Query 007840
Match_columns 587
No_of_seqs 524 out of 2250
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 11:48:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007840.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007840hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1chca_ g.44.1.1 (A:) Immediat 99.3 8.2E-13 6E-17 104.2 4.2 48 334-385 4-52 (68)
2 d1fbva4 g.44.1.1 (A:356-434) C 99.2 2.3E-12 1.7E-16 104.6 5.2 48 336-386 24-71 (79)
3 d1iyma_ g.44.1.1 (A:) EL5 RING 99.2 1.1E-12 7.7E-17 99.1 2.6 47 334-384 4-54 (55)
4 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.2 4.1E-12 3E-16 94.7 2.9 46 337-385 2-51 (52)
5 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.2 7.9E-12 5.7E-16 97.5 4.0 49 335-386 3-56 (65)
6 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.1 1.1E-11 7.8E-16 102.0 3.9 49 335-386 23-71 (86)
7 d3dplr1 g.44.1.1 (R:19-106) RI 99.1 1.3E-11 9.8E-16 102.0 3.9 48 334-385 20-85 (88)
8 d1v87a_ g.44.1.1 (A:) Deltex p 99.1 3E-11 2.2E-15 104.5 4.4 52 335-386 25-95 (114)
9 d2baya1 g.44.1.2 (A:1-56) Pre- 99.1 2.3E-11 1.7E-15 91.9 3.0 47 337-387 2-49 (56)
10 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.0 5.9E-11 4.3E-15 100.9 5.0 49 337-386 23-71 (103)
11 d1bora_ g.44.1.1 (A:) Acute pr 99.0 4.3E-11 3.1E-15 90.3 0.8 44 336-386 7-50 (56)
12 d2c2la2 g.44.1.2 (A:225-304) S 98.9 2.4E-10 1.8E-14 92.5 3.8 49 335-386 7-55 (80)
13 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 98.9 4.2E-10 3E-14 90.6 4.3 50 334-386 7-56 (78)
14 d1jm7b_ g.44.1.1 (B:) bard1 RI 98.8 7.1E-10 5.2E-14 93.0 3.3 44 336-385 23-67 (97)
15 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.8 1.6E-09 1.2E-13 82.7 3.3 49 334-384 5-58 (60)
16 d1wgma_ g.44.1.2 (A:) Ubiquiti 98.4 4E-08 2.9E-12 82.3 3.7 48 335-386 22-70 (98)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 97.8 3E-06 2.2E-10 69.7 2.6 47 335-381 5-58 (94)
18 d2di0a1 a.5.2.4 (A:8-70) Activ 94.1 0.03 2.2E-06 41.4 4.7 41 546-586 4-45 (63)
19 d1f62a_ g.50.1.2 (A:) Williams 90.5 0.038 2.8E-06 39.0 1.2 45 337-381 2-49 (51)
20 d1wgla_ a.5.2.4 (A:) Toll-inte 90.2 0.15 1.1E-05 37.2 4.2 38 550-587 11-49 (59)
21 d1mn3a_ a.5.2.4 (A:) Vacuolar 88.6 0.21 1.5E-05 35.7 4.0 42 546-587 10-52 (54)
22 d1fp0a1 g.50.1.2 (A:19-88) Nuc 85.9 0.11 8.1E-06 39.2 1.2 48 336-383 8-55 (70)
23 d1wila_ g.50.1.3 (A:) Hypothet 85.0 0.26 1.9E-05 38.0 2.9 32 333-365 13-47 (89)
24 d1mm2a_ g.50.1.2 (A:) Mi2-beta 84.1 0.096 7E-06 38.4 0.1 50 334-383 8-57 (61)
25 d2cs3a1 g.44.1.3 (A:8-87) Prot 78.2 0.73 5.3E-05 34.3 3.1 44 336-379 9-57 (80)
26 d1we9a_ g.50.1.2 (A:) PHD fing 70.1 0.22 1.6E-05 36.5 -1.6 49 334-382 5-58 (64)
27 d1wesa_ g.50.1.2 (A:) PHD Inhi 64.8 1 7.6E-05 33.7 1.3 44 337-382 17-65 (71)
28 d1zbdb_ g.50.1.1 (B:) Effector 60.7 2.2 0.00016 35.3 2.7 28 335-362 48-80 (124)
29 d1weva_ g.50.1.2 (A:) PHD fing 60.4 1.3 9.2E-05 34.3 1.1 51 334-384 15-74 (88)
30 d1wepa_ g.50.1.2 (A:) PHD fing 53.8 6.1 0.00045 29.6 4.1 47 336-383 12-64 (79)
31 d1weoa_ g.44.1.1 (A:) Cellulos 48.8 20 0.0014 27.3 6.2 48 335-385 16-70 (93)
32 d1y02a2 g.50.1.1 (A:20-70) Rif 46.5 0.81 5.9E-05 32.1 -2.1 42 336-381 1-46 (51)
33 d1z60a1 g.49.1.2 (A:328-386) T 41.5 4.3 0.00031 29.0 1.2 42 334-379 14-58 (59)
34 d1weea_ g.50.1.2 (A:) PHD fing 40.7 1 7.6E-05 33.5 -2.5 45 337-382 18-66 (72)
35 d1wema_ g.50.1.2 (A:) Death as 37.9 5.8 0.00042 29.3 1.5 45 336-382 17-70 (76)
36 d2pnxa1 g.50.1.2 (A:195-245) I 37.2 2.5 0.00018 29.3 -0.7 41 337-381 4-50 (51)
37 d2co8a2 g.39.1.3 (A:8-43) Nedd 36.3 6.9 0.0005 25.1 1.4 28 334-361 7-35 (36)
38 d1x3ha1 g.39.1.3 (A:8-42) Leup 35.4 4.8 0.00035 25.7 0.6 27 335-361 8-34 (35)
39 d2o35a1 a.293.1.1 (A:2-80) Hyp 32.4 8.1 0.00059 28.9 1.5 12 357-368 40-51 (79)
40 d2dloa1 g.39.1.3 (A:8-42) Thyr 32.1 5.5 0.0004 25.3 0.4 26 336-361 9-34 (35)
41 d1dvpa2 g.50.1.1 (A:149-220) H 30.1 7.8 0.00057 28.6 1.1 28 335-362 13-44 (72)
42 d2jnea1 g.41.18.1 (A:1-71) Hyp 29.5 1.1 8.3E-05 33.3 -3.8 41 336-385 3-43 (71)
43 d1vfya_ g.50.1.1 (A:) vps27p p 29.4 11 0.00081 27.2 1.9 28 335-362 5-36 (67)
44 d1x6aa1 g.39.1.3 (A:8-41) Lim 26.6 13 0.00092 23.2 1.4 28 334-361 7-34 (34)
45 d2d8ya1 g.39.1.3 (A:9-43) Epli 26.5 9.9 0.00072 24.2 0.9 27 335-361 7-34 (35)
46 d1joca1 g.50.1.1 (A:1348-1411) 25.3 14 0.001 26.4 1.7 27 336-362 9-39 (64)
47 d1v6ga1 g.39.1.3 (A:1-41) Acti 25.2 9.5 0.0007 25.1 0.7 29 333-361 13-41 (41)
No 1
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.28 E-value=8.2e-13 Score=104.16 Aligned_cols=48 Identities=31% Similarity=0.766 Sum_probs=41.7
Q ss_pred CCCCCcccccccccc-cccccCCcchHHHHHHHHHhCCCCCCCCcCcCccccc
Q 007840 334 YDDECAICREPMAKA-KKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV 385 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~-~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~ 385 (587)
..+.|+||++.+.++ +.+||||.||..|+.+|+++ +.+||+||+++..
T Consensus 4 ~~d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~----~~~CP~CR~~i~~ 52 (68)
T d1chca_ 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQ----NPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHH----SCSTTTTCCCCCC
T ss_pred CCCCCccCCcCccCCcEEeCCCCcCcHHHHHHHHHh----CCcCCCCCcchHh
Confidence 456899999999776 45799999999999999998 5899999998753
No 2
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=2.3e-12 Score=104.61 Aligned_cols=48 Identities=33% Similarity=0.655 Sum_probs=43.0
Q ss_pred CCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 336 DECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
..|+||++.+.+++.+||||.||..|+..|+..+ +..||+||..+...
T Consensus 24 ~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~---~~~CP~Cr~~i~~~ 71 (79)
T d1fbva4 24 QLCKICAENDKDVKIEPCGHLMCTSCLTSWQESE---GQGCPFCRCEIKGT 71 (79)
T ss_dssp TBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTT---CCSCTTTCCCCCCC
T ss_pred CCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHC---cCcCCCCCcCccCC
Confidence 4699999999999999999999999999999863 47899999998654
No 3
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.23 E-value=1.1e-12 Score=99.08 Aligned_cols=47 Identities=34% Similarity=0.825 Sum_probs=39.6
Q ss_pred CCCCCcccccccccc---ccc-ccCCcchHHHHHHHHHhCCCCCCCCcCcCcccc
Q 007840 334 YDDECAICREPMAKA---KKL-LCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLF 384 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~---~~l-pC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~ 384 (587)
.+.+|+||++++.++ .++ +|||.||..|+.+|+++ +.+||+||+++.
T Consensus 4 d~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~----~~~CP~CR~~i~ 54 (55)
T d1iyma_ 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCCSC
T ss_pred CCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHh----CCcCCCCCCEeE
Confidence 345799999999764 344 59999999999999988 589999999864
No 4
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=4.1e-12 Score=94.69 Aligned_cols=46 Identities=28% Similarity=0.553 Sum_probs=38.5
Q ss_pred CCcccccccccc----cccccCCcchHHHHHHHHHhCCCCCCCCcCcCccccc
Q 007840 337 ECAICREPMAKA----KKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV 385 (587)
Q Consensus 337 ~C~IC~e~~~~~----~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~ 385 (587)
+|+||+++++.. +.++|||.||..|+.+|+++. +..||+||+++..
T Consensus 2 eCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~---~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 2 ECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDE---NGLCPACRKPYPE 51 (52)
T ss_dssp EETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTS---CCBCTTTCCBCSC
T ss_pred CCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhc---CCCCCccCCcCCC
Confidence 699999999653 345899999999999999864 4679999998754
No 5
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15 E-value=7.9e-12 Score=97.50 Aligned_cols=49 Identities=24% Similarity=0.604 Sum_probs=39.6
Q ss_pred CCCCcccccccccc-----cccccCCcchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 335 DDECAICREPMAKA-----KKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 335 ~~~C~IC~e~~~~~-----~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
+.+|+||++.+..+ ..++|||.||..|+.+|+.++ +..||+||+++...
T Consensus 3 d~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~---~~~CP~CR~~i~~~ 56 (65)
T d1g25a_ 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRG---AGNCPECGTPLRKS 56 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTT---SSSCTTTCCCCSSC
T ss_pred CCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcC---cCCCCCCCcCcccc
Confidence 45899999986432 345899999999999999764 46799999988654
No 6
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.13 E-value=1.1e-11 Score=101.96 Aligned_cols=49 Identities=33% Similarity=0.660 Sum_probs=43.5
Q ss_pred CCCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 335 DDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 335 ~~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
+-.|+||++.+.+++.++|||.||..||.+|++.+ +..||+||.++...
T Consensus 23 ~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~---~~~CP~Cr~p~~~~ 71 (86)
T d1rmda2 23 SISCQICEHILADPVETSCKHLFCRICILRCLKVM---GSYCPSCRYPCFPT 71 (86)
T ss_dssp HTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHT---CSBCTTTCCBCCGG
T ss_pred CcCCccCCcchhcceecCCCChhhHHHHHHHHhhC---CCcCcccCCCCChh
Confidence 35899999999999999999999999999999864 46899999987654
No 7
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=1.3e-11 Score=102.03 Aligned_cols=48 Identities=33% Similarity=0.740 Sum_probs=39.9
Q ss_pred CCCCCccccccccc------------------ccccccCCcchHHHHHHHHHhCCCCCCCCcCcCccccc
Q 007840 334 YDDECAICREPMAK------------------AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV 385 (587)
Q Consensus 334 ~~~~C~IC~e~~~~------------------~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~ 385 (587)
.++.|+||++.+.+ ...++|||.||..||.+|+++ +.+||+||++...
T Consensus 20 ~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~----~~~CP~CR~~~~~ 85 (88)
T d3dplr1 20 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT----RQVCPLDNREWEF 85 (88)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTT----CSBCSSSCSBCCE
T ss_pred CCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHH----CCcCCCCCCcccc
Confidence 45679999998854 134689999999999999998 5899999998753
No 8
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.07 E-value=3e-11 Score=104.55 Aligned_cols=52 Identities=33% Similarity=0.708 Sum_probs=40.3
Q ss_pred CCCCcccccccccc------------------cccccCCcchHHHHHHHHHhCC-CCCCCCcCcCcccccC
Q 007840 335 DDECAICREPMAKA------------------KKLLCNHLFHLACLRSWLDQGL-NEMYSCPTCRKPLFVG 386 (587)
Q Consensus 335 ~~~C~IC~e~~~~~------------------~~lpC~H~Fh~~Cl~~wl~~~~-~~~~~CP~CR~~l~~~ 386 (587)
++.|+||++++..+ ..++|||.||..||.+|++... ..+.+||+||..+...
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred cccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhccC
Confidence 56799999998532 3468999999999999998642 1235899999887554
No 9
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.06 E-value=2.3e-11 Score=91.94 Aligned_cols=47 Identities=17% Similarity=0.269 Sum_probs=42.4
Q ss_pred CCcccccccccccccc-cCCcchHHHHHHHHHhCCCCCCCCcCcCcccccCC
Q 007840 337 ECAICREPMAKAKKLL-CNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGR 387 (587)
Q Consensus 337 ~C~IC~e~~~~~~~lp-C~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~~ 387 (587)
.|+||++.+++|+.++ |||+||++||.+|+++ +..||+||+++..++
T Consensus 2 ~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~----~~~CP~c~~~l~~~d 49 (56)
T d2baya1 2 LCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD----TGNDPITNEPLSIEE 49 (56)
T ss_dssp CCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHH----HSBCTTTCCBCCGGG
T ss_pred CCccCCchHHhcCccCCCCCcccHHHHHHHHhh----ccCCCccCCcCCHHh
Confidence 5999999999999885 9999999999999998 579999999987643
No 10
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=5.9e-11 Score=100.95 Aligned_cols=49 Identities=29% Similarity=0.653 Sum_probs=42.5
Q ss_pred CCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 337 ECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 337 ~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
.|+||++.+.+|+.++|||.||..|+..|+.+... ...||.||.++...
T Consensus 23 ~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~-~~~CP~Cr~~~~~~ 71 (103)
T d1jm7a_ 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKG-PSQCPLCKNDITKR 71 (103)
T ss_dssp SCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSS-SCCCTTTSCCCCTT
T ss_pred CCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCC-CCcCcCCCCcCChh
Confidence 69999999999999999999999999999987421 25899999988643
No 11
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96 E-value=4.3e-11 Score=90.35 Aligned_cols=44 Identities=30% Similarity=0.626 Sum_probs=38.9
Q ss_pred CCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 336 DECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
-.|+||++.+.+++.+||||.||..|+.+| +..||+||+++...
T Consensus 7 l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~-------~~~CP~Cr~~~~~~ 50 (56)
T d1bora_ 7 LRCQQCQAEAKCPKLLPCLHTLCSGCLEAS-------GMQCPICQAPWPLG 50 (56)
T ss_dssp SSCSSSCSSCBCCSCSTTSCCSBTTTCSSS-------SSSCSSCCSSSSCC
T ss_pred CCCcccCcccCCCEEecCCCHHhHHHHHcC-------CCcCcCCCCcccCC
Confidence 489999999999999999999999998654 46899999998754
No 12
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.92 E-value=2.4e-10 Score=92.55 Aligned_cols=49 Identities=16% Similarity=-0.012 Sum_probs=43.5
Q ss_pred CCCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 335 DDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 335 ~~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
+-.|+||++.|.+|+.++|||+||..||.+|+.++ +..||.||.++...
T Consensus 7 ~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~---~~~cP~c~~~l~~~ 55 (80)
T d2c2la2 7 YLCGKISFELMREPCITPSGITYDRKDIEEHLQRV---GHFNPVTRSPLTQE 55 (80)
T ss_dssp TTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT---CSSCTTTCCCCCGG
T ss_pred cccCcCcCchhhhhcccCCcCeecHHHHHHHHhcC---CccCCCcccccccc
Confidence 44799999999999999999999999999999875 56899999987543
No 13
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.89 E-value=4.2e-10 Score=90.62 Aligned_cols=50 Identities=22% Similarity=0.459 Sum_probs=44.2
Q ss_pred CCCCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 334 YDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
.+-.|+||++.|.+|+.++|||+||+.||..|++.+ ...||.|+.++...
T Consensus 7 ~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~---~~~cP~~~~~l~~~ 56 (78)
T d1t1ha_ 7 EYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAG---HKTCPKSQETLLHA 56 (78)
T ss_dssp SSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTT---CCBCTTTCCBCSSC
T ss_pred ccCCCcCcCchhhCceEccCCCcchHHHHHHHHHHC---CCCCCcccccCCcc
Confidence 345899999999999999999999999999999874 46899999987653
No 14
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.81 E-value=7.1e-10 Score=93.02 Aligned_cols=44 Identities=25% Similarity=0.723 Sum_probs=38.8
Q ss_pred CCCccccccccccccc-ccCCcchHHHHHHHHHhCCCCCCCCcCcCccccc
Q 007840 336 DECAICREPMAKAKKL-LCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV 385 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~l-pC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~ 385 (587)
-.|+||++.|.+|+.+ +|||.||..|+.+|+. ..||.||.++..
T Consensus 23 l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~------~~CP~Cr~~~~~ 67 (97)
T d1jm7b_ 23 LRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG------TGCPVCYTPAWI 67 (97)
T ss_dssp TSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT------TBCSSSCCBCSC
T ss_pred CCCccCCchhhcCceeCCCCCchhHHHHHHHHh------ccccccCCcCch
Confidence 3799999999999876 8999999999999985 369999988754
No 15
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.76 E-value=1.6e-09 Score=82.69 Aligned_cols=49 Identities=24% Similarity=0.493 Sum_probs=39.5
Q ss_pred CCCCCccccccccccccccc-----CCcchHHHHHHHHHhCCCCCCCCcCcCcccc
Q 007840 334 YDDECAICREPMAKAKKLLC-----NHLFHLACLRSWLDQGLNEMYSCPTCRKPLF 384 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~~~lpC-----~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~ 384 (587)
....|.||++++.+....|| +|.||..||.+|+.... +.+||+||+++.
T Consensus 5 d~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~--~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISR--NTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHT--CSBCTTTCCBCC
T ss_pred CCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCC--CCCCcccCCeee
Confidence 45689999999887766665 49999999999996531 468999999864
No 16
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.45 E-value=4e-08 Score=82.27 Aligned_cols=48 Identities=17% Similarity=0.076 Sum_probs=42.5
Q ss_pred CCCCcccccccccccccccCC-cchHHHHHHHHHhCCCCCCCCcCcCcccccC
Q 007840 335 DDECAICREPMAKAKKLLCNH-LFHLACLRSWLDQGLNEMYSCPTCRKPLFVG 386 (587)
Q Consensus 335 ~~~C~IC~e~~~~~~~lpC~H-~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~~ 386 (587)
+-.|+||.+-|.+|+.++||| .|++.||..|+.+ +..||.||.++...
T Consensus 22 ~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~----~~~~P~~~~~l~~~ 70 (98)
T d1wgma_ 22 EFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS----DQTDPFNRSPLTMD 70 (98)
T ss_dssp TTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT----SCBCTTTCSBCCTT
T ss_pred HhCCcCchhHHHHHHhcccccchhhHHHHHHHHHh----cCCcccccccccch
Confidence 458999999999999999775 8999999999987 57999999988654
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.82 E-value=3e-06 Score=69.66 Aligned_cols=47 Identities=21% Similarity=0.540 Sum_probs=34.6
Q ss_pred CCCCccccccccc---ccccccCCcchHHHHHHHHHhC----CCCCCCCcCcCc
Q 007840 335 DDECAICREPMAK---AKKLLCNHLFHLACLRSWLDQG----LNEMYSCPTCRK 381 (587)
Q Consensus 335 ~~~C~IC~e~~~~---~~~lpC~H~Fh~~Cl~~wl~~~----~~~~~~CP~CR~ 381 (587)
...|+||++++.. ...++|||.||.+|+..|++.. ......||.|+.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCC
Confidence 4589999999854 2345899999999999999642 111246998654
No 18
>d2di0a1 a.5.2.4 (A:8-70) Activating signal cointegrator 1 complex subunit 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.08 E-value=0.03 Score=41.40 Aligned_cols=41 Identities=22% Similarity=0.459 Sum_probs=38.3
Q ss_pred HhHHHHHHHHhhhCCCCchHHHHHHhhccC-ChhHHHHhhhc
Q 007840 546 ANILAMAETVREVLPHMPEDLIFQDLQRTN-SATITVNNLLQ 586 (587)
Q Consensus 546 ~~~~~m~~~v~~~~p~~p~~~~~~~l~~~~-~~~~t~~~~~~ 586 (587)
.++++..+||+++|||....-|.+=|..-+ +++-.|++|||
T Consensus 4 vel~s~I~qV~Dl~PdLG~GFi~~~L~~Y~~n~E~vI~~lLe 45 (63)
T d2di0a1 4 VELDSLISQVKDLLPDLGEGFILACLEYYHYDPEQVINNILE 45 (63)
T ss_dssp HHHHHHHHHHHHHCCSSCHHHHHHHHHHTTTCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHHc
Confidence 578899999999999999999999998876 99999999997
No 19
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.54 E-value=0.038 Score=39.04 Aligned_cols=45 Identities=36% Similarity=0.805 Sum_probs=32.7
Q ss_pred CCccccccccccccc---ccCCcchHHHHHHHHHhCCCCCCCCcCcCc
Q 007840 337 ECAICREPMAKAKKL---LCNHLFHLACLRSWLDQGLNEMYSCPTCRK 381 (587)
Q Consensus 337 ~C~IC~e~~~~~~~l---pC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~ 381 (587)
.|.||...-+....+ .|...||..|+..-+.........||.||.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 588997765444333 688999999998776554444678999985
No 20
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.16 E-value=0.15 Score=37.17 Aligned_cols=38 Identities=24% Similarity=0.473 Sum_probs=32.8
Q ss_pred HHHHHHhhhCCCCchHHHHHHhhcc-CChhHHHHhhhcC
Q 007840 550 AMAETVREVLPHMPEDLIFQDLQRT-NSATITVNNLLQM 587 (587)
Q Consensus 550 ~m~~~v~~~~p~~p~~~~~~~l~~~-~~~~~t~~~~~~~ 587 (587)
...++.+|+||.+..++|..=|... ++||.+|+-||+|
T Consensus 11 e~i~~LkeMFP~~D~~vI~~VL~a~~G~vd~aid~LL~M 49 (59)
T d1wgla_ 11 EDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQM 49 (59)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 3468999999999999998877654 5899999999998
No 21
>d1mn3a_ a.5.2.4 (A:) Vacuolar protein sorting-associated protein vps9 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.65 E-value=0.21 Score=35.67 Aligned_cols=42 Identities=19% Similarity=0.250 Sum_probs=35.0
Q ss_pred HhHHHHHHHHhhhCCCCchHHHHHHhh-ccCChhHHHHhhhcC
Q 007840 546 ANILAMAETVREVLPHMPEDLIFQDLQ-RTNSATITVNNLLQM 587 (587)
Q Consensus 546 ~~~~~m~~~v~~~~p~~p~~~~~~~l~-~~~~~~~t~~~~~~~ 587 (587)
.+.....++.+++||.+..++|..=|. .-++||.+|+-+|+|
T Consensus 10 ~e~~e~~~~Lk~MFP~~D~~VI~~VL~a~~G~vd~aidaLL~M 52 (54)
T d1mn3a_ 10 NERKDTLNTLQNMFPDMDPSLIEDVCIAKKSRIEPCVDALLSL 52 (54)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHSCSSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 556777899999999999998876554 446899999999987
No 22
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.95 E-value=0.11 Score=39.18 Aligned_cols=48 Identities=27% Similarity=0.522 Sum_probs=31.3
Q ss_pred CCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCccc
Q 007840 336 DECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l 383 (587)
..|.+|.+.-+-..--.|...||..|+.+.+.........||.|+..-
T Consensus 8 ~~C~~C~~~~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 55 (70)
T d1fp0a1 8 TICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 55 (70)
T ss_dssp SCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCCCCCcCEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcC
Confidence 457777654211111268999999999887765444467899997543
No 23
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.98 E-value=0.26 Score=38.03 Aligned_cols=32 Identities=31% Similarity=0.745 Sum_probs=25.5
Q ss_pred cCCCCCcccccccccccccc---cCCcchHHHHHHH
Q 007840 333 AYDDECAICREPMAKAKKLL---CNHLFHLACLRSW 365 (587)
Q Consensus 333 ~~~~~C~IC~e~~~~~~~lp---C~H~Fh~~Cl~~w 365 (587)
..|..|.|| +.+....++| |+-+||..|+++.
T Consensus 13 ~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 13 VNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CcCcccccc-CcccccceecceeecchhhHHHHHHh
Confidence 467899999 6666666665 7799999999876
No 24
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.14 E-value=0.096 Score=38.38 Aligned_cols=50 Identities=24% Similarity=0.486 Sum_probs=33.1
Q ss_pred CCCCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCccc
Q 007840 334 YDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 383 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l 383 (587)
.++.|.+|.+.-+-..--.|.-.||..|+...+.........||.|+.+-
T Consensus 8 ~~~~C~~C~~~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~~ 57 (61)
T d1mm2a_ 8 HMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CcCCCcCCCCCCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCcc
Confidence 35579999864321112268899999998765544333467899997653
No 25
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.25 E-value=0.73 Score=34.33 Aligned_cols=44 Identities=25% Similarity=0.567 Sum_probs=33.0
Q ss_pred CCCccccccccccccccc----CCcchHHHHHHHHHhC-CCCCCCCcCc
Q 007840 336 DECAICREPMAKAKKLLC----NHLFHLACLRSWLDQG-LNEMYSCPTC 379 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~lpC----~H~Fh~~Cl~~wl~~~-~~~~~~CP~C 379 (587)
-.|.+|.|.+++.....| +|-||..|-+..+++. ....-.||.=
T Consensus 9 l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~q~~~~evyCPSG 57 (80)
T d2cs3a1 9 LCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSG 57 (80)
T ss_dssp CCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHHHSSSCCCCTTS
T ss_pred eeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHhcCCCCcEECCCC
Confidence 479999999999876666 5999999999988764 2223456554
No 26
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=70.06 E-value=0.22 Score=36.52 Aligned_cols=49 Identities=27% Similarity=0.657 Sum_probs=32.4
Q ss_pred CCCCCcccccccccccc-c---ccCCcchHHHHHHHHHhC-CCCCCCCcCcCcc
Q 007840 334 YDDECAICREPMAKAKK-L---LCNHLFHLACLRSWLDQG-LNEMYSCPTCRKP 382 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~~~-l---pC~H~Fh~~Cl~~wl~~~-~~~~~~CP~CR~~ 382 (587)
.+..|.+|.+...+... + .|+.-||..|+..-.... ......||.|+..
T Consensus 5 ~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 34589999987655432 2 689999999985321111 1135789999754
No 27
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=64.80 E-value=1 Score=33.70 Aligned_cols=44 Identities=23% Similarity=0.583 Sum_probs=27.6
Q ss_pred CCccccccccccc-cc---ccC-CcchHHHHHHHHHhCCCCCCCCcCcCcc
Q 007840 337 ECAICREPMAKAK-KL---LCN-HLFHLACLRSWLDQGLNEMYSCPTCRKP 382 (587)
Q Consensus 337 ~C~IC~e~~~~~~-~l---pC~-H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~ 382 (587)
.+-||.+...... .. .|. .-||..|+. +.........||.|+..
T Consensus 17 ~~CiC~~~~~~~~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 17 TYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp CCSTTCCCCCSSEECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred CEEEeCCCCCCCEEEEECCCCCCcCccCccCC--CCcCCCCcEECcCCccc
Confidence 3449998654332 22 344 469999984 34444446899999764
No 28
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=60.72 E-value=2.2 Score=35.29 Aligned_cols=28 Identities=18% Similarity=0.408 Sum_probs=20.5
Q ss_pred CCCCccccccccc--cc---ccccCCcchHHHH
Q 007840 335 DDECAICREPMAK--AK---KLLCNHLFHLACL 362 (587)
Q Consensus 335 ~~~C~IC~e~~~~--~~---~lpC~H~Fh~~Cl 362 (587)
...|.+|...|.. .. ...||+.||..|-
T Consensus 48 ~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~ 80 (124)
T d1zbdb_ 48 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 80 (124)
T ss_dssp SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence 4579999998753 11 3478999998884
No 29
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.42 E-value=1.3 Score=34.31 Aligned_cols=51 Identities=18% Similarity=0.559 Sum_probs=32.1
Q ss_pred CCCCCcccccccccc--ccc---ccCCcchHHHHHHHH----HhCCCCCCCCcCcCcccc
Q 007840 334 YDDECAICREPMAKA--KKL---LCNHLFHLACLRSWL----DQGLNEMYSCPTCRKPLF 384 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~--~~l---pC~H~Fh~~Cl~~wl----~~~~~~~~~CP~CR~~l~ 384 (587)
.+..|.||....... ..+ .|+..||..|+...+ .........||.|.....
T Consensus 15 ~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~~~ 74 (88)
T d1weva_ 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCchHh
Confidence 355799998754321 222 688999999986432 121222478999976543
No 30
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.78 E-value=6.1 Score=29.62 Aligned_cols=47 Identities=26% Similarity=0.633 Sum_probs=29.6
Q ss_pred CCCccccccccccc-cc---ccCCcchHHHHH--HHHHhCCCCCCCCcCcCccc
Q 007840 336 DECAICREPMAKAK-KL---LCNHLFHLACLR--SWLDQGLNEMYSCPTCRKPL 383 (587)
Q Consensus 336 ~~C~IC~e~~~~~~-~l---pC~H~Fh~~Cl~--~wl~~~~~~~~~CP~CR~~l 383 (587)
+.|-||....+... .+ .|+--||..|+. ..-. .......||.|+...
T Consensus 12 pv~CiC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~-~~~~~~~C~~C~~~~ 64 (79)
T d1wepa_ 12 PVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENA-VDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHH-TTCSBBCCTTTTTTS
T ss_pred CeEeECCCccCCCCcEEECCCCCCcEeccccCcchhcC-CCCCEEECccCcCCc
Confidence 34559987654432 22 688999999984 2211 112258999998653
No 31
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=48.80 E-value=20 Score=27.29 Aligned_cols=48 Identities=19% Similarity=0.420 Sum_probs=34.0
Q ss_pred CCCCcccccccccc---c----ccccCCcchHHHHHHHHHhCCCCCCCCcCcCccccc
Q 007840 335 DDECAICREPMAKA---K----KLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV 385 (587)
Q Consensus 335 ~~~C~IC~e~~~~~---~----~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~ 385 (587)
...|-||-+..... . .-.|+--.|+.|..-=.+.+ ++.||.|+.....
T Consensus 16 ~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG---~q~CpqCkt~Ykr 70 (93)
T d1weoa_ 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREG---TQNCPQCKTRYKR 70 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTS---CSSCTTTCCCCCC
T ss_pred cchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhcc---CccCcccCChhhh
Confidence 45899999986432 1 12577778999986544443 6899999987654
No 32
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.52 E-value=0.81 Score=32.06 Aligned_cols=42 Identities=21% Similarity=0.523 Sum_probs=27.9
Q ss_pred CCCcccccccccccc----cccCCcchHHHHHHHHHhCCCCCCCCcCcCc
Q 007840 336 DECAICREPMAKAKK----LLCNHLFHLACLRSWLDQGLNEMYSCPTCRK 381 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~----lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~ 381 (587)
+.|.+|...|....+ -.||.+||..|....-.. ...|..|.+
T Consensus 1 p~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~----~RvC~~C~~ 46 (51)
T d1y02a2 1 PSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNG----PRLCLLCQR 46 (51)
T ss_dssp CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC--------CCEEHHHHH
T ss_pred CCccccCCcccCCccCcccccCCcccCccccCCCCCC----CeECHhHhh
Confidence 368999998875433 379999999997543222 356777753
No 33
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.50 E-value=4.3 Score=29.04 Aligned_cols=42 Identities=21% Similarity=0.638 Sum_probs=29.0
Q ss_pred CCCCCccccccccccc---ccccCCcchHHHHHHHHHhCCCCCCCCcCc
Q 007840 334 YDDECAICREPMAKAK---KLLCNHLFHLACLRSWLDQGLNEMYSCPTC 379 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~~---~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~C 379 (587)
....|--|..++.+.. --.|++.||.+|- -.+... -..||-|
T Consensus 14 ~~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD-~fiHe~---lh~CpgC 58 (59)
T d1z60a1 14 GERFCYGCQGELKDQHVYVCAVCQNVFCVDCD-VFVHDS---LHSCPGC 58 (59)
T ss_dssp SCCEETTTTEECTTSEEECCTTTTCCBCHHHH-HTTTTT---SCSSSTT
T ss_pred CCCCccCCCCcCCCCceEECcCCCCccccccc-hhhhhh---hcCCCCC
Confidence 3457999998887543 2369999999994 223222 3679988
No 34
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=40.66 E-value=1 Score=33.49 Aligned_cols=45 Identities=20% Similarity=0.465 Sum_probs=28.9
Q ss_pred CCcccccccccccc-c---ccCCcchHHHHHHHHHhCCCCCCCCcCcCcc
Q 007840 337 ECAICREPMAKAKK-L---LCNHLFHLACLRSWLDQGLNEMYSCPTCRKP 382 (587)
Q Consensus 337 ~C~IC~e~~~~~~~-l---pC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~ 382 (587)
.| ||....++... + .|..-||..|+..-.....+....||.|+..
T Consensus 18 ~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~ 66 (72)
T d1weea_ 18 DC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp CC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred Ee-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCc
Confidence 47 78765544432 2 6889999999854222223346889999764
No 35
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.92 E-value=5.8 Score=29.28 Aligned_cols=45 Identities=33% Similarity=0.735 Sum_probs=27.8
Q ss_pred CCCccccccccccccc---ccCCcchHHHHH------HHHHhCCCCCCCCcCcCcc
Q 007840 336 DECAICREPMAKAKKL---LCNHLFHLACLR------SWLDQGLNEMYSCPTCRKP 382 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~l---pC~H~Fh~~Cl~------~wl~~~~~~~~~CP~CR~~ 382 (587)
..| ||.........+ .|.--||..|+. ..... ......||.|+..
T Consensus 17 ~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~-~~~~w~C~~C~~~ 70 (76)
T d1wema_ 17 LYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLER-NGEDYICPNCTIL 70 (76)
T ss_dssp CCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHH-HTCCCCCHHHHHH
T ss_pred CEE-ECCCccCCCeEEEECCCCCcCCccccCCCcccccccCC-CCCcEECCCCcCc
Confidence 357 887765544344 578889999982 11111 1125899999754
No 36
>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}
Probab=37.16 E-value=2.5 Score=29.30 Aligned_cols=41 Identities=27% Similarity=0.727 Sum_probs=25.5
Q ss_pred CCcccccccccccccc-----cC-CcchHHHHHHHHHhCCCCCCCCcCcCc
Q 007840 337 ECAICREPMAKAKKLL-----CN-HLFHLACLRSWLDQGLNEMYSCPTCRK 381 (587)
Q Consensus 337 ~C~IC~e~~~~~~~lp-----C~-H~Fh~~Cl~~wl~~~~~~~~~CP~CR~ 381 (587)
-| ||..+..+. .+. |- --||..|+. +.........||.|++
T Consensus 4 yC-~C~~~~~~~-mi~Cd~~~C~~~WfH~~Cvg--l~~~p~~~w~C~~C~~ 50 (51)
T d2pnxa1 4 YC-LCHQVSYGE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 50 (51)
T ss_dssp ET-TTTEECCSE-EEECSCTTCSSCEEEGGGGT--CSSCCSSCCCCHHHHC
T ss_pred EE-EcCCCCCCC-EEEEecCCCCCCCEeCCccC--CCcCCCCcEECcCCCC
Confidence 47 787765432 333 33 359999985 3333344678999875
No 37
>d2co8a2 g.39.1.3 (A:8-43) Nedd9 interacting protein with calponin homology, NICAL (MICAL1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.25 E-value=6.9 Score=25.10 Aligned_cols=28 Identities=36% Similarity=0.757 Sum_probs=20.9
Q ss_pred CCCCCcccccccccccccc-cCCcchHHH
Q 007840 334 YDDECAICREPMAKAKKLL-CNHLFHLAC 361 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~~~lp-C~H~Fh~~C 361 (587)
..+.|.+|-...-...++. =|+.||+.|
T Consensus 7 ~~~~C~~C~K~VY~~Erl~a~g~~yHk~C 35 (36)
T d2co8a2 7 AGDLCALCGEHLYVLERLCVNGHFFHRSC 35 (36)
T ss_dssp SSCBCSSSCCBCCTTTBCCBTTBCCBTTT
T ss_pred CCCcccccCCEEeeeeEEEecCcEecccc
Confidence 3568999988766655554 568899988
No 38
>d1x3ha1 g.39.1.3 (A:8-42) Leupaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.41 E-value=4.8 Score=25.65 Aligned_cols=27 Identities=19% Similarity=0.540 Sum_probs=23.3
Q ss_pred CCCCcccccccccccccccCCcchHHH
Q 007840 335 DDECAICREPMAKAKKLLCNHLFHLAC 361 (587)
Q Consensus 335 ~~~C~IC~e~~~~~~~lpC~H~Fh~~C 361 (587)
.+.|..|.++.........|..||.+|
T Consensus 8 apkC~~C~~~I~g~~v~Al~~~wHpeC 34 (35)
T d1x3ha1 8 SPKCGGCNRPVLENYLSAMDTVWHPEC 34 (35)
T ss_dssp SCBCTTTCCBCCSSCEEETTEEECTTT
T ss_pred ChhhhhcCCcccchheeecCCccCccc
Confidence 468999999998877778899999887
No 39
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=32.44 E-value=8.1 Score=28.93 Aligned_cols=12 Identities=33% Similarity=0.971 Sum_probs=10.9
Q ss_pred chHHHHHHHHHh
Q 007840 357 FHLACLRSWLDQ 368 (587)
Q Consensus 357 Fh~~Cl~~wl~~ 368 (587)
||+.|+.+|...
T Consensus 40 FCRNCLskWy~~ 51 (79)
T d2o35a1 40 FCRNCLSNWYRE 51 (79)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999999875
No 40
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.13 E-value=5.5 Score=25.31 Aligned_cols=26 Identities=23% Similarity=0.655 Sum_probs=21.8
Q ss_pred CCCcccccccccccccccCCcchHHH
Q 007840 336 DECAICREPMAKAKKLLCNHLFHLAC 361 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~lpC~H~Fh~~C 361 (587)
+.|.+|-+.+.+-+.-..|-.||..|
T Consensus 9 EkC~~C~~~I~driLrA~Gk~yHP~C 34 (35)
T d2dloa1 9 EKCATCSQPILDRILRAMGKAYHPGC 34 (35)
T ss_dssp CBCTTTCCBCCSCCEEETTEEECTTT
T ss_pred HHHHHhchHHHHHHHHHhCCCCCCCC
Confidence 47999999988876667888899887
No 41
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=30.15 E-value=7.8 Score=28.59 Aligned_cols=28 Identities=21% Similarity=0.524 Sum_probs=21.7
Q ss_pred CCCCcccccccccccc----cccCCcchHHHH
Q 007840 335 DDECAICREPMAKAKK----LLCNHLFHLACL 362 (587)
Q Consensus 335 ~~~C~IC~e~~~~~~~----lpC~H~Fh~~Cl 362 (587)
++.|.+|..+|.--.+ -.||++||..|.
T Consensus 13 ~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~ 44 (72)
T d1dvpa2 13 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCT 44 (72)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTS
T ss_pred CCccccCCCcccCccccccccccCCeeChhhh
Confidence 4579999999875322 379999999885
No 42
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=29.48 E-value=1.1 Score=33.29 Aligned_cols=41 Identities=24% Similarity=0.476 Sum_probs=25.8
Q ss_pred CCCcccccccccccccccCCcchHHHHHHHHHhCCCCCCCCcCcCccccc
Q 007840 336 DECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV 385 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~lpC~H~Fh~~Cl~~wl~~~~~~~~~CP~CR~~l~~ 385 (587)
..||.|..+++... ||.+|..|-...-. ...||.|.+++..
T Consensus 3 ~~CP~C~~eL~~~~----~~~~C~~C~~~~~~-----~a~CPdC~~~Le~ 43 (71)
T d2jnea1 3 LHCPQCQHVLDQDN----GHARCRSCGEFIEM-----KALCPDCHQPLQV 43 (71)
T ss_dssp CBCSSSCSBEEEET----TEEEETTTCCEEEE-----EEECTTTCSBCEE
T ss_pred CcCCCccCcccccC----CCEehhhhhhhhee-----EEeCCccccHHHH
Confidence 47999998876521 44455555333222 3689999998753
No 43
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.41 E-value=11 Score=27.22 Aligned_cols=28 Identities=21% Similarity=0.519 Sum_probs=21.5
Q ss_pred CCCCcccccccccccc----cccCCcchHHHH
Q 007840 335 DDECAICREPMAKAKK----LLCNHLFHLACL 362 (587)
Q Consensus 335 ~~~C~IC~e~~~~~~~----lpC~H~Fh~~Cl 362 (587)
++.|.+|...|..-.+ -.||.+||..|.
T Consensus 5 ~~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs 36 (67)
T d1vfya_ 5 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHS 36 (67)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGS
T ss_pred CcccccCCCcccCcccccccccCCCEeccccc
Confidence 3579999999865322 379999999995
No 44
>d1x6aa1 g.39.1.3 (A:8-41) Lim domain kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.62 E-value=13 Score=23.23 Aligned_cols=28 Identities=18% Similarity=0.399 Sum_probs=23.4
Q ss_pred CCCCCcccccccccccccccCCcchHHH
Q 007840 334 YDDECAICREPMAKAKKLLCNHLFHLAC 361 (587)
Q Consensus 334 ~~~~C~IC~e~~~~~~~lpC~H~Fh~~C 361 (587)
.++.|-.|-+-+.-++...=.|-||.+|
T Consensus 7 fge~C~~C~~~itGpvMvAG~~K~HPEC 34 (34)
T d1x6aa1 7 FGEFCHGCSLLMTGPFMVAGEFKYHPEC 34 (34)
T ss_dssp SSCBCTTTCCBCCSCCBCCTTCCBCTTS
T ss_pred HHHHhhhhHhhcccceeeecccccCCCC
Confidence 4668999999888777777789999887
No 45
>d2d8ya1 g.39.1.3 (A:9-43) Eplin, LIMA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.50 E-value=9.9 Score=24.17 Aligned_cols=27 Identities=26% Similarity=0.840 Sum_probs=20.3
Q ss_pred CCCCccccccccccccccc-CCcchHHH
Q 007840 335 DDECAICREPMAKAKKLLC-NHLFHLAC 361 (587)
Q Consensus 335 ~~~C~IC~e~~~~~~~lpC-~H~Fh~~C 361 (587)
.+.|..|-...-...++.+ |+.||+.|
T Consensus 7 ~~kC~~C~K~VY~~E~~~a~g~~~Hk~C 34 (35)
T d2d8ya1 7 RETCVECQKTVYPMERLLANQQVFHISC 34 (35)
T ss_dssp SCBCTTTCCBCCTTSEEECSSSEEETTT
T ss_pred CcccccCCCEEeeeeeEecCCeehhhcc
Confidence 4579999887666666654 58899988
No 46
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.30 E-value=14 Score=26.38 Aligned_cols=27 Identities=19% Similarity=0.624 Sum_probs=21.3
Q ss_pred CCCcccccccccccc----cccCCcchHHHH
Q 007840 336 DECAICREPMAKAKK----LLCNHLFHLACL 362 (587)
Q Consensus 336 ~~C~IC~e~~~~~~~----lpC~H~Fh~~Cl 362 (587)
..|.+|..+|....+ -.||++||..|.
T Consensus 9 ~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs 39 (64)
T d1joca1 9 QNCMACGKGFSVTVRRHHCRQCGNIFCAECS 39 (64)
T ss_dssp CBCTTTCCBCCSSSCCEECTTTCCEECGGGS
T ss_pred CcCcCcCCcccCCccccchhhhCCeeccccc
Confidence 479999999875432 379999999995
No 47
>d1v6ga1 g.39.1.3 (A:1-41) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.23 E-value=9.5 Score=25.08 Aligned_cols=29 Identities=17% Similarity=0.421 Sum_probs=22.3
Q ss_pred cCCCCCcccccccccccccccCCcchHHH
Q 007840 333 AYDDECAICREPMAKAKKLLCNHLFHLAC 361 (587)
Q Consensus 333 ~~~~~C~IC~e~~~~~~~lpC~H~Fh~~C 361 (587)
.....|..|-+-++-++...=+|.||..|
T Consensus 13 ~fG~~C~~C~~~ItG~V~~Ag~~~yHP~C 41 (41)
T d1v6ga1 13 LYGTRCFSCDQFIEGEVVSALGKTYHPDC 41 (41)
T ss_dssp SCCCBCTTTCCBCCSCCEEETTEEECTTT
T ss_pred HhCcccccccCEeeeeeeEecCcccCCCC
Confidence 35678999999886665555668899887
Done!