Query 007834
Match_columns 588
No_of_seqs 161 out of 1460
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 11:39:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 2E-123 5E-128 1031.0 54.4 525 50-577 2-527 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 1E-122 3E-127 1025.7 56.7 534 49-585 1-537 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-123 4E-128 1029.8 45.1 525 49-578 1-526 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 7E-123 2E-127 1026.5 45.2 527 49-578 2-530 (545)
5 3p9d_C T-complex protein 1 sub 100.0 3E-104 9E-109 883.5 37.6 490 51-575 12-588 (590)
6 3ko1_A Chaperonin; 9-fold symm 100.0 7E-103 3E-107 869.1 46.6 480 39-585 13-545 (553)
7 3ruv_A Chaperonin, CPN; double 100.0 4E-102 1E-106 862.8 46.6 462 50-576 11-522 (543)
8 1a6d_B Thermosome (beta subuni 100.0 7E-102 3E-106 861.3 46.4 470 51-585 14-535 (543)
9 3iyg_B T-complex protein 1 sub 100.0 4E-101 1E-105 850.2 51.1 459 51-575 3-513 (513)
10 3p9d_A T-complex protein 1 sub 100.0 4E-102 1E-106 864.6 41.5 470 49-578 15-553 (559)
11 3p9d_E T-complex protein 1 sub 100.0 6E-102 2E-106 863.8 41.0 483 32-572 19-558 (562)
12 1q3q_A Thermosome alpha subuni 100.0 5E-101 2E-105 855.2 46.7 462 50-576 15-528 (548)
13 3iyg_A T-complex protein 1 sub 100.0 2E-100 5E-105 848.3 50.4 463 51-572 3-528 (529)
14 1a6d_A Thermosome (alpha subun 100.0 3E-101 9E-106 856.6 44.3 460 51-576 15-525 (545)
15 3iyg_H T-complex protein 1 sub 100.0 3E-100 1E-104 842.7 50.6 461 51-572 4-514 (515)
16 3iyg_E T-complex protein 1 sub 100.0 9E-100 3E-104 840.2 52.6 458 50-571 2-514 (515)
17 3p9d_D T-complex protein 1 sub 100.0 2E-101 6E-106 855.0 37.0 464 49-572 10-528 (528)
18 3iyg_D T-complex protein 1 sub 100.0 7E-100 2E-104 841.1 49.1 458 51-572 4-518 (518)
19 3p9d_G T-complex protein 1 sub 100.0 6E-101 2E-105 854.1 34.1 467 51-580 17-534 (550)
20 3p9d_B T-complex protein 1 sub 100.0 6E-101 2E-105 851.5 32.3 466 50-581 9-526 (527)
21 3iyg_G T-complex protein 1 sub 100.0 1.3E-98 4E-103 830.4 50.2 457 52-572 3-514 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 3.2E-98 1E-102 827.2 50.0 456 52-572 4-512 (512)
23 3iyg_Z T-complex protein 1 sub 100.0 1.4E-97 5E-102 822.1 48.0 455 52-571 4-516 (517)
24 3p9d_H T-complex protein 1 sub 100.0 9.9E-99 3E-103 839.0 28.8 466 52-582 19-557 (568)
25 3p9d_F T-complex protein 1 sub 100.0 1.6E-97 5E-102 827.1 35.2 461 51-576 10-540 (546)
26 3aq1_B Thermosome subunit; gro 100.0 1.1E-91 3.8E-96 772.6 39.8 428 86-578 1-481 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 6.6E-47 2.3E-51 356.4 16.0 193 233-425 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.6E-45 5.5E-50 347.6 17.6 188 236-423 12-199 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 5.5E-35 1.9E-39 263.4 14.9 144 238-381 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 5.7E-23 2E-27 196.3 14.1 146 229-433 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 2E-19 6.8E-24 168.6 14.4 127 236-385 1-154 (159)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.6e-123 Score=1030.95 Aligned_cols=525 Identities=43% Similarity=0.719 Sum_probs=512.8
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
+|++.||.++|.+|++||+.|+++|+|||||+||+|||++ .|+|+|||||+||+|+|+++||+||+||||++++|++||
T Consensus 2 ~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd 81 (547)
T 1kp8_A 2 AKDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81 (547)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhc
Confidence 6899999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li 208 (588)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.++|++|++++++|++++
T Consensus 82 ~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~li 161 (547)
T 1kp8_A 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLI 161 (547)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhc
Q 007834 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (588)
Q Consensus 209 ~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~ 288 (588)
+||+.+++++|.|++++|++++||+++++||+|+++|+||||++++++|+++++||||+++|++|+++++++++++++.+
T Consensus 162 adAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~ 241 (547)
T 1kp8_A 162 AEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAK 241 (547)
T ss_dssp HHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHG
T ss_pred HHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEE
Q 007834 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARK 368 (588)
Q Consensus 289 ~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~ 368 (588)
+|+||||++++|+++|+++|+.|+++|.++|+|||+|+||+.++.+|+|||++|||++++++.|++++++++++||+|+.
T Consensus 242 ~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~ 321 (547)
T 1kp8_A 242 AGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKR 321 (547)
T ss_dssp GGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEE
T ss_pred cCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeE
Confidence 99999999999999999999999999999999999999999999999999999999999998999999999999999999
Q ss_pred EEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 007834 369 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 448 (588)
Q Consensus 369 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~ 448 (588)
|+++++++++|+||++++.+++|+++|+.+++.++++|+||+|+||+++|++++|||+|||+|+.+++|+||++|||||+
T Consensus 322 v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~ 401 (547)
T 1kp8_A 322 VVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 401 (547)
T ss_dssp EEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeEEc
Q 007834 449 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNA 528 (588)
Q Consensus 449 ~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gid~ 528 (588)
+|+++++|+|||||++|++|+.+|++++. .. .++++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+
T Consensus 402 ~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~-g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~~~~~G~d~ 479 (547)
T 1kp8_A 402 TRAAVEEGVVAGGGVALIRVASKLADLRG-QN-ADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA 479 (547)
T ss_dssp HHHHHHHCEEETTTHHHHHHHHHTTTCCC-SS-HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHSCTTEEEET
T ss_pred HHHhccCCEEeCCcHHHHHHHHHHHHHhc-cC-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCEeEeC
Confidence 99999999999999999999999999876 44 45679999999999999999999999999999999998778899999
Q ss_pred cCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCC
Q 007834 529 MTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 577 (588)
Q Consensus 529 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~ 577 (588)
.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |+++
T Consensus 480 ~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~-~~~~ 527 (547)
T 1kp8_A 480 ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDL-PKND 527 (547)
T ss_dssp TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC-CC--
T ss_pred CCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecC-CccC
Confidence 99999999999999999999999999999999999999999998 8765
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=9.9e-123 Score=1025.66 Aligned_cols=534 Identities=49% Similarity=0.769 Sum_probs=512.7
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
++|++.||.++|.+|++||..|+++|+|||||+||+|||++ .|+++|||||+||||+|+++||+||+||||++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (543)
T 1we3_A 1 MAKILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKT 80 (543)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhh
Confidence 46899999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (588)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~l 159 (543)
T 1we3_A 81 NDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKL 159 (543)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred heecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHh
Q 007834 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (588)
Q Consensus 208 i~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~ 287 (588)
++||+.+++++|.|++++|++++|++++++|++|+++|+||||++++++|+++++||||+++|++|+++++++++++++.
T Consensus 160 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~ 239 (543)
T 1we3_A 160 IADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVA 239 (543)
T ss_dssp HHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEE
Q 007834 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (588)
Q Consensus 288 ~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~ 367 (588)
++|+||||++++|+++|+++|+.|+++|.++|+|||+|+||+.++.+|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~ 319 (543)
T 1we3_A 240 QTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAE 319 (543)
T ss_dssp TTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEE
T ss_pred hcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 007834 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 447 (588)
Q Consensus 368 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~ 447 (588)
.|+++++++++|+||++++.+++|+++|+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||++|||||
T Consensus 320 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~ 399 (543)
T 1we3_A 320 RVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALN 399 (543)
T ss_dssp EEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc--CCCcee
Q 007834 448 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT--SDWRFG 525 (588)
Q Consensus 448 ~~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~--~~~~~G 525 (588)
++|+++++|+|||||++|++|+.+|++++.+..+ ++++++++|++||+.||++||+|||+|+.+++++|++ .+.++|
T Consensus 400 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g-~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G 478 (543)
T 1we3_A 400 ATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEG-DEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYG 478 (543)
T ss_dssp HHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEE
T ss_pred HHHHHhccCcCCCccHHHHHHHHHHHHHhhccCc-hHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEE
Confidence 9999999999999999999999999999876555 4579999999999999999999999999999999998 567899
Q ss_pred EEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCCCCCCCCC
Q 007834 526 YNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPG 585 (588)
Q Consensus 526 id~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~~~~~~~~ 585 (588)
||+.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |++++.+|+.+|
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~-~~~~~~~~~~~~ 537 (543)
T 1we3_A 479 FNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEK-PEKKESTPASAG 537 (543)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC-SCC---------
T ss_pred EeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999998 876554444443
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.1e-123 Score=1029.84 Aligned_cols=525 Identities=49% Similarity=0.736 Sum_probs=435.8
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
++|++.||.+||.+|+.|++.||++|+|||||+||+|||++ .|+++|||||+||||+|+++||++|+||||++++|++|
T Consensus 1 ~~k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~q 80 (546)
T 3rtk_A 1 MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKT 80 (546)
T ss_dssp ------------------------------------------------------------CCCHHHHHHHHHHHHHHTSC
T ss_pred CCceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhh
Confidence 47999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (588)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++++++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~l 159 (546)
T 3rtk_A 81 DDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDL 159 (546)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred hhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHh
Q 007834 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (588)
Q Consensus 208 i~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~ 287 (588)
++||+.+++++|+|+++.+++..+.+++++||+||++|+||||++++++|+++++||||+++|++|+++++++++++++.
T Consensus 160 iadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~ 239 (546)
T 3rtk_A 160 IAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVI 239 (546)
T ss_dssp HHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHH
T ss_pred HHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHH
Confidence 99999999999999998887776555999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEE
Q 007834 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (588)
Q Consensus 288 ~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~ 367 (588)
++|+|||||+++|+++|+++|+.|+++|+++|+|||+|+|++.|+.+|+|||++|||++++++.|++++++++++||+|+
T Consensus 240 ~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~ 319 (546)
T 3rtk_A 240 GAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKAR 319 (546)
T ss_dssp TTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEE
T ss_pred hcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 007834 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 447 (588)
Q Consensus 368 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~ 447 (588)
.|+++++++++|+||++++.++.|+++|+++++.++++|++|+|+||+++|+|++|||+|||+|+.+++|+||+++||||
T Consensus 320 ~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~ 399 (546)
T 3rtk_A 320 KVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVR 399 (546)
T ss_dssp EEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHH
T ss_pred EEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcCCCceeEE
Q 007834 448 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYN 527 (588)
Q Consensus 448 ~~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~~~~~Gid 527 (588)
++|+++++|+|||||++|++|+.+|++++ .++. +++++++|++||+.||++||+|||+|+.+++++|++....+|||
T Consensus 400 a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~G~d 476 (546)
T 3rtk_A 400 NAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGD-EATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLN 476 (546)
T ss_dssp HHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTT-HHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSCTTEECC
T ss_pred HHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCEeEc
Confidence 99999999999999999999999999987 4554 57999999999999999999999999999999999876669999
Q ss_pred ccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 528 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 528 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
+.+|++.||++.|||||+.||+++|++|+++|++|||+|++|..+ |++++
T Consensus 477 ~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~-~~~~~ 526 (546)
T 3rtk_A 477 AQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADK-PEKEK 526 (546)
T ss_dssp SSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred CCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCC
Confidence 999999999999999999999999999999999999999999998 87654
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=6.7e-123 Score=1026.51 Aligned_cols=527 Identities=46% Similarity=0.754 Sum_probs=470.2
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
++|++.||.++|.+|++||+.|+++|+|||||+||+|||++ .|+++|||||+||||+|+++||+||+||||++++|++|
T Consensus 2 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 81 (545)
T 1iok_A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRT 81 (545)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHG
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhh
Confidence 57999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 207 (588)
|+++||||||+||||++||+++.+++.+|+||+.|++||++|++.+++.|+++++|+++.++|.++|++|++++++|+++
T Consensus 82 d~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~l 161 (545)
T 1iok_A 82 NDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQ 161 (545)
T ss_dssp GGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHH
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHhccCCcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHh
Q 007834 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (588)
Q Consensus 208 i~dA~~~v~~~g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~ 287 (588)
++||+.+++++|.|++++|++++||+++++|++|+++|+||||++++++|+++++||||+++|++|+++++++++++++.
T Consensus 162 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~ 241 (545)
T 1iok_A 162 IAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVI 241 (545)
T ss_dssp HHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC---------
T ss_pred HHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEE
Q 007834 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIAR 367 (588)
Q Consensus 288 ~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~ 367 (588)
++|+||||++++|+++|+++|+.|+++|.++|+|||+|+||+.++.+|+|||++|||+++++++|++++++++++||+|+
T Consensus 242 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~ 321 (545)
T 1iok_A 242 QSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAK 321 (545)
T ss_dssp --CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Q 007834 368 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 447 (588)
Q Consensus 368 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~ 447 (588)
.|++++++|++|+||++++.+++|+++|+.+++.++++|+||+|+||+++|++++|||+|||+|+.+++|+||++|||||
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~ 401 (545)
T 1iok_A 322 KVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALN 401 (545)
T ss_dssp EEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC-CCceeE
Q 007834 448 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-DWRFGY 526 (588)
Q Consensus 448 ~~r~al~~gvvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~-~~~~Gi 526 (588)
++|+++++|+|||||++|++|+.+|++++. .++ ++++++++|++||+.||++||+|||+|+.+++++|++. ++++||
T Consensus 402 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g-~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~ 479 (545)
T 1iok_A 402 ATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANS-DQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGF 479 (545)
T ss_dssp HHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSH-HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEE
T ss_pred HHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCc-hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeE
Confidence 999999999999999999999999999876 444 56799999999999999999999999999999999987 678999
Q ss_pred EccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 527 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 527 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
|+.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |++++
T Consensus 480 d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~-~~~~~ 530 (545)
T 1iok_A 480 NAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEK-PEPKA 530 (545)
T ss_dssp ETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC-C----
T ss_pred eCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccC-CccCC
Confidence 9999999999999999999999999999999999999999999998 87653
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.6e-104 Score=883.52 Aligned_cols=490 Identities=21% Similarity=0.288 Sum_probs=424.2
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.++.+|.+||..|+.||+.||++|+|||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++||+
T Consensus 12 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~qd~ 87 (590)
T 3p9d_C 12 QERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRTQDE 87 (590)
T ss_dssp CCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTTHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHhhhh
Confidence 467799999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhh-hhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------
Q 007834 130 LAGDGTTTAVILAREMIKSGMLS-VSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------ 200 (588)
++||||||+||||++||+++.++ +++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++
T Consensus 88 e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~ 167 (590)
T 3p9d_C 88 EVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHW 167 (590)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGG
T ss_pred hhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999999 999999999999999999999999999999987 368999999998754
Q ss_pred chhHHHHHHHHHHHhccCCc----------------EEE--ecCCCcccceeeeeceEEeeccCCccccccccccccccc
Q 007834 201 DEFIGNLIADAIIKIGADGV----------------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD 262 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~g~----------------I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~ 262 (588)
+++|++|++||+.++++++. |++ ..|+++.|+ ++++||+|++++.||. |+++++
T Consensus 168 ~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~~-------m~~~~e 239 (590)
T 3p9d_C 168 SEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHPK-------MSRHIE 239 (590)
T ss_dssp HHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCTT-------SCSCEE
T ss_pred HHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCCC-------Ccceee
Confidence 68999999999999987643 233 469999998 9999999999998873 889999
Q ss_pred ceeEEEecccc-------------ccHHhHHHH-----------HHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccce
Q 007834 263 NAKVLITDQKI-------------STVKEIVPL-----------LEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLN 318 (588)
Q Consensus 263 n~~Ill~d~~i-------------~~~~~l~~~-----------le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~ 318 (588)
||||+++|+++ ++++++.++ ++++.++|++|||++++|+++|+++|.+|++
T Consensus 240 n~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I----- 314 (590)
T 3p9d_C 240 NPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC----- 314 (590)
T ss_dssp SCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC-----
T ss_pred eeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc-----
Confidence 99999999964 455565554 4688999999999999999999999998753
Q ss_pred EEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCcccee-EEEEE---EecceEEEEeCCCChHH-------
Q 007834 319 VAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGI-ARKVT---VKSNSTTIVADPYTKAE------- 387 (588)
Q Consensus 319 i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~-~~~v~---~~~~~~~~i~g~~~~~~------- 387 (588)
+| +++.++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|++|+||++++.
T Consensus 315 -~a-----v~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~ 383 (590)
T 3p9d_C 315 -SV-----LRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHP 383 (590)
T ss_dssp -CC-----CCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC-------------
T ss_pred -ee-----eccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCcccccccccc
Confidence 43 5788899999999999999999 799999999999 99997 57899999999999888
Q ss_pred -------------------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Q 007834 388 -------------------IQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 448 (588)
Q Consensus 388 -------------------i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~ 448 (588)
|++|+++|+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||++|||||+
T Consensus 384 ~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a 458 (590)
T 3p9d_C 384 QFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAV 458 (590)
T ss_dssp -------------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHH
T ss_pred ccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999966 4799999999999999999999999999999999
Q ss_pred HHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCc
Q 007834 449 TFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWR 523 (588)
Q Consensus 449 ~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~ 523 (588)
+|+++++| +|||||++|++|+.+|.+++.++.+.+ ++++++|++||+.||++||+|||+|+.+++.+|++. +++
T Consensus 459 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~ 537 (590)
T 3p9d_C 459 ARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQ-QWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFT 537 (590)
T ss_dssp HHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTT-HHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTT
T ss_pred HHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCC
Confidence 99999996 999999999999999999887666654 699999999999999999999999999999999873 678
Q ss_pred eeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCC
Q 007834 524 FGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQ 575 (588)
Q Consensus 524 ~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~ 575 (588)
+|||+.+|++.||++.|||||+.||+++|++|+++|++|||||++|... |+
T Consensus 538 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~-~~ 588 (590)
T 3p9d_C 538 TGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGV-RK 588 (590)
T ss_dssp CBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCC-C-
T ss_pred EeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 9999999999999999999999999999999999999999999999887 64
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=7.4e-103 Score=869.08 Aligned_cols=480 Identities=21% Similarity=0.333 Sum_probs=423.9
Q ss_pred ccchhHHhhcccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHh
Q 007834 39 SRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGA 117 (588)
Q Consensus 39 ~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~a 117 (588)
++|++++.+ ..++.+|.+||..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |
T Consensus 13 ~~~~~~l~~--~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----A 86 (553)
T 3ko1_A 13 GIPVIILKE--GSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----A 86 (553)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----H
T ss_pred CCeEEEEec--CcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----H
Confidence 567766555 3678899999999999999999999999999999999999 99999999999999999999996 9
Q ss_pred HHHHHHHHhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHH
Q 007834 118 MLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVAS 195 (588)
Q Consensus 118 kLl~~~a~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ 195 (588)
||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+
T Consensus 87 kll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~ 166 (553)
T 3ko1_A 87 KLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAM 166 (553)
T ss_dssp HHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHH
T ss_pred HHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 7899999999
Q ss_pred HhcCC------chhHHHHHHHHHHHhccC--Cc-------EEEe--cCCCcccceeeeeceEEeeccCCccccccccccc
Q 007834 196 ISAGN------DEFIGNLIADAIIKIGAD--GV-------ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSL 258 (588)
Q Consensus 196 ts~~~------~~~l~~li~dA~~~v~~~--g~-------I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~ 258 (588)
||+++ +++|++|++||+.+++++ |. |+++ .|+++.|+ ++++||+|+++|.||| |+
T Consensus 167 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~ 238 (553)
T 3ko1_A 167 TSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MP 238 (553)
T ss_dssp HHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SC
T ss_pred HHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------Cc
Confidence 99986 689999999999999885 65 7774 78899998 9999999999999998 57
Q ss_pred ccccceeEEEeccc-------------cccHHh-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhh
Q 007834 259 VEFDNAKVLITDQK-------------ISTVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIR 314 (588)
Q Consensus 259 ~~~~n~~Ill~d~~-------------i~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~ 314 (588)
++++||||+++|++ |+++++ +.++++++.++|+|||||+++|+++++++|.++.
T Consensus 239 ~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g-- 316 (553)
T 3ko1_A 239 KRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG-- 316 (553)
T ss_dssp SCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT--
T ss_pred cccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc--
Confidence 88999999999995 566666 4567889999999999999999999999998653
Q ss_pred ccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHH
Q 007834 315 GLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQAR 391 (588)
Q Consensus 315 g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~r 391 (588)
|++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|++|+||+++
T Consensus 317 ----I~~v~-----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~------ 376 (553)
T 3ko1_A 317 ----VLAVR-----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP------ 376 (553)
T ss_dssp ----CEEEC-----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS------
T ss_pred ----hhhhh-----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC------
Confidence 46765 55699999999999999999 8999999999999999964 8899999999865
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHH
Q 007834 392 IMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLE 470 (588)
Q Consensus 392 i~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~ 470 (588)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.
T Consensus 377 -----------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~ 427 (553)
T 3ko1_A 377 -----------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAK 427 (553)
T ss_dssp -----------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHH
T ss_pred -----------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHH
Confidence 379999999999999999999999999999999999 99999999999999
Q ss_pred hhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----C-CceeEEccCCcccccccCccccch
Q 007834 471 HIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----D-WRFGYNAMTGRYEDLLSAGVADPC 545 (588)
Q Consensus 471 ~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~-~~~Gid~~~g~i~d~~~~gI~Dp~ 545 (588)
+|++++.++++.+ ++++++|++||+.||++||+|||+|+.+++.+|++. + +++|||+.+|++.||++.|||||+
T Consensus 428 ~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 506 (553)
T 3ko1_A 428 KLRKYAPQVGGKE-QLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPA 506 (553)
T ss_dssp HHHHHHHHHCSHH-HHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEET
T ss_pred HHHHhccccCChh-HhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchh
Confidence 9999987666765 699999999999999999999999999999999885 2 689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCCCCCCCCC
Q 007834 546 RVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPG 585 (588)
Q Consensus 546 ~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~~~~~~~~ 585 (588)
.||+++|++|+++|++|||||++|..+ |+.++.+|+..|
T Consensus 507 ~vk~~al~~A~e~a~~iL~iD~ii~~~-~~~~~~~~~~~~ 545 (553)
T 3ko1_A 507 LVKMNAIKAATEAATLVLRIDDVVSAG-KKSGGESKTPGG 545 (553)
T ss_dssp THHHHHHHHHHHHHHHHHHEEEECCC--------------
T ss_pred hhhhhhhhhcchhheEEEehHHHHHhh-hhccCCCCCCCc
Confidence 999999999999999999999999998 877666655443
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=4.1e-102 Score=862.75 Aligned_cols=462 Identities=26% Similarity=0.372 Sum_probs=428.3
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
..++.+|.+||.+|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++||
T Consensus 11 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 86 (543)
T 3ruv_A 11 NMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQE 86 (543)
T ss_dssp SEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHHH
T ss_pred CcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 4577899999999999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------ 200 (588)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~ 166 (543)
T 3ruv_A 87 KEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKA 166 (543)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGC
T ss_pred hhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchh
Confidence 999999999999999999999999999999999999999999999999999999988 789999999999874
Q ss_pred chhHHHHHHHHHHHhccC-Cc-----EEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 201 DEFIGNLIADAIIKIGAD-GV-----ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~-g~-----I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
+++|++|++||+.+++++ |. |+++ .|+++.|+ ++++||+|+++|.||| |+++++||||+++|++
T Consensus 167 ~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~~~ 238 (543)
T 3ruv_A 167 KEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLNCA 238 (543)
T ss_dssp CHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEccc
Confidence 799999999999999987 65 7764 78899998 9999999999999998 5788999999999995
Q ss_pred -------------cccHHh-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCC
Q 007834 273 -------------ISTVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (588)
Q Consensus 273 -------------i~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~ 328 (588)
|+++++ +.++++++.++|+|||||+++|+++|+++|.++. |++|+
T Consensus 239 Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~~v~----- 307 (543)
T 3ruv_A 239 IEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG------IVAAR----- 307 (543)
T ss_dssp BSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT------CEEEC-----
T ss_pred ccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC------cEEEe-----
Confidence 455555 4567889999999999999999999999998643 46775
Q ss_pred CChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhhhhH
Q 007834 329 DGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 405 (588)
Q Consensus 329 ~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~ 405 (588)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 308 ~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------- 362 (543)
T 3ruv_A 308 RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP-------------------- 362 (543)
T ss_dssp SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC--------------------
T ss_pred eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC--------------------
Confidence 55699999999999999999 8999999999999999864 8899999999865
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhh
Q 007834 406 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 484 (588)
Q Consensus 406 ~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq 484 (588)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++.+
T Consensus 363 ---------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e- 426 (543)
T 3ruv_A 363 ---------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGRE- 426 (543)
T ss_dssp ---------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTH-
T ss_pred ---------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHH-
Confidence 379999999999999999999999999999999999 999999999999999999987777765
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC-----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHH
Q 007834 485 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 559 (588)
Q Consensus 485 ~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 559 (588)
++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|
T Consensus 427 q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a 506 (543)
T 3ruv_A 427 QLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAEST 506 (543)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999873 368999999999999999999999999999999999999
Q ss_pred HHHHchhHHhhCCCCCC
Q 007834 560 AVVLTTEAVLADKIKQP 576 (588)
Q Consensus 560 ~~lL~iD~iI~~~~p~~ 576 (588)
++|||||++|..+ |+.
T Consensus 507 ~~iL~id~ii~~~-~~~ 522 (543)
T 3ruv_A 507 EMLLRIDDVIAAE-KLR 522 (543)
T ss_dssp HHHHTCCEEEEEC----
T ss_pred HHHHhHHhheecC-ccC
Confidence 9999999999987 764
No 8
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=7.4e-102 Score=861.30 Aligned_cols=470 Identities=24% Similarity=0.363 Sum_probs=423.2
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.++.||.++|..|+.||..|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++||+
T Consensus 14 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 89 (543)
T 1a6d_B 14 TKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKTQDS 89 (543)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTCTTC
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHhcCC
Confidence 568899999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCC--HHHHHHHHHHhcCC------c
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG--RDDIKAVASISAGN------D 201 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~~~l~~va~ts~~~------~ 201 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. .+.|.++|+||+++ +
T Consensus 90 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~ 169 (543)
T 1a6d_B 90 FVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAK 169 (543)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccH
Confidence 999999999999999999999999999999999999999999999999999999974 78999999988654 5
Q ss_pred hhHHHHHHHHHHHhccC--Cc-------EEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 202 EFIGNLIADAIIKIGAD--GV-------ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~~--g~-------I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
++|++|++||+.+++++ |. |+++ +|++++|+ ++++||+|+++|.||| |+++++||||+++|
T Consensus 170 ~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~ 241 (543)
T 1a6d_B 170 DKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPG-------MPDVVKDAKIALLD 241 (543)
T ss_dssp HHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCC-------CcceecCCeEEEEe
Confidence 88999999999999876 53 7775 99999999 9999999999999998 46789999999999
Q ss_pred cc-------------cccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCC
Q 007834 271 QK-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (588)
Q Consensus 271 ~~-------------i~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~ 326 (588)
++ |++++++ .++++++.++|+||||++++|+++|+++|..|+ |+||+
T Consensus 242 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~--- 312 (543)
T 1a6d_B 242 APLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR--- 312 (543)
T ss_dssp SCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC---
T ss_pred cccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec---
Confidence 98 6667665 678999999999999999999999999999876 47774
Q ss_pred CCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhh
Q 007834 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATD 403 (588)
Q Consensus 327 ~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~ 403 (588)
++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|++|+||+++
T Consensus 313 --~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------ 367 (543)
T 1a6d_B 313 --RVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP------------------ 367 (543)
T ss_dssp --SCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS------------------
T ss_pred --cCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC------------------
Confidence 67799999999999999999 899999999999999986 48899999998764
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCCh
Q 007834 404 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDP 482 (588)
Q Consensus 404 ~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~ 482 (588)
+.|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++.
T Consensus 368 -----------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~ 430 (543)
T 1a6d_B 368 -----------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGR 430 (543)
T ss_dssp -----------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSS
T ss_pred -----------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCCh
Confidence 589999999999999999999999999999999999 99999999999999999998766665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHH
Q 007834 483 DEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSI 558 (588)
Q Consensus 483 eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~ 558 (588)
+ ++++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++
T Consensus 431 ~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~ 509 (543)
T 1a6d_B 431 Q-QLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEA 509 (543)
T ss_dssp H-HHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHH
Confidence 4 699999999999999999999999999999999863 46899999999999999999999999999999999999
Q ss_pred HHHHHchhHHhhCCCCCCCCCCCCCCC
Q 007834 559 AAVVLTTEAVLADKIKQPKPAVPQVPG 585 (588)
Q Consensus 559 a~~lL~iD~iI~~~~p~~~~~~~~~~~ 585 (588)
|++|||||++|... |+..++.|.++|
T Consensus 510 a~~iL~id~iI~~~-~~~~~~~~~~~~ 535 (543)
T 1a6d_B 510 AIMILRIDDVIATK-SSSSSSNPPKSG 535 (543)
T ss_dssp HHHHHHEEEEEC---------------
T ss_pred HHHHHHHHHHHhcC-ccCCCCCCCCCC
Confidence 99999999999998 877666666666
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.9e-101 Score=850.21 Aligned_cols=459 Identities=21% Similarity=0.296 Sum_probs=428.2
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C--CCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S--DKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~--g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
.++.||.++|.+|+.||+.||++|||||||+||+|||++ . |+++|||||+||||+|+++|| +|||++++|++|
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp----~Akll~e~a~~q 78 (513)
T 3iyg_B 3 ADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNP----AAKVLVDMSRVQ 78 (513)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCH----HHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999 8 999999999999999999999 499999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC-----CHHHHHHHHHHhcC---
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-----GRDDIKAVASISAG--- 199 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~~~l~~va~ts~~--- 199 (588)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++
T Consensus 79 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~ 158 (513)
T 3iyg_B 79 DDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKL 158 (513)
T ss_pred hhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999999999999999999999987 57899999998875
Q ss_pred ---CchhHHHHHHHHHHHhccC---CcEEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecc
Q 007834 200 ---NDEFIGNLIADAIIKIGAD---GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (588)
Q Consensus 200 ---~~~~l~~li~dA~~~v~~~---g~I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~ 271 (588)
++++|++|++||+.+++++ +.|+++ .|+++.|| ++++||+|+++|.|| |+++++||||+++|+
T Consensus 159 ~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~ 229 (513)
T 3iyg_B 159 LTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANT 229 (513)
T ss_pred cccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEcC
Confidence 4589999999999999987 778774 69999998 999999999999987 678999999999998
Q ss_pred c--------------cccHHhHHH-----------HHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCC
Q 007834 272 K--------------ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (588)
Q Consensus 272 ~--------------i~~~~~l~~-----------~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~ 326 (588)
+ +++++++.+ +++++.++|+|||||+++|+++++++|..++ |+|||+|+
T Consensus 230 ~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~------I~av~~~~ 303 (513)
T 3iyg_B 230 GMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAG------VMAIEHAD 303 (513)
T ss_pred CcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcC------ceEEecCC
Confidence 4 556666643 6889999999999999999999999998754 69999888
Q ss_pred CCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhhh
Q 007834 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATD 403 (588)
Q Consensus 327 ~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~ 403 (588)
+.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|+||+++
T Consensus 304 -----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------ 355 (513)
T 3iyg_B 304 -----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALG------------------ 355 (513)
T ss_pred -----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCCC------------------
Confidence 57899999999999999 89999999999999998 578999999998653
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCCh
Q 007834 404 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDP 482 (588)
Q Consensus 404 ~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~ 482 (588)
++|||+|||+|+.+++|+||++|||||++|++++++ +|||||++|++|+.+|++++.+.++.
T Consensus 356 -----------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~ 418 (513)
T 3iyg_B 356 -----------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGK 418 (513)
T ss_pred -----------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcH
Confidence 589999999999999999999999999999999995 99999999999999999998777776
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHH
Q 007834 483 DEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSI 558 (588)
Q Consensus 483 eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~ 558 (588)
+ ++++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++
T Consensus 419 ~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~ 497 (513)
T 3iyg_B 419 E-AVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEA 497 (513)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHH
Confidence 4 699999999999999999999999999999999874 56899999999999999999999999999999999999
Q ss_pred HHHHHchhHHhhCCCCC
Q 007834 559 AAVVLTTEAVLADKIKQ 575 (588)
Q Consensus 559 a~~lL~iD~iI~~~~p~ 575 (588)
|++|||||++|..+ |+
T Consensus 498 a~~iL~id~ii~~~-~~ 513 (513)
T 3iyg_B 498 AEVILRVDNIIKAA-PR 513 (513)
T ss_pred HHHHHHHHHHHhcC-CC
Confidence 99999999999987 64
No 10
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=4.3e-102 Score=864.60 Aligned_cols=470 Identities=21% Similarity=0.337 Sum_probs=434.3
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
..+++.||.++|.+|+.||+.||++|||||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++|
T Consensus 15 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 90 (559)
T 3p9d_A 15 LGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQQ 90 (559)
T ss_dssp SSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999 99999999999999999999997 99999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHh-cCcccCC--HHHHHHHHHHhcCC----
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVTG--RDDIKAVASISAGN---- 200 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~~~l~~va~ts~~~---- 200 (588)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++. ++.|.++|+||+++
T Consensus 91 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~ 170 (559)
T 3p9d_A 91 DREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIG 170 (559)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGG
T ss_pred HHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999999999 9999984 78899999999986
Q ss_pred --chhHHHHHHHHHHHhcc-----CCc-----EEE--ecCCCcccceeeeeceEEeeccCCccccccccccccccc--ce
Q 007834 201 --DEFIGNLIADAIIKIGA-----DGV-----ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD--NA 264 (588)
Q Consensus 201 --~~~l~~li~dA~~~v~~-----~g~-----I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~--n~ 264 (588)
+++|++|++||+.++++ ++. |++ ..|++++|| ++++||+|+++|.||| |+++++ ||
T Consensus 171 ~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n~ 242 (559)
T 3p9d_A 171 ADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGNV 242 (559)
T ss_dssp TTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSSB
T ss_pred chhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCCc
Confidence 69999999999999984 244 333 359999998 9999999999999998 677888 99
Q ss_pred eEEEecccc-------------ccHHh-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEE
Q 007834 265 KVLITDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVA 320 (588)
Q Consensus 265 ~Ill~d~~i-------------~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~ 320 (588)
||++++++| +++++ +.++++++.++|+|||||+++|+++|+++|..|++ +
T Consensus 243 kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I------~ 316 (559)
T 3p9d_A 243 KIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKI------M 316 (559)
T ss_dssp CEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTC------E
T ss_pred eEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCC------c
Confidence 999999986 34444 56789999999999999999999999999999874 6
Q ss_pred EeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcc-cCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHH
Q 007834 321 VVKCPGFGDGKKALLQDIALMTGADFLSGELGLTL-AGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIK 396 (588)
Q Consensus 321 aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l-~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~ 396 (588)
||+ ++++.+|+|||++|||+++++..++.+ +++++++||+|+.|+ +++++|++|+||+++
T Consensus 317 av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~----------- 380 (559)
T 3p9d_A 317 GVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKH----------- 380 (559)
T ss_dssp EES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSS-----------
T ss_pred eEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCC-----------
Confidence 764 677999999999999999997666654 899999999999998 589999999998753
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhh
Q 007834 397 KDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPII 475 (588)
Q Consensus 397 ~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~ 475 (588)
++|||+|||+|+.+++|+||++|||||++|+++++| +||||||+|++|+.+|+++
T Consensus 381 ------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 436 (559)
T 3p9d_A 381 ------------------------SSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNF 436 (559)
T ss_dssp ------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHH
T ss_pred ------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999 9999999999999999999
Q ss_pred hcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CC------------ceeEEccCCcccccccC
Q 007834 476 KNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DW------------RFGYNAMTGRYEDLLSA 539 (588)
Q Consensus 476 ~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~------------~~Gid~~~g~i~d~~~~ 539 (588)
+.+..+.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++ ++|||+.+|++.||++.
T Consensus 437 ~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~ 515 (559)
T 3p9d_A 437 ATTVGSRE-QLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHA 515 (559)
T ss_dssp HTTSCTTH-HHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTS
T ss_pred hcccChHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhc
Confidence 88777765 699999999999999999999999999999999873 33 79999999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 540 GVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 540 gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
|||||+.||+++|++|+++|++|||||++|... |+++.
T Consensus 516 gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~-~~~~~ 553 (559)
T 3p9d_A 516 GVLEPTISKVKSLKSALEACVAILRIDTMITVD-PEPPK 553 (559)
T ss_dssp SCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECC-CCCCC
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcC-Ccccc
Confidence 999999999999999999999999999999998 87653
No 11
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=6.3e-102 Score=863.80 Aligned_cols=483 Identities=20% Similarity=0.294 Sum_probs=430.8
Q ss_pred ceeecccccchhHHhhcccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhccccc
Q 007834 32 KCLWRNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSD 110 (588)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~h 110 (588)
-.+|+++++|+++++++..+++.||.+||.+|+.||+.||++|||||||+||+|||++ .|+++|||||+||||+|+++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h 98 (562)
T 3p9d_E 19 IVAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDN 98 (562)
T ss_dssp -----------CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCS
T ss_pred hHHHHhcCCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCC
Confidence 3489999999999999888999999999999999999999999999999999999999 999999999999999999999
Q ss_pred chhhHHhHHHHHHHHhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCCH---
Q 007834 111 TIENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGR--- 187 (588)
Q Consensus 111 p~~~~~akLl~~~a~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~--- 187 (588)
|. |||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++.
T Consensus 99 P~----Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~ 174 (562)
T 3p9d_E 99 EI----AKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDE 174 (562)
T ss_dssp HH----HHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCS
T ss_pred HH----HHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcch
Confidence 96 99999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred ---HHHHHHHHHhcCC------chhHHHHHHHHHHHhccC-------CcEEE--ecCCCcccceeeeeceEEeeccCCcc
Q 007834 188 ---DDIKAVASISAGN------DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQ 249 (588)
Q Consensus 188 ---~~l~~va~ts~~~------~~~l~~li~dA~~~v~~~-------g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~ 249 (588)
+.|.++|+||+++ .+.|+++++||+..+.+. +.|++ ..|++++|| ++++||+|+++|.|||
T Consensus 175 ~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~ 253 (562)
T 3p9d_E 175 LFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQ 253 (562)
T ss_dssp SCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTS
T ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCC
Confidence 7899999999886 378999999999988652 34554 579999999 9999999999999999
Q ss_pred cccccccccccccceeEEEecccc-------------ccHHh-----------HHHHHHHHhcCCCCEEEEecCCchHHH
Q 007834 250 FITNQEKSLVEFDNAKVLITDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVL 305 (588)
Q Consensus 250 ~~~~~~~~~~~~~n~~Ill~d~~i-------------~~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al 305 (588)
|.++.+ .+..++|++|+++++++ +++++ +.++++++.++|+|||||+++|+++|+
T Consensus 254 m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al 332 (562)
T 3p9d_E 254 MPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEAN 332 (562)
T ss_dssp CCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHH
T ss_pred cCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHH
Confidence 755421 12234899999999874 34444 567899999999999999999999999
Q ss_pred HHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE-----ecceEEEEe
Q 007834 306 ETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV-----KSNSTTIVA 380 (588)
Q Consensus 306 ~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~-----~~~~~~~i~ 380 (588)
++|..|++ .+|+++ ++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|+
T Consensus 333 ~~L~~~~I------~~v~~v-----~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~ 396 (562)
T 3p9d_E 333 HLLLQNDL------PAVRWV-----GGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIE 396 (562)
T ss_dssp HHHHTTTC------CCEECC-----CTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEEC
T ss_pred HHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEe
Confidence 99998875 566655 488999999999999999 899999999999999997 368999999
Q ss_pred CCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-ccc
Q 007834 381 DPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVP 459 (588)
Q Consensus 381 g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvp 459 (588)
||+++ ..|||+|||+|+.+++|+||++|||||++|+++++| +||
T Consensus 397 g~~~~-----------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVp 441 (562)
T 3p9d_E 397 QSKET-----------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVY 441 (562)
T ss_dssp CCSCC-----------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEE
T ss_pred cCCCC-----------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 99764 478999999999999999999999999999999999 999
Q ss_pred CCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc-----CCCceeEEccCCccc
Q 007834 460 GGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYE 534 (588)
Q Consensus 460 GGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~-----~~~~~Gid~~~g~i~ 534 (588)
||||+|++|+.+|++++.++.+.+ ++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.
T Consensus 442 GGGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~ 520 (562)
T 3p9d_E 442 GGGAAEVTMSLAVSEEADKQRGID-QYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSN 520 (562)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCTTH-HHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCC
T ss_pred CCcHHHHHHHHHHHHHhccCccHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCccc
Confidence 999999999999999988777765 69999999999999999999999999999999986 357899999999999
Q ss_pred ccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCC
Q 007834 535 DLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADK 572 (588)
Q Consensus 535 d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~ 572 (588)
||++.|||||+.||+++|++|+++|++|||||++|...
T Consensus 521 dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 558 (562)
T 3p9d_E 521 DMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISG 558 (562)
T ss_dssp BTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECC
T ss_pred chHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999876
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.6e-101 Score=855.18 Aligned_cols=462 Identities=24% Similarity=0.382 Sum_probs=431.6
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
.+++.||.++|..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++||
T Consensus 15 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 90 (548)
T 1q3q_A 15 GTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKTQD 90 (548)
T ss_dssp TCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHHH
T ss_pred CcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHhcC
Confidence 4778999999999999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------ 200 (588)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +.+.|.++|+||+++
T Consensus 91 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~ 170 (548)
T 1q3q_A 91 KEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESH 170 (548)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGG
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999999999999999999999999999987 489999999998754
Q ss_pred chhHHHHHHHHHHHhccC--C-------cEEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEe
Q 007834 201 DEFIGNLIADAIIKIGAD--G-------VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~--g-------~I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~ 269 (588)
+++|++|++||+.+++++ | .|+++ +|++++|| ++++|++|+++|.||| |+++++||||+++
T Consensus 171 ~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~ 242 (548)
T 1q3q_A 171 KELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPR-------MPKRVENAKIALI 242 (548)
T ss_dssp HHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTT-------SCSEESSEEEEEE
T ss_pred hHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCC-------CcceecCCEEEEE
Confidence 589999999999999875 4 68776 99999999 9999999999999998 4678999999999
Q ss_pred ccc-------------cccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCC
Q 007834 270 DQK-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (588)
Q Consensus 270 d~~-------------i~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~ 325 (588)
|++ |++++++ .++++++.++|+||||++++|+++|+++|..|+ |+||+
T Consensus 243 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-- 314 (548)
T 1q3q_A 243 NEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR-- 314 (548)
T ss_dssp CSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC--
T ss_pred ecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc--
Confidence 999 6777775 678899999999999999999999999999876 47774
Q ss_pred CCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007834 326 GFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAAT 402 (588)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~ 402 (588)
++++++|+|||++|||++++ +++++++++||+|+.|++. +++|++|+||+++
T Consensus 315 ---~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~----------------- 369 (548)
T 1q3q_A 315 ---RVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP----------------- 369 (548)
T ss_dssp ---SCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC-----------------
T ss_pred ---cCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----------------
Confidence 67799999999999999999 8999999999999999874 8999999999763
Q ss_pred hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCC
Q 007834 403 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMED 481 (588)
Q Consensus 403 ~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~ 481 (588)
+.|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++
T Consensus 370 ------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g 431 (548)
T 1q3q_A 370 ------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGG 431 (548)
T ss_dssp ------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCH
T ss_pred ------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCC
Confidence 589999999999999999999999999999999999 9999999999999999999865555
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHH
Q 007834 482 PDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVS 557 (588)
Q Consensus 482 ~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e 557 (588)
. +++++++|++||+.||++||+|||+|+.+++++|++. +.++|||+.+|++.||++.|||||+.||+++|++|++
T Consensus 432 ~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e 510 (548)
T 1q3q_A 432 K-EALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASE 510 (548)
T ss_dssp H-HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred c-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHH
Confidence 4 5799999999999999999999999999999999863 4689999999999999999999999999999999999
Q ss_pred HHHHHHchhHHhhCCCCCC
Q 007834 558 IAAVVLTTEAVLADKIKQP 576 (588)
Q Consensus 558 ~a~~lL~iD~iI~~~~p~~ 576 (588)
+|++|||||++|..+ |++
T Consensus 511 ~a~~iL~iD~iI~~~-~~~ 528 (548)
T 1q3q_A 511 AAIMILRIDDVIAAK-ATK 528 (548)
T ss_dssp HHHHHHTCCEEEECC-C--
T ss_pred HHHHHHHHHHHHhcC-CcC
Confidence 999999999999997 765
No 13
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-100 Score=848.32 Aligned_cols=463 Identities=24% Similarity=0.303 Sum_probs=424.9
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.++.+|.++|.+|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |+|++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 78 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQDK 78 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhhh
Confidence 367799999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHh-cCcccC--CHHHHHHHHHHhcC------C
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVT--GRDDIKAVASISAG------N 200 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~~~l~~va~ts~~------~ 200 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ ++++++ +++.|.++|+||++ +
T Consensus 79 e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 79 EVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999999999999999999 999987 78999999999986 3
Q ss_pred chhHHHHHHHHHHHhc---cCC-----c--EEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEE
Q 007834 201 DEFIGNLIADAIIKIG---ADG-----V--ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~---~~g-----~--I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill 268 (588)
+++|++|++||+.+++ ++| . |++ ..|+++.|| ++++||+|+++|.||+ |+++++||||++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll 230 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIAC 230 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEEE
Confidence 6899999999999997 333 2 555 589999998 9999999999999997 677899999999
Q ss_pred eccccc-------------cHHh-----------HHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeC
Q 007834 269 TDQKIS-------------TVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKC 324 (588)
Q Consensus 269 ~d~~i~-------------~~~~-----------l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~ 324 (588)
++++++ ++++ +.++++++.++|+||||++++|+++|+++|..|+ |+||+
T Consensus 231 l~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~- 303 (529)
T 3iyg_A 231 LDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR- 303 (529)
T ss_pred ecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-
Confidence 999753 3333 4567889999999999999999999999999985 47776
Q ss_pred CCCCCChhHHHHHHHHHhCCeEeeccCCCc-ccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHh
Q 007834 325 PGFGDGKKALLQDIALMTGADFLSGELGLT-LAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLA 400 (588)
Q Consensus 325 ~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~-l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~ 400 (588)
++++.+|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++|++|+||+++
T Consensus 304 ----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 364 (529)
T 3iyg_A 304 ----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR--------------- 364 (529)
T ss_pred ----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC---------------
Confidence 56699999999999999999544443 2456688999999998 689999999999764
Q ss_pred hhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCC
Q 007834 401 ATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSM 479 (588)
Q Consensus 401 ~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 479 (588)
+.|||+|||+|+.+++|.||++|||||++|+++++| +||||||+|++|+.+|++++.++
T Consensus 365 --------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~ 424 (529)
T 3iyg_A 365 --------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSM 424 (529)
T ss_pred --------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhc
Confidence 479999999999999999999999999999999999 99999999999999999999887
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----C--------CceeEEccCCcccccccCccccchHH
Q 007834 480 EDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----D--------WRFGYNAMTGRYEDLLSAGVADPCRV 547 (588)
Q Consensus 480 ~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~--------~~~Gid~~~g~i~d~~~~gI~Dp~~v 547 (588)
++.+ ++++++|++||+.||++||+|||+|+.+++.+|++. + .++|||+.+|++.||++.|||||+.|
T Consensus 425 ~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~v 503 (529)
T 3iyg_A 425 GSRE-QLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIV 503 (529)
T ss_pred CChH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHH
Confidence 7765 599999999999999999999999999999999874 2 57999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHchhHHhhCC
Q 007834 548 ARCALQNAVSIAAVVLTTEAVLADK 572 (588)
Q Consensus 548 k~~~l~~A~e~a~~lL~iD~iI~~~ 572 (588)
|+++|++|+|+|++|||||+||...
T Consensus 504 k~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 504 KVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 9999999999999999999999875
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.6e-101 Score=856.60 Aligned_cols=460 Identities=25% Similarity=0.369 Sum_probs=425.7
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.++.||.++|.+|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++||+
T Consensus 15 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 90 (545)
T 1a6d_A 15 TQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKAQDT 90 (545)
T ss_dssp --CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGCTTT
T ss_pred chhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHhcCC
Confidence 568899999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC-CHHHHHHHHHHhcC------Cch
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-GRDDIKAVASISAG------NDE 202 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~~~l~~va~ts~~------~~~ 202 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++| + +++.|.++|+||++ +++
T Consensus 91 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~ 169 (545)
T 1a6d_A 91 AVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSND 169 (545)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHH
Confidence 999999999999999999999999999999999999999999999999999999 8 88999999999865 368
Q ss_pred hHHHHHHHHHHHhccC---------CcEEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecc
Q 007834 203 FIGNLIADAIIKIGAD---------GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (588)
Q Consensus 203 ~l~~li~dA~~~v~~~---------g~I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~ 271 (588)
+|++|++||+.+++++ +.|+++ +|++++|| ++++|++|+++|.||| |+++++||||+++|+
T Consensus 170 ~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~ 241 (545)
T 1a6d_A 170 FLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSK-------MPDVVKNAKIALIDS 241 (545)
T ss_dssp HHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTT-------SCSEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCC-------CcceecCCEEEEEec
Confidence 9999999999999875 368886 99999999 9999999999999998 467899999999999
Q ss_pred c-------------cccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCC
Q 007834 272 K-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (588)
Q Consensus 272 ~-------------i~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~ 327 (588)
+ |++++++ .++++++.++|+||||++++|+++|+++|..|+ |+||+
T Consensus 242 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~---- 311 (545)
T 1a6d_A 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR---- 311 (545)
T ss_dssp CBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC----
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec----
Confidence 8 6666665 678999999999999999999999999999986 47774
Q ss_pred CCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhhhh
Q 007834 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDN 404 (588)
Q Consensus 328 ~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~ 404 (588)
++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|++|+||+++
T Consensus 312 -~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------- 366 (545)
T 1a6d_A 312 -RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP------------------- 366 (545)
T ss_dssp -SCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS-------------------
T ss_pred -cCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC-------------------
Confidence 67799999999999999999 8999999999999999874 7899999998753
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChh
Q 007834 405 AYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPD 483 (588)
Q Consensus 405 ~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~e 483 (588)
+.|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++.
T Consensus 367 ----------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~- 429 (545)
T 1a6d_A 367 ----------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGR- 429 (545)
T ss_dssp ----------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHH-
T ss_pred ----------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCcc-
Confidence 589999999999999999999999999999999999 99999999999999999998766665
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHH
Q 007834 484 EQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 559 (588)
Q Consensus 484 q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 559 (588)
+++++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|
T Consensus 430 ~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a 509 (545)
T 1a6d_A 430 EQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVA 509 (545)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHH
Confidence 5699999999999999999999999999999999863 468999999999999999999999999999999999999
Q ss_pred HHHHchhHHhhCCCCCC
Q 007834 560 AVVLTTEAVLADKIKQP 576 (588)
Q Consensus 560 ~~lL~iD~iI~~~~p~~ 576 (588)
++|||||++|..+ |+.
T Consensus 510 ~~iL~id~iI~~~-~~~ 525 (545)
T 1a6d_A 510 TMILRIDDVIASK-KST 525 (545)
T ss_dssp HHHHTCCEEC-------
T ss_pred HHHHHHHHHHhcc-cCC
Confidence 9999999999997 765
No 15
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-100 Score=842.75 Aligned_cols=461 Identities=20% Similarity=0.280 Sum_probs=424.7
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.++..|.+++..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++||+
T Consensus 4 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 79 (515)
T 3iyg_H 4 TDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDA 79 (515)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhc
Confidence 456678999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--C----HHHHHHHHHHhcC----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--G----RDDIKAVASISAG---- 199 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~~~l~~va~ts~~---- 199 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + ++.|.++|+||++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~ 159 (515)
T 3iyg_H 80 EVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLI 159 (515)
T ss_pred eeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999985 5 5678999999875
Q ss_pred --CchhHHHHHHHHHHHhccC---CcEEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 200 --NDEFIGNLIADAIIKIGAD---GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 200 --~~~~l~~li~dA~~~v~~~---g~I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
++++|++|++||+.+++.+ +.|+++ .|+++.|+ ++++||+|+++|.||||.+ ||++++||||+++|++
T Consensus 160 s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~~~en~kIll~~~~ 234 (515)
T 3iyg_H 160 SQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPKKYHNPMIALLNVE 234 (515)
T ss_pred cccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc----CCccccccEEEEEccc
Confidence 4689999999999999876 777774 68899998 9999999999999999865 4568999999999995
Q ss_pred -------------cccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCC
Q 007834 273 -------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (588)
Q Consensus 273 -------------i~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~ 328 (588)
|++++++ .++++++.++|+||||++++|++.++++|.++ |+ +++ +
T Consensus 235 Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---gI---~~v-----~ 303 (515)
T 3iyg_H 235 LELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---DM---FCA-----G 303 (515)
T ss_pred ccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---CC---ccc-----c
Confidence 5666665 56688999999999999999999999888643 33 444 5
Q ss_pred CChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhH
Q 007834 329 DGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 405 (588)
Q Consensus 329 ~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~ 405 (588)
++++.+|+|||++|||++++ +++++++++||+|+.|++ ++++|++|+||+++
T Consensus 304 ~~~k~~leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------------------- 358 (515)
T 3iyg_H 304 RVPEEDLKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA-------------------- 358 (515)
T ss_pred cccHHHHHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC--------------------
Confidence 77899999999999999999 799999999999999986 47899999999764
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhh
Q 007834 406 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 484 (588)
Q Consensus 406 ~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq 484 (588)
..|||++||+|+.+++|+||++|||||++|++++++ +|||||++|++|+.+|++++.+.++.+
T Consensus 359 ---------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e- 422 (515)
T 3iyg_H 359 ---------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQ- 422 (515)
T ss_pred ---------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHH-
Confidence 479999999999999999999999999999999995 999999999999999999988777765
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHH
Q 007834 485 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAA 560 (588)
Q Consensus 485 ~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~ 560 (588)
++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|+
T Consensus 423 q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~ 502 (515)
T 3iyg_H 423 QLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAAC 502 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999884 4579999999999999999999999999999999999999
Q ss_pred HHHchhHHhhCC
Q 007834 561 VVLTTEAVLADK 572 (588)
Q Consensus 561 ~lL~iD~iI~~~ 572 (588)
+|||||++|+..
T Consensus 503 ~iL~iD~ii~~~ 514 (515)
T 3iyg_H 503 LIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHhcCC
Confidence 999999999764
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9e-100 Score=840.20 Aligned_cols=458 Identities=19% Similarity=0.312 Sum_probs=422.9
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (588)
.+++.||.+||..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |+|++++|++||
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~qd 77 (515)
T 3iyg_E 2 RKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQD 77 (515)
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 4568899999999999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCC----HHHHHHHHHHhcCC----
Q 007834 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG----RDDIKAVASISAGN---- 200 (588)
Q Consensus 129 ~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~~~l~~va~ts~~~---- 200 (588)
+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. ++.|.++|+||+++
T Consensus 78 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~ 157 (515)
T 3iyg_E 78 DEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVN 157 (515)
T ss_pred hhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchh
Confidence 9999999999999999999999999999999999999999999999999999998853 68999999999986
Q ss_pred --chhHHHHHHHHHHHhccC-------CcEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEe
Q 007834 201 --DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (588)
Q Consensus 201 --~~~l~~li~dA~~~v~~~-------g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~ 269 (588)
.+.|+++++||+..+.+. +.|++ ..|++++|+ ++++||+|+++|.||| |++.++||+|+++
T Consensus 158 ~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~-------m~~~~~~~kIall 229 (515)
T 3iyg_E 158 SCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQ-------MPKQVEDAKIAIL 229 (515)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEeccccccc-------ccccCCCceEEEE
Confidence 378999999999998652 34555 479999998 9999999999999998 5567889999999
Q ss_pred cccc-------------ccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCC
Q 007834 270 DQKI-------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (588)
Q Consensus 270 d~~i-------------~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~ 325 (588)
++++ ++++++ .++++++.++|+||||++++|+++|+++|..|++ .+|+++
T Consensus 230 ~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~~v 303 (515)
T 3iyg_E 230 TCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVRWV 303 (515)
T ss_pred cCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEecc
Confidence 8873 455555 5688999999999999999999999999999874 677655
Q ss_pred CCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE-----ecceEEEEeCCCChHHHHHHHHHHHHHHh
Q 007834 326 GFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV-----KSNSTTIVADPYTKAEIQARIMQIKKDLA 400 (588)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~-----~~~~~~~i~g~~~~~~i~~ri~~l~~~l~ 400 (588)
+ +.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|+||+++
T Consensus 304 ~-----k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~--------------- 358 (515)
T 3iyg_E 304 G-----GPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS--------------- 358 (515)
T ss_pred C-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC---------------
Confidence 4 89999999999999999 899999999999999987 45899999999865
Q ss_pred hhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCC
Q 007834 401 ATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSM 479 (588)
Q Consensus 401 ~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~ 479 (588)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++
T Consensus 359 --------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~ 418 (515)
T 3iyg_E 359 --------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKC 418 (515)
T ss_pred --------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccC
Confidence 369999999999999999999999999999999999 99999999999999999998877
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc-----CCCceeEEccCCcccccccCccccchHHHHHHHHH
Q 007834 480 EDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQN 554 (588)
Q Consensus 480 ~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~-----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~ 554 (588)
++.+ ++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.||++.|||||+.||+++|++
T Consensus 419 ~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 497 (515)
T 3iyg_E 419 PTLE-QYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISL 497 (515)
T ss_pred CcHH-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHH
Confidence 7765 69999999999999999999999999999999986 25689999999999999999999999999999999
Q ss_pred HHHHHHHHHchhHHhhC
Q 007834 555 AVSIAAVVLTTEAVLAD 571 (588)
Q Consensus 555 A~e~a~~lL~iD~iI~~ 571 (588)
|+++|++|||||++|+.
T Consensus 498 A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 498 ATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHHhHHHhhcC
Confidence 99999999999999964
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.8e-101 Score=854.95 Aligned_cols=464 Identities=20% Similarity=0.288 Sum_probs=428.3
Q ss_pred ccchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
..+++.||.++|..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++|
T Consensus 10 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~q 85 (528)
T 3p9d_D 10 TFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAAQ 85 (528)
T ss_dssp SSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHHH
T ss_pred ccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 35788999999999999999999999999999999999999 99999999999999999999997 99999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC-----
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN----- 200 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~----- 200 (588)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 165 (528)
T 3p9d_D 86 DSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQ 165 (528)
T ss_dssp HHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCST
T ss_pred hhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccch
Confidence 9999999999999999999999999999999999999999999999999999999998 789999999999986
Q ss_pred -chhHHHHHHHHHHHhcc--CCcEEE-------ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 201 -DEFIGNLIADAIIKIGA--DGVILI-------ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 201 -~~~l~~li~dA~~~v~~--~g~I~v-------~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
+++|++|++||+.++++ +|.|.+ ..|++++|| ++++||+|+++|.|||| |+++++||||++++
T Consensus 166 ~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~ 238 (528)
T 3p9d_D 166 YSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQ 238 (528)
T ss_dssp THHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEEC
T ss_pred hHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEEe
Confidence 58999999999999987 454433 349999998 99999999999999986 88999999999999
Q ss_pred cccc-------------cHHh-----------HHHHHHHHhcCCCCEEEEecCC-----chHHHHHHHHHhhhccceEEE
Q 007834 271 QKIS-------------TVKE-----------IVPLLEKTTQLSVPLLIIAEDI-----SSQVLETLVMNKIRGLLNVAV 321 (588)
Q Consensus 271 ~~i~-------------~~~~-----------l~~~le~i~~~~~~lvI~~~~i-----~~~al~~L~~n~l~g~~~i~a 321 (588)
++++ ++++ +.++++++.++|+||||++++| +++++++|..|+ |+|
T Consensus 239 ~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~a 312 (528)
T 3p9d_D 239 FQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMV 312 (528)
T ss_dssp CCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCE
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEE
Confidence 9875 3433 5688999999999999999999 999999998765 478
Q ss_pred eeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHH
Q 007834 322 VKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKD 398 (588)
Q Consensus 322 Vk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~ 398 (588)
|| ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|.+..
T Consensus 313 v~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~------------ 370 (528)
T 3p9d_D 313 VK-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN------------ 370 (528)
T ss_dssp EE-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG------------
T ss_pred EE-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC------------
Confidence 87 45589999999999999999 789999999999999984 567889999876210
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhc
Q 007834 399 LAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKN 477 (588)
Q Consensus 399 l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~ 477 (588)
.+++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.
T Consensus 371 --------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 430 (528)
T 3p9d_D 371 --------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEAR 430 (528)
T ss_dssp --------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCT
T ss_pred --------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhh
Confidence 14689999999999999999999999999999999999 999999999999999999987
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHH
Q 007834 478 SMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQ 553 (588)
Q Consensus 478 ~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~ 553 (588)
+..+. +++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|+
T Consensus 431 ~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~ 509 (528)
T 3p9d_D 431 SMEGV-QAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAIT 509 (528)
T ss_dssp TSCHH-HHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHH
T ss_pred ccChH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHH
Confidence 76665 5699999999999999999999999999999999884 478999999999999999999999999999999
Q ss_pred HHHHHHHHHHchhHHhhCC
Q 007834 554 NAVSIAAVVLTTEAVLADK 572 (588)
Q Consensus 554 ~A~e~a~~lL~iD~iI~~~ 572 (588)
+|+++|++|||||+||+.+
T Consensus 510 ~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 510 LASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHHHHHHHHHHCSCCCBCC
T ss_pred HHHHHHHHHHhhhHheecC
Confidence 9999999999999998753
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.9e-100 Score=841.14 Aligned_cols=458 Identities=21% Similarity=0.301 Sum_probs=423.9
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
++..+|.++|..|+.||+.||++|||||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++||+
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 79 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDI 79 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhh
Confidence 456689999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCCc------
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND------ 201 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~~------ 201 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 80 EAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred hhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999999998 7899999999999985
Q ss_pred hhHHHHHHHHHHHhcc---CCc-----EEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecc
Q 007834 202 EFIGNLIADAIIKIGA---DGV-----ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (588)
Q Consensus 202 ~~l~~li~dA~~~v~~---~g~-----I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~ 271 (588)
++|++|++||+.++++ +|. |+++ .|+++.|+ ++++||+|+++|.| + ||..++||||+++++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~ 230 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQF 230 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEe
Confidence 8999999999999985 454 6664 78999998 99999999999998 3 667789999999998
Q ss_pred ccc-------------cHH-----------hHHHHHHHHhcCCCCEEEE-----ecCCchHHHHHHHHHhhhccceEEEe
Q 007834 272 KIS-------------TVK-----------EIVPLLEKTTQLSVPLLII-----AEDISSQVLETLVMNKIRGLLNVAVV 322 (588)
Q Consensus 272 ~i~-------------~~~-----------~l~~~le~i~~~~~~lvI~-----~~~i~~~al~~L~~n~l~g~~~i~aV 322 (588)
+++ +++ .+.++++++.++|+||||| +++|+++|+++|..|+ |+||
T Consensus 231 ~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~------I~av 304 (518)
T 3iyg_D 231 CLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK------IMVV 304 (518)
T ss_pred eccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcC------cEEE
Confidence 753 343 3567889999999999999 8999999999999875 5899
Q ss_pred eCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ec-ceEEEEeCCCChHHHHHHHHHHHHH
Q 007834 323 KCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KS-NSTTIVADPYTKAEIQARIMQIKKD 398 (588)
Q Consensus 323 k~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~-~~~~~i~g~~~~~~i~~ri~~l~~~ 398 (588)
|+|+ +.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|++|++
T Consensus 305 ~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~-------------- 360 (518)
T 3iyg_D 305 KDIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS-------------- 360 (518)
T ss_pred ecCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC--------------
Confidence 9888 57899999999999999 799999999999999986 34 68899999864
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhc
Q 007834 399 LAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKN 477 (588)
Q Consensus 399 l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~ 477 (588)
++++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.
T Consensus 361 --------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~ 420 (518)
T 3iyg_D 361 --------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSR 420 (518)
T ss_pred --------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhh
Confidence 14689999999999999999999999999999999999 999999999999999999988
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCCcccccccCccccchHHHHHHHH
Q 007834 478 SMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQ 553 (588)
Q Consensus 478 ~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~ 553 (588)
+.++.+ ++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.||++.|||||+.||+++|+
T Consensus 421 ~~~g~~-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 499 (518)
T 3iyg_D 421 TLSGME-SYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALT 499 (518)
T ss_pred cCChHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHH
Confidence 777765 69999999999999999999999999999999988 3568999999999999999999999999999999
Q ss_pred HHHHHHHHHHchhHHhhCC
Q 007834 554 NAVSIAAVVLTTEAVLADK 572 (588)
Q Consensus 554 ~A~e~a~~lL~iD~iI~~~ 572 (588)
+|+++|++|||||+||+.+
T Consensus 500 ~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 500 LATETVRSILKIDDVVNTR 518 (518)
T ss_pred HHHHHHHHHHhhcceEecC
Confidence 9999999999999999753
No 19
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.8e-101 Score=854.09 Aligned_cols=467 Identities=20% Similarity=0.285 Sum_probs=425.0
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.+..+|.+++..|+.||+.||++|||||||+||+|||++ .|+++|||||+||||+|+++||. |+|++++|++||+
T Consensus 17 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~ 92 (550)
T 3p9d_G 17 TDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQDA 92 (550)
T ss_dssp CCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhh
Confidence 467789999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccCC-----HHHHHHHHHHhcC-----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAG----- 199 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~----- 199 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. ++.|.++|+||++
T Consensus 93 e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~ 172 (550)
T 3p9d_G 93 EVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIH 172 (550)
T ss_dssp TTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTG
T ss_pred hhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999999863 6789999999875
Q ss_pred -CchhHHHHHHHHHHHhcc-C------CcEEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEecc
Q 007834 200 -NDEFIGNLIADAIIKIGA-D------GVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (588)
Q Consensus 200 -~~~~l~~li~dA~~~v~~-~------g~I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~ 271 (588)
++++|++|++||+.++++ + +++++ +|++++|| ++++||+|+++|+||||.+ |+++++||||+++|+
T Consensus 173 ~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~~~ 246 (550)
T 3p9d_G 173 NNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSLNV 246 (550)
T ss_dssp GGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEECS
T ss_pred ccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEecc
Confidence 368999999999999984 3 44444 59999999 9999999999999999965 667799999999999
Q ss_pred c-------------cccHHhHH-----------HHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCC
Q 007834 272 K-------------ISTVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (588)
Q Consensus 272 ~-------------i~~~~~l~-----------~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~ 327 (588)
+ |++++++. ++++++.++|++|||++++|++.++++|.++. |+++
T Consensus 247 ~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g------I~~v----- 315 (550)
T 3p9d_G 247 ELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN------IFCA----- 315 (550)
T ss_dssp CCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT------CEEE-----
T ss_pred ccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC------Cccc-----
Confidence 8 45555554 36788999999999999999999999886433 3555
Q ss_pred CCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhh
Q 007834 328 GDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDN 404 (588)
Q Consensus 328 ~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~ 404 (588)
+++++.+|++||++|||++++ +++++++++||+|+.|++ +++++++|+||+++
T Consensus 316 ~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~------------------- 371 (550)
T 3p9d_G 316 GRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA------------------- 371 (550)
T ss_dssp ECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-------------------
T ss_pred cCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-------------------
Confidence 567789999999999999999 899999999999999986 68899999998754
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChh
Q 007834 405 AYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPD 483 (588)
Q Consensus 405 ~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~e 483 (588)
+.|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++.+
T Consensus 372 ----------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 435 (550)
T 3p9d_G 372 ----------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQ 435 (550)
T ss_dssp ----------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTT
T ss_pred ----------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHH
Confidence 579999999999999999999999999999999999 999999999999999999987777765
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHH
Q 007834 484 EQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 559 (588)
Q Consensus 484 q~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 559 (588)
++++++|++||+.||++||+|||+|+.+++++|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|
T Consensus 436 -q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a 514 (550)
T 3p9d_G 436 -QMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEAT 514 (550)
T ss_dssp -HHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999873 568999999999999999999999999999999999999
Q ss_pred HHHHchhHHhhCCCCCCCCCC
Q 007834 560 AVVLTTEAVLADKIKQPKPAV 580 (588)
Q Consensus 560 ~~lL~iD~iI~~~~p~~~~~~ 580 (588)
++|||||++|..+ |+++.+.
T Consensus 515 ~~iL~id~ii~~~-~~~~~~~ 534 (550)
T 3p9d_G 515 NLILSVDETITNK-GSESANA 534 (550)
T ss_dssp HHHHTEEEEECCC-CCC----
T ss_pred HHHHhHHHHhhCC-CcccccC
Confidence 9999999999998 8765543
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=6.4e-101 Score=851.53 Aligned_cols=466 Identities=20% Similarity=0.303 Sum_probs=424.9
Q ss_pred cchhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec--CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007834 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE--SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (588)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~--~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~q 127 (588)
.+++.||.++|.+|+.||+.||++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++|
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~~q 84 (527)
T 3p9d_B 9 QVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISKVQ 84 (527)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHHHh
Confidence 5788999999999999999999999999999999999998 79999999999999999999995 99999999999
Q ss_pred hhhcCCCcchhHHHHHHHHHHHHhhhhC-CCCcHHHHHHHHHHHHHHHHHHHhcCcccCC-----HHHHHHHHHHhcCC-
Q 007834 128 NDLAGDGTTTAVILAREMIKSGMLSVSF-GANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAGN- 200 (588)
Q Consensus 128 d~~~GDGTTsvvvLa~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~~- 200 (588)
|+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++++ ++.|.++|+||+++
T Consensus 85 d~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK 164 (527)
T 3p9d_B 85 DDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSK 164 (527)
T ss_dssp HHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred HhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccC
Confidence 9999999999999999999999999999 9999999999999999999999999999985 78999999999987
Q ss_pred -----chhHHHHHHHHHHHhccCC---cEEEe--cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 201 -----DEFIGNLIADAIIKIGADG---VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 201 -----~~~l~~li~dA~~~v~~~g---~I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
+++|++|++||+.++++++ +|+++ .|+++.|+ ++++||+||++|.||| |+.++||||++++
T Consensus 165 ~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIlll~ 235 (527)
T 3p9d_B 165 ILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILIAN 235 (527)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEEEC
T ss_pred cccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEEec
Confidence 6899999999999999887 67775 69999998 9999999999999996 3467899999998
Q ss_pred ccc--------------ccHHhH-----------HHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCC
Q 007834 271 QKI--------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (588)
Q Consensus 271 ~~i--------------~~~~~l-----------~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~ 325 (588)
+++ ++++++ .++++++.++|+||||++++|+++++++|..|+ |+||+++
T Consensus 236 ~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~ 309 (527)
T 3p9d_B 236 TTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHA 309 (527)
T ss_dssp SCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCC
T ss_pred cccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecC
Confidence 864 344444 467889999999999999999999999999875 4788766
Q ss_pred CCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007834 326 GFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAAT 402 (588)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~ 402 (588)
+ +.+|+|||++|||++++ +++++++++||+|+.|+ ++++++++|+||+++
T Consensus 310 ~-----~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~----------------- 362 (527)
T 3p9d_B 310 D-----FEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAG----------------- 362 (527)
T ss_dssp H-----HHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCS-----------------
T ss_pred C-----HHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCCC-----------------
Confidence 5 78899999999999999 79999999999999998 578999999998753
Q ss_pred hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCC
Q 007834 403 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMED 481 (588)
Q Consensus 403 ~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~ 481 (588)
++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++
T Consensus 363 ------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 424 (527)
T 3p9d_B 363 ------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDG 424 (527)
T ss_dssp ------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCS
T ss_pred ------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCc
Confidence 689999999999999999999999999999999999 9999999999999999999876666
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHH
Q 007834 482 PDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVS 557 (588)
Q Consensus 482 ~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e 557 (588)
. +++++++|++||+.||++||+|||+|+.+++++|++. ++++|||+.+|++.||++.|||||+.||+++|++|++
T Consensus 425 ~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e 503 (527)
T 3p9d_B 425 K-KSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASE 503 (527)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHH
Confidence 5 4699999999999999999999999999999999874 5689999999999999999999999999999999999
Q ss_pred HHHHHHchhHHhhCCCCCCCCCCC
Q 007834 558 IAAVVLTTEAVLADKIKQPKPAVP 581 (588)
Q Consensus 558 ~a~~lL~iD~iI~~~~p~~~~~~~ 581 (588)
+|++|||||++|..+ |+++.++|
T Consensus 504 ~a~~iL~id~ii~~~-~~~~~~~~ 526 (527)
T 3p9d_B 504 AAEVLLRVDNIIRAR-PRTANRQH 526 (527)
T ss_dssp HHHHHHHCCEEEEEC---------
T ss_pred HHHHHHhHHHHHhcC-CcccCCCC
Confidence 999999999999998 88766554
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-98 Score=830.42 Aligned_cols=457 Identities=22% Similarity=0.312 Sum_probs=420.7
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~ 130 (588)
++..|.++|..|+.||+.||++|||||||+||+|||++ .|+++|||||+|||++|+++||+ |||++++|++||++
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e 78 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEE 78 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhh
Confidence 45678999999999999999999999999999999999 99999999999999999999997 99999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcCC------ch
Q 007834 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------DE 202 (588)
Q Consensus 131 ~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------~~ 202 (588)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++.|++ +++.|.++|+||+++ .+
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~ 158 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSS 158 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999987 478999999999875 36
Q ss_pred hHHHHHHHHHHHhccC--C--------cEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 203 FIGNLIADAIIKIGAD--G--------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 203 ~l~~li~dA~~~v~~~--g--------~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
.++++++||+..+.++ + .|++ .+|++++|+ ++++||+|+++|.||+ |+++++||||+++|
T Consensus 159 ~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~ 230 (515)
T 3iyg_G 159 LACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLD 230 (515)
T ss_pred HHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEc
Confidence 6789999999988632 2 1444 489999998 9999999999999995 78899999999999
Q ss_pred cc-------------cccHHhHHHHHH-----------HHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCC
Q 007834 271 QK-------------ISTVKEIVPLLE-----------KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (588)
Q Consensus 271 ~~-------------i~~~~~l~~~le-----------~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~ 326 (588)
++ |++++++.++++ ++.+.|++|||++++|++.++++|.+++ |+||
T Consensus 231 ~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~------I~av---- 300 (515)
T 3iyg_G 231 SSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN------ITAI---- 300 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC------ceee----
Confidence 94 567777777665 8899999999999999999999998753 4665
Q ss_pred CCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCcccee-EEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007834 327 FGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAAT 402 (588)
Q Consensus 327 ~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~-~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~ 402 (588)
+++++.+|+|||++|||++++ +++++++++||+ |+.|++ ++++|++|+||+++
T Consensus 301 -~~~~k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~----------------- 357 (515)
T 3iyg_G 301 -RRVRKTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP----------------- 357 (515)
T ss_pred -ccCCHHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC-----------------
Confidence 677899999999999999999 799999999999 999986 46689999999865
Q ss_pred hhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCC
Q 007834 403 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMED 481 (588)
Q Consensus 403 ~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~ 481 (588)
..|||+|||+|+.+++|+||++|||||++|++++++ +|||||++|++|+.+|++++.++++
T Consensus 358 ------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g 419 (515)
T 3iyg_G 358 ------------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTG 419 (515)
T ss_pred ------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCc
Confidence 379999999999999999999999999999999876 9999999999999999999887777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC-----CCceeEEccCCcccccccCccccchHHHHHHHHHHH
Q 007834 482 PDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAV 556 (588)
Q Consensus 482 ~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~ 556 (588)
.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 420 ~e-q~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~ 498 (515)
T 3iyg_G 420 VE-QWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAV 498 (515)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHH
Confidence 65 689999999999999999999999999999999873 457999999999999999999999999999999999
Q ss_pred HHHHHHHchhHHhhCC
Q 007834 557 SIAAVVLTTEAVLADK 572 (588)
Q Consensus 557 e~a~~lL~iD~iI~~~ 572 (588)
++|++|||||++|...
T Consensus 499 e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 499 ETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHHHHHHheeecC
Confidence 9999999999999764
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.2e-98 Score=827.25 Aligned_cols=456 Identities=21% Similarity=0.297 Sum_probs=417.6
Q ss_pred hhhcC-HHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 52 KILFG-KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 52 ~~~~g-~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.+..| .+++..|+.||+.||++|||||||+||+|||++ .|+|+|||||+||||+|+++||+ |+|++++|++||+
T Consensus 4 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 79 (512)
T 3iyg_Q 4 KHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQEQ 79 (512)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhhh
Confidence 45678 799999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhc----CcccCCHHHHHHHHHHhcCC-----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQK----SFPVTGRDDIKAVASISAGN----- 200 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~----s~~v~~~~~l~~va~ts~~~----- 200 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ +.++++++.|.++|+||+++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~ 159 (512)
T 3iyg_Q 80 EVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGN 159 (512)
T ss_pred hhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccc
Confidence 999999999999999999999999999999999999999999999999998 56777899999999999987
Q ss_pred chhHHHHHHHHHHHhccC-CcEEE-------ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc
Q 007834 201 DEFIGNLIADAIIKIGAD-GVILI-------ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~-g~I~v-------~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~ 272 (588)
+++|++|++||+.+++++ +.|.+ ..|+++.|+ ++++||+||++|.| |++.++||+|++++++
T Consensus 160 ~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~~ 229 (512)
T 3iyg_Q 160 EVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSCP 229 (512)
T ss_pred hHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEecc
Confidence 789999999999999886 44433 369999888 99999999999876 4567889999999887
Q ss_pred c-------------ccHHhHHHH-------HH----HHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCC
Q 007834 273 I-------------STVKEIVPL-------LE----KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (588)
Q Consensus 273 i-------------~~~~~l~~~-------le----~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~ 328 (588)
+ ++++++.++ ++ ++.++|+||||++++|++.++++|.++ +|+|||+|+
T Consensus 230 le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~-- 301 (512)
T 3iyg_Q 230 FDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS-- 301 (512)
T ss_pred cccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC--
Confidence 4 556676655 44 889999999999999999999988653 479999888
Q ss_pred CChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhH
Q 007834 329 DGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 405 (588)
Q Consensus 329 ~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~ 405 (588)
+.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|..
T Consensus 302 ---~~dle~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~--------------------- 352 (512)
T 3iyg_Q 302 ---KWDLRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE--------------------- 352 (512)
T ss_pred ---HHHHHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC---------------------
Confidence 57799999999999999 899999999999999986 4668999998743
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhh
Q 007834 406 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 484 (588)
Q Consensus 406 ~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq 484 (588)
++++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++.+
T Consensus 353 -------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e- 418 (512)
T 3iyg_Q 353 -------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLE- 418 (512)
T ss_pred -------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHH-
Confidence 24689999999999999999999999999999999999 999999999999999999988777765
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc----CCCceeEEccCC--cccccccCccccchHHHHHHHHHHHHH
Q 007834 485 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTG--RYEDLLSAGVADPCRVARCALQNAVSI 558 (588)
Q Consensus 485 ~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~----~~~~~Gid~~~g--~i~d~~~~gI~Dp~~vk~~~l~~A~e~ 558 (588)
++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+| ++.||++.|||||+.||+++|++|+++
T Consensus 419 q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~ 498 (512)
T 3iyg_Q 419 QYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNA 498 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999987 367899999965 999999999999999999999999999
Q ss_pred HHHHHchhHHhhCC
Q 007834 559 AAVVLTTEAVLADK 572 (588)
Q Consensus 559 a~~lL~iD~iI~~~ 572 (588)
|++|||||+||+.+
T Consensus 499 a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 499 AVTVLRVDQIIMAK 512 (512)
T ss_pred HHHHHhHhHheecC
Confidence 99999999999753
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-97 Score=822.09 Aligned_cols=455 Identities=23% Similarity=0.336 Sum_probs=412.9
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007834 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (588)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~ 130 (588)
++..|.+|+..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |+|++++|++||++
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e 79 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDI 79 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHH
Confidence 46688999999999999999999999999999999999 99999999999999999999996 99999999999999
Q ss_pred cCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC-CHHHHHHHHHHhcCC------chh
Q 007834 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-GRDDIKAVASISAGN------DEF 203 (588)
Q Consensus 131 ~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~~~l~~va~ts~~~------~~~ 203 (588)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ .+.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~ 159 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADV 159 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999988 889999999999876 378
Q ss_pred HHHHHHHHHHHhccCC------c--EEEecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccc-
Q 007834 204 IGNLIADAIIKIGADG------V--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS- 274 (588)
Q Consensus 204 l~~li~dA~~~v~~~g------~--I~v~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~- 274 (588)
|+++++||+..+.+++ . |....|++..|+ ++++||+|+++|.||| |+++++||||+++|++++
T Consensus 160 la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~ 231 (517)
T 3iyg_Z 160 LTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEY 231 (517)
T ss_pred HHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEecccccc
Confidence 9999999998886532 2 333689999998 9999999999999997 788999999999999863
Q ss_pred ------------cHHhHH-----------HHHHHHhcCCCC---------EEEEecCCchHHHHHHHHHhhhccceEEEe
Q 007834 275 ------------TVKEIV-----------PLLEKTTQLSVP---------LLIIAEDISSQVLETLVMNKIRGLLNVAVV 322 (588)
Q Consensus 275 ------------~~~~l~-----------~~le~i~~~~~~---------lvI~~~~i~~~al~~L~~n~l~g~~~i~aV 322 (588)
+++++. +.++++...+.+ |||++++|+++++++|..+. |++|
T Consensus 232 ~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v 305 (517)
T 3iyg_Z 232 EKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEG------IIAL 305 (517)
T ss_pred cccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCC------CEEE
Confidence 333332 345555555443 46778999999999998763 4777
Q ss_pred eCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCcc-ceeEEEE---EEecceEEEEeCCCChHHHHHHHHHHHHH
Q 007834 323 KCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQ-LGIARKV---TVKSNSTTIVADPYTKAEIQARIMQIKKD 398 (588)
Q Consensus 323 k~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~-lG~~~~v---~~~~~~~~~i~g~~~~~~i~~ri~~l~~~ 398 (588)
++ +++.+|+|||++|||++++ +++++++++ ||+|+ | .++++++++|++|+++.
T Consensus 306 ~~-----v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~------------ 362 (517)
T 3iyg_Z 306 RR-----AKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR------------ 362 (517)
T ss_pred Ee-----cCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCch------------
Confidence 64 4589999999999999999 899999999 99999 9 46889999999998753
Q ss_pred HhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhc
Q 007834 399 LAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKN 477 (588)
Q Consensus 399 l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~ 477 (588)
.|||+|||+|+.+++|+||++|||||++|+++++| +||||||+|++|+.+|++++.
T Consensus 363 -----------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 419 (517)
T 3iyg_Z 363 -----------------------SVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKP 419 (517)
T ss_pred -----------------------hheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhc
Confidence 58999999999999999999999999999999999 999999999999999999988
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC----CCceeEEccCCcccccccCccccchHHHHHHHH
Q 007834 478 SMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQ 553 (588)
Q Consensus 478 ~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~ 553 (588)
+.++. +++++++|++||+.+|++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|+
T Consensus 420 ~~~g~-eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 498 (517)
T 3iyg_Z 420 SVKGR-AQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLH 498 (517)
T ss_pred cCCHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHH
Confidence 77665 4699999999999999999999999999999999874 568999999999999999999999999999999
Q ss_pred HHHHHHHHHHchhHHhhC
Q 007834 554 NAVSIAAVVLTTEAVLAD 571 (588)
Q Consensus 554 ~A~e~a~~lL~iD~iI~~ 571 (588)
+|+++|++|||||+||..
T Consensus 499 ~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 499 SCTVIATNILLVDEIMRA 516 (517)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999999864
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=9.9e-99 Score=839.03 Aligned_cols=466 Identities=20% Similarity=0.290 Sum_probs=409.6
Q ss_pred hhhcC-HHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 52 KILFG-KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 52 ~~~~g-~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
+...| .+||.+|+.||+.||++|||||||+||+|||++ .|+++|||||+||||+|+++||+ ||||+++|++||+
T Consensus 19 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~ 94 (568)
T 3p9d_H 19 NSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKI 94 (568)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHT
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhc
Confidence 34455 679999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCccc----CCHHHHHHHHHHhcCC-----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPV----TGRDDIKAVASISAGN----- 200 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v----~~~~~l~~va~ts~~~----- 200 (588)
++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|++++.++ ++++.|.++|+||+++
T Consensus 95 e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~ 174 (568)
T 3p9d_H 95 DMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGS 174 (568)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTC
T ss_pred eeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcch
Confidence 9999999999999999999999999999999999999999999999999999876 5788999999999753
Q ss_pred chhHHHHHHHHHHHhccC-----C-------cEEEe--cCCCcccceeeeeceEEeeccCCccccccccccccccc---c
Q 007834 201 DEFIGNLIADAIIKIGAD-----G-------VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD---N 263 (588)
Q Consensus 201 ~~~l~~li~dA~~~v~~~-----g-------~I~v~--~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~---n 263 (588)
+++|++|++||+.+++++ + .|+++ .|++++|| ++++|++|+++|. +|+++++ |
T Consensus 175 ~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n 244 (568)
T 3p9d_H 175 EDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKK 244 (568)
T ss_dssp HHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSS
T ss_pred HHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCc
Confidence 589999999999999874 3 46664 69999999 9999999999873 3788899 9
Q ss_pred eeEEEeccc-------------cccHHhHHH-----------HHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceE
Q 007834 264 AKVLITDQK-------------ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNV 319 (588)
Q Consensus 264 ~~Ill~d~~-------------i~~~~~l~~-----------~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i 319 (588)
|||++++++ +++++++.+ +++++.++|+|||||+++|+++++++|.+++ |
T Consensus 245 ~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~g------I 318 (568)
T 3p9d_H 245 HKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYG------I 318 (568)
T ss_dssp CEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHT------C
T ss_pred ceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCC------e
Confidence 999999998 566666654 6788999999999999999999999998875 5
Q ss_pred EEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE---ecceEEEEeCCCChHHHHHHHHHHH
Q 007834 320 AVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIK 396 (588)
Q Consensus 320 ~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~ 396 (588)
+|||+++ +.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|++
T Consensus 319 ~av~~v~-----~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------ 376 (568)
T 3p9d_H 319 LVLKVPS-----KFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG------------ 376 (568)
T ss_dssp EEECCCC-----HHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS------------
T ss_pred EEEecCC-----HHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCC------------
Confidence 8998877 78999999999999999 799999999999999975 4689999999862
Q ss_pred HHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHh--cC-cccCCchHHHHHHHhhh
Q 007834 397 KDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMD--EG-IVPGGGATYVHLLEHIP 473 (588)
Q Consensus 397 ~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~--~g-vvpGGGa~e~~ls~~L~ 473 (588)
|+++.|||+|||+|+.+++|+||++|||||++|++++ ++ +||||||+|++|+.+|+
T Consensus 377 ---------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~ 435 (568)
T 3p9d_H 377 ---------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRIT 435 (568)
T ss_dssp ---------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHH
T ss_pred ---------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHH
Confidence 1246899999999999999999999999999999999 65 99999999999999999
Q ss_pred hhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhcC------------CCceeEEccCCc---cccccc
Q 007834 474 IIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGR---YEDLLS 538 (588)
Q Consensus 474 ~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~~------------~~~~Gid~~~g~---i~d~~~ 538 (588)
+++.++.+.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|+ +.||++
T Consensus 436 ~~a~~~~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~ 514 (568)
T 3p9d_H 436 KYGERTPGLL-QLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIRE 514 (568)
T ss_dssp HHHHTCCSTH-HHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHH
T ss_pred HHhccCCcHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHH
Confidence 9988777765 699999999999999999999999999999999884 247899999997 999999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCCCCCC
Q 007834 539 AGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQ 582 (588)
Q Consensus 539 ~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~~~~~ 582 (588)
.|||||+.||+++|++|+|+|++|||||++|..+ |...+.+||
T Consensus 515 ~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~-~~~~~~~~~ 557 (568)
T 3p9d_H 515 ENIYDMLATKKFAINVATEAATTVLSIDQIIMAK-KAGGPRAPQ 557 (568)
T ss_dssp HHHHHHHHHHHHHHHCCEECBCCC--------------------
T ss_pred ccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhcc-ccCCCCCCC
Confidence 9999999999999999999999999999999998 876554564
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.6e-97 Score=827.08 Aligned_cols=461 Identities=22% Similarity=0.314 Sum_probs=415.2
Q ss_pred chhhcCHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007834 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (588)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (588)
.++.+|.+|+..|+.||+.||++|||||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++||+
T Consensus 10 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd~ 85 (546)
T 3p9d_F 10 AESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQDE 85 (546)
T ss_dssp EEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 466789999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHHHHHHHHHHHHHHHHhcCcccC----CHHHHHHHHHHhcCC-----
Q 007834 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT----GRDDIKAVASISAGN----- 200 (588)
Q Consensus 130 ~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~~~l~~va~ts~~~----- 200 (588)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++.|++ +++.|.++|+||+++
T Consensus 86 e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~ 165 (546)
T 3p9d_F 86 ITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDAD 165 (546)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHH
T ss_pred HhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchh
Confidence 99999999999999999999999999999999999999999999999999999884 678999999999986
Q ss_pred -chhHHHHHHHHHHHhccC-------CcEEE--ecCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEec
Q 007834 201 -DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (588)
Q Consensus 201 -~~~l~~li~dA~~~v~~~-------g~I~v--~~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d 270 (588)
.+.|+++++||+..+.+. ..|++ ..|++..|| ++++||+|+++|.||+ |+++++||||++++
T Consensus 166 ~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~ 237 (546)
T 3p9d_F 166 LTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLILN 237 (546)
T ss_dssp HCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEEC
T ss_pred HHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEec
Confidence 478999999999988631 23554 479999999 9999999999999995 88999999999999
Q ss_pred ccccc-------------HHhH-----------HHHHHHHhc---------CCCC-EEEEecCCchHHHHHHHHHhhhcc
Q 007834 271 QKIST-------------VKEI-----------VPLLEKTTQ---------LSVP-LLIIAEDISSQVLETLVMNKIRGL 316 (588)
Q Consensus 271 ~~i~~-------------~~~l-----------~~~le~i~~---------~~~~-lvI~~~~i~~~al~~L~~n~l~g~ 316 (588)
++++. ++++ ...++.+.. .|+| |||++++|+++|+++|..|+
T Consensus 238 ~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g---- 313 (546)
T 3p9d_F 238 VSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN---- 313 (546)
T ss_dssp CCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT----
T ss_pred CcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC----
Confidence 88642 2222 234555544 3444 77888899999999999886
Q ss_pred ceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEE---EecceEEEEeCCCChHHHHHHHH
Q 007834 317 LNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIM 393 (588)
Q Consensus 317 ~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~---~~~~~~~~i~g~~~~~~i~~ri~ 393 (588)
|++|++ +++.+|+|||++|||++++ +++++++++||+|+.|+ +++++|++|+||+++
T Consensus 314 --I~~vr~-----v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~-------- 373 (546)
T 3p9d_F 314 --ILALRR-----AKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP-------- 373 (546)
T ss_dssp --CEEECC-----CCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC--------
T ss_pred --CeeEec-----CCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC--------
Confidence 377764 4589999999999999999 89999999999999994 688999999999875
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhh
Q 007834 394 QIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHI 472 (588)
Q Consensus 394 ~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L 472 (588)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|
T Consensus 374 ---------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L 426 (546)
T 3p9d_F 374 ---------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYL 426 (546)
T ss_dssp ---------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHH
T ss_pred ---------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHH
Confidence 379999999999999999999999999999999999 9999999999999999
Q ss_pred hh---hhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHhhhc---------CCCceeEEccCCcccccccCc
Q 007834 473 PI---IKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT---------SDWRFGYNAMTGRYEDLLSAG 540 (588)
Q Consensus 473 ~~---~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~l~~---------~~~~~Gid~~~g~i~d~~~~g 540 (588)
++ ++.+.++.+ ++++++|++||+.||++||+|||+|+.+++.+|++ .+.++|||+.+|++.||++.|
T Consensus 427 ~~~~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~g 505 (546)
T 3p9d_F 427 RSANMNKLGAKGKT-KTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEG 505 (546)
T ss_dssp HHHHTTTTTTTSHH-HHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGT
T ss_pred HhhhhhhhcCchHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhcc
Confidence 98 577777764 69999999999999999999999999999999986 345799999999999999999
Q ss_pred cccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCC
Q 007834 541 VADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQP 576 (588)
Q Consensus 541 I~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~ 576 (588)
||||+.||+++|++|+++|++|||||+||..+ |.-
T Consensus 506 I~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~-~~~ 540 (546)
T 3p9d_F 506 IWDSYRVLRNAITGATGIASNLLLCDELLRAG-RST 540 (546)
T ss_dssp CEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC-CSS
T ss_pred CEecHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ccc
Confidence 99999999999999999999999999999987 543
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.1e-91 Score=772.57 Aligned_cols=428 Identities=22% Similarity=0.337 Sum_probs=344.3
Q ss_pred eeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCcchhHHHHHHHHHHHHhhhhCCCCcHHHHH
Q 007834 86 ILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKK 164 (588)
Q Consensus 86 mI~~-~g~~~ITnDG~tIlk~i~l~hp~~~~~akLl~~~a~~qd~~~GDGTTsvvvLa~~Ll~~~~~li~~gi~p~~I~~ 164 (588)
||++ .|+++|||||+||||+|+++||. |||++++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6788 89999999999999999999996 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCcccC--CHHHHHHHHHHhcC------CchhHHHHHHHHHHHhccC--Cc--------EEEe--
Q 007834 165 GMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAG------NDEFIGNLIADAIIKIGAD--GV--------ILIE-- 224 (588)
Q Consensus 165 g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~------~~~~l~~li~dA~~~v~~~--g~--------I~v~-- 224 (588)
||++|++.+++.|+++++|++ +++.|.++|+||++ ++++|++|++||+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999999999987 48999999998865 4689999999999999876 43 5664
Q ss_pred cCCCcccceeeeeceEEeeccCCcccccccccccccccceeEEEeccc-------------cccHHhH-----------H
Q 007834 225 SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK-------------ISTVKEI-----------V 280 (588)
Q Consensus 225 ~g~~~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~~l-----------~ 280 (588)
+|++++|+ ++++|++|+++|.||| |+++++||||+++|++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPN-------MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCC-------CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999988 9999999999999998 5778999999999999 5666665 7
Q ss_pred HHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCC
Q 007834 281 PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATS 360 (588)
Q Consensus 281 ~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~ 360 (588)
++++++.++|+||||++++|+++|+++|..|+ |+||+ ++++.+|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 89999999999999999999999999999876 47774 77799999999999999999 8999999
Q ss_pred ccceeEEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHH
Q 007834 361 DQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELED 437 (588)
Q Consensus 361 ~~lG~~~~v~~~---~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~~~~E 437 (588)
++||+|+.|++. +++|++|+||+++ +.|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQNS-----------------------------------KAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETTC-----------------------------------CCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCCC-----------------------------------ceEEEEecCCcHHHHHH
Confidence 999999999974 8999999998753 58999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC-cccCCchHHHHHHHhhhhhhcCCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHh
Q 007834 438 RKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEK 516 (588)
Q Consensus 438 ~~~~i~DAl~~~r~al~~g-vvpGGGa~e~~ls~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~L~~NaG~d~~~vl~~ 516 (588)
+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++. +++++++|++||+.||++||+|||+|+.+++++
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGR-EQLAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSH-HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999 99999999999999999998777775 469999999999999999999999999999999
Q ss_pred hhcC----CCceeEEccCCcccccccCccccchHHHHHHHHHHHHHHHHHHchhHHhhCCCCCCCC
Q 007834 517 TRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 578 (588)
Q Consensus 517 l~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~lL~iD~iI~~~~p~~~~ 578 (588)
|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|++|||||++|..+ |+.++
T Consensus 417 l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~-~~~~~ 481 (500)
T 3aq1_B 417 LRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASK-GSANQ 481 (500)
T ss_dssp HHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccCCC
Confidence 9863 4589999999999999999999999999999999999999999999999997 76544
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.6e-47 Score=356.41 Aligned_cols=193 Identities=38% Similarity=0.637 Sum_probs=189.4
Q ss_pred eeeeeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHh
Q 007834 233 IVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNK 312 (588)
Q Consensus 233 l~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~ 312 (588)
+++++||.|||||+||||+|++++|..+++||+||++|++|+++++++|+||++.+.++||+|++++|+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEecceEEEEeCCCChHHHHHHH
Q 007834 313 IRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVKSNSTTIVADPYTKAEIQARI 392 (588)
Q Consensus 313 l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~~~~~~~i~g~~~~~~i~~ri 392 (588)
++|.++|+|||+|||||.|+..|+|||++|||++++++.|+++++++.++||+|++|.+++|+++++.|.++++.|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEE
Q 007834 393 MQIKKDLAATDNAYLSRKLSERIAKLSGGVAVI 425 (588)
Q Consensus 393 ~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI 425 (588)
++|+.+++.++|+|+||+|+||++||+|+++.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998754
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.6e-45 Score=347.61 Aligned_cols=188 Identities=46% Similarity=0.773 Sum_probs=185.0
Q ss_pred eeceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhc
Q 007834 236 EEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRG 315 (588)
Q Consensus 236 i~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g 315 (588)
-+||.|||||+||||+|++++|..+++||+||++|++|+++++++|+||++.+.+.||+|++++|+++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEecceEEEEeCCCChHHHHHHHHHH
Q 007834 316 LLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVKSNSTTIVADPYTKAEIQARIMQI 395 (588)
Q Consensus 316 ~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~~~~~~~i~g~~~~~~i~~ri~~l 395 (588)
.++|+|||+|||||.|+..|+|||++|||++++++.|+++++++.++||+|++|.+++|+++++.|.++++.|++|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHhcCCeE
Q 007834 396 KKDLAATDNAYLSRKLSERIAKLSGGVA 423 (588)
Q Consensus 396 ~~~l~~~~~~~e~~~l~er~~~l~~~~~ 423 (588)
+.+++.++++|+||+|+||++||+|+++
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVA 199 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVK 199 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999876
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=5.5e-35 Score=263.36 Aligned_cols=144 Identities=49% Similarity=0.795 Sum_probs=141.9
Q ss_pred ceEEeeccCCcccccccccccccccceeEEEeccccccHHhHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHhhhccc
Q 007834 238 GMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLL 317 (588)
Q Consensus 238 Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~l~~~le~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~ 317 (588)
||.|||||+||||++++++|..+++||+||++|++|++.++++|+||++.+.++||+|++++|+++||.+|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEEecceEEEEeC
Q 007834 318 NVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTVKSNSTTIVAD 381 (588)
Q Consensus 318 ~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~~~~~~~~i~g 381 (588)
+++|||+|||||.|+..|+|||++|||++++++.|+++++.+.++||+|++|+++++++++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.89 E-value=5.7e-23 Score=196.27 Aligned_cols=146 Identities=21% Similarity=0.261 Sum_probs=121.4
Q ss_pred cccceeeeeceEEeeccCCcccccccccccccccceeEEEeccccc-------------cHHh-----------HHHHHH
Q 007834 229 FETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS-------------TVKE-----------IVPLLE 284 (588)
Q Consensus 229 ~~dsl~li~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~-------------~~~~-----------l~~~le 284 (588)
++|| ++++|++|++++.||. ||++++||||++++++++ ++++ +..+++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4688 8999999999999974 888999999999999864 2222 245678
Q ss_pred HHhcCCCCEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccce
Q 007834 285 KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLG 364 (588)
Q Consensus 285 ~i~~~~~~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG 364 (588)
++.++|+++||++++|+|.|+++|.++. |+||+ ++++.+|++||++|||++++ +++++++++||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~g------I~~vr-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRAN------VTAIR-----RVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----CCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCC------CEEEe-----cCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 8999999999999999999999998875 47776 45599999999999999999 89999999999
Q ss_pred e-EEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCeEEEEecCCCHH
Q 007834 365 I-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEV 433 (588)
Q Consensus 365 ~-~~~v~~---~~~~~~~i~g~~~~~~i~~ri~~l~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~v~G~t~~ 433 (588)
+ |+.|++ +++++++|+||.++ ..|||++||+|..
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 999984 68899999999765 4799999999863
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.81 E-value=2e-19 Score=168.56 Aligned_cols=127 Identities=22% Similarity=0.271 Sum_probs=109.6
Q ss_pred eeceEEeeccCCcccccccccccccccceeEEEeccccc-------------cHHhH-----------HHHHHHHhcCCC
Q 007834 236 EEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS-------------TVKEI-----------VPLLEKTTQLSV 291 (588)
Q Consensus 236 i~Gi~~~~~~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~-------------~~~~l-----------~~~le~i~~~~~ 291 (588)
++|++|++++.||. ||++++||||++++++++ +++++ ..+++++.++|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 57999999999975 889999999999999864 33333 356788999999
Q ss_pred CEEEEecCCchHHHHHHHHHhhhccceEEEeeCCCCCCChhHHHHHHHHHhCCeEeeccCCCcccCCCCccceeEEEEEE
Q 007834 292 PLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTGADFLSGELGLTLAGATSDQLGIARKVTV 371 (588)
Q Consensus 292 ~lvI~~~~i~~~al~~L~~n~l~g~~~i~aVk~~~~~~~~~~~Le~ia~~tG~~ii~~~~~~~l~~l~~~~lG~~~~v~~ 371 (588)
++||++++|+|.|+++|.++. |+||+ ++++.+|++||++|||++++ +++++++++||+|+.|++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~g------I~~v~-----~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCC------CEEEc-----cCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 999999999999999998865 47776 45599999999999999999 899999999999999985
Q ss_pred ---ecceEEEEeCCCCh
Q 007834 372 ---KSNSTTIVADPYTK 385 (588)
Q Consensus 372 ---~~~~~~~i~g~~~~ 385 (588)
+++++++|+||.+-
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 68899999999763
Done!