~~L~~n~l~g~~~ 318 (588)
++..+ + +..+++++.+.+ ++ ||+|+++|++.++++|.+++
T Consensus 237 le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~~------ 310 (531)
T TIGR02347 237 LEYEKTEVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKEG------ 310 (531)
T ss_pred CCCCccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHCC------
Confidence 75332 2 234556666654 14 99999999999999998865
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEE---EEecceEEEEeCCCChHHHHHHHHHH
Q 007834 319 VAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKV---TVKSNSTTIVADPYTKAEIQARIMQI 395 (588)
Q Consensus 319 i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v---~~~~~~~~~i~g~~~~~~i~~ri~~l 395 (588)
|++++++ ++.+|+|||++|||++++ +++++++++||+|+.| .+++++|++|++|+++
T Consensus 311 I~~i~rv-----~~~~le~ia~~tGa~~i~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~---------- 370 (531)
T TIGR02347 311 IMALRRA-----KRRNMERLTLACGGEALN-----SVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNP---------- 370 (531)
T ss_pred ceEEccC-----CHHHHHHHHHHhCCEEec-----ccccCCccccccceEEEEEEECCeEEEEEEcCCCC----------
Confidence 5787754 488999999999999998 7999999999999999 5678899999998764
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhh
Q 007834 396 KKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPI 474 (588)
Q Consensus 396 ~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~ 474 (588)
+.|||+|||+|+.+++|++|+++||++++|+++++| +||||||+|++|+.+|++
T Consensus 371 -------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~ 425 (531)
T TIGR02347 371 -------------------------KSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKE 425 (531)
T ss_pred -------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999 999999999999999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHH
Q 007834 475 IKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARC 550 (588)
Q Consensus 475 ~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~ 550 (588)
+++..++.+ ++++++|++||+.||++||+|||+|+.+++.+|++. +.++|+|+.+|++.||++.|||||+.+|++
T Consensus 426 ~~~~~~~~~-~~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gV~Dp~~vk~~ 504 (531)
T TIGR02347 426 EKKSVKGKA-KLGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEVVGVDLETGEPIDPEIKGIWDNYRVKKQ 504 (531)
T ss_pred HhhcCCCHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeeeccCCCccchhhccCEEcHHHHHH
Confidence 987776765 689999999999999999999999999999999763 357999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHchhHHhhCCCCCC
Q 007834 551 ALQNAVSIAAVVLTTEAVLADKIKQP 576 (588)
Q Consensus 551 ~l~~A~e~a~~lL~iD~iI~~~~p~~ 576 (588)
+|++|+++|++|||||++|+.+ |..
T Consensus 505 al~~A~e~a~~iLrID~ii~~~-~~~ 529 (531)
T TIGR02347 505 LIQSATVIASQLLLVDEVMRAG-RSM 529 (531)
T ss_pred HHHHHHHHHHHHHhHHHHHhCc-ccc
Confidence 9999999999999999999987 753
No 16
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-92 Score=786.98 Aligned_cols=474 Identities=22% Similarity=0.327 Sum_probs=428.2
Q ss_pred eecccccchhHHhhcccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccch
Q 007834 34 LWRNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTI 112 (588)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~ 112 (588)
+|+++|.|+.+..+....+...|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~hP~ 82 (532)
T TIGR02343 3 AFDEYGRPFIIIKDQDKKKRLKGLEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDNPI 82 (532)
T ss_pred cccccCCCchhhccccccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCCHH
Confidence 68888888654444334568899999999999999999999999999999999999 99999999999999999999998
Q ss_pred hhHHhHHHHHHHHhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC----CHH
Q 007834 113 ENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT----GRD 188 (588)
Q Consensus 113 ~~~~akLl~~~a~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~~ 188 (588)
|+|++++|++||+++||||||+|||+++||+++.+|+++|+||..|++||++|++.++++|++++++++ +.+
T Consensus 83 ----akll~~~a~~qd~~~GDGTttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~ 158 (532)
T TIGR02343 83 ----AKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNKE 158 (532)
T ss_pred ----HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999875 367
Q ss_pred HHHHHHHHhcCC------chhHHHHHHHHHHHhccC-------CcEE--EecCCCcccceeeeeceEEeeccCCcccccc
Q 007834 189 DIKAVASISAGN------DEFIGNLIADAIIKIGAD-------GVIL--IESSSSFETSIVVEEGMKIDKGYLSPQFITN 253 (588)
Q Consensus 189 ~l~~va~ts~~~------~~~l~~li~dA~~~v~~~-------g~I~--v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~ 253 (588)
.|.++|+|++++ .+.|++++++|+..+... +.|+ ...|++++|+ ++++|++|+++|.||+
T Consensus 159 ~l~~ia~t~l~sK~~~~~~~~ls~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds-~~v~Gi~i~~~~~~~~---- 233 (532)
T TIGR02343 159 PLIQAAKTSLGSKIVSKCHRRFAEIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDT-KLIKGIIIDKDFSHPQ---- 233 (532)
T ss_pred HHHHHHHHhhccchhhHHHHHHHHHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccc-eeEeeEEEecCcCCCC----
Confidence 899999999875 367899999999988531 1233 3589999999 9999999999999997
Q ss_pred cccccccccceeEEEecccc-------------ccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHH
Q 007834 254 QEKSLVEFDNAKVLITDQKI-------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLV 309 (588)
Q Consensus 254 ~~~~~~~~~n~~Ill~d~~i-------------~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~ 309 (588)
|++.++||||+++++++ ++++++ .++++++++.|++||||+++|++.++++|.
T Consensus 234 ---m~~~~~n~kI~l~~~~le~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~ 310 (532)
T TIGR02343 234 ---MPKEVKDAKIAILTCPFEPPKPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLL 310 (532)
T ss_pred ---CCeeecCCcEEEEEeeccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHH
Confidence 56778899999998763 455555 567899999999999999999999999999
Q ss_pred HHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ec--ceEEEEeCCCC
Q 007834 310 MNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KS--NSTTIVADPYT 384 (588)
Q Consensus 310 ~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~--~~~~~i~g~~~ 384 (588)
+|++ .+||+++ +.+|+|||++|||++++ +++++++++||+|+.|+. +. ++++++++|++
T Consensus 311 ~~~i------~~v~~~~-----~~~l~~Ia~~tGa~~i~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~ 374 (532)
T TIGR02343 311 QNDL------PAVRWVG-----GHELELIAIATGGRIVP-----RFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKN 374 (532)
T ss_pred HCCc------EEEEcCC-----HHHHHHHHHHhCCEEec-----ccccCCHhHCcccceEEEEEecCCcceEEEEECCCC
Confidence 8864 6787665 78899999999999999 799999999999999984 23 57899998876
Q ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCch
Q 007834 385 KAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGA 463 (588)
Q Consensus 385 ~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa 463 (588)
+ ..+||+|||+|+.+++|.+|+++||++++|++++++ +||||||
T Consensus 375 ~-----------------------------------~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa 419 (532)
T TIGR02343 375 S-----------------------------------KAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGA 419 (532)
T ss_pred C-----------------------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCH
Confidence 4 379999999999999999999999999999999996 9999999
Q ss_pred HHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc-----CCCceeEEccCCccccccc
Q 007834 464 TYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYEDLLS 538 (588)
Q Consensus 464 ~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~-----~~~~~Gid~~~g~i~d~~~ 538 (588)
+||+|+++|+++++++.+.+ ++++++|++||+.||++||+|||+|+.+++++|++ .+.++|+|+.+|++.||++
T Consensus 420 ~e~~ls~~l~~~~~~~~~~~-~~~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~ 498 (532)
T TIGR02343 420 AEISCSLAVSQEADKYSGVE-QYAIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKE 498 (532)
T ss_pred HHHHHHHHHHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchh
Confidence 99999999999987777766 68999999999999999999999999999999984 2567999999999999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHchhHHhhC
Q 007834 539 AGVADPCRVARCALQNAVSIAAVVLTTEAVLAD 571 (588)
Q Consensus 539 ~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~ 571 (588)
.|||||+.+|+++|+.|+++|++||+||++|..
T Consensus 499 ~gV~Dp~~vk~~al~~A~e~a~~iL~id~ii~~ 531 (532)
T TIGR02343 499 QGVFETLIGKKQQIQLATQLVRMILKIDDVISP 531 (532)
T ss_pred ccCeecHHHHHHHHHHHHHHHHHHHhHhhhccC
Confidence 999999999999999999999999999999953
No 17
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=3.5e-92 Score=783.10 Aligned_cols=457 Identities=26% Similarity=0.405 Sum_probs=420.4
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
..+..+|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+|+|+++||. |+|++++|++||
T Consensus 8 ~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~qd 83 (519)
T TIGR02339 8 GTQRTKGRDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQD 83 (519)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHHHH
Confidence 3457788999999999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCCc-----
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND----- 201 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~~----- 201 (588)
+++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +.+.|.++|+||++++
T Consensus 84 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~L~~ia~tsl~sk~~~~~ 163 (519)
T TIGR02339 84 AEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEV 163 (519)
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHHHHHHHHhhhccccccch
Confidence 999999999999999999999999999999999999999999999999999999986 3688999999999875
Q ss_pred --hhHHHHHHHHHHHhcc---CCc-------EEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEE
Q 007834 202 --EFIGNLIADAIIKIGA---DGV-------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVL 267 (588)
Q Consensus 202 --~~l~~li~dA~~~v~~---~g~-------I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Il 267 (588)
+.|++++++|+.++++ +|. |++ +.|++++|| ++++|++|+++|.||. |+++++||+|+
T Consensus 164 ~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~vi~~~~~~~~-------m~~~i~n~kIl 235 (519)
T TIGR02339 164 TKDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDT-ELVEGIVVDKEPVHPG-------MPKRVKNAKIA 235 (519)
T ss_pred hHHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcc-eeEeeEEEecCCCCCC-------CccccCCCcEE
Confidence 7899999999999975 453 334 689999998 9999999999999984 78899999999
Q ss_pred Eeccc-------------cccHHhHHHHHH-----------HHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEee
Q 007834 268 ITDQK-------------ISTVKEIVPLLE-----------KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVK 323 (588)
Q Consensus 268 l~d~~-------------i~~~~~l~~~le-----------~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk 323 (588)
+++++ +++++++.++++ ++++.|++|||++++|++.++++|.+++ +.+|+
T Consensus 236 ll~~~Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~g------I~~v~ 309 (519)
T TIGR02339 236 LLDAPLEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKAG------ILAVR 309 (519)
T ss_pred EEeccccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHCC------CEEEe
Confidence 99998 567777766554 8999999999999999999999997654 36665
Q ss_pred CCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHh
Q 007834 324 CPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLA 400 (588)
Q Consensus 324 ~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~ 400 (588)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 310 -----~v~~~~L~rIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~--------------- 364 (519)
T TIGR02339 310 -----RVKKSDIEKLARATGAKIVS-----SIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNP--------------- 364 (519)
T ss_pred -----cCCHHHHHHHHHHhCCEEeC-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC---------------
Confidence 55599999999999999999 7889999999999999874 4889999988654
Q ss_pred hhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCC
Q 007834 401 ATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSM 479 (588)
Q Consensus 401 ~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 479 (588)
..+||+|||+|+.+++|.+|+++||++++|+++++| +||||||+||+|+.+|+++++..
T Consensus 365 --------------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~ 424 (519)
T TIGR02339 365 --------------------KAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKI 424 (519)
T ss_pred --------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcC
Confidence 379999999999999999999999999999999999 99999999999999999988766
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHHHH
Q 007834 480 EDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNA 555 (588)
Q Consensus 480 ~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A 555 (588)
.+.+ ++++++|++||+.||++|++|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+.+|+++|+.|
T Consensus 425 ~~~~-~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A 503 (519)
T TIGR02339 425 GGRE-QLAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEKGNKNAGINVFTGEIEDMLELGVIEPLRVKEQAIKSA 503 (519)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeEEcCCCCccchhhccceEcHHHHHHHHHHH
Confidence 6665 68999999999999999999999999999999974 356899999999999999999999999999999999
Q ss_pred HHHHHHHHchhHHhh
Q 007834 556 VSIAAVVLTTEAVLA 570 (588)
Q Consensus 556 ~e~a~~lL~iD~iI~ 570 (588)
+++|++||+||++|+
T Consensus 504 ~e~a~~iL~id~ii~ 518 (519)
T TIGR02339 504 TEAATMILRIDDVIA 518 (519)
T ss_pred HHHHHHHHhHhHHhh
Confidence 999999999999986
No 18
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.5e-92 Score=783.34 Aligned_cols=458 Identities=24% Similarity=0.397 Sum_probs=422.4
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.+..+|.+++..|++||..+++++++||||+||+|||++ .|+++|||||+||+++|+++||. |+|++++|++||+
T Consensus 8 ~~~~~~~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~ 83 (517)
T cd03343 8 TQRTSGRDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQDE 83 (517)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 357789999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCCc------
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND------ 201 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~~------ 201 (588)
++||||||+|||+++|++++.+++++|+||..|++||++|.+.+++.|++++.+++ +.+.|.++|+||++++
T Consensus 84 ~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~va~ts~~sk~~~~~~ 163 (517)
T cd03343 84 EVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTSLTGKGAEAAK 163 (517)
T ss_pred HhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhhcccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999986 7889999999999976
Q ss_pred hhHHHHHHHHHHHhccCCc---------EEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 202 EFIGNLIADAIIKIGADGV---------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~~g~---------I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
+.|++++++|+.++++++. |++ +.|++++|| ++++|++|+++|.||+ |+++++||+|++++
T Consensus 164 ~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~v~~~~~~~~~-------m~~~~~n~~Illl~ 235 (517)
T cd03343 164 DKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDT-ELIRGIVIDKEVVHPG-------MPKRVENAKIALLD 235 (517)
T ss_pred HHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHc-ceeeeEEEeccCCCCC-------CccccCCCcEEEEe
Confidence 8999999999999977532 666 689999998 9999999999999997 56789999999999
Q ss_pred ccc-------------ccHHhHHH-----------HHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCC
Q 007834 271 QKI-------------STVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (588)
Q Consensus 271 ~~i-------------~~~~~l~~-----------~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~ 326 (588)
+++ ++++++.+ +++++++.|++|||++++|+++|+++|.+++ +++|+
T Consensus 236 ~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~g------I~~v~--- 306 (517)
T cd03343 236 APLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKAG------ILAVR--- 306 (517)
T ss_pred ccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCC------cEEEE---
Confidence 984 66666654 4558999999999999999999999998653 46776
Q ss_pred CCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhhh
Q 007834 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATD 403 (588)
Q Consensus 327 ~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~ 403 (588)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+++++|+++
T Consensus 307 --~v~~~~l~~Ia~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~------------------ 361 (517)
T cd03343 307 --RVKKSDMEKLARATGAKIVT-----NIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNP------------------ 361 (517)
T ss_pred --eCCHHHHHHHHHHhCCEEec-----chhhCChhhCCccceEEEEEECCeEEEEEEcCCCC------------------
Confidence 45599999999999999999 7899999999999999864 8889999988764
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCCh
Q 007834 404 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDP 482 (588)
Q Consensus 404 ~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~ 482 (588)
..+||+|||+|+.+++|.+|+++||++++|+++++| +|||||++||+++.+|++++....+.
T Consensus 362 -----------------~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~~ 424 (517)
T cd03343 362 -----------------KAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGGR 424 (517)
T ss_pred -----------------ceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCCH
Confidence 368999999999999999999999999999999999 99999999999999999987766665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHHHHHHH
Q 007834 483 DEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSI 558 (588)
Q Consensus 483 eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~ 558 (588)
+ ++++++|++||+.||++|++|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+.+|+++|++|+|+
T Consensus 425 ~-~~~~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~ 503 (517)
T cd03343 425 E-QLAVEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEKGNKNAGLDVYTGEVVDMLEKGVIEPLRVKKQAIKSATEA 503 (517)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHH
Confidence 5 68999999999999999999999999999999984 356799999999999999999999999999999999999
Q ss_pred HHHHHchhHHhhCC
Q 007834 559 AAVVLTTEAVLADK 572 (588)
Q Consensus 559 a~~lL~iD~iI~~~ 572 (588)
|++||+||++|+.+
T Consensus 504 a~~iL~id~ii~~~ 517 (517)
T cd03343 504 ATMILRIDDVIAAK 517 (517)
T ss_pred HHHHHhhhHhhhCC
Confidence 99999999999753
No 19
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.3e-92 Score=785.44 Aligned_cols=462 Identities=24% Similarity=0.331 Sum_probs=417.5
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhc
Q 007834 53 ILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLA 131 (588)
Q Consensus 53 ~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~~ 131 (588)
...|.+++..|++||..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||+++
T Consensus 3 ~~~~~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~q~~~~ 78 (527)
T cd03335 3 RTSGQDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDKEV 78 (527)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccChH----HHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999 99999999999999999999997 999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHh-cCcccC--CHHHHHHHHHHhcCC------ch
Q 007834 132 GDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVT--GRDDIKAVASISAGN------DE 202 (588)
Q Consensus 132 GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~~~l~~va~ts~~~------~~ 202 (588)
||||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|++ +++|++ +.+.|.++|+|++++ .+
T Consensus 79 GDGTTt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~ 158 (527)
T cd03335 79 GDGTTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSD 158 (527)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhcccccchhHH
Confidence 999999999999999999999999999999999999999999999996 899987 788899999999873 48
Q ss_pred hHHHHHHHHHHHhcc---CCc-------EE--EecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 203 FIGNLIADAIIKIGA---DGV-------IL--IESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 203 ~l~~li~dA~~~v~~---~g~-------I~--v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
.|++++++|+..++. +|. |+ ...|++++|+ ++++|++|+++|.||. |+++++||+|++++
T Consensus 159 ~ls~l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s-~li~Givi~~~~~~~~-------m~~~i~n~kIlll~ 230 (527)
T cd03335 159 FFANMVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKES-YLVNGYALNCTRASQG-------MPTRVKNAKIACLD 230 (527)
T ss_pred HHHHHHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhc-ceeeeEEEecccCCCC-------CcccccCCcEEEEe
Confidence 999999999999952 232 22 4589999998 9999999999999984 78899999999999
Q ss_pred cccccH-------------Hh-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCC
Q 007834 271 QKISTV-------------KE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (588)
Q Consensus 271 ~~i~~~-------------~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~ 326 (588)
++++.. ++ +.++++++.+.|++|||++++|++.++++|.++. +++++
T Consensus 231 ~~Le~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~~------I~~v~--- 301 (527)
T cd03335 231 FNLQKTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEAG------AMAVR--- 301 (527)
T ss_pred ccCCCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCC------cEEEE---
Confidence 997542 22 2356788889999999999999999999998864 47776
Q ss_pred CCCChhHHHHHHHHHhCCeEeeccCCC-cccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007834 327 FGDGKKALLQDIALMTGADFLSGELGL-TLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAAT 402 (588)
Q Consensus 327 ~~~~~~~~Le~ia~~tG~~ii~~~~~~-~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~ 402 (588)
++++.+|+|||++|||+++++..++ ..+++++++||+|+.|+ +++++|++|++|+++
T Consensus 302 --~v~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~~----------------- 362 (527)
T cd03335 302 --RVKKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKKR----------------- 362 (527)
T ss_pred --eCCHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCCC-----------------
Confidence 5559999999999999999954333 12445667899999999 678899999988653
Q ss_pred hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCC
Q 007834 403 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMED 481 (588)
Q Consensus 403 ~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~ 481 (588)
++|||+|||+|+.+++|.+|+++||++++++++++| +|||||++||+|+.+|+++++...+
T Consensus 363 ------------------~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~ 424 (527)
T cd03335 363 ------------------SSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGS 424 (527)
T ss_pred ------------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhccCc
Confidence 589999999999999999999999999999999999 9999999999999999999877766
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC------------CCceeEEccCCcccccccCccccchHHHH
Q 007834 482 PDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGRYEDLLSAGVADPCRVAR 549 (588)
Q Consensus 482 ~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~------------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~ 549 (588)
.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.+|+
T Consensus 425 ~~-~~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~~k~ 503 (527)
T cd03335 425 RE-QLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLINGKVRDNLEAGVLEPTVSKI 503 (527)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCceEeEECCCCcccchhhccceecHHHHH
Confidence 65 599999999999999999999999999999999762 34799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHchhHHhhCCCC
Q 007834 550 CALQNAVSIAAVVLTTEAVLADKIK 574 (588)
Q Consensus 550 ~~l~~A~e~a~~lL~iD~iI~~~~p 574 (588)
++|+.|+|+|++|||||++|..+ |
T Consensus 504 ~~i~~A~e~a~~iLrID~ii~~~-~ 527 (527)
T cd03335 504 KSLKFATEAAITILRIDDLIKLN-P 527 (527)
T ss_pred HHHHHHHHHHHHHHhhcceeecC-C
Confidence 99999999999999999999876 5
No 20
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.1e-91 Score=781.06 Aligned_cols=464 Identities=24% Similarity=0.332 Sum_probs=419.5
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~ 130 (588)
+...|.+++..|++||..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||++
T Consensus 6 ~~~~~~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~qd~~ 81 (536)
T TIGR02340 6 ERTSGQDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDRE 81 (536)
T ss_pred ceecHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccChH----HHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999999999 99999999999999999999998 99999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhc-CcccC--CHHHHHHHHHHhcC------Cc
Q 007834 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQK-SFPVT--GRDDIKAVASISAG------ND 201 (588)
Q Consensus 131 ~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~-s~~v~--~~~~l~~va~ts~~------~~ 201 (588)
+||||||+|||+++||+++.+++++|+||..|++||+.|++.+++.|+++ ++|++ +.+.|.++|+|+++ ++
T Consensus 82 ~GDGTTt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~ 161 (536)
T TIGR02340 82 VGDGTTSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGREALINVAKTSMSSKIIGLDS 161 (536)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHHHHHHhccccchhhH
Confidence 99999999999999999999999999999999999999999999999975 88987 78889999999988 56
Q ss_pred hhHHHHHHHHHHHhc---cCCc-------EEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEe
Q 007834 202 EFIGNLIADAIIKIG---ADGV-------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (588)
Q Consensus 202 ~~l~~li~dA~~~v~---~~g~-------I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~ 269 (588)
+.|++++++|+..++ .+|. |++ +.|++++|+ ++++|++|+++|.||. |+++++||+|+++
T Consensus 162 ~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s-~~i~Gi~i~~~~~~~~-------m~~~~~n~kIli~ 233 (536)
T TIGR02340 162 DFFSNIVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARES-YLVKGYALNCTRASQQ-------MPKRIKKAKIACL 233 (536)
T ss_pred HHHHHHHHHHHHHHhcccccCccccchHHeEEEEecCCCcccc-EEEEEEEEecccCCCC-------CcceecCCcEEEE
Confidence 899999999999996 2342 333 689999887 9999999999999984 8889999999999
Q ss_pred ccccccHH-------------h-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCC
Q 007834 270 DQKISTVK-------------E-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (588)
Q Consensus 270 d~~i~~~~-------------~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~ 325 (588)
++++++.+ + +.+.++.+++.|++||+++++|++.++++|.++. ++++++
T Consensus 234 ~~~L~~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~~------I~~i~r- 306 (536)
T TIGR02340 234 DFNLQKQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEAG------AMGVRR- 306 (536)
T ss_pred ecCCCCCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCC------cEEEec-
Confidence 99975432 1 2356777889999999999999999999998875 477764
Q ss_pred CCCCChhHHHHHHHHHhCCeEeeccCCC-cccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhh
Q 007834 326 GFGDGKKALLQDIALMTGADFLSGELGL-TLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAA 401 (588)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG~~ii~~~~~~-~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~ 401 (588)
+++++|+|||++|||+++++..++ ..+++++++||+|+.|+ +++++|++|++++++
T Consensus 307 ----v~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~---------------- 366 (536)
T TIGR02340 307 ----CKKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGR---------------- 366 (536)
T ss_pred ----CCHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCC----------------
Confidence 458999999999999999965444 23456778899999999 688899999988654
Q ss_pred hhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCC
Q 007834 402 TDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSME 480 (588)
Q Consensus 402 ~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~ 480 (588)
.+|||+|||+|+.+++|++|+++||+|++|+++++| +|||||++|++|+.+|++++....
T Consensus 367 -------------------~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l~~~~~~~~ 427 (536)
T TIGR02340 367 -------------------KSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLG 427 (536)
T ss_pred -------------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHHHHHhhhCC
Confidence 489999999999999999999999999999999999 999999999999999998876666
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC------------CCceeEEccCCcccccccCccccchHHH
Q 007834 481 DPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGRYEDLLSAGVADPCRVA 548 (588)
Q Consensus 481 ~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~------------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk 548 (588)
+.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.+|
T Consensus 428 ~~~-~~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~Dp~~~k 506 (536)
T TIGR02340 428 SRE-QLAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHLKWYGLDLSNGKIRDNKEAGVLEPAVSK 506 (536)
T ss_pred Chh-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCcccccccCceEeEEccCCccccchhccceecHHHH
Confidence 654 699999999999999999999999999999999762 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHchhHHhhCCCCC
Q 007834 549 RCALQNAVSIAAVVLTTEAVLADKIKQ 575 (588)
Q Consensus 549 ~~~l~~A~e~a~~lL~iD~iI~~~~p~ 575 (588)
+++|+.|+|+|++|||||++|..+ |+
T Consensus 507 ~~~l~~A~e~a~~iL~ID~ii~~~-~~ 532 (536)
T TIGR02340 507 VKSLKFATEAAITILRIDDLIKLN-PE 532 (536)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhcC-CC
Confidence 999999999999999999999987 64
No 21
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-93 Score=782.80 Aligned_cols=499 Identities=43% Similarity=0.616 Sum_probs=426.0
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
+.+++.||.+||..|+.|++.|+++||+||||+||+|||++ .|+++|||||+||+|+|+++|| ||+|++++|++|
T Consensus 2 ~~~~~~~~~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeielehp----~akll~eva~~q 77 (524)
T COG0459 2 MGKERKFGEDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIELEHP----GAKLLVEVAKKQ 77 (524)
T ss_pred CcccccccHHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhccCc----hhHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999 8899999999999999999999 599999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHH-----HHHHHHHHhcCCch
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRD-----DIKAVASISAGNDE 202 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~-----~l~~va~ts~~~~~ 202 (588)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++++++.+ ...++++.++++++
T Consensus 78 d~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~~~~~t~v~sk~~~~~~ 157 (524)
T COG0459 78 DDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEELKIAITSVASKSANSDE 157 (524)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhheeeeeeccChH
Confidence 9999999999999999999999999999999999999999999999999999999998654 33444444555568
Q ss_pred hHHHHHHHHHHHhcc-----CCcEEEe-cCCCcccceeeeeceEEeeccCCccccccccccc-ccccceeEEEecccccc
Q 007834 203 FIGNLIADAIIKIGA-----DGVILIE-SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSL-VEFDNAKVLITDQKIST 275 (588)
Q Consensus 203 ~l~~li~dA~~~v~~-----~g~I~v~-~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~-~~~~n~~Ill~d~~i~~ 275 (588)
.+++++++|+.+++. ++++.++ .|++..|+ ++++||+||+||.+||| || ++++||||+++|++|++
T Consensus 158 ~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~-~vveG~~~dkg~~s~~~------~~~~~~e~~~Ili~d~~l~~ 230 (524)
T COG0459 158 EIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETEL-EVVEGMVFDKGYLSPYF------MPDKRLENPKILLLDKKLEI 230 (524)
T ss_pred HHHHHHHHHHHHhcccccccCCeEEEEecCCCccce-EEEeeEEecCCccCCCC------CCccccccceEEEEcccccc
Confidence 999999999999998 7777765 45555565 99999999999999997 66 78999999999999988
Q ss_pred HHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcc
Q 007834 276 VKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTL 355 (588)
Q Consensus 276 ~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l 355 (588)
.++.++ ++...+.+.+|+++++++..+++..++.|.+++..+++||+.|||+|.++..|+|++++|+.++..++.+
T Consensus 231 ~k~~l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~--- 306 (524)
T COG0459 231 KKPELP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLG--- 306 (524)
T ss_pred ccccCc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhH---
Confidence 877666 6666666667777777777677777777777777777777777777777777777777777777765432
Q ss_pred cCCCCccceeEEEEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHH
Q 007834 356 AGATSDQLGIARKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAAT-DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVE 434 (588)
Q Consensus 356 ~~l~~~~lG~~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~-~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~ 434 (588)
.....+|.|..|...++.+....|.+. ..++.+. .++|+++++++|.++ .+++|||+|||+|+.+
T Consensus 307 --~~l~~~~ga~~v~~~~d~t~~~~G~~~-----------~~~ve~~~~~~~~~~~~~~~~~~-~~~~~tI~vrgate~~ 372 (524)
T COG0459 307 --ERLAKLGGAKIVSVLKDLTTIVLGEGA-----------AGLVEETKTGDYDMEKLQERKAK-AGGVATILVRGATEVE 372 (524)
T ss_pred --HHHHHccCceEEeecccCceeecCccc-----------cceEEEeeccchhhhhhhhhhhc-CCCeEEEEECCccHhH
Confidence 134556666666665555555444320 1122333 567888999999988 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHH
Q 007834 435 LEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIV 513 (588)
Q Consensus 435 ~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~v 513 (588)
++|++|++||||+++|+++++| +|||||++|++++..|++++.+..+.++++++++|++||+.||++|++|||+||.++
T Consensus 373 ldE~er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~v 452 (524)
T COG0459 373 LDEKERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPIEV 452 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 9999999999999999999999 999999999999999999843333435679999999999999999999999999999
Q ss_pred HHhhhcCC--CceeEEccCCcc-cccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCC
Q 007834 514 VEKTRTSD--WRFGYNAMTGRY-EDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 577 (588)
Q Consensus 514 l~~l~~~~--~~~Gid~~~g~i-~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~ 577 (588)
+.+|++.+ +++|||+.+|++ .||++.|||||+.||+++|++|+++|.+|||+|++|..+ |+.+
T Consensus 453 ~~~L~~~~~~~~~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~A~e~a~llL~~d~iI~~~-~~~~ 518 (524)
T COG0459 453 LSKLRSAHATTNYGIDAFTGEYEDDMIEAGIIDPLKVKRSALKNAAEAAGLLLTIDDIIAAK-PEEK 518 (524)
T ss_pred HHHHHhcccCCccceeccCCccccchHhccCcChHHHHHHHHHHHHHHHHHHHHHHHhhccC-Cccc
Confidence 99999975 369999999999 789999999999999999999999999999999999998 8754
No 22
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.5e-91 Score=777.69 Aligned_cols=462 Identities=21% Similarity=0.319 Sum_probs=416.2
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhc
Q 007834 53 ILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLA 131 (588)
Q Consensus 53 ~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~~ 131 (588)
...|.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||+++
T Consensus 3 ~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hp~----a~ll~~~a~~q~~~~ 78 (515)
T cd03338 3 KEKPADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLHPA----AKMLVELSKAQDIEA 78 (515)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcCHH----HHHHHHHHHHHHhHh
Confidence 4567789999999999999999999999999999999 99999999999999999999998 999999999999999
Q ss_pred CCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------chh
Q 007834 132 GDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------DEF 203 (588)
Q Consensus 132 GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------~~~ 203 (588)
||||||+|||+++|++++.+++++|+||..|++||++|.+.++++|++++.+++ +.+.|.++|+||+++ ++.
T Consensus 79 GDGTtt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~l~~va~ts~~sK~~~~~~~~ 158 (515)
T cd03338 79 GDGTTSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRESLIKSATTSLNSKVVSQYSSL 158 (515)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHhccccchhhHHH
Confidence 999999999999999999999999999999999999999999999999999986 788999999999984 588
Q ss_pred HHHHHHHHHHHhccCCc----------EEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecccc
Q 007834 204 IGNLIADAIIKIGADGV----------ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKI 273 (588)
Q Consensus 204 l~~li~dA~~~v~~~g~----------I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i 273 (588)
|++++++|+.++++++. |..+.|++++|+ ++++|++|+++|.||++ ||+.++||+++++++++
T Consensus 159 ls~li~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds-~lv~Giv~~k~~~~~~~------~p~~i~n~ki~ll~~~l 231 (515)
T cd03338 159 LAPIAVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDT-ELVDGLVFTQKASKKAG------GPTRIEKAKIGLIQFCL 231 (515)
T ss_pred HHHHHHHHHHHhhcccccCcCCHHHeEEEEecCCChhhc-eeeeeEEEeccccCcCC------CCccccCCcEEEEeccc
Confidence 99999999999988653 555789999999 99999999999999863 46778999999988875
Q ss_pred cc-------------H-----------HhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCC
Q 007834 274 ST-------------V-----------KEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGD 329 (588)
Q Consensus 274 ~~-------------~-----------~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~ 329 (588)
+. . +++.++++++++.|++||||+++|+.++++.++.|.+++ .+|+||+ +
T Consensus 232 e~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~-~~I~av~-----~ 305 (515)
T cd03338 232 SPPKTDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVVK-----D 305 (515)
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHH-CCceEEe-----c
Confidence 32 2 234567889999999999999999544444444444443 5678887 5
Q ss_pred ChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHH
Q 007834 330 GKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAY 406 (588)
Q Consensus 330 ~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~ 406 (588)
+++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++++++.+
T Consensus 306 ~~~~~LerIa~~tGa~ii~-----sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~---------------------- 358 (515)
T cd03338 306 IEREEIEFICKTIGCKPVA-----SIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKN---------------------- 358 (515)
T ss_pred CCHHHHHHHHHHHCCEEec-----ccccCCHhhCCCCceEEEEEECCeEEEEEEecCC----------------------
Confidence 5699999999999999999 789999999999999986 3557888988753
Q ss_pred HHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhH
Q 007834 407 LSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQ 485 (588)
Q Consensus 407 e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~ 485 (588)
+++.|||+|||+|+.+++|++|+++||++++++++++| +||||||+|++|+++|++++++..+.+ +
T Consensus 359 ------------~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~-~ 425 (515)
T cd03338 359 ------------PGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWARTLTGVE-Q 425 (515)
T ss_pred ------------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhccCCcHH-H
Confidence 13589999999999999999999999999999999999 999999999999999999877666655 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHH
Q 007834 486 IGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAV 561 (588)
Q Consensus 486 ~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~ 561 (588)
+++++|++||+.||++|++|||+|+.+++++|++ .+.++|||+.+|++.||++.|||||+.+|++++++|+++|++
T Consensus 426 ~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~ 505 (515)
T cd03338 426 YCVRAFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNAGINVRKGAITNILEENVVQPLLVSTSAITLATETVRM 505 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCccceeccCCCccchhhcCceecHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999987 366899999999999999999999999999999999999999
Q ss_pred HHchhHHhhC
Q 007834 562 VLTTEAVLAD 571 (588)
Q Consensus 562 lL~iD~iI~~ 571 (588)
||+||++|+.
T Consensus 506 iL~ID~ii~~ 515 (515)
T cd03338 506 ILKIDDIVLA 515 (515)
T ss_pred HhccchhhcC
Confidence 9999999863
No 23
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.4e-91 Score=773.95 Aligned_cols=460 Identities=21% Similarity=0.298 Sum_probs=420.4
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.+...|.+++..|+.||..|+++++|||||+||+|||++ .|+++|||||+|||++|+++||+ |+|++++|++||+
T Consensus 9 ~~~~~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----akll~~~a~~q~~ 84 (525)
T TIGR02344 9 TKRESGRKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAHPA----AKSMIELSRTQDE 84 (525)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHhhhh
Confidence 457788999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------c
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------D 201 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------~ 201 (588)
++||||||+|+|+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +.+.|.++|+|++++ +
T Consensus 85 ~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~ 164 (525)
T TIGR02344 85 EVGDGTTSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAAMLKLIQSCIGTKFVSRWS 164 (525)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHhhccccchhHH
Confidence 99999999999999999999999999999999999999999999999999999987 677899999988765 5
Q ss_pred hhHHHHHHHHHHHhccCC-----------cEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEE
Q 007834 202 EFIGNLIADAIIKIGADG-----------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~~g-----------~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 268 (588)
+.|++++++|+..+++++ .|++ .+|++++|| ++++|++|++++.|+. |+++++||+|++
T Consensus 165 ~~ls~l~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS-~lv~Gvvi~k~~~~~~-------m~~~~~n~kIll 236 (525)
T TIGR02344 165 DLMCDLALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDS-CVLKGVMINKDVTHPK-------MRRYIENPRIVL 236 (525)
T ss_pred HHHHHHHHHHHHHhhccccCCCCccChhhceEEEEecCCChHhc-CcccceEEecccCCCC-------CccccCCCCEEE
Confidence 899999999999997643 1344 479999998 9999999999988863 888999999999
Q ss_pred ecccccc-------------HHhHHHH-----------HHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeC
Q 007834 269 TDQKIST-------------VKEIVPL-----------LEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKC 324 (588)
Q Consensus 269 ~d~~i~~-------------~~~l~~~-----------le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~ 324 (588)
++++++. ++++.++ ++++.+.|++|||++++|++.++++|.+++ |+|++
T Consensus 237 l~~~Le~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~~------I~av~- 309 (525)
T TIGR02344 237 LDCPLEYKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKAN------ISAIR- 309 (525)
T ss_pred EecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCC------ceEEe-
Confidence 9999754 3555544 447888999999999999999999887754 57765
Q ss_pred CCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCcccee-EEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHh
Q 007834 325 PGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLA 400 (588)
Q Consensus 325 ~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~-~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~ 400 (588)
++++++|+|||++|||++++ +++++++++||+ |+.|++ ++++|++|++|+++
T Consensus 310 ----~v~~~~LerIa~~tGa~ii~-----~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~--------------- 365 (525)
T TIGR02344 310 ----RVRKTDNNRIARACGATIVN-----RPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDP--------------- 365 (525)
T ss_pred ----cCCHHHHHHHHHHhCCeEec-----chhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCC---------------
Confidence 66699999999999999999 789999999999 998886 56889999988654
Q ss_pred hhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCC
Q 007834 401 ATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSM 479 (588)
Q Consensus 401 ~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 479 (588)
..|||+|||+|+.+++|.||+++||+++++++++++ +||||||+||+||.+|++++++.
T Consensus 366 --------------------~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~ 425 (525)
T TIGR02344 366 --------------------KACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKL 425 (525)
T ss_pred --------------------CEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcC
Confidence 379999999999999999999999999999999996 99999999999999999988777
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC-----CCceeEEccCCcccccccCccccchHHHHHHHHH
Q 007834 480 EDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQN 554 (588)
Q Consensus 480 ~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~ 554 (588)
.+.+ ++++++|++||+.||++||+|||+|+.+++++|++. +.++|+|+.+|++.||++.|||||+.+|+++|+.
T Consensus 426 ~~~~-~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~ 504 (525)
T TIGR02344 426 EGVQ-QWPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGIDGETGKIVDMKEKGIWEPLAVKLQTYKT 504 (525)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEECCCCccccchhccceecHHHHHHHHHH
Confidence 7765 599999999999999999999999999999999872 4679999999999999999999999999999999
Q ss_pred HHHHHHHHHchhHHhhCCCCC
Q 007834 555 AVSIAAVVLTTEAVLADKIKQ 575 (588)
Q Consensus 555 A~e~a~~lL~iD~iI~~~~p~ 575 (588)
|+++|++|||||++|..+ |+
T Consensus 505 A~e~a~~iL~id~ii~~~-~~ 524 (525)
T TIGR02344 505 AIESACMLLRIDDIVSGV-KK 524 (525)
T ss_pred HHHHHHHHHhhhHHhhcC-CC
Confidence 999999999999999887 74
No 24
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.3e-91 Score=771.93 Aligned_cols=464 Identities=21% Similarity=0.332 Sum_probs=413.8
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
|+...+.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||+
T Consensus 2 ~~~~~~~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~~~a~~qd~ 77 (517)
T TIGR02342 2 QDKDKPTDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIHPA----AKMLVELSKAQDI 77 (517)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccChH----HHHHHHHHHHHHH
Confidence 345667788999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------c
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------D 201 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------~ 201 (588)
++||||||+|+|+++||+++.+|+++|+||+.|++||++|++.++++|+++++|++ +.+.|.++|+||+++ .
T Consensus 78 ~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~ 157 (517)
T TIGR02342 78 EAGDGTTSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREILIKSATTSLSSKVVSQYS 157 (517)
T ss_pred HhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHHHHHHHHHHhccccchhHH
Confidence 99999999999999999999999999999999999999999999999999999987 788899999999875 3
Q ss_pred hhHHHHHHHHHHHhcc---CCc-----EEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecc
Q 007834 202 EFIGNLIADAIIKIGA---DGV-----ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~---~g~-----I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~ 271 (588)
+.|++++++|+..+++ ++. |.+ ..|+++.|+ ++++|++|+++|.|+. +||+.++||+|+++++
T Consensus 158 ~~ls~l~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds-~li~Givl~k~~~~~~------~mpk~i~n~kI~ll~~ 230 (517)
T TIGR02342 158 SLLAPLAVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDT-ELIEGLVFTQKASRSA------GGPTRIEKAKIGLIQF 230 (517)
T ss_pred HHHHHHHHHHHHHHhccccCCccCHHHeeEEeccCCChhhc-EEEeeEEEeccccccC------CCCccccCCcEEEEec
Confidence 6789999999999976 232 333 478899998 9999999999999842 3788899999999998
Q ss_pred ccc-------------cH-----------HhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCC
Q 007834 272 KIS-------------TV-----------KEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (588)
Q Consensus 272 ~i~-------------~~-----------~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~ 327 (588)
+++ +. +++.++++++++.|++||||+++|++++++.++.|.+.+ .+|+||+
T Consensus 231 ~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~-~~I~av~---- 305 (517)
T TIGR02342 231 QISPPKTDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAK-MKIMVVK---- 305 (517)
T ss_pred CCCCCcccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhh-CCceEEe----
Confidence 753 22 134567889999999999999999554444444444444 5678987
Q ss_pred CCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE-E--ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhh
Q 007834 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT-V--KSNSTTIVADPYTKAEIQARIMQIKKDLAATDN 404 (588)
Q Consensus 328 ~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~-~--~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~ 404 (588)
++++++|+|||++|||++++ +++++++++||+|+.|+ + +++.++++.++.++
T Consensus 306 -~v~~~~LerIa~~tGa~ii~-----~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~------------------- 360 (517)
T TIGR02342 306 -DIEREEVEFICKTIGCKPIA-----SIDHFTADKLGSAELVEEVTTDGGKIIKITGIQNA------------------- 360 (517)
T ss_pred -cCCHHHHHHHHHHHCCEEEc-----chhhcCcccCcCCceEEEEEECCeEEEEEEccCCC-------------------
Confidence 55599999999999999999 78999999999999998 3 45577788877542
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChh
Q 007834 405 AYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPD 483 (588)
Q Consensus 405 ~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~e 483 (588)
++++||+|||+|+.+++|.+|+++||+++++++++++ +||||||+||+|+.+|++++++..+.+
T Consensus 361 ---------------~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l~~~~~~~~~~~ 425 (517)
T TIGR02342 361 ---------------GKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKLSKLARTMKGVE 425 (517)
T ss_pred ---------------CceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHHHHHHhcCCcHH
Confidence 3689999999999999999999999999999999996 999999999999999999987767765
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHHHHHHHH
Q 007834 484 EQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 559 (588)
Q Consensus 484 q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 559 (588)
++++++|++||+.||++||+|||+|+.+++++|++ .+.++|+|+.+|+++||++.|||||+.+|+++|++|+++|
T Consensus 426 -~~~i~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~ai~~A~e~a 504 (517)
T TIGR02342 426 -SYCVRAFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYAGISVRKGGITDMLEEEVLQPLLVTTSAVTLASETV 504 (517)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCccceecCCCCccchhhccceEcHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999987 3668999999999999999999999999999999999999
Q ss_pred HHHHchhHHhhC
Q 007834 560 AVVLTTEAVLAD 571 (588)
Q Consensus 560 ~~lL~iD~iI~~ 571 (588)
++|||||++|+.
T Consensus 505 ~~iL~iD~ii~~ 516 (517)
T TIGR02342 505 RMILKIDDIVFT 516 (517)
T ss_pred HHHhcccceeec
Confidence 999999999865
No 25
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.8e-91 Score=772.48 Aligned_cols=460 Identities=21% Similarity=0.297 Sum_probs=417.9
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.....|.+++..|+.||..++++|+|||||+||+|||++ .| ++|||||+||+++|+++||+ |+|++++|++||+
T Consensus 11 ~~~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~hP~----a~ll~~~a~~q~~ 85 (522)
T TIGR02345 11 TDTSQGKGQLISNINACVAIAEILKTTLGPRGMDKLIVGKNG-ATVSNDGATILKLLDIVHPA----AKTLVDIAKSQDS 85 (522)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCC-cEEeCcHHHHHHHhcccChH----HHHHHHHHHHHHH
Confidence 347788999999999999999999999999999999999 88 99999999999999999998 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC-----CHHHHHHHHHHhcC-----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-----GRDDIKAVASISAG----- 199 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~~~l~~va~ts~~----- 199 (588)
++||||||+|||+++||+++.+++++|+||..|++||++|++.++++|+++++|++ +.+.|.++|+|+++
T Consensus 86 ~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~ 165 (522)
T TIGR02345 86 EVGDGTTSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIA 165 (522)
T ss_pred HhCCCchhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999997 55789999999987
Q ss_pred -CchhHHHHHHHHHHHhccCC----c--EEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 200 -NDEFIGNLIADAIIKIGADG----V--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 200 -~~~~l~~li~dA~~~v~~~g----~--I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
++++|++++++|+.++++++ . |....|++++|+ ++++|++|+++|.||+|.+ |+++++||+|++++++
T Consensus 166 ~~~~~l~~l~~~A~~~v~~~~~~~~~I~i~ki~Ggs~~ds-~~v~Giv~~~~~~~~~~~~----~~~~~~n~kIll~~~~ 240 (522)
T TIGR02345 166 HEKEFFSKMIVDAVLQLDIDDLDLKLIGVKKVQGGSLQDS-VLVNGVAFKKTFSYAGFEQ----QPKKFANPKILLLNVE 240 (522)
T ss_pred chHHHHHHHHHHHHHHHhhccCChhHheEEeecCCCHHhc-ceecceEEecccCcccccc----CCceeccceEEEEecC
Confidence 46899999999999998652 2 333489999999 8999999999999998743 6788999999999998
Q ss_pred cc-------------cHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCC
Q 007834 273 IS-------------TVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (588)
Q Consensus 273 i~-------------~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~ 328 (588)
++ +++++ .+.++.+.+.|+++|+|+++|++.++++|..+. |.+++
T Consensus 241 Le~~~~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~~------I~~~~----- 309 (522)
T TIGR02345 241 LELKAEKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADHN------IFCAG----- 309 (522)
T ss_pred cccCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHCC------cEEEe-----
Confidence 64 23232 345667888999999999999999999998765 46665
Q ss_pred CChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhH
Q 007834 329 DGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 405 (588)
Q Consensus 329 ~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~ 405 (588)
++.+.+|++++++|||++++ +++++++++||+|+.++. +++++++|+||+++
T Consensus 310 ~v~~~dl~ria~~tga~ii~-----~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~-------------------- 364 (522)
T TIGR02345 310 RVSDEDLKRVVKACGGSIQS-----TTSDLEADVLGTCALFEERQIGSERYNYFTGCPHA-------------------- 364 (522)
T ss_pred cCCHHHHHHHHHHhCCeEEc-----chhhCChhhccCCceEEEEEECCeEEEEEEcCCCC--------------------
Confidence 44589999999999999999 789999999999999985 46789999988553
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhh
Q 007834 406 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 484 (588)
Q Consensus 406 ~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq 484 (588)
.+|||+|||+|+.+++|++|+++||++++|++++++ +|||||++|++|+.+|+++++...+.+
T Consensus 365 ---------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~- 428 (522)
T TIGR02345 365 ---------------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREHSKKIDGKQ- 428 (522)
T ss_pred ---------------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHHhhCCCHH-
Confidence 489999999999999999999999999999999995 999999999999999999877666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHH
Q 007834 485 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAA 560 (588)
Q Consensus 485 ~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~ 560 (588)
++++++|++||+.||++||+|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+.||+++|++|+++|+
T Consensus 429 ~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~ 508 (522)
T TIGR02345 429 QLIIEAFAKALEIIPRSLCENAGFDSIEILNKLRSRHAKGGKWYGVDINTEDIGDNFENFVWEPLLVKKNALKAAFEAAC 508 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999987 35579999999999999999999999999999999999999
Q ss_pred HHHchhHHhhCC
Q 007834 561 VVLTTEAVLADK 572 (588)
Q Consensus 561 ~lL~iD~iI~~~ 572 (588)
+||+||++|+.+
T Consensus 509 ~iL~id~ii~~~ 520 (522)
T TIGR02345 509 TILSIDETIMNP 520 (522)
T ss_pred HHHhHHHHHhCC
Confidence 999999999764
No 26
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.1e-90 Score=767.68 Aligned_cols=458 Identities=21% Similarity=0.310 Sum_probs=417.5
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C--CCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S--DKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~--g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
+...|.+++..|+.||..++++++|||||+||+|||++ . |+++|||||+||+++|+++||. |+|++++|++||
T Consensus 7 ~~~~~~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~qd 82 (517)
T cd03336 7 QEEKGETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNPA----AKVLVDISKVQD 82 (517)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHHH
Confidence 46678899999999999999999999999999999999 5 9999999999999999999995 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC-----CHHHHHHHHHHhcCC---
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-----GRDDIKAVASISAGN--- 200 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~~~l~~va~ts~~~--- 200 (588)
+++||||||+|||+++||+++.+++++|+||..|++||++|.+.++++|+++++|++ +.+.|.++|+|++++
T Consensus 83 ~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~ 162 (517)
T cd03336 83 DEVGDGTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKIL 162 (517)
T ss_pred hHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999884 357899999988765
Q ss_pred ---chhHHHHHHHHHHHhccC---CcEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 201 ---DEFIGNLIADAIIKIGAD---GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 201 ---~~~l~~li~dA~~~v~~~---g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
++.|++|+++|+.++++. ..|.+ .+|++++|+ ++++|+++++++.++ |+++++||+|++++++
T Consensus 163 ~~~~~~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds-~l~~G~v~~~~~~~~--------~~~~~~n~kIli~~~~ 233 (517)
T cd03336 163 TQDKEHFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANTP 233 (517)
T ss_pred chhHHHHHHHHHHHHHHhhccCCccceeEEEccCCCccce-EEEeeEEEecccCCC--------CCCeeccccEEEEecC
Confidence 488999999999998632 23343 579999999 899999999987653 6788999999999998
Q ss_pred cc--------------cHHhHH-----------HHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCC
Q 007834 273 IS--------------TVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (588)
Q Consensus 273 i~--------------~~~~l~-----------~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~ 327 (588)
++ +++++. ++++.+.+.|++++++++.|++.++++|.+++ |+|||+|+
T Consensus 234 le~~~~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~~------I~av~~v~- 306 (517)
T cd03336 234 MDTDKIKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADAG------IMAIEHAD- 306 (517)
T ss_pred CCcccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCC------cEEEecCC-
Confidence 65 444442 34678899999999999999999999998765 58999887
Q ss_pred CCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhh
Q 007834 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDN 404 (588)
Q Consensus 328 ~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~ 404 (588)
+.+|+|||++|||++++ +++++++++||+|+.|+. +++++++|++|.++
T Consensus 307 ----~~~L~rIa~~tGa~ii~-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~------------------- 358 (517)
T cd03336 307 ----FDGVERLALVTGGEIAS-----TFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAAG------------------- 358 (517)
T ss_pred ----HHHHHHHHHHhCCEEec-----ccCCCCcccccccceEEEEEECCeEEEEEEccCCC-------------------
Confidence 67899999999999999 789999999999999974 57899999988643
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChh
Q 007834 405 AYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPD 483 (588)
Q Consensus 405 ~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~e 483 (588)
+.|||+|||+|+.+++|.+|+++||++++|+++++| +||||||+|++|+.+|++++++..+.+
T Consensus 359 ----------------~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~ 422 (517)
T cd03336 359 ----------------EACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELAKKTPGKK 422 (517)
T ss_pred ----------------ceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhhCCCHH
Confidence 589999999999999999999999999999999998 999999999999999999987776765
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHHHHHHHH
Q 007834 484 EQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 559 (588)
Q Consensus 484 q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 559 (588)
++++++|++||+.||++||+|||+|+.+++++|++ .+.++|||+.+|++.||++.|||||+.+|+++|+.|+++|
T Consensus 423 -~~~i~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a 501 (517)
T cd03336 423 -SLAIEAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYNGNTTAGLDMRKGTVGDMKELGITESFKVKRQVLLSASEAA 501 (517)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999987 3668999999999999999999999999999999999999
Q ss_pred HHHHchhHHhhCCCCC
Q 007834 560 AVVLTTEAVLADKIKQ 575 (588)
Q Consensus 560 ~~lL~iD~iI~~~~p~ 575 (588)
++||+||++|+.+ |+
T Consensus 502 ~~iL~id~ii~~~-~~ 516 (517)
T cd03336 502 EMILRVDDIIKCA-PR 516 (517)
T ss_pred HHHHhHhHHhhcC-CC
Confidence 9999999999997 74
No 27
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.5e-90 Score=770.52 Aligned_cols=460 Identities=23% Similarity=0.323 Sum_probs=420.4
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~ 130 (588)
+...|.+++..|+.+|..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||++
T Consensus 10 ~~~~~~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~~~ 85 (522)
T cd03340 10 DTSQGKGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHPA----AKTLVDIAKSQDAE 85 (522)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccCHH----HHHHHHHHHHhHhH
Confidence 36678899999999999999999999999999999999 99999999999999999999997 99999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCC------HHHHHHHHHHhcC-----
Q 007834 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG------RDDIKAVASISAG----- 199 (588)
Q Consensus 131 ~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~------~~~l~~va~ts~~----- 199 (588)
+||||||+|+|+++||+++.+++++|+||..|++||++|.+.+++.|+++++++++ .+.|.++|+|+++
T Consensus 86 ~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~ 165 (522)
T cd03340 86 VGDGTTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIA 165 (522)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcch
Confidence 99999999999999999999999999999999999999999999999999998864 5679999999987
Q ss_pred -CchhHHHHHHHHHHHhccCC---cEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecccc
Q 007834 200 -NDEFIGNLIADAIIKIGADG---VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKI 273 (588)
Q Consensus 200 -~~~~l~~li~dA~~~v~~~g---~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i 273 (588)
++++|++++++|+.++++++ .|++ ..|++++|| ++++|++|+++|.+|+|.+ |++.++||+|+++++++
T Consensus 166 ~~~~~l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds-~lv~Giv~~k~~~~~~~~~----~~~~~~n~kIll~~~~L 240 (522)
T cd03340 166 SEKEFFAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDS-QLVNGVAFKKTFSYAGFEQ----QPKKFKNPKILLLNVEL 240 (522)
T ss_pred hHHHHHHHHHHHHHHHhcccCChhHheEeeecCCChhhc-eeeeeEEEecccCcccccc----CCccccCCeEEEEeCCC
Confidence 46899999999999998765 3333 589999999 8999999999999998643 67789999999999985
Q ss_pred -------------ccHHh-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCC
Q 007834 274 -------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGD 329 (588)
Q Consensus 274 -------------~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~ 329 (588)
+++++ +.+.++.+.+.|+++|+++++|+|.++++|.+++ |++++ +
T Consensus 241 e~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~~------I~~~~-----~ 309 (522)
T cd03340 241 ELKAEKDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADRD------IFCAG-----R 309 (522)
T ss_pred CCCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHCC------cEEEE-----e
Confidence 34333 3456778899999999999999999999998875 36665 4
Q ss_pred ChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHH
Q 007834 330 GKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAY 406 (588)
Q Consensus 330 ~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~ 406 (588)
+++.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|++|..+
T Consensus 310 v~~~~l~rIa~~tGa~ii~-----~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~--------------------- 363 (522)
T cd03340 310 VPEEDLKRVAQATGGSIQT-----TVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKA--------------------- 363 (522)
T ss_pred CCHHHHHHHHHHHCCEEee-----ccccCCccccccceEEEEEEECCEEEEEEECCCCC---------------------
Confidence 4589999999999999999 78999999999999998 577899999998653
Q ss_pred HHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhH
Q 007834 407 LSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQ 485 (588)
Q Consensus 407 e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~ 485 (588)
..+||++||+|+.+++|.+|+++||++++|+++++| +||||||+||+++.+|++++++..+.+ +
T Consensus 364 --------------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~~~~~~~~~~-~ 428 (522)
T cd03340 364 --------------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQ-Q 428 (522)
T ss_pred --------------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHH-H
Confidence 479999999999999999999999999999999998 999999999999999999877666654 6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----C-CceeEEccCCcccccccCccccchHHHHHHHHHHHHHHH
Q 007834 486 IGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----D-WRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAA 560 (588)
Q Consensus 486 ~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~-~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~ 560 (588)
+++++|++||+.||++|++|||+|+.+++.+|++. + .++|||+.+|++.||++.|||||+.||+++++.|+|+|+
T Consensus 429 ~~~~~fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~i~~A~e~a~ 508 (522)
T cd03340 429 LVINAFAKALEIIPRQLCDNAGFDATDILNKLRQKHAQGGGKWYGVDINNEGIADNFEAFVWEPSLVKINALTAATEAAC 508 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCCeeeeeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999873 3 679999999999999999999999999999999999999
Q ss_pred HHHchhHHhhCC
Q 007834 561 VVLTTEAVLADK 572 (588)
Q Consensus 561 ~lL~iD~iI~~~ 572 (588)
+||+||++|+.+
T Consensus 509 ~iL~id~ii~~~ 520 (522)
T cd03340 509 LILSVDETIKNP 520 (522)
T ss_pred HHhhhhhheeCC
Confidence 999999999775
No 28
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=4.6e-90 Score=767.13 Aligned_cols=460 Identities=20% Similarity=0.315 Sum_probs=418.4
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C-----CCeEEecCHHHHHhhcccccchhhHHhHHHHHHH
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S-----DKLKVINDGVTIARAIELSDTIENAGAMLMQEVA 124 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~-----g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a 124 (588)
.+...|.+++..|+.||..++++++|||||+||+|||++ . |+++|||||+||+|+|+++||. |+|++++|
T Consensus 15 ~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP~----akll~~~a 90 (533)
T PTZ00212 15 AQEEKGETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNPA----AKILVDIS 90 (533)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCHH----HHHHHHHH
Confidence 457788999999999999999999999999999999999 5 9999999999999999999995 99999999
Q ss_pred HhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCC-----HHHHHHHHHHhcC
Q 007834 125 SKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAG 199 (588)
Q Consensus 125 ~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~ 199 (588)
++||+++||||||+|||+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++ .+.|.++|+|+++
T Consensus 91 ~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~ 170 (533)
T PTZ00212 91 KTQDEEVGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLS 170 (533)
T ss_pred HhhhhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999864 5789999998876
Q ss_pred C------chhHHHHHHHHHHHhccC---Cc--EEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEE
Q 007834 200 N------DEFIGNLIADAIIKIGAD---GV--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (588)
Q Consensus 200 ~------~~~l~~li~dA~~~v~~~---g~--I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 268 (588)
+ .+.|++++++|+..+.+. .. |...+|++++|+ ++++|+++++++.|+ |+++++||||++
T Consensus 171 sk~~~~~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds-~lv~G~v~~~~~~~~--------~~~~i~n~kIll 241 (533)
T PTZ00212 171 SKLLTVEKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDS-YLEDGFILEKKIGVG--------QPKRLENCKILV 241 (533)
T ss_pred ccccchhHHHHHHHHHHHHHHHhccCCccceEEEEecCcCcccc-EEEEeEEEecccCCC--------CCccccCCcEEE
Confidence 5 378999999999988542 22 344689999999 899999999987653 688999999999
Q ss_pred ecccc--------------ccHHhHH-----------HHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEee
Q 007834 269 TDQKI--------------STVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVK 323 (588)
Q Consensus 269 ~d~~i--------------~~~~~l~-----------~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk 323 (588)
+++++ ++++++. ++++.+.+.|+++++++++|++.++++|.+++ |+|||
T Consensus 242 ~~~~Le~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~~------I~avr 315 (533)
T PTZ00212 242 ANTPMDTDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEAG------IMAIE 315 (533)
T ss_pred EeCCCCCCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCC------CEEEe
Confidence 99986 4555442 24677889999999999999999999998865 58887
Q ss_pred CCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHh
Q 007834 324 CPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLA 400 (588)
Q Consensus 324 ~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~ 400 (588)
++. +.+|+|||++|||++++ +++++++++||+|+.|+ +++++|++|++|..
T Consensus 316 ~v~-----~~~l~rIa~~tGa~iis-----~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~---------------- 369 (533)
T PTZ00212 316 HAD-----FDGMERLAAALGAEIVS-----TFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAK---------------- 369 (533)
T ss_pred cCC-----HHHHHHHHHHhCCEEee-----cCCCCCHHHccCCceEEEEEECCeEEEEEEccCC----------------
Confidence 544 78999999999999999 78999999999999998 67889999998754
Q ss_pred hhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCC
Q 007834 401 ATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSM 479 (588)
Q Consensus 401 ~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 479 (588)
++.|||+|||+|+.+++|.||+++|||+++|+++++| +||||||+|++|+.+|++++++.
T Consensus 370 -------------------~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~~~ 430 (533)
T PTZ00212 370 -------------------GEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAKKV 430 (533)
T ss_pred -------------------CCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhhC
Confidence 3589999999999999999999999999999999998 99999999999999999998776
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHHHH
Q 007834 480 EDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNA 555 (588)
Q Consensus 480 ~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A 555 (588)
.+.+ ++++++|++||+.||++|++|||+|+.+++.+|++ .+.++|+|+.+|++.||++.|||||+.+|+++|+.|
T Consensus 431 ~~~~-~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A 509 (533)
T PTZ00212 431 EGKK-SLAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYKGNKTAGIDMEKGTVGDMKELGITESYKVKLSQLCSA 509 (533)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeccCCcccchhhccceecHHHHHHHHHHH
Confidence 6665 58999999999999999999999999999999984 366899999999999999999999999999999999
Q ss_pred HHHHHHHHchhHHhhCCCCCC
Q 007834 556 VSIAAVVLTTEAVLADKIKQP 576 (588)
Q Consensus 556 ~e~a~~lL~iD~iI~~~~p~~ 576 (588)
+++|++|||||++|..+ |+.
T Consensus 510 ~e~a~~iL~id~ii~~~-~~~ 529 (533)
T PTZ00212 510 TEAAEMILRVDDIIRCA-PRQ 529 (533)
T ss_pred HHHHHHHHhhhHhhhcC-Ccc
Confidence 99999999999999987 653
No 29
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=8.2e-90 Score=764.33 Aligned_cols=457 Identities=23% Similarity=0.322 Sum_probs=411.7
Q ss_pred hhcCH-HHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007834 53 ILFGK-ESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (588)
Q Consensus 53 ~~~g~-~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~ 130 (588)
..+|. +++..|+.||..|+++|+|||||+||+|||++ .|+++|||||+||+|+|+++||+ |+|++++|++||++
T Consensus 12 ~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~e~a~sqd~~ 87 (531)
T TIGR02346 12 HMSGLEEAVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQHPA----AKLLVMASEMQENE 87 (531)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccCHH----HHHHHHHHHHHhhh
Confidence 44564 59999999999999999999999999999999 99999999999999999999998 99999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCc-ccC---CHHHHHHHHHHhcCC-----c
Q 007834 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSF-PVT---GRDDIKAVASISAGN-----D 201 (588)
Q Consensus 131 ~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~-~v~---~~~~l~~va~ts~~~-----~ 201 (588)
+||||||+|||+++||+++.+++++|+||..|++||+.|++.+++.|+++++ +++ +.+.|.++|+|++++ +
T Consensus 88 ~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~tsl~sK~~~~~ 167 (531)
T TIGR02346 88 IGDGTNLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNKKELIKALKASISSKQYGNE 167 (531)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhccccCchH
Confidence 9999999999999999999999999999999999999999999999999986 764 477899999988753 7
Q ss_pred hhHHHHHHHHHHHhccCC--c-----EEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 202 EFIGNLIADAIIKIGADG--V-----ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~~g--~-----I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
+.|++++++|+.++++++ . |.+ ..|++++|+ ++++|++|++++.+ |++.++||||++++++
T Consensus 168 ~~ls~l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds-~li~Gi~~~~~~~~---------~~k~i~n~kI~l~~~~ 237 (531)
T TIGR02346 168 DFLAQLVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNS-EVLKGMVFNREAEG---------SVKRVKNAKVAVFSCP 237 (531)
T ss_pred HHHHHHHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhc-eeEeeeEEeccCCC---------CceeccCCCEEEEecC
Confidence 899999999999998654 2 332 489999998 99999999998432 5678999999999987
Q ss_pred c-------------ccHH-----------hHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCC
Q 007834 273 I-------------STVK-----------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (588)
Q Consensus 273 i-------------~~~~-----------~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~ 328 (588)
+ ++++ ++.++++++++.|++|||++++|+|.++++|..++ |+|||+|+
T Consensus 238 l~~~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~~------I~av~~~~-- 309 (531)
T TIGR02346 238 LDTATTETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKYN------IMVLKIPS-- 309 (531)
T ss_pred cCCCcccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHCC------cEEEecCC--
Confidence 4 2332 24567889999999999999999999999887543 69999888
Q ss_pred CChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhH
Q 007834 329 DGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 405 (588)
Q Consensus 329 ~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~ 405 (588)
..+|+|||++|||++++ +++++++++||+|+.|++ +++++.+++++..
T Consensus 310 ---~~~l~~Ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~--------------------- 360 (531)
T TIGR02346 310 ---KFELRRLCKTVGATPLA-----RLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENG--------------------- 360 (531)
T ss_pred ---HHHHHHHHHHHCCEEec-----ccccCCHhHccccceEEEEEECCEEEEEEEccCC---------------------
Confidence 56899999999999998 789999999999999986 4678888887642
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhh
Q 007834 406 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 484 (588)
Q Consensus 406 ~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq 484 (588)
.++++||+|||+|+.+++|++|+++||+|++|+++++| +||||||+||+|+.+|+++++...+.+
T Consensus 361 -------------~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~- 426 (531)
T TIGR02346 361 -------------DSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLD- 426 (531)
T ss_pred -------------CCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHH-
Confidence 14689999999999999999999999999999999999 999999999999999999887666654
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCc--ccccccCccccchHHHHHHHHHHHHH
Q 007834 485 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGR--YEDLLSAGVADPCRVARCALQNAVSI 558 (588)
Q Consensus 485 ~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~--i~d~~~~gI~Dp~~vk~~~l~~A~e~ 558 (588)
++++++|++||+.||++|++|||+|+.+++.+|++. +.++|||+.+|+ +.||++.|||||+.||+++|+.|+++
T Consensus 427 ~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~ 506 (531)
T TIGR02346 427 QYAIKKFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTSSGIDIEAESDGVKDASEAGIYDNLATKKWAIKLATEA 506 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeeeCCCccccChhhcCceEcHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999763 567999999999 59999999999999999999999999
Q ss_pred HHHHHchhHHhhCCCCC
Q 007834 559 AAVVLTTEAVLADKIKQ 575 (588)
Q Consensus 559 a~~lL~iD~iI~~~~p~ 575 (588)
|++|||||++|..+ |.
T Consensus 507 a~~iL~id~ii~~~-~~ 522 (531)
T TIGR02346 507 AVTVLRVDQIIMAK-PA 522 (531)
T ss_pred HHHHhhhhHhhccC-CC
Confidence 99999999999887 64
No 30
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=8.4e-89 Score=754.35 Aligned_cols=458 Identities=22% Similarity=0.338 Sum_probs=415.2
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C--CCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S--DKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~--g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
+...|.+++..|++|+..++++++|||||+||+|||++ . |+++|||||+|||++|+++||. |+|++++|++||
T Consensus 8 ~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP~----akll~~~a~~qd 83 (519)
T TIGR02341 8 QEERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNPA----AKVLVDMSKVQD 83 (519)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHhH
Confidence 46678899999999999999999999999999999999 5 9999999999999999999995 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCC-----HHHHHHHHHHhcCCc--
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAGND-- 201 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~~~-- 201 (588)
+++||||||+|||+++||+++.+++++|+||..|++||++|.+.++++|+++++|+++ .+.|.++|+|+++++
T Consensus 84 ~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~ski~ 163 (519)
T TIGR02341 84 DEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSKIL 163 (519)
T ss_pred hhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999853 478999999998753
Q ss_pred ----hhHHHHHHHHHHHhccC---CcEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 202 ----EFIGNLIADAIIKIGAD---GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 202 ----~~l~~li~dA~~~v~~~---g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
+.|++++++|+..+... ..|.+ ..|++++|+ ++++|+++++.+.|+ |+++++||+|+++|++
T Consensus 164 ~~~~~~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s-~l~~G~v~~~~~~~~--------~~~~~~n~~Ili~~~~ 234 (519)
T TIGR02341 164 SQHKDHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDS-YLDEGFLLEKKIGVN--------QPKRIENAKILIANTP 234 (519)
T ss_pred hhHHHHHHHHHHHHHHHhccCCChhheEEEEccCCCcccc-eEEeeEEEeccCCCC--------CceeeccccEEEEecC
Confidence 77899999999988432 23555 379999999 899999999986553 6778999999999998
Q ss_pred ccc--------------HHhHH-----------HHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCC
Q 007834 273 IST--------------VKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (588)
Q Consensus 273 i~~--------------~~~l~-----------~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~ 327 (588)
++. ++++. ++++.+.+.|++++++++.|++.++++|..++ |+||++++
T Consensus 235 Le~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~~------I~~v~~~~- 307 (519)
T TIGR02341 235 MDTDKVKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADAG------VMAIEHAD- 307 (519)
T ss_pred CCCCccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHCC------cEEEecCC-
Confidence 753 22231 24678899999999999999999999988764 68998887
Q ss_pred CCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhh
Q 007834 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDN 404 (588)
Q Consensus 328 ~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~ 404 (588)
+.+|+|||++|||++++ +++++++++||+|+.|+. ++++++++.+|+++
T Consensus 308 ----~~~l~~ia~~tGa~ii~-----~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~------------------- 359 (519)
T TIGR02341 308 ----FEGIERLALVTGGEIVS-----TFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKLG------------------- 359 (519)
T ss_pred ----HHHHHHHHHHhCCEEec-----ccccCCccccccCceEEEEEECCEEEEEEEcCCCC-------------------
Confidence 67999999999999999 789999999999999874 57899999988643
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChh
Q 007834 405 AYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPD 483 (588)
Q Consensus 405 ~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~e 483 (588)
+.|||+|||+|+.+++|.+|+++||++++|++++++ +||||||+|++|+++|++++++..+.+
T Consensus 360 ----------------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~ 423 (519)
T TIGR02341 360 ----------------EACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQKVPGKE 423 (519)
T ss_pred ----------------CEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhcCCChH
Confidence 589999999999999999999999999999999996 999999999999999999887666665
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHH
Q 007834 484 EQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 559 (588)
Q Consensus 484 q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 559 (588)
++++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|+.|+++|
T Consensus 424 -~~~i~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a 502 (519)
T TIGR02341 424 -ALAVEAFARALRQLPTIIADNAGFDSAELVAQLRAAHYNGNHTMGLDMEEGEIADMRKLGIIESYKVKRAVVSSAAEAA 502 (519)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceecCCCcccchhhccceEcHHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999999873 567999999999999999999999999999999999999
Q ss_pred HHHHchhHHhhCCCCC
Q 007834 560 AVVLTTEAVLADKIKQ 575 (588)
Q Consensus 560 ~~lL~iD~iI~~~~p~ 575 (588)
++||+||++|+.+ |+
T Consensus 503 ~~iL~id~ii~~~-~~ 517 (519)
T TIGR02341 503 EVILRVDNIIKAA-PR 517 (519)
T ss_pred HHHHhHHHHHhcC-CC
Confidence 9999999999998 84
No 31
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.8e-89 Score=754.02 Aligned_cols=439 Identities=23% Similarity=0.334 Sum_probs=405.2
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.+...|.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||. |+|++++|++||+
T Consensus 9 ~~~~~~~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~ 84 (480)
T cd03337 9 TKRESGRKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDE 84 (480)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHhHHH
Confidence 346788999999999999999999999999999999999 99999999999999999999995 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------c
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------D 201 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------~ 201 (588)
++||||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|++++++++ +.+.|.++|+|++++ +
T Consensus 85 ~~GDGTtt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~ 164 (480)
T cd03337 85 EVGDGTTSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWS 164 (480)
T ss_pred HhCCCcchhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHhccCcchhHH
Confidence 99999999999999999999999999999999999999999999999999999987 788899999999884 4
Q ss_pred hhHHHHHHHHHHHhccC--C---------cEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEE
Q 007834 202 EFIGNLIADAIIKIGAD--G---------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~~--g---------~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 268 (588)
+.|++++++|+..++++ + .|++ .+|+++.|+ ++++|++|++++.||. |+++++||+|++
T Consensus 165 ~~ls~lv~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds-~li~Gvvi~k~~~~~~-------m~~~~~n~kIll 236 (480)
T cd03337 165 DLMCNLALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDS-RVLDGVMLNKDVTHPK-------MRRRIENPRIVL 236 (480)
T ss_pred HHHHHHHHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhc-ccccceEEeccCCCCC-------CCcEecCCCEEE
Confidence 78999999999999754 2 2444 469999998 9999999999999974 889999999999
Q ss_pred eccccccHHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEee
Q 007834 269 TDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLS 348 (588)
Q Consensus 269 ~d~~i~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~ 348 (588)
+++++++ ||||+++|++.++++|.+|+ |+||++ +++++|+|||++|||++++
T Consensus 237 l~~~Le~-----------------lvi~~k~I~d~al~~L~~~~------I~~v~~-----v~~~~L~rIa~~tGa~ii~ 288 (480)
T cd03337 237 LDCPLEY-----------------LVITEKGVSDLAQHYLVKAG------ITALRR-----VRKTDNNRIARACGATIVN 288 (480)
T ss_pred EecCcce-----------------EEEeCCCccHHHHHHHHHCC------cEEEEe-----CCHHHHHHHHHHHCCEEec
Confidence 9999886 99999999999999999875 588875 5589999999999999999
Q ss_pred ccCCCcccCCCCcccee-EEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEE
Q 007834 349 GELGLTLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAV 424 (588)
Q Consensus 349 ~~~~~~l~~l~~~~lG~-~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~t 424 (588)
+++++++++||+ |+.++. ++++++++++|+++ +.||
T Consensus 289 -----~~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~-----------------------------------~~~T 328 (480)
T cd03337 289 -----RPEELTESDVGTGAGLFEVKKIGDEYFTFITECKDP-----------------------------------KACT 328 (480)
T ss_pred -----chhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCC-----------------------------------CEEE
Confidence 789999999999 555543 46788999988654 4899
Q ss_pred EEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHH
Q 007834 425 IKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIA 503 (588)
Q Consensus 425 I~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~ 503 (588)
|+|||+|+.+++|.||+++||+++++++++++ +||||||+||+|+++|++++++..+.+ ++++++|++||+.||++||
T Consensus 329 IllrG~t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~-~~~~~~~a~al~~ip~~La 407 (480)
T cd03337 329 ILLRGASKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVE-QWPYKAVASALEVIPRTLA 407 (480)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999996 999999999999999999887777765 5899999999999999999
Q ss_pred HhcCCChhHHHHhhhcC-----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhh
Q 007834 504 TNAGVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLA 570 (588)
Q Consensus 504 ~NaG~d~~~vl~~l~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~ 570 (588)
+|||+|+.+++.+|++. +.++|+|+.+|++.||++.|||||+.+|+++|++|+++|++|||||++|.
T Consensus 408 ~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 479 (480)
T cd03337 408 QNCGANVIRTLTELRAKHAQGENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480)
T ss_pred HHcCCCHHHHHHHHHHHHHccCCCeECeeccCCCcccchhccCeEcHHHHHHHHHHHHHHHHHHhhhhheec
Confidence 99999999999999873 45799999999999999999999999999999999999999999999874
No 32
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=2.4e-87 Score=735.88 Aligned_cols=438 Identities=36% Similarity=0.522 Sum_probs=406.9
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~ 130 (588)
...+|.+++..|++||..+++++++||||+||+|||++ .|+++|||||+||+++|+++||. |+|+++++++||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hp~----a~ll~~~~~~~~~~ 77 (464)
T cd00309 2 EREFGEEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVEHPA----AKLLVEVAKSQDDE 77 (464)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccCcCHH----HHHHHHHHHHHHhH
Confidence 45688999999999999999999999999999999999 99999999999999999999996 99999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcc--cCCHHHHHHHHHHhcC------Cch
Q 007834 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFP--VTGRDDIKAVASISAG------NDE 202 (588)
Q Consensus 131 ~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~--v~~~~~l~~va~ts~~------~~~ 202 (588)
+||||||+++|+++|++++.+++++|+||..|++||++|++.+++.|++++.+ +.+.+.|.++|+|+++ +++
T Consensus 78 ~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~ 157 (464)
T cd00309 78 VGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGGDD 157 (464)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHHHHHHHhHhcccccccccchH
Confidence 99999999999999999999999999999999999999999999999999998 5688999999999998 688
Q ss_pred hHHHHHHHHHHHhcc------CCcEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccc
Q 007834 203 FIGNLIADAIIKIGA------DGVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS 274 (588)
Q Consensus 203 ~l~~li~dA~~~v~~------~g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~ 274 (588)
.+++++++|+.++++ .+.|++ ..|++++|| ++++|++|+++|.||+ |+++++||+|++++++++
T Consensus 158 ~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds-~li~Gi~~~~~~~~~~-------m~~~~~n~~Ili~~~~Le 229 (464)
T cd00309 158 FLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDS-ELVVGMVFDKGYLSPY-------MPKRLENAKILLLDCKLE 229 (464)
T ss_pred HHHHHHHHHHHHhccccCccccceEEEEecCCCCcccc-eeeeeEEEecCCCCCC-------CceeecCceEEEEecCcc
Confidence 999999999999988 466666 479999999 8999999999999997 577899999999999998
Q ss_pred cHHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCc
Q 007834 275 TVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLT 354 (588)
Q Consensus 275 ~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~ 354 (588)
. |||++++|+++++++|.+++ |+||++ +++++|+|||++|||++++ +
T Consensus 230 ~-----------------lIi~~~~I~~~al~~L~~~~------I~~v~~-----~~~~~L~~Ia~~tGa~ii~-----~ 276 (464)
T cd00309 230 Y-----------------VVIAEKGIDDEALHYLAKLG------IMAVRR-----VRKEDLERIAKATGATIVS-----R 276 (464)
T ss_pred e-----------------EEecCCCcCHHHHHHHHHCC------eEEEEe-----CCHHHHHHHHHHhCCEEec-----c
Confidence 7 88888899999999998754 688875 4589999999999999999 7
Q ss_pred ccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCC
Q 007834 355 LAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHT 431 (588)
Q Consensus 355 l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t 431 (588)
+++++++++|+|+.|++ +++++++|.++.. ++.|||+|||+|
T Consensus 277 ~~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~-----------------------------------~~~~TIllrG~t 321 (464)
T cd00309 277 LEDLTPEDLGTAGLVEETKIGDEKYTFIEGCKG-----------------------------------GKVATILLRGAT 321 (464)
T ss_pred cccCCcccCccccEEEEEEEcCeeEEEEEecCC-----------------------------------CCEEEEEEeCCc
Confidence 88999999999999986 4567888887653 258999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCCh
Q 007834 432 EVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDG 510 (588)
Q Consensus 432 ~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~ 510 (588)
+.+++|+||+++||+++++++++++ +|||||++||+|+++|++++.+..+.+ ++++++|++||+.||++|++|||+|+
T Consensus 322 ~~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~-~~~~~~~a~aL~~ip~~L~~NaG~d~ 400 (464)
T cd00309 322 EVELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKE-QLGIEAFADALEVIPRTLAENAGLDP 400 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHH-HHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999996 999999999999999999887666654 68999999999999999999999999
Q ss_pred hHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhh
Q 007834 511 TIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLA 570 (588)
Q Consensus 511 ~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~ 570 (588)
.+++.+|++. ..++|+|+.+|++.||++.|||||+.+|+++++.|+|+|++||+||++|+
T Consensus 401 ~~~~~~l~~~~~~~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 464 (464)
T cd00309 401 IEVVTKLRAKHAEGGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKSATEAASLILTIDDIIV 464 (464)
T ss_pred HHHHHHHHHHhhccCCCeeEECCCCcEeehhhccCeecHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 9999999874 35789999999999999999999999999999999999999999999984
No 33
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.2e-87 Score=735.90 Aligned_cols=438 Identities=23% Similarity=0.317 Sum_probs=399.3
Q ss_pred cCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCC
Q 007834 55 FGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGD 133 (588)
Q Consensus 55 ~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~~GD 133 (588)
.+.+++..|+++|..|++++++||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||+++||
T Consensus 5 ~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~~~~~~GD 80 (472)
T cd03341 5 GLEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQHPA----AKLLVMASQMQEEEIGD 80 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCC
Confidence 35789999999999999999999999999999999 99999999999999999999998 99999999999999999
Q ss_pred CcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcc-cC---CHHHHHHHHHHhcC-----CchhH
Q 007834 134 GTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFP-VT---GRDDIKAVASISAG-----NDEFI 204 (588)
Q Consensus 134 GTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~-v~---~~~~l~~va~ts~~-----~~~~l 204 (588)
||||+|+|+++||+++.+++++|+||..|++||+.|++.+++.|++++.+ ++ +.+.+.++++|+++ ++++|
T Consensus 81 GTTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l 160 (472)
T cd03341 81 GTNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLRNKEEVSKALKTAIASKQYGNEDFL 160 (472)
T ss_pred ChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHhcccccchHHHH
Confidence 99999999999999999999999999999999999999999999999865 43 46778899998864 36799
Q ss_pred HHHHHHHHHHhccC--CcE-----E--EecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecccccc
Q 007834 205 GNLIADAIIKIGAD--GVI-----L--IESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIST 275 (588)
Q Consensus 205 ~~li~dA~~~v~~~--g~I-----~--v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~ 275 (588)
++++++|+.+++++ |.+ . ...|++++|| ++++|++|++... .++++++||+|++++++++.
T Consensus 161 ~~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds-~lv~Giv~~~~~~---------~~~~~~~n~~Ili~~~~Le~ 230 (472)
T cd03341 161 SPLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDS-KVVRGMVFKREPE---------GSVKRVKKAKVAVFSCPFDI 230 (472)
T ss_pred HHHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccc-eEEeeEEEccccC---------CCceeccCCcEEEEeccccC
Confidence 99999999999875 432 2 2489999999 9999999987532 24578999999999999887
Q ss_pred HHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcc
Q 007834 276 VKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTL 355 (588)
Q Consensus 276 ~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l 355 (588)
|++|||++++|+++++++|.++ +|+|||+|+ +.+|+|||++|||++++ ++
T Consensus 231 --------------g~~lvi~~~~I~d~al~~l~~~------~I~av~~~~-----~~~Le~Ia~~tGa~ii~-----~~ 280 (472)
T cd03341 231 --------------GVNVIVAGGSVGDLALHYCNKY------GIMVIKINS-----KFELRRLCRTVGATPLP-----RL 280 (472)
T ss_pred --------------CCeEEEECCCCCHHHHHHHHHC------CeEEEEeCC-----HHHHHHHHHHhCCEEec-----cc
Confidence 8999999999999999987654 479999888 78899999999999999 78
Q ss_pred cCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCH
Q 007834 356 AGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTE 432 (588)
Q Consensus 356 ~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~ 432 (588)
+++++++||+|+.|++. ++++++|+++++. ++.+||+|||+|+
T Consensus 281 ~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------------~~~~TI~lrG~t~ 326 (472)
T cd03341 281 GAPTPEEIGYCDSVYVEEIGDTKVVVFRQNKED----------------------------------SKIATIVLRGATQ 326 (472)
T ss_pred ccCCHhHCCCceEEEEEEECCeeEEEEEccCCC----------------------------------CCeEEEEEECCCH
Confidence 88999999999999874 4889999987531 3589999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChh
Q 007834 433 VELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGT 511 (588)
Q Consensus 433 ~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~ 511 (588)
.+++|.||+++||++++|+++++| +|||||++|++++.+|++++++..+.+ ++++++|++||+.||++|++|||+|+.
T Consensus 327 ~~l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~-~~~~~~~a~al~~ip~~L~~NaG~d~~ 405 (472)
T cd03341 327 NILDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLE-QYAIKKFAEAFEVVPRTLAENAGLDAT 405 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCHH
Confidence 999999999999999999999999 999999999999999999877666654 699999999999999999999999999
Q ss_pred HHHHhhhc---C-CCceeEEccCC--cccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhC
Q 007834 512 IVVEKTRT---S-DWRFGYNAMTG--RYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLAD 571 (588)
Q Consensus 512 ~vl~~l~~---~-~~~~Gid~~~g--~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~ 571 (588)
+++.+|+. . +.++|||+.+| ++.||++.|||||+.||+++|++|+|+|++|||||++|..
T Consensus 406 ~~~~~l~~~h~~~~~~~Gid~~~g~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 471 (472)
T cd03341 406 EVLSELYAAHQKGNKSAGVDIESGDEGTKDAKEAGIFDHLATKKWAIKLATEAAVTVLRVDQIIMA 471 (472)
T ss_pred HHHHHHHHHHHccCCeeeeeccCCCCCccChhhccceecHHHHHHHHHHHHHHHHHHhhhcceeec
Confidence 99999975 2 56799999999 9999999999999999999999999999999999999864
No 34
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-88 Score=680.19 Aligned_cols=462 Identities=21% Similarity=0.301 Sum_probs=426.1
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
..+-..|.-..-+|+.+|..+++.++|||||+||||+|++ .|+.+|+|||+||+|.|++-||. |+.|+++|++||
T Consensus 12 gtd~sqGk~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~g~~tIsNDGATIlKlldivhPa----aktlVdia~sQD 87 (543)
T KOG0361|consen 12 GTDPSQGKGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSKGKTTISNDGATILKLLDIVHPA----AKTLVDIARSQD 87 (543)
T ss_pred ccCcccCchhhhhchHHHHHHHHHHHhccCccccceeeecCCCcEEEecCcHHHHHHHhhcChh----HHHHHHHHhhcc
Confidence 4556678888889999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--C----HHHHHHHHHHhcCC--
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--G----RDDIKAVASISAGN-- 200 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~~~l~~va~ts~~~-- 200 (588)
.|+||||||||+||+++|+++..+++.|+||..|+++|++|...+++.|++++..++ + ++-|.+.|.|++++
T Consensus 88 aEVGDGTTSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKl 167 (543)
T KOG0361|consen 88 AEVGDGTTSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKL 167 (543)
T ss_pred ccccCCceeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999999999998886 2 46789999998765
Q ss_pred ----chhHHHHHHHHHHHhccCC---c--EEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecc
Q 007834 201 ----DEFIGNLIADAIIKIGADG---V--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (588)
Q Consensus 201 ----~~~l~~li~dA~~~v~~~g---~--I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~ 271 (588)
+++|+++++||+..+..+. . |++.+||+++|| .+++|+.|++.|++.+|. .+|+.|.||||+++|.
T Consensus 168 I~~ek~fF~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS-~lv~GVAFkKtFsYAGfE----qqPKk~~NpkIl~Lnv 242 (543)
T KOG0361|consen 168 IRQEKEFFAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDS-LLVNGVAFKKTFSYAGFE----QQPKKFLNPKILLLNV 242 (543)
T ss_pred hhhhHHHHHHHHHHHHHhhccccchhhcceeecCCCccchh-hhccceeeeehccccchh----hCccccCCceEEEEee
Confidence 6999999999999987531 2 677899999999 799999999999999874 5788999999999987
Q ss_pred cc-------------ccHHhHH-----------HHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCC
Q 007834 272 KI-------------STVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (588)
Q Consensus 272 ~i-------------~~~~~l~-----------~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~ 327 (588)
++ +++++++ +.|+++..+|.++|++.-.|.|.|-++|..+.+ .||
T Consensus 243 ELElKaEkdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdi-----FCA------ 311 (543)
T KOG0361|consen 243 ELELKAEKDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDI-----FCA------ 311 (543)
T ss_pred eeeecccccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCc-----eec------
Confidence 63 4556554 457789999999999999999999999998754 354
Q ss_pred CCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhhhh
Q 007834 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDN 404 (588)
Q Consensus 328 ~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~ 404 (588)
|+++.++|.|...+|||++.+ +..++.++.||.|..++ +++++|-+|+||+..
T Consensus 312 GRV~~eDl~Rv~~acGGsi~t-----t~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~a------------------- 367 (543)
T KOG0361|consen 312 GRVPEEDLNRVMQACGGSIQT-----TVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKA------------------- 367 (543)
T ss_pred CcCCHHHHHHHHHhcCcchhh-----hhhhcchhhcchhhhHHHHhhcchhhhhhcCCCcc-------------------
Confidence 789999999999999999999 78899999999999997 489999999999753
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChh
Q 007834 405 AYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPD 483 (588)
Q Consensus 405 ~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~e 483 (588)
..||+++||+.++.++|.+|++|||++++|.|+++. +|+|||+.||++|++|++++.++++.+
T Consensus 368 ----------------ktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~lRd~S~ti~gK~ 431 (543)
T KOG0361|consen 368 ----------------KTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQ 431 (543)
T ss_pred ----------------ceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHHHHHhhcccCcHH
Confidence 479999999999999999999999999999999998 999999999999999999999999875
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHH
Q 007834 484 EQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 559 (588)
Q Consensus 484 q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 559 (588)
|+.+.+|++|||.||++||+|+|+|..+++.+||.. +.|+|+|.+++.+.|+++.+||||..||++++..|+|+|
T Consensus 432 -q~~i~A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~G~~w~Gvdi~~e~i~dn~~~~VwEP~~VK~Nai~aateAa 510 (543)
T KOG0361|consen 432 -QLFINAYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQGEKWYGVDINTEGIADNFEKFVWEPSIVKINAITAATEAA 510 (543)
T ss_pred -HHHHHHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhcCCceeeeeecccchhhHHHhhccChHHHHHHHHHHHHHhh
Confidence 588999999999999999999999999999999884 789999999999999999999999999999999999999
Q ss_pred HHHHchhHHhhCC
Q 007834 560 AVVLTTEAVLADK 572 (588)
Q Consensus 560 ~~lL~iD~iI~~~ 572 (588)
++||.+|+.|+..
T Consensus 511 ~lIlsvDeTikn~ 523 (543)
T KOG0361|consen 511 CLILSVDETIKNP 523 (543)
T ss_pred hheEehhhhhcCC
Confidence 9999999999886
No 35
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-83 Score=645.39 Aligned_cols=464 Identities=21% Similarity=0.320 Sum_probs=417.0
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
-++.....+.|.+|++|+++++++++|||||+||||||.. .|+++|||||+||||.|++-||. |+||++++..||
T Consensus 18 f~d~ekp~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~gev~iTNDGaTILk~m~vlhP~----akmLvelS~aQD 93 (534)
T KOG0358|consen 18 FKDKEKPEQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGKGEVIITNDGATILKQMNVLHPA----AKMLVELSAAQD 93 (534)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCCCcEEEecChHHHHHHHhhhChH----HHHHHHhhhhcc
Confidence 4556667899999999999999999999999999999999 99999999999999999999997 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------ 200 (588)
.++||||||||||||+||+.+.+|+++|+||+.|...|+.|.+..+++|++++.|++ +++.|.+-|+||+|+
T Consensus 94 ~eaGDGTTsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~Li~~atTsLnSKvvSq~ 173 (534)
T KOG0358|consen 94 SEAGDGTTSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRESLIKSATTSLNSKVVSQY 173 (534)
T ss_pred ccccCCceEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999998887 788899999999875
Q ss_pred chhHHHHHHHHHHHhccCC--------cEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 201 DEFIGNLIADAIIKIGADG--------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~g--------~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
...++.+.+||+.++-..+ .|++ +.||.++|+ ++++|++|++..... ..|.+++++||-++.
T Consensus 174 s~llapmAVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDt-e~i~glvl~~~~~~~-------~gptriekAkIglIQ 245 (534)
T KOG0358|consen 174 SSLLAPMAVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDT-ELIKGLVLTQKASKS-------AGPTRIEKAKIGLIQ 245 (534)
T ss_pred ccccchHHHHHHHhccCcccccccchhhhhhHHhhCCccchh-hhhcceEEeeecccC-------CCcchhhhceeeEEE
Confidence 4788999999999985421 2443 689999999 999999999875442 156788999999887
Q ss_pred cccccHH------------------------hHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCC
Q 007834 271 QKISTVK------------------------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (588)
Q Consensus 271 ~~i~~~~------------------------~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~ 326 (588)
+.|+-++ .++++++++++.|+|++++|++|=.++++-|..|.+.. ++|++||
T Consensus 246 F~iS~PKtdmen~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL~k-lkimvik--- 321 (534)
T KOG0358|consen 246 FQISPPKTDMENQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVIK--- 321 (534)
T ss_pred EEecCCCCCcccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHHHh-CcEEEEc---
Confidence 7543221 24578889999999999999999888888777776643 6799987
Q ss_pred CCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE----ecceEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007834 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV----KSNSTTIVADPYTKAEIQARIMQIKKDLAAT 402 (588)
Q Consensus 327 ~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~----~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~ 402 (588)
|+.++++|.+|+.+|++++. +++.++++.||++..+++ ++.+++-+.|+.+.
T Consensus 322 --dieRediefick~l~c~Pia-----~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~----------------- 377 (534)
T KOG0358|consen 322 --DIEREDIEFICKTLGCKPIA-----DIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNA----------------- 377 (534)
T ss_pred --cccHhhHHHHHhhcCCeecc-----hhhhcChhhcCcchhhhhcccCCCccEEEEEEeecC-----------------
Confidence 56699999999999999999 799999999999999986 34477777776543
Q ss_pred hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCC
Q 007834 403 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMED 481 (588)
Q Consensus 403 ~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~ 481 (588)
|..++|++||+++..++|.+|++|||||++|+.++.. ++||||+.||+++..|.+++.+..+
T Consensus 378 -----------------g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t~eG 440 (534)
T KOG0358|consen 378 -----------------GRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALARTLEG 440 (534)
T ss_pred -----------------CCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhhhcc
Confidence 5689999999999999999999999999999999997 9999999999999999999998888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHH
Q 007834 482 PDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVS 557 (588)
Q Consensus 482 ~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e 557 (588)
.+ .|.+++|++|||.||.+||+|||++|+.++++||+. +++.|++.+.|.+.||++..|+.|+.|-.++++.|+|
T Consensus 441 ~~-~yc~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~~tni~ee~VvQPllVs~SaitlA~E 519 (534)
T KOG0358|consen 441 VE-AYCWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGGITNILEENVVQPLLVSISAITLATE 519 (534)
T ss_pred ch-hHHHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeecccchhhHHHhcccceeeeHHHHHHHHH
Confidence 76 489999999999999999999999999999999984 6899999999999999999999999999999999999
Q ss_pred HHHHHHchhHHhhC
Q 007834 558 IAAVVLTTEAVLAD 571 (588)
Q Consensus 558 ~a~~lL~iD~iI~~ 571 (588)
++.+||+||+|+..
T Consensus 520 tvr~ILKIDDIv~a 533 (534)
T KOG0358|consen 520 TVRSILKIDDIVNA 533 (534)
T ss_pred HHHHHhhhhhhccc
Confidence 99999999999854
No 36
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=1.3e-80 Score=685.91 Aligned_cols=440 Identities=31% Similarity=0.496 Sum_probs=402.6
Q ss_pred HHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCcchhHHHHHHHHHH
Q 007834 70 LADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKS 148 (588)
Q Consensus 70 la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~~GDGTTsvvvLa~~Ll~~ 148 (588)
|+++|++||||+|++|||++ .|+++|||||+||+++|+++||+ |+|+++++++|++++||||||+|+|+++|+++
T Consensus 1 l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~P~----~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~ 76 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINHPI----AKLLVEASKSQDEEVGDGTTSVVLLACELLRN 76 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSSHH----HHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhccch----hhhHHHhHHHHHhhhccccceeeecccchhhh
Confidence 68999999999999999999 99999999999999999999998 99999999999999999999999999999999
Q ss_pred HHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCH-HHHHHHHHHhcCCc------hhHHHHHHHHHHHhccC---
Q 007834 149 GMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGR-DDIKAVASISAGND------EFIGNLIADAIIKIGAD--- 218 (588)
Q Consensus 149 ~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~~l~~va~ts~~~~------~~l~~li~dA~~~v~~~--- 218 (588)
+.+++++|+||..|++||+.|.+.+++.|++++.++++. +.+.++|+|+++++ +.|++++++|+..+..+
T Consensus 77 ~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~~~ 156 (485)
T PF00118_consen 77 ALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNFDL 156 (485)
T ss_dssp HHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTHHG
T ss_pred hhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcccccc
Confidence 999999999999999999999999999999999999876 89999999999987 89999999999444321
Q ss_pred CcE--EEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHh------------------
Q 007834 219 GVI--LIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKE------------------ 278 (588)
Q Consensus 219 g~I--~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~------------------ 278 (588)
+.+ ....|++.+|| ++++|++|+++|.++ +|+++++||+|++++++++..+.
T Consensus 157 ~~i~i~~i~g~~~~dS-~li~Giv~~~~~~~~-------~~~~~~~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 228 (485)
T PF00118_consen 157 DNIKIIKIPGGSISDS-ELINGIVLDKGFSSP-------NMPKKIENPKILLLNCPLEYSKSFKSEIRITSPEQLDELSK 228 (485)
T ss_dssp GGEEEEEEESSSSGGE-EEESEEEESSSBSST-------TSBSEEESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHHH
T ss_pred cchhhhhhcccccccc-ccccceeeecccccc-------ccccccccceEEeeecccccccccccccchhhHHHHHHHHh
Confidence 223 33578888998 899999999999997 37888999999999999876665
Q ss_pred -----HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCC
Q 007834 279 -----IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGL 353 (588)
Q Consensus 279 -----l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~ 353 (588)
+.++++++.+.|++|||++++|++.++++|..|++ .++ .++++.+|++|+.+|||++++
T Consensus 229 ~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I------~~i-----~~v~~~~l~~i~~~tg~~ii~----- 292 (485)
T PF00118_consen 229 QEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGI------LVI-----RRVSKEDLERIARATGASIIS----- 292 (485)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTH------EEE-----SSEHHHHHHHHHHHHTSBEBS-----
T ss_pred hhhhhhccccceEeeeccceeeeecccccccchhhhhhhh------hcc-----ccchHHHHHhhhcccCCcEec-----
Confidence 77899999999999999999999999999998875 444 466799999999999999999
Q ss_pred cccCCCCccceeEEEE---EEecceEEEEeC--CCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEec
Q 007834 354 TLAGATSDQLGIARKV---TVKSNSTTIVAD--PYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVG 428 (588)
Q Consensus 354 ~l~~l~~~~lG~~~~v---~~~~~~~~~i~g--~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~ 428 (588)
++++++++++|+|+.+ ++++++++++++ +. .+..+||+||
T Consensus 293 ~~~~l~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~~~Till~ 337 (485)
T PF00118_consen 293 SLDDLSDEDLGFCKSVEEREIGNKKYIFIEGIGCL-----------------------------------SSKICTILLR 337 (485)
T ss_dssp SCGGSTGGGSEEEEEEEEEEETSSEEEEEEEHSES-----------------------------------SSSEEEEEEE
T ss_pred ccccccchhhhhhhhhhhccccccccccccccccc-----------------------------------ccCceEEEec
Confidence 7888998899999999 567899999984 32 2468999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcC
Q 007834 429 AHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAG 507 (588)
Q Consensus 429 G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG 507 (588)
|+|+.+++|++++++||+++++++++++ +|||||++|++|+++|++++.+.++. +++++++|++||+.||++|++|||
T Consensus 338 g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~-~~~~~~~~a~aL~~ip~~L~~NaG 416 (485)
T PF00118_consen 338 GPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGK-EQLAIEAFADALESIPKTLAQNAG 416 (485)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSH-HHHHHHHHHHHTTHHHHHHHHHTT
T ss_pred cccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCc-hhhhHHHHHHHHHHhhhhhhhccC
Confidence 9999999999999999999999999987 99999999999999999888776665 468999999999999999999999
Q ss_pred CChhHHHHhhhc---CCCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCC
Q 007834 508 VDGTIVVEKTRT---SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIK 574 (588)
Q Consensus 508 ~d~~~vl~~l~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p 574 (588)
+|+.+++++|+. .++++|||+.+|++.||.+.|||||+.+|+++|+.|+|+|++||+||++|..+ |
T Consensus 417 ~~~~~~~~~l~~~h~~~~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l~~A~~~a~~iL~id~iI~~~-~ 485 (485)
T PF00118_consen 417 LDSSEVISKLKSFHNNGNNYGIDLDTGEIVDMKEAGILDPLLVKISALKSAVEIASLILRIDEIIMAK-P 485 (485)
T ss_dssp STHHHHHHHHHHHHHSTTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEES-S
T ss_pred CCceeeehhhHhhhccccccCcCccCCceeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 999999999988 57899999999999999999999999999999999999999999999999987 5
No 37
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.8e-79 Score=610.23 Aligned_cols=461 Identities=21% Similarity=0.336 Sum_probs=413.6
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec---CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 53 ILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE---SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 53 ~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~---~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
-..|+.||.+.+.|+..+.|+|||||||+||+||+.+ .|.+.+||||+||||++.+++|. ||+|+++|+-||+
T Consensus 13 eErge~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnpa----AkvLv~~S~vQD~ 88 (527)
T KOG0363|consen 13 EERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNPA----AKVLVDISKVQDD 88 (527)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCch----hhheecccccccc
Confidence 3467899999999999999999999999999999998 57899999999999999999995 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCC-----HHHHHHHHHHhcCC----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAGN---- 200 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~~---- 200 (588)
|+|||||||+||+++||+|+.+|+...+||+.|+.||++|...+.+.|.+.++.-.+ +++|.++|+|.+++
T Consensus 89 EvGDGTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiLs 168 (527)
T KOG0363|consen 89 EVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKILS 168 (527)
T ss_pred ccCCCceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988765442 57899999998764
Q ss_pred --chhHHHHHHHHHHHhccCCc-----EEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecccc
Q 007834 201 --DEFIGNLIADAIIKIGADGV-----ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKI 273 (588)
Q Consensus 201 --~~~l~~li~dA~~~v~~~g~-----I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i 273 (588)
+++|++|+++|+.++...+. |.++.||+++|| .+-+|+.+++.+-. .+|++++||+||+-+.++
T Consensus 169 q~kehFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dS-fLDeGFlL~K~igv--------~qpkriena~iLIANT~m 239 (527)
T KOG0363|consen 169 QDKEHFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDS-FLDEGFLLDKKIGV--------NQPKRIENAKILIANTPM 239 (527)
T ss_pred hhHHHHHHHHHHHHHHhcCCCCccceeeehhcCCccccc-cccccceeccccCC--------CCcccccccceEEecCCC
Confidence 69999999999999865432 444799999999 79999999987533 267899999999988763
Q ss_pred c--------------cHH-----------hHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCC
Q 007834 274 S--------------TVK-----------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (588)
Q Consensus 274 ~--------------~~~-----------~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~ 328 (588)
+ +.. .+...++++.++|+|+.|-.+=|.+.-.++|.... |+++..-.|
T Consensus 240 DtDKvKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~dag------i~aIEHADF- 312 (527)
T KOG0363|consen 240 DTDKVKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADAG------IMAIEHADF- 312 (527)
T ss_pred cccceeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhcC------cceeecccc-
Confidence 2 211 34567899999999999999989888888776543 467654443
Q ss_pred CChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhH
Q 007834 329 DGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 405 (588)
Q Consensus 329 ~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~ 405 (588)
+-+||++..|||.+++ +|++++..+||.|+.++ +++++++-|+|+..
T Consensus 313 ----dGiERLalvtGGeI~S-----TFd~p~~~klG~C~~IeeimiGed~li~FSGv~~--------------------- 362 (527)
T KOG0363|consen 313 ----DGIERLALVTGGEIVS-----TFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKL--------------------- 362 (527)
T ss_pred ----hhHHHHhhcccceeee-----ccCCcchhccccchhhHHHhcCccceeeeccccc---------------------
Confidence 4589999999999999 89999999999999987 58999999999853
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhh
Q 007834 406 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 484 (588)
Q Consensus 406 ~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq 484 (588)
|-.|||++||.|+++++|.+|++|||||++...+++. +++||||.||.+++++.+++...++.+
T Consensus 363 --------------GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~~~pGke- 427 (527)
T KOG0363|consen 363 --------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQETPGKE- 427 (527)
T ss_pred --------------ccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHhhCCchh-
Confidence 3479999999999999999999999999999999998 999999999999999999998888876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHH
Q 007834 485 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAA 560 (588)
Q Consensus 485 ~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~ 560 (588)
..++++|++||..+|.+||.|+|+|+.+++++|++. ...+|+|+.+|++.||.+.||+|.+.+|.+.+.+|.|++.
T Consensus 428 a~AieAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~~vv~sasEaae 507 (527)
T KOG0363|consen 428 ALAIEAFARALRQLPTIIADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEIGDMRELGIVESLKVKQAVVSSASEAAE 507 (527)
T ss_pred hHHHHHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhcCCcccccccccCchhhHHHhhhHHHHHHHHHHHhhhHHHHH
Confidence 589999999999999999999999999999999985 6789999999999999999999999999999999999999
Q ss_pred HHHchhHHhhCCCCCCCCC
Q 007834 561 VVLTTEAVLADKIKQPKPA 579 (588)
Q Consensus 561 ~lL~iD~iI~~~~p~~~~~ 579 (588)
+|||+|.||... |+.+.+
T Consensus 508 ~ilrvD~Iik~a-PR~r~~ 525 (527)
T KOG0363|consen 508 MILRVDNIIKAA-PRERER 525 (527)
T ss_pred HHHhhhhhhhcC-Cccccc
Confidence 999999999998 886543
No 38
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.8e-77 Score=591.60 Aligned_cols=381 Identities=20% Similarity=0.294 Sum_probs=364.2
Q ss_pred eecccccchhHHhhcccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccch
Q 007834 34 LWRNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTI 112 (588)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~ 112 (588)
+||+++|||++++++..+.+.+|.++.++++-+.+++|+++++|+||+|++||.++ .|++++|||| .|++
T Consensus 4 ~~~~~~~~~iiLrDQd~~~Ri~G~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pdgditvtndg---------d~~I 74 (400)
T KOG0357|consen 4 AFDEFGRPFIILRDQERKDRLFGLDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPDGDITVTNDG---------VHQI 74 (400)
T ss_pred HhHhhcCceEEeeeccCCchhhHHHHhhhhhHHHHHHHHHHHhhcCccccccccccCCCCceeeecc---------chHH
Confidence 78999999999999999999999999999999999999999999999999999999 9999999999 6787
Q ss_pred hhHHhHHHHHHHHhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHH
Q 007834 113 ENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKA 192 (588)
Q Consensus 113 ~~~~akLl~~~a~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~ 192 (588)
++|+..+++.||.++|||||.+++|++.+++++.+++.+|+||..|..||+.+...++++|++.+.+++
T Consensus 75 ----akLmv~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e------- 143 (400)
T KOG0357|consen 75 ----AKLIVILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE------- 143 (400)
T ss_pred ----HHHHHHhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc-------
Confidence 999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred HHHHhcCCchhHHHHHHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 193 VASISAGNDEFIGNLIADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 193 va~ts~~~~~~l~~li~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
T Consensus 144 -------------------------------------------------------------------------------- 143 (400)
T KOG0357|consen 144 -------------------------------------------------------------------------------- 143 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCC
Q 007834 273 ISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELG 352 (588)
Q Consensus 273 i~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~ 352 (588)
+..+++.++++|.+|+||||+|||||+++|.+|++ .||||+| ..++|.||++|||++++
T Consensus 144 ------f~emi~~vK~~ga~l~icqwgfddeanhll~~n~l------pavrwVG-----GpEiEliAiaT~grIVp---- 202 (400)
T KOG0357|consen 144 ------FEEMIQQIKETGANLAICQWGFDDEANHLLLQNNL------PAVRWVG-----GPEIELIAIATGGRIVP---- 202 (400)
T ss_pred ------HHHHHHHHHhhCCcEEEEecccCchhhhHHhhcCC------CceeecC-----CcceEEEEeecCCeeec----
Confidence 45678889999999999999999999999999986 8999999 67899999999999999
Q ss_pred CcccCCCCccceeEEEEEE-----ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEe
Q 007834 353 LTLAGATSDQLGIARKVTV-----KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKV 427 (588)
Q Consensus 353 ~~l~~l~~~~lG~~~~v~~-----~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v 427 (588)
+|+++++++||+++.|+. ++|++.+++.|++. +.+||+|
T Consensus 203 -rF~eL~~~kLG~aglVrE~sfgttkdkmlviEqc~ns-----------------------------------kaVTifv 246 (400)
T KOG0357|consen 203 -RFSELTAEKLGFAGLVREISFGTTKDKMLVIEQCKNS-----------------------------------KAVTIFV 246 (400)
T ss_pred -cHhhhCHhhccccceEEEEecccccceEEEEEecCCC-----------------------------------ceEEEEE
Confidence 899999999999999985 58999999999875 4799999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhc
Q 007834 428 GAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNA 506 (588)
Q Consensus 428 ~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~Na 506 (588)
||+|+++++|.||++|||||++|+.++|. +|+|||++|+.||.++.+.++++++.|| |++++|++||++||..||+||
T Consensus 247 Rg~Nkmii~EakrslhdalCvirnlird~rivYgGGaaEiscslav~~ead~~~g~eq-ya~rafa~ale~ipmalaens 325 (400)
T KOG0357|consen 247 RGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKIPGIEQ-YAFRAFADALESIPMALAENS 325 (400)
T ss_pred ecCcceeHHHHHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhHhhccCCcHHH-HHHHHHHHHHhhcchhhhhcc
Confidence 99999999999999999999999999998 9999999999999999999999999885 899999999999999999999
Q ss_pred CCChhHHHHhhhcC-----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCC
Q 007834 507 GVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADK 572 (588)
Q Consensus 507 G~d~~~vl~~l~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~ 572 (588)
|++|++.++++++. ++++|+||......||.+++|+||+..|++++..|++++.|||+||+|+...
T Consensus 326 gl~pi~~ls~~ka~q~~~~~~~lGidcl~~G~nDMk~~~vie~l~~KkqQi~laTQ~vrMiLKiddv~~~~ 396 (400)
T KOG0357|consen 326 GLDPIETLSDVKARQVKEMNPALGIDCLHKGTNDMKEQHVIETLIGKKQQISLATQMVRMILKIDDVRKPG 396 (400)
T ss_pred CCCchhhhhHhHHHHHHhcCcccCcchhccCchhhhhhccHHHhhhhHHHHHHHHHHHHHhhhccceecCC
Confidence 99999999999873 7899999999999999999999999999999999999999999999998664
No 39
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-71 Score=575.25 Aligned_cols=453 Identities=24% Similarity=0.322 Sum_probs=401.7
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCc
Q 007834 57 KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGT 135 (588)
Q Consensus 57 ~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~~GDGT 135 (588)
+++...+++||+++++++||+|||+||+|||+| .|++.+|||.+||+++++++||. ||||+++++.|++++||||
T Consensus 25 e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~~k~~~TndaatIlrelev~HPa----akllv~a~~~q~~~iGDgt 100 (537)
T KOG0362|consen 25 EEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHLGKTFVTNDAATILRELEVEHPA----AKLLVEATQMQEEEIGDGT 100 (537)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCcceeeecccceEEEcCChHHHHHHhhccCcH----HHHHHHHHHHHHHhhCCCc
Confidence 678889999999999999999999999999999 99999999999999999999995 9999999999999999999
Q ss_pred chhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCc----ccCCHHHHHHHHHHh--cCCchhHHHHHH
Q 007834 136 TTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSF----PVTGRDDIKAVASIS--AGNDEFIGNLIA 209 (588)
Q Consensus 136 TsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~----~v~~~~~l~~va~ts--~~~~~~l~~li~ 209 (588)
+++|+|+++||++|.++|..|++|.+|++||+.|.+.+++.|.++.. +++|.+.....+..| +.++++++++++
T Consensus 101 nfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~~~~~rs~i~skq~~~ed~l~~lVa 180 (537)
T KOG0362|consen 101 NFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDKEWALRSVIMSKQYGNEDFLTKLVA 180 (537)
T ss_pred eEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccChHHHHHHHHHHhhcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998742 334555333222223 334799999999
Q ss_pred HHHHHhccCC-----cEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc----------
Q 007834 210 DAIIKIGADG-----VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK---------- 272 (588)
Q Consensus 210 dA~~~v~~~g-----~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~---------- 272 (588)
+|+..+.+.+ .|.+ ..|+++++| .++.||+|++. +++...+-++++|.++.||
T Consensus 181 ~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S-~Vv~GmVfkr~---------~eG~v~~ak~arvAvf~cP~d~~~TEtkg 250 (537)
T KOG0362|consen 181 KACVSILPLMSFNVDNIRVCKILGGGLEDS-CVVCGMVFKRD---------PEGEVKSAKDARVAVFACPFDIAQTETKG 250 (537)
T ss_pred HHHHhhcccccccccceEEEEEecCCcccc-eeeEEEEeccc---------cCCcccccccceeEEEecCCCcccccCcc
Confidence 9999998863 2333 589999999 89999999987 2344467788999999998
Q ss_pred ---cccHHhHHH-----------HHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHH
Q 007834 273 ---ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDI 338 (588)
Q Consensus 273 ---i~~~~~l~~-----------~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~i 338 (588)
|++++++.+ .++.+...|+++|++...+++.+|+++ |+ ++|++++.++ +.+|.++
T Consensus 251 TvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl--nk----y~ImVlqi~S-----k~eLrrl 319 (537)
T KOG0362|consen 251 TVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL--NK----YKIMVLQINS-----KFDLRRL 319 (537)
T ss_pred eeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh--cc----ccEEEEEecc-----HhhHHHH
Confidence 567776643 466788899999999999999999876 44 5689999888 8999999
Q ss_pred HHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 007834 339 ALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERI 415 (588)
Q Consensus 339 a~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~ 415 (588)
|+..||++.+ ++..+.+..+|+|.+|. +++..+++|.....
T Consensus 320 crtvGA~~l~-----rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~------------------------------- 363 (537)
T KOG0362|consen 320 CRTVGATALP-----RLFPPAPEELGYCDSVSTQEIGDTLVVVFRWEST------------------------------- 363 (537)
T ss_pred HHHcCCccch-----hccCCCCccccccceeeeeecCCceEEEEeeccC-------------------------------
Confidence 9999999999 89999999999999996 46778887775321
Q ss_pred HHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHH
Q 007834 416 AKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKA 494 (588)
Q Consensus 416 ~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~A 494 (588)
.+.+.|+++||+|+..+|+.||.++|++++.+...+++ ++||+|++|+++++.|.++..+.++.+| ++++.|++|
T Consensus 364 ---~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~~~Gl~q-~Aik~fa~A 439 (537)
T KOG0362|consen 364 ---GTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGATLPGLKQ-LAIKKFAEA 439 (537)
T ss_pred ---CCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcccCCCcch-hHHHHHHHH
Confidence 13589999999999999999999999999999999998 9999999999999999999999999985 899999999
Q ss_pred HHHHHHHHHHhcCCChhHHHHhhhcC---CCceeEEccCC-cccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhh
Q 007834 495 LIVPAISIATNAGVDGTIVVEKTRTS---DWRFGYNAMTG-RYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLA 570 (588)
Q Consensus 495 L~~ip~~L~~NaG~d~~~vl~~l~~~---~~~~Gid~~~g-~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~ 570 (588)
|+.+|++|++|+|+++.+++++|... ...+|+|+..+ ...|+.+.||||-+..|.++++.|+++|.++|++|+||+
T Consensus 440 le~~PktlaEnagl~~~evia~ly~~h~~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~a~k~at~aa~tvl~vDqiim 519 (537)
T KOG0362|consen 440 LEVLPKTLAENAGLAVTEVIAKLYAVHQGGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQAIKLATEAALTVLTVDQIIM 519 (537)
T ss_pred hccccHhHHHhcCCcHHHHHHHHHHhhcCCCcceeeeeccccccChhhhchHHHHHHHHHHHHHHHhhhheeeehhheeE
Confidence 99999999999999999999999874 45689998877 589999999999999999999999999999999999999
Q ss_pred CCCCC
Q 007834 571 DKIKQ 575 (588)
Q Consensus 571 ~~~p~ 575 (588)
.+ |.
T Consensus 520 ak-~a 523 (537)
T KOG0362|consen 520 AK-KA 523 (537)
T ss_pred ec-cc
Confidence 98 65
No 40
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-72 Score=579.31 Aligned_cols=466 Identities=24% Similarity=0.306 Sum_probs=413.2
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~ 130 (588)
+...|..+|.+|..|+..+++++++||||-|++||+++ .|++++||||+|||+.+.++||. +|+|+++++.||++
T Consensus 13 e~~sg~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~HPa----~KiLvelaq~qd~e 88 (545)
T KOG0360|consen 13 ERLSGERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILSLLEVEHPA----AKVLVELAQLQDEE 88 (545)
T ss_pred CcccchhhhhhhhHHHHHHHHHHHhccCccchhhhccccccceEEeccHHHHHHhhhhcchH----HHHHHHHHHhcccc
Confidence 45678999999999999999999999999999999999 99999999999999999999996 99999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHh-cCcccC--CHHHHHHHHHHhcCC------c
Q 007834 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVT--GRDDIKAVASISAGN------D 201 (588)
Q Consensus 131 ~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~~~l~~va~ts~~~------~ 201 (588)
+|||||+||+++++|++++.+|+..++||+.|+.||+.|+..+++++++ ++.|++ .++.|.++++|++++ .
T Consensus 89 vgDgttsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~~Lin~~ktsmsSK~i~~ds 168 (545)
T KOG0360|consen 89 VGDGTTSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQILINLAKTSMSSKIIGMDS 168 (545)
T ss_pred ccCCceEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchHHHHHHHHhhhcceecccch
Confidence 9999999999999999999999999999999999999999999999875 577877 578899999999865 4
Q ss_pred hhHHHHHHHHHHHhcc---CCc---------EEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEe
Q 007834 202 EFIGNLIADAIIKIGA---DGV---------ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~---~g~---------I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~ 269 (588)
++|+++++||+..+.- +|. |-+-.|.+.-|| .+++|+.+.....+.. |+..++|+||+++
T Consensus 169 ~~f~~~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS-~l~~GyaLnc~~asq~-------m~~~i~~~Kiacl 240 (545)
T KOG0360|consen 169 DFFTEMVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIES-MLLPGYALNCSVASQM-------MPLRIKNAKIACL 240 (545)
T ss_pred HHHHHHHHHHHHHHhhcccCCceeccccceeEEecCCccchhh-eeecceeeeccHhhhc-------cccccccceeeeE
Confidence 8999999999988632 232 222489999999 7999999998766643 8889999999999
Q ss_pred cccc-------------ccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCC
Q 007834 270 DQKI-------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (588)
Q Consensus 270 d~~i-------------~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~ 325 (588)
|+.+ .+++++ .+.++++.+.|+|+|+++++|||..+.+|+++. ++||
T Consensus 241 d~~Lqk~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~veag------amAV--- 311 (545)
T KOG0360|consen 241 DFTLQKTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEAG------AMAV--- 311 (545)
T ss_pred ecccccccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHcc------hhhh---
Confidence 9863 344433 235678999999999999999999999999875 3666
Q ss_pred CCCCChhHHHHHHHHHhCCeEeeccCCCc-ccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhh
Q 007834 326 GFGDGKKALLQDIALMTGADFLSGELGLT-LAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAA 401 (588)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG~~ii~~~~~~~-l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~ 401 (588)
++.++++|++|+++||++++++..++. -+.+.++.+|+|++|. +++|.++++.+...
T Consensus 312 --rR~~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka----------------- 372 (545)
T KOG0360|consen 312 --RRCKKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKA----------------- 372 (545)
T ss_pred --HHHHHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCcc-----------------
Confidence 467799999999999999999543332 1356788999999985 57888888887532
Q ss_pred hhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCC
Q 007834 402 TDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSME 480 (588)
Q Consensus 402 ~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~ 480 (588)
..|+|++||+|+..++|++|++|||||++|..++++ +||||||+|..++-+|++|+.+..
T Consensus 373 -------------------~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~aLs~yle~~a~s~~ 433 (545)
T KOG0360|consen 373 -------------------TSASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETALSIYLENFATSVG 433 (545)
T ss_pred -------------------ceeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHHHHHHHHhhcccCc
Confidence 269999999999999999999999999999999999 999999999999999999998887
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC------------CCceeEEccCCcccccccCccccchHHH
Q 007834 481 DPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGRYEDLLSAGVADPCRVA 548 (588)
Q Consensus 481 ~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~------------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk 548 (588)
++|| .++.-|+.||..||++|+-|++.|+.+.+++++.. ..++|.|+.+|++.|.++.|+++|..+|
T Consensus 434 srE~-laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng~~~dn~~~g~~ep~~~k 512 (545)
T KOG0360|consen 434 SREQ-LAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLINGKIRDNKSAGSFEPPIVK 512 (545)
T ss_pred cHHH-HHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhccCCccccchhhCccccccEeecceeeeeeccceee
Confidence 7775 68888999999999999999999999999999884 3489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 549 RCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 549 ~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
...|+.|++.+..+||+|++|.-. |+.+.
T Consensus 513 vksLk~ateaaitiLriD~li~l~-~~~~~ 541 (545)
T KOG0360|consen 513 VKSLKFATEAAITILRIDDLIKLL-PELQV 541 (545)
T ss_pred hhhhHHHHHhhhhhcchhhhhhcC-ccccc
Confidence 999999999999999999999887 76543
No 41
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-71 Score=564.85 Aligned_cols=459 Identities=22% Similarity=0.303 Sum_probs=415.3
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
..++..|..++..|++|.+++||.++++|||+.|.||+.+ .|.+..||||..|+++|++.||. |+-+.+++.+||
T Consensus 11 ~~~re~g~kvq~~ni~aak~iadvirtclgp~am~kmlld~~g~i~~tndg~ailrei~Vahpa----aksmiel~rtqd 86 (527)
T KOG0364|consen 11 NTKRESGRKVQLGNIQAAKAIADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQD 86 (527)
T ss_pred ccCcCccccccccchhhHHHHHHHHHHhcChHHHHHHhhccCCceEEecCcHHHHHHHhhcCcc----hhhHhhhhhccc
Confidence 3445567888889999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcC------C
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAG------N 200 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~------~ 200 (588)
+|+|||||||++|++++|.++..++++|+||+.|++.|.+|++.++..+++++.|++ +...+..+..++.. +
T Consensus 87 eevgdgttsvi~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~~km~~vi~~~v~tk~~~~~ 166 (527)
T KOG0364|consen 87 EEVGDGTTSVIILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQAKMLRVINSSVGTKFNSRW 166 (527)
T ss_pred ccccCCceeeeeehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccHHHHHhhhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999988877 56677878777654 3
Q ss_pred chhHHHHHHHHHHHhccC-Cc-E------E--EecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 201 DEFIGNLIADAIIKIGAD-GV-I------L--IESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~-g~-I------~--v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
.+.++++..+|+++|+.+ |. | + +.+|+.++|| ++++|+.+.+...||. |+..++||+|+++|
T Consensus 167 ~~~~~~lal~avk~V~~~~g~e~dik~y~kveKvpgg~l~~s-~vl~Gv~~nkdv~Hpk-------mrr~IenprivLlD 238 (527)
T KOG0364|consen 167 SDLICNLALDAVKTVGVENGREIDIKRYAKVEKVPGGLLEDS-CVLKGVMINKDVTHPK-------MRRAIENPRIVLLD 238 (527)
T ss_pred cchhhhHHHHHHHHhhhccCceechhhhccccccCccccccc-ceecceeeccccCcHH-------HHHHhhcCcEEEec
Confidence 578899999999999875 32 2 2 2589999999 9999999999999995 78899999999999
Q ss_pred cccccH------------------------HhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCC
Q 007834 271 QKISTV------------------------KEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (588)
Q Consensus 271 ~~i~~~------------------------~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~ 326 (588)
+++.+- +++..+++.+....++||++.++++|.|.++|.++++ . +
T Consensus 239 ~~LeykkGeSqtnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~i------T-----~ 307 (527)
T KOG0364|consen 239 CPLEYKKGESQTNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANI------T-----A 307 (527)
T ss_pred CCccCCCCccccceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCc------h-----h
Confidence 996421 1234567788889999999999999999999998864 3 3
Q ss_pred CCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCcccee-EEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007834 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAAT 402 (588)
Q Consensus 327 ~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~-~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~ 402 (588)
++++|+.+-.+++++||+++++ +++++...+.|+ ||.+++ +++.|+||..|.+|+
T Consensus 308 ~rr~rKtDn~ria~acga~iv~-----rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~pk---------------- 366 (527)
T KOG0364|consen 308 IRRLRKTDNNRIARACGARIVN-----RPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEPK---------------- 366 (527)
T ss_pred hhhhhccccchhhhhcCceecc-----ChhhCchhccCcccceeeeeccCchhhhhhhhcCCCc----------------
Confidence 5789999999999999999999 899999999996 678775 688999999998874
Q ss_pred hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCC
Q 007834 403 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMED 481 (588)
Q Consensus 403 ~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~ 481 (588)
.|||++||+++.+++|.+|.+.||+.++|+.+-++ ++|||||+||..|+.|.+.+....+
T Consensus 367 -------------------aCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~~~G 427 (527)
T KOG0364|consen 367 -------------------ACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSALMTG 427 (527)
T ss_pred -------------------ceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhhccc
Confidence 79999999999999999999999999999999998 9999999999999999987666666
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHH
Q 007834 482 PDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVS 557 (588)
Q Consensus 482 ~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e 557 (588)
.+ ++-+++++.||+.+|++|++|+|.+++..++.++.. ...+|+|.++|.++||.+.++|+|..+|.+..++|++
T Consensus 428 Ve-kwPY~Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~G~~~~gi~g~tg~iVDm~~~~iwep~~vK~Q~~ktave 506 (527)
T KOG0364|consen 428 VE-KWPYGAVAGALEVIPRTLIQNCGANPIRALTALRAKHKEGQRVWGIDGETGVIVDMVELGIWEPEAVKLQTGKTAVE 506 (527)
T ss_pred hh-ccchhhhhcCceeccHHHHhhcCccHHHHHHHHHHHhcCcceeecccCceeeEeeeeeccccchhhhhhhhhhHHHH
Confidence 65 588999999999999999999999999999988773 4678999999999999999999999999999999999
Q ss_pred HHHHHHchhHHhhCC
Q 007834 558 IAAVVLTTEAVLADK 572 (588)
Q Consensus 558 ~a~~lL~iD~iI~~~ 572 (588)
.+++|||+|++++.+
T Consensus 507 sa~~LLRIddIvsg~ 521 (527)
T KOG0364|consen 507 SACLLLRIDDIVSGK 521 (527)
T ss_pred HHHHHHhhhceeeee
Confidence 999999999999987
No 42
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-66 Score=528.05 Aligned_cols=450 Identities=22% Similarity=0.325 Sum_probs=400.6
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCcc
Q 007834 58 ESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGTT 136 (588)
Q Consensus 58 ~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~~GDGTT 136 (588)
.+...|++++..+.+.+++.+||+|..||+++ .|++++|+||.+.+++|+++||. |-++..++.+||+..|||||
T Consensus 17 aal~iNis~AigLqsV~~snlgPkgt~KmlvsgagdIklakdgnvLl~emQiqhPT----a~lIakaatAqdd~tGDGtt 92 (520)
T KOG0359|consen 17 AALALNISAAIGLQSVLVLNLGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQHPT----ASLIAKVATAQDDITGDGTT 92 (520)
T ss_pred cceeeccccccceeeeehhccCchhHHHhccCCccceEEEecchhhHHHHhhcCch----HHHHHHHHHHhhcccCCCcc
Confidence 46667888999999999999999999999999 99999999999999999999997 99999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCc------hhHHHHHHH
Q 007834 137 TAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGND------EFIGNLIAD 210 (588)
Q Consensus 137 svvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~------~~l~~li~d 210 (588)
|+|+|.++|+++|..+++.|+||..|..||+.|.+.++++|++.+.+++ ++.|..+|+|+++++ +.+++++++
T Consensus 93 S~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~-~~~L~~va~tsl~Tkv~~~la~~lt~~vv~ 171 (520)
T KOG0359|consen 93 SVVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVD-RETLKDVARTSLRTKVHAELADVLTPIVVD 171 (520)
T ss_pred eEEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchh-HHHHHHHHHHhhcCcccHHHHhHhHHHHHh
Confidence 9999999999999999999999999999999999999999998777774 789999999999873 678888999
Q ss_pred HHHHhcc-CCcEEE-------ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHH-----
Q 007834 211 AIIKIGA-DGVILI-------ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVK----- 277 (588)
Q Consensus 211 A~~~v~~-~g~I~v-------~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~----- 277 (588)
|+..+.+ ++.|.+ -+..+..|+ .+++|+++|||-+||. ||+.++|++||++|.++++.+
T Consensus 172 aVl~i~~~~~~idl~mveim~mq~~s~~dT-~~v~glvLdhg~rHpd-------mp~~~e~a~iL~~NvSLEYEK~Eins 243 (520)
T KOG0359|consen 172 SVLCIRRQEEPIDLFMVEIMEMQHKSLHDT-SLVQGLVLDHGARHPD-------MPRRVEDAYILICNVSLEYEKPEINS 243 (520)
T ss_pred hheeeccCCCCcchhHHHhhhhccCchhhh-HHhhhhhccCCCCCcc-------cccchhceEEEEeecccccccccccc
Confidence 9988763 332221 145667777 7999999999999996 899999999999998865443
Q ss_pred --------h---H--------HHHHHHHhcCCC----CEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHH
Q 007834 278 --------E---I--------VPLLEKTTQLSV----PLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKAL 334 (588)
Q Consensus 278 --------~---l--------~~~le~i~~~~~----~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~ 334 (588)
| + .+.+.++.+.+. -+||.|++||+..+..|.++.+ +| +++.++..
T Consensus 244 gffYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~gI------la-----LRRAKRRN 312 (520)
T KOG0359|consen 244 GFFYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKSGI------LA-----LRRAKRRN 312 (520)
T ss_pred chhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhcch------HH-----HHHHhhhh
Confidence 1 1 122334443331 5668889999999999987653 44 46778899
Q ss_pred HHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007834 335 LQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKL 411 (588)
Q Consensus 335 Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 411 (588)
|||+..+|||..+. +++|++|+.||.||.|.+ ++++|+|+++|.+|
T Consensus 313 mERL~lacGG~a~n-----svddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p-------------------------- 361 (520)
T KOG0359|consen 313 MERLVLACGGEAVN-----SVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNP-------------------------- 361 (520)
T ss_pred HHHHHHhhccceec-----ccccCChhhccccceeEEeeccceeeEeeecCCCC--------------------------
Confidence 99999999999999 899999999999999974 89999999999987
Q ss_pred HHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHH
Q 007834 412 SERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADI 490 (588)
Q Consensus 412 ~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~ 490 (588)
+.|||+|+|||+..+.+.|++++|++++++++++++ ++||+|++|.+++.+|+...++.++.. ++|+++
T Consensus 362 ---------~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i~Gaga~~va~~~~lr~~k~~vkgra-~~g~~a 431 (520)
T KOG0359|consen 362 ---------SSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGRHLRESKKSVKGRA-YLGVKA 431 (520)
T ss_pred ---------cceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHHHHHHhhhccCchh-hhhHHH
Confidence 479999999999999999999999999999999998 999999999999999998888888876 699999
Q ss_pred HHHHHHHHHHHHHHhcCCChhHHHHhhhcC--CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHH
Q 007834 491 VAKALIVPAISIATNAGVDGTIVVEKTRTS--DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAV 568 (588)
Q Consensus 491 ~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~--~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~i 568 (588)
|++||..+|++|++|+|+|+.+.+.+|... ....|+|+.+|+..+....||||.+.||++.|.+++-+|+.||-+|+|
T Consensus 432 fa~all~ipk~La~nsg~D~qe~l~~l~~e~~~~~~g~dl~~g~~~~~~~~gi~Dny~v~~~~l~s~~via~nlLlvDEi 511 (520)
T KOG0359|consen 432 FANALLVIPKTLAKNSGLDEQETLVSLKKEHEVTLRGLDLFRGEECDPSRKGIYDNYSVKKQLLRSEAVIATNLLLVDEI 511 (520)
T ss_pred HHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhhhhcccccccCCccchhhccccchHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999998775 345699999999999999999999999999999999999999999999
Q ss_pred hhCC
Q 007834 569 LADK 572 (588)
Q Consensus 569 I~~~ 572 (588)
|...
T Consensus 512 ~rAG 515 (520)
T KOG0359|consen 512 IRAG 515 (520)
T ss_pred HHcc
Confidence 9875
No 43
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.96 E-value=1.4e-28 Score=242.82 Aligned_cols=192 Identities=33% Similarity=0.429 Sum_probs=170.5
Q ss_pred HHHHHHHHHhcC-----CchhHHHHHHHHHHHhcc------CCcEEE--ecCCCcccceeeeeceEEeeccCCccccccc
Q 007834 188 DDIKAVASISAG-----NDEFIGNLIADAIIKIGA------DGVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQ 254 (588)
Q Consensus 188 ~~l~~va~ts~~-----~~~~l~~li~dA~~~v~~------~g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~ 254 (588)
+.|.++|+|+++ +++.+++++++|+..+++ .+.|++ .+|+++.|| ++++|++|+++|.||+
T Consensus 2 ~~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds-~li~Gv~~~~~~~~~~----- 75 (209)
T cd03333 2 ELLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDS-ELVVGVVFDKGYASPY----- 75 (209)
T ss_pred hHHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhc-eeEeeEEEeccccCCC-----
Confidence 468999999998 789999999999999987 345555 589999999 9999999999999997
Q ss_pred ccccccccceeEEEeccccccHHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHH
Q 007834 255 EKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKAL 334 (588)
Q Consensus 255 ~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~ 334 (588)
|+++++||+|+++++++++ +|+++++|++.++++|..++ |+||++ +++.+
T Consensus 76 --m~~~~~n~~Ill~~~~le~-----------------vii~~~~I~~~al~~l~~~~------I~~v~~-----~~~~~ 125 (209)
T cd03333 76 --MPKRLENAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKAG------IMAVRR-----VKKED 125 (209)
T ss_pred --CCeEcCCCcEEEEeCCeeE-----------------EEEecCcccHHHHHHHHHCC------CEEEEe-----CCHHH
Confidence 6789999999999999987 89999999999999998754 588875 55899
Q ss_pred HHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 007834 335 LQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKL 411 (588)
Q Consensus 335 Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l 411 (588)
|+|||++|||++++ ++++++++.||+|+.+++. +++++++.+|..+
T Consensus 126 l~~ia~~tga~ii~-----~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~~-------------------------- 174 (209)
T cd03333 126 LERIARATGATIVS-----SLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKGG-------------------------- 174 (209)
T ss_pred HHHHHHHHCCEEec-----ccccCChhhceeeeEEEEEEECCeEEEEEEcCCCC--------------------------
Confidence 99999999999999 7889999999999999874 4568889887542
Q ss_pred HHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhc
Q 007834 412 SERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDE 455 (588)
Q Consensus 412 ~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~ 455 (588)
..|||+|||+|+.+++|.||+++||++++++++++
T Consensus 175 ---------~~~tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 175 ---------KAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred ---------CEEEEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 57999999999999999999999999999999875
No 44
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.95 E-value=1.1e-26 Score=236.39 Aligned_cols=197 Identities=18% Similarity=0.169 Sum_probs=168.1
Q ss_pred chhHHHHHHHHHHHhccC----------CcEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEE
Q 007834 201 DEFIGNLIADAIIKIGAD----------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~----------g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 268 (588)
.+.|++++++|+..+.++ ..|++ .+|++++|| ++++|+++++...|+. ||++++||+|++
T Consensus 20 ~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS-~li~Gvvi~k~~~~~~-------m~~~i~n~kIll 91 (261)
T cd03334 20 LDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDS-EVVDGVVFTKNVAHKR-------MPSKIKNPRILL 91 (261)
T ss_pred HHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHc-EEEeeEEEeCCCCCcc-------CCcccCCCcEEE
Confidence 588999999999988532 12444 589999999 9999999999988864 889999999999
Q ss_pred eccccccHH-----------------hHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCCh
Q 007834 269 TDQKISTVK-----------------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGK 331 (588)
Q Consensus 269 ~d~~i~~~~-----------------~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~ 331 (588)
++++++..+ .+.++++++.+.|+++|+|+++|++.|+++|.+++ |++|+++.
T Consensus 92 l~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~g------I~~v~~v~----- 160 (261)
T cd03334 92 LQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAG------ITLVLNVK----- 160 (261)
T ss_pred EeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHCC------CEEEEecC-----
Confidence 999875421 23457888999999999999999999999998865 47776544
Q ss_pred hHHHHHHHHHhCCeEeeccCCCc-ccCCCCccceeEEEEEE---ec-----ceEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007834 332 KALLQDIALMTGADFLSGELGLT-LAGATSDQLGIARKVTV---KS-----NSTTIVADPYTKAEIQARIMQIKKDLAAT 402 (588)
Q Consensus 332 ~~~Le~ia~~tG~~ii~~~~~~~-l~~l~~~~lG~~~~v~~---~~-----~~~~~i~g~~~~~~i~~ri~~l~~~l~~~ 402 (588)
+.+|++||++|||++++ + .++++++.||+|+.|++ ++ +++++|++|..+
T Consensus 161 ~~dl~rIa~~tGa~ii~-----~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~----------------- 218 (261)
T cd03334 161 PSVLERISRCTGADIIS-----SMDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKE----------------- 218 (261)
T ss_pred HHHHHHHHHHhCCEEec-----ChhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCC-----------------
Confidence 89999999999999999 6 45788999999999986 33 589999998653
Q ss_pred hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 007834 403 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG 456 (588)
Q Consensus 403 ~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g 456 (588)
..+||+|||+|+.+++|.+|+++||+++++++..++
T Consensus 219 ------------------~~~TIlLRG~t~~~lde~eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 219 ------------------LGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLET 254 (261)
T ss_pred ------------------ceeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 479999999999999999999999999999998876
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.15 E-value=3.2e-10 Score=132.79 Aligned_cols=206 Identities=19% Similarity=0.244 Sum_probs=160.7
Q ss_pred chhHHHHHHHHHHHhccC----------CcE--EEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEE
Q 007834 201 DEFIGNLIADAIIKIGAD----------GVI--LIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~----------g~I--~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 268 (588)
.+.+..++.+|...+.++ +.+ +.+.||+..|| +++.|+++.+...|- .|..++++|+|++
T Consensus 334 ~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS-~vi~Gvv~sKn~~~k-------~M~~~~e~prill 405 (1598)
T KOG0230|consen 334 LDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDS-EVIKGVVCSKNVAHK-------RMATKYENPRILL 405 (1598)
T ss_pred HHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccc-eeeeEEEeecchhhh-------hhhhhccCCceEE
Confidence 466777888888877664 234 44688999999 999999999987774 4788999999999
Q ss_pred ecccccc---------HHh--------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCCh
Q 007834 269 TDQKIST---------VKE--------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGK 331 (588)
Q Consensus 269 ~d~~i~~---------~~~--------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~ 331 (588)
+.+++.+ .+. +...+.++...+++++++.++|++.|..+|... |+.-+ -+++
T Consensus 406 l~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k---~I~lv--------lnvK 474 (1598)
T KOG0230|consen 406 LGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDK---GISLV--------LNVK 474 (1598)
T ss_pred EecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhcc---CeEEE--------Eecc
Confidence 9887532 222 234567788889999999999999999988653 33322 2677
Q ss_pred hHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe--------cceEEEEeCCCChHHHHHHHHHHHHHHhhhh
Q 007834 332 KALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK--------SNSTTIVADPYTKAEIQARIMQIKKDLAATD 403 (588)
Q Consensus 332 ~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~--------~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~ 403 (588)
...|+||+++|||.|++ +++.++...||.|..+++. ...+++|+||..+.
T Consensus 475 ~s~leRIsR~tga~I~~-----siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~l----------------- 532 (1598)
T KOG0230|consen 475 RSLLERISRCTGADIVP-----SVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPL----------------- 532 (1598)
T ss_pred HHHHHHHHHHhcCceec-----chhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCC-----------------
Confidence 89999999999999999 7888999999999999852 23567888887642
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHH-hcCcccCCchHH
Q 007834 404 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAM-DEGIVPGGGATY 465 (588)
Q Consensus 404 ~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al-~~gvvpGGGa~e 465 (588)
.|||++||.+..++.+.|+-++-++-++-+.. +.-++.-=|+..
T Consensus 533 ------------------G~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi 577 (1598)
T KOG0230|consen 533 ------------------GCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASI 577 (1598)
T ss_pred ------------------CceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCcc
Confidence 59999999999999999999998888776554 434666555543
No 46
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=97.27 E-value=0.00045 Score=77.31 Aligned_cols=89 Identities=19% Similarity=0.137 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCCC-EEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHH-HHHHHHhCCeEeeccCCCccc
Q 007834 279 IVPLLEKTTQLSVP-LLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALL-QDIALMTGADFLSGELGLTLA 356 (588)
Q Consensus 279 l~~~le~i~~~~~~-lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~L-e~ia~~tG~~ii~~~~~~~l~ 356 (588)
+..+++.+.+.+.+ +++++++|+|.+.++|..+. |.+++ ++.++++ ++|+.++||++++ .++
T Consensus 259 l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~------Ilt~~-----~v~~~dl~~~l~~~~ga~~v~-----~~~ 322 (524)
T COG0459 259 LATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIA------ILTGR-----RVKKEDLGERLAKLGGAKIVS-----VLK 322 (524)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhc------ceecc-----eecchhhHHHHHHccCceEEe-----ecc
Confidence 34566778889999 99999999999999998764 46654 4457888 7999999999999 799
Q ss_pred CCCCcccee--EEEEEE---ecceEEEEeCCC
Q 007834 357 GATSDQLGI--ARKVTV---KSNSTTIVADPY 383 (588)
Q Consensus 357 ~l~~~~lG~--~~~v~~---~~~~~~~i~g~~ 383 (588)
++++..+|. |+.|+. ++++++++.++.
T Consensus 323 d~t~~~~G~~~~~~ve~~~~~~~~~~~~~~~~ 354 (524)
T COG0459 323 DLTTIVLGEGAAGLVEETKTGDYDMEKLQERK 354 (524)
T ss_pred cCceeecCccccceEEEeeccchhhhhhhhhh
Confidence 999999999 999985 455666666654
No 47
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=44.69 E-value=13 Score=42.13 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=50.3
Q ss_pred CCCEEEEecCCch-----HHHHHHHHHhhhccc----eEEEeeCCCCCCChhHHHHHHHHHhCCeEeec
Q 007834 290 SVPLLIIAEDISS-----QVLETLVMNKIRGLL----NVAVVKCPGFGDGKKALLQDIALMTGADFLSG 349 (588)
Q Consensus 290 ~~~lvI~~~~i~~-----~al~~L~~n~l~g~~----~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~ 349 (588)
..++.+..+++++ +++..++.++++++. ++++++++ +++.....|++.+++++.++..+
T Consensus 247 ~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~~~v~~~ 314 (522)
T TIGR02345 247 KDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCAGRVSDE 314 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEEecCCHH
Confidence 4578888899988 888888889888755 88999998 89999999999999998887764
No 48
>smart00574 POX domain associated with HOX domains.
Probab=41.45 E-value=83 Score=29.13 Aligned_cols=59 Identities=19% Similarity=0.086 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhh
Q 007834 405 AYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIK 476 (588)
Q Consensus 405 ~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~ 476 (588)
.-|+..++.+.++|- .+++|.+++++-...-++..+..- .|+|+|++-.+.+-+|+..+
T Consensus 69 ~~~r~e~q~kk~kLl-------------~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~S 128 (140)
T smart00574 69 TAERQELQRKKAKLL-------------SMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTIS 128 (140)
T ss_pred hhHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 456777788877762 457888888887777777777664 78999999888877776544
No 49
>PF07526 POX: Associated with HOX; InterPro: IPR006563 This domain in found exclusively in plant proteins, associated with HOX domains which may suggest these proteins are homeodomain transcription factors.
Probab=24.97 E-value=1.8e+02 Score=26.98 Aligned_cols=58 Identities=19% Similarity=0.112 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhh
Q 007834 406 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIK 476 (588)
Q Consensus 406 ~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~ 476 (588)
-++..++.+.++|- .+++|..++++-...-++..+..- .|.|.|++-.+.+-+|+..+
T Consensus 70 ~~~~e~q~kK~KLl-------------~mL~eVd~RY~qY~~Qmq~VvssFe~vaG~gaA~~YtalAlqamS 128 (140)
T PF07526_consen 70 AERQELQRKKAKLL-------------SMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAAPYTALALQAMS 128 (140)
T ss_pred hhHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhHHHHHHHHH
Confidence 45666677777662 456777777776666666666554 68899999888888887654
No 50
>KOG1593 consensus Asparaginase [Amino acid transport and metabolism]
Probab=22.48 E-value=1.7e+02 Score=30.06 Aligned_cols=57 Identities=16% Similarity=0.056 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHhcC---cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcC
Q 007834 439 KLRIEDAKNATFAAMDEG---IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAG 507 (588)
Q Consensus 439 ~~~i~DAl~~~r~al~~g---vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG 507 (588)
-|++.||+++++..++.- ++.|-|++++.-+.-+.. +.++++|.+ +....+.++|+.
T Consensus 105 lrrIkdai~vA~~Vleht~HTlLvGe~At~FA~smGf~~--e~Lst~es~----------~~~s~W~~~nCQ 164 (349)
T KOG1593|consen 105 LRRIKDAIRVARHVLEHTQHTLLVGESATAFANSMGFKE--EDLSTEESK----------SWWSDWKAENCQ 164 (349)
T ss_pred HHHHHHHHHHHHHHHhhhheeeeecccHHHHHHhcCCCc--cccCCHHHH----------HHHHHHHHhcCC
Confidence 478999999999999873 999999999998877765 334444321 223356777775
Done!