BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007844
(587 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 286/626 (45%), Positives = 367/626 (58%), Gaps = 78/626 (12%)
Query: 1 MMHHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
M HH + R P+ L V+FR+VC ++GGLIGRSGS IS IRRDT C +HC
Sbjct: 1 MQHHRDRRRRPRPTRPPVMLQPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHC 60
Query: 61 EGGFPGSDHRVILVVGSGSIDRRIMF----CENDVVVEGGE---VSSTQEAVIRVFERMW 113
+ GSDHRVI +VG S +RI C + E E VS QEAVIRV ERMW
Sbjct: 61 DEQVQGSDHRVITIVGPASPGKRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMW 120
Query: 114 EVEAEVEGDGDGDDVA--------YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
EV+ + E G D+ + YCGLLA+TT+IG VVGKGG+NV RMR ESGA I L
Sbjct: 121 EVDGQRERRGGVDNNSNNSGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFL 180
Query: 166 PPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSD 225
PPP CA+ DDQLIQITG+ LAVKKALVAVT CL EK P RP+E+ + SSD
Sbjct: 181 PPPHCASKDDQLIQITGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSD 240
Query: 226 PHREFFPHL-SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWT 284
PH EFFPHL SL+PPL+GN + H S+DA D P D + + EV+ R+L S
Sbjct: 241 PHAEFFPHLSSLLPPLSGNSGTS----HPLSSDAGED-PNQDAEAVRHEVSFRLLCSNGA 295
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVF 344
A IIGK+G IVR+LQN +GA I FAAP++ SGERVVTISALE L++ HSP QNAA+LVF
Sbjct: 296 AGSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNAAILVF 355
Query: 345 ARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV--SEMEDVTGTDIKLV 402
ARSVE + ++G SG +G V +LV +D V CL G + SEM +V+G DI+++
Sbjct: 356 ARSVEHDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRIL 415
Query: 403 GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGG 462
GEQ++ CA+++DVVI+I+GEYKNVQNAL V G+LR
Sbjct: 416 DGEQIMACASEDDVVIEITGEYKNVQNALFMVTGKLR----------------------- 452
Query: 463 PALHKLHQSVALSPEFEQETIAVQGVDQFVL-------PLNRSQTLQTEGRRHATPTTDG 515
LSP+ +QET + ++Q L R Q+ Q R H T +
Sbjct: 453 ----------GLSPDSDQETSLTRAMNQLGFSSSFNNASLPRLQSAQKFQREHTTAIKNQ 502
Query: 516 KPGSRMFEGSLELEKSLVHLLPTDMVDEVGPRSCSDGMTTASG--------------EDN 561
+ + F G LE+SL LLP ++++EVG RS S G+ + +D
Sbjct: 503 ENSLQAFGGGSGLERSLHFLLPKEVLNEVGERSSSGGVRQTTSSGSHSSSGLAPGPIQDT 562
Query: 562 MLTEGVSQLGLSDNIIGPS-TLQLPK 586
LT G++Q LS+NI PS L +P+
Sbjct: 563 SLTRGINQPQLSNNIDFPSPALHMPQ 588
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 348 bits (894), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 285/448 (63%), Gaps = 15/448 (3%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
SSKR LP + +FRLVC VGGLIG SGSI+S +RR+T C+IHCE ++ R
Sbjct: 28 SSKRPVFKVLPGQI-AFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDR 86
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGDGDGDDV 128
VILV+GS S + ++ + V EVSS QEAV+RVFER+W++EAE V + +
Sbjct: 87 VILVIGSLSPRKGLLLGDGGEV----EVSSAQEAVVRVFERVWDLEAEKGVNSNRAVNGE 142
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVK 188
+ LLA+T++IG VVGKGG+N+T +R +GAKI + PPP CA D++L+QITG LAVK
Sbjct: 143 VFSKLLAHTSQIGAVVGKGGKNITAIRNNTGAKIRVFPPPQCATKDEELVQITGGILAVK 202
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL-SLVPPLTGNPSDN 247
KAL++V+ CLQ + K P+ + P SSDP+ E FPHL SL+ + G
Sbjct: 203 KALISVSHCLQDCPPLCKVPVTSSTPTVSSSDRLSSDPNAELFPHLNSLLTSMEG----- 257
Query: 248 ASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
+ + +++ + D KG + EV R+L S A +IGKRGAIVR+L++ +GA I
Sbjct: 258 -LSIYERTTNSN-ETSNRDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASI 315
Query: 308 SFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA 367
FAAPL++ ER+VTISA+E L++ +SP Q+A +LVFAR +E +GF + V
Sbjct: 316 IFAAPLSEHAERIVTISAVESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVT 375
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
+LV V C +G+ +SE+ +VTG DI+++ GE V A+ DVV+QI+GEY+ V
Sbjct: 376 ARLLVATSTVNCFSGNEGQVISELREVTGADIQILHGESVPNGASDEDVVVQITGEYRCV 435
Query: 428 QNALSEVVGRLRHNLKSGEILNEARPRS 455
QNAL ++ R+R NL E++ EARP+S
Sbjct: 436 QNALYKITSRIRDNLSPNEVVAEARPKS 463
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 223/567 (39%), Positives = 320/567 (56%), Gaps = 49/567 (8%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V+FRL+C +GG+IG+SG I+ ++ DT RI E SDHRVILV+ S++RRI
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ E E S+ QEAV+RVFER+ EV A V+G G V C LLA T+++G V+
Sbjct: 111 ALQGSS---EEVEASAAQEAVLRVFERILEVAAVVDGVPPGG-VVSCRLLAETSQVGSVI 166
Query: 145 GKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
GKGG+ V ++R ESG+KI +L P CAA D++++I G LAVKKALVAV+ LQ
Sbjct: 167 GKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVSRRLQDC 226
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHREFFPHL-SLVPPLTGNPSDNASEFHSSSADADR 260
++K+ + RP+E V + DP + F S++PP+ N AS S + +R
Sbjct: 227 PNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTER 286
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERV 320
LD K +QEV ++L S G+IGK G IV++LQN +GA IS AP+ + ER+
Sbjct: 287 IS-TLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERL 345
Query: 321 VTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCL 380
+TI+A E ++R+SP QN +LVF RS+E ++G SG +KG V+ ++V ++ VGCL
Sbjct: 346 ITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSG-SKGSPVSARLVVPSNQVGCL 404
Query: 381 TGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRH 440
G G + +SEM +G I+++G +QV CA++ND V+QISGE+ NVQ+ L + GRLR
Sbjct: 405 MGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRD 464
Query: 441 NLKSGEILNEARPR--------SPSGRVGGPALHKLHQSVALSPEFEQETIAVQGVDQFV 492
NL + LN A R SP GRV PA LH SV +SP F + T Q +D
Sbjct: 465 NLFPSKTLNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLG 524
Query: 493 LPLNRSQTLQTEGRRHATPTTDGKPGSRMFEGSLELEKSLVHLLPTDMVDEVGPRSCSDG 552
L S +L PT+ L P+ V V PR+ G
Sbjct: 525 L----SHSLD-------HPTSP-------------------RLWPSQTVTGVNPRNIKGG 554
Query: 553 MTTASGEDN-MLTEGVSQLGLSDNIIG 578
+ SG + ++T ++ + +N+IG
Sbjct: 555 IELGSGSKSAIITNTTVEIVIPENVIG 581
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 192/433 (44%), Positives = 276/433 (63%), Gaps = 12/433 (2%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++FRLVC +VGGLIG SGSI+S +RR+T C+IHCE ++ RVILV+GS S + +
Sbjct: 50 IAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKGL 109
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGDGDGDDVAYCGLLANTTKIGV 142
+ V EVSS QEA++RVFER+W +EAE V + + + LLA+T++IG
Sbjct: 110 QLGDGGEV----EVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFSKLLAHTSQIGA 165
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
VVGKGG+N+T +R +GAKI + PPP CA D++L+ ITG LAVKKAL++V+ CLQ
Sbjct: 166 VVGKGGKNITAIRNSTGAKIRVCPPPQCATKDEELVLITGGILAVKKALISVSHCLQDCP 225
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDH 262
+ K P+ + P F +SSDP+ E FP L+ + LT + E ++S ++
Sbjct: 226 PLCKVPVSSSIPTVSSFDRSSSDPNAELFPRLNSL--LTSMEGLSIYERTTNSNESSNR- 282
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
D KG + EV R+L S A +IGKRGAIVR+L++ +GA I FAAPL++ ER+VT
Sbjct: 283 ---DSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVT 339
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
ISA+E L++ +SP Q+A +LVFAR +E +GF + V +LV V +G
Sbjct: 340 ISAIESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSG 399
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ + E+ +VTG DI+++ GE V A+ +DVV+QI+GEY+ VQNAL ++ R+R NL
Sbjct: 400 NEGQVILELREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNL 459
Query: 443 KSGEILNEARPRS 455
E + EARP+S
Sbjct: 460 SPNEAVTEARPKS 472
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 288/478 (60%), Gaps = 34/478 (7%)
Query: 12 SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRV 71
SKRR +++ D + R+VC V+GG+IG +G ++S +RR+T +IHCE GSDH V
Sbjct: 12 SKRRPVIHVLPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWV 71
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGE--------VSSTQEAVIRVFERMWEVEAEVEGDG 123
+ +VGS ++++ ++ + GGE VS+ Q A+IRV ER W V A +G G
Sbjct: 72 VFIVGSTAVNKSVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGG 131
Query: 124 --DGDDV-AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQI 180
DG+D AYCG+LA+ +IG V+G GG+NV MR SGA I +LPPP C D+LIQI
Sbjct: 132 VVDGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPPPICGTNTDELIQI 191
Query: 181 TGATLAVKKALVAVTTCLQHLSTME--KSPICFNRPIEKVFYSNSSDPHREFFPHL-SLV 237
TG LAVKKALV V+TC+Q + P+C + E NS DPH EFFP+L S V
Sbjct: 192 TGDVLAVKKALVMVSTCIQDNPPVNGYPQPLCI-KAYESSTDGNSEDPHSEFFPNLRSSV 250
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGL--DKKGRKQEVALRMLFSGWTASGIIGKRGAI 295
P N SD+AS ++R P + + G +++V +++F+ A GIIGK+G I
Sbjct: 251 P----NASDSAS--------SNRHLPAVYDEGNGTERKVVFKIIFTSVVAGGIIGKQGTI 298
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
+R+LQN +GA IS APL SGERVVTISA E L++R+S QNA LVFARSVE++ ++G
Sbjct: 299 IRALQNETGASISIGAPLKVSGERVVTISARENLESRYSHAQNALALVFARSVEIDVEKG 358
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
G + G V +LV + F L G+G+ E TG D+ + Q+L ++N+
Sbjct: 359 LRPGLHNGAVVKTKLLVPSQFANSLVGNGN---REAIIATGADVHIPVDNQILEWISENE 415
Query: 416 VVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR--SPSGRVGGPALHKLHQS 471
VVI+I GEY +VQ AL+ V +LR NL ++L E R R +P G ++ L QS
Sbjct: 416 VVIEIKGEYGHVQKALTHVSSKLRENLLPKKVLGEMRARVSNPYESAGTSQIYNLKQS 473
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 224/585 (38%), Positives = 319/585 (54%), Gaps = 63/585 (10%)
Query: 12 SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRV 71
SKRR +++ D + R+VC V+GG+IG +G ++S +RR+T +IHCE GSDH V
Sbjct: 12 SKRRPVIHVLPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWV 71
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGE--------VSSTQEAVIRVFERMWEVEAEVEGDG 123
+ +VGS ++++ I+ + GGE VS+ Q A+IRV ER W V A +G G
Sbjct: 72 VFIVGSTAVNQSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGG 131
Query: 124 --DGDDV-AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQI 180
DG+D AYCG+LA+ +IG V+G GG+NV MR SGA I +LPPP C +D+LIQI
Sbjct: 132 VVDGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPICGTKNDELIQI 191
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYS------NSSDPHREFFPHL 234
TG LAVKKALV V++ +Q+ + + P P+ Y NS DPH EFFP+L
Sbjct: 192 TGDVLAVKKALVMVSSYIQNNAPLNGYP----PPLSIKGYESLSTDGNSEDPHSEFFPNL 247
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
+ NA+E +S +R P +++V +++F+ A GIIGK+G
Sbjct: 248 R------SSSLSNATEIVAS----NRHLPYDGGNSTERKVVFKIIFTSVVAGGIIGKQGT 297
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
I+R+LQN +GA IS APL SGERVVT+SA E L++R+S QNA LVFARSVE++ ++
Sbjct: 298 IIRALQNETGASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVEIDVEK 357
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
G G + G V +LV + F G+G+ E TG D+ + G QVL ++N
Sbjct: 358 GLRPGLHNGAIVKTKLLVPSHFANSFNGNGN---REAIIATGADVHISVGNQVLEWISEN 414
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR--SPSGRVGGPALHKLHQSV 472
+VVI+I GEY +VQ AL+ V +LR NL ++L E R R +P GG + Q
Sbjct: 415 EVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGEMRARVSNPYESAGGRS-----QIY 469
Query: 473 ALSPEFEQETIAVQGVDQFVLPLNRSQTLQTEGRRHATPTTDGKPGSRMFEGSLELEK-- 530
L P + P N S Q R + + P +M E+ K
Sbjct: 470 NLQPSQQ--------------PSN-SIKPQDASRGDSLSVSAAVPDLKMVRSGAEVLKSN 514
Query: 531 SLVHLLPTDMVDEVGPRSCSDGMTTASGEDNMLTEGVSQLGLSDN 575
S++H VDE+ + + ED LT+G+ QL +S N
Sbjct: 515 SVMHTEVLKEVDELNDFTLPQSLLE---ED--LTQGMKQLQMSSN 554
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/470 (42%), Positives = 279/470 (59%), Gaps = 36/470 (7%)
Query: 12 SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRV 71
SKRR +++ D + R+VC V+GG+IG +G ++S +RR+T +IHCE GSDH V
Sbjct: 12 SKRRPVIHVLPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWV 71
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGE--------VSSTQEAVIRVFERMWEVEAEVEGDG 123
+ +VGS ++++ I+ + GGE VS+ Q A+IRV ER W V A +G G
Sbjct: 72 VFIVGSTAVNQSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGG 131
Query: 124 --DGDDV-AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQI 180
DG+D AYCG+LA+ +IG V+G GG+NV MR SGA I +LPPP C +D+LIQI
Sbjct: 132 VVDGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPPPICGTKNDELIQI 191
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYS------NSSDPHREFFPHL 234
TG LAVKKALV V++ +Q+ + + P P+ Y NS DPH EFFP+L
Sbjct: 192 TGDVLAVKKALVMVSSYIQNNAPLNGYP----PPLSIKGYESLSTDGNSEDPHSEFFPNL 247
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
+ NA+E +S +R P +++V +++F+ A GIIGK+G
Sbjct: 248 R------SSSLSNATEIVAS----NRHLPYDGGNSTERKVVFKIIFTSVVAGGIIGKQGT 297
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
I+R+LQN +GA IS APL SGERVVT+SA E L++R+S QNA LVFARSVE++ ++
Sbjct: 298 IIRALQNETGASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVEIDVEK 357
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
G G + G V +LV + F G+G+ E TG D+ + G QVL ++N
Sbjct: 358 GLRPGLHNGAIVKTKLLVPSHFANSFNGNGN---REAIIATGADVHISVGNQVLEWISEN 414
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR--SPSGRVGG 462
+VVI+I GEY +VQ AL+ V +LR NL ++L E R R +P GG
Sbjct: 415 EVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVLGEMRARVSNPYESAGG 464
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/410 (46%), Positives = 258/410 (62%), Gaps = 26/410 (6%)
Query: 15 RGPL-NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
R PL L V+FR+VC +G LIG SGS+IS IR +T C +HCE GS+HR I+
Sbjct: 15 RQPLIELQPGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIV 74
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
V GS S +R+I E++ V EVS+ QEAV+RV ERMWEV+A +G GD YCGL
Sbjct: 75 VAGSASPERKIAVGEDETV----EVSAAQEAVVRVLERMWEVDAVKDG---GDCEGYCGL 127
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGA-TLAVKKALV 192
LANT++IG VVG+ GRN+ RM+ SGA I +LP P CA +DQLIQITG+ T+AVKKA++
Sbjct: 128 LANTSQIGAVVGREGRNIKRMKRASGAHIWILPAPLCALKEDQLIQITGSSTVAVKKAVI 187
Query: 193 AVTTCLQHLSTMEKSPICFN-RPIEKVFYSNSSDPHREFFPHL-SLVPPLTGNPSDNASE 250
A+T+CLQ EK + + + + +S DPH EFFPHL SL+P + N +
Sbjct: 188 AITSCLQDCPPYEKDEVDLSLEAVRRRRSGSSGDPHAEFFPHLCSLLPTYSENIA----- 242
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
D+DH K + +V RM+ A IIGK G++VR+LQN +GA I A
Sbjct: 243 -------TDKDH---KKPNEQLQVQFRMICPHGAAGSIIGKGGSVVRALQNQTGASIILA 292
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
P+T S R+VT+SALE L++ HSP QNA +LVFARS+E + ++ S G + V ++
Sbjct: 293 PPITNSDGRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATL 352
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQI 420
L+ ++ V CL G SEM + TG DI+++ G+Q CA+ NDVV+Q+
Sbjct: 353 LLPSNRVSCLIERGGRIDSEMIETTGADIQILQGDQFFYCASNNDVVLQV 402
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 188/457 (41%), Positives = 277/457 (60%), Gaps = 27/457 (5%)
Query: 3 HHSNPYGYSSKRRGP-LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE 61
HH P + R+ P L ++FRLVC + VGGLIG SGSI+S +RR+T C+IHCE
Sbjct: 16 HHPQPPLKRNNRKRPVFKLLPGQIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCE 75
Query: 62 GGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
G+D RVILV+GS S + I+ + ++ EVS+ QE V+RVF+R+W +E+E G
Sbjct: 76 DAVVGTDDRVILVIGSMSDRKGIVLGDREM-----EVSNAQEGVVRVFDRVWGLESEKGG 130
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+G+ Y LLA+++++G +VGKGG+N++ +R SG+ I + P P CAA D++LI IT
Sbjct: 131 NGE----VYGKLLAHSSQVGAIVGKGGKNISNIRNNSGSNIRVCPAPHCAAKDEELILIT 186
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSD-----PHREFFPHL-S 235
G +LAVKKAL+ V+ CLQ M K + N P NSSD H + FPHL S
Sbjct: 187 GESLAVKKALIYVSYCLQDCPPMGK--VSLNTPPTI----NSSDRSTSYTHEDLFPHLNS 240
Query: 236 LVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAI 295
+P + G ++AS+ +++A+ + LD KG V R+L S A +IGK+G+I
Sbjct: 241 WLPSMEGLSINDASK-QTTNANGNSS---LDSKGSGHAVVFRLLCSNNVAGSVIGKKGSI 296
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
VR+ + +GA I FA PL + ER+VTISA E L++ +SP Q+A +LVF R E + G
Sbjct: 297 VRTFEIRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTRIAEDHIRNG 356
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
F V +L+ + LTG+ +SE+ V+G DI+L+ GE + A+ ND
Sbjct: 357 FQPATAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGEPIPN-ASDND 415
Query: 416 VVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEAR 452
VV+QI+G Y+ V+NAL ++ +R N + E+L EA+
Sbjct: 416 VVVQITGGYRCVENALRKITSIIRDNPLTNELLAEAK 452
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/440 (40%), Positives = 263/440 (59%), Gaps = 27/440 (6%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V+FRL+C +GG+IG+SGS+I ++++ T +I E S RVILV+ ++ ++
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKV 104
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ +VV EVS QEA+++VF+R+ EV AE+EG GD V C L+A++ + G V+
Sbjct: 105 LLRNEEVV----EVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAGSVI 160
Query: 145 GKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
GKGG+ V R++ E+G KI +L P CA+ D++I+I G +VKKALVAV+ LQ
Sbjct: 161 GKGGKVVERIKKETGCKIRVLTDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQDCP 220
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPH-----LSLVPPLTGN-------------- 243
++ + + N+P E V Y RE L++VP T +
Sbjct: 221 SVNRIKMMGNKPYEIVQYETLDALPREILTAAPRGTLTVVPHETVDHLLLRSSALSTLSS 280
Query: 244 -PSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA 302
+ A+ HS SA+ +R L+ K +QEV+ R+L S G+IGK G IVR+LQ+
Sbjct: 281 SSNSYATRVHSLSAEVNRVS-SLEPKALQQEVSFRILCSNDRVGGVIGKGGNIVRALQSE 339
Query: 303 SGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
+GA IS + + +R++TI+A E ++R+SP Q AAVLVF+RS+EV ++ SG NK
Sbjct: 340 TGATISIGPLVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNK 399
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
G V V ++V + VGCL G G VSE+ TG +I+++G +QV CA+ ND V+QISG
Sbjct: 400 GSTVTVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISG 459
Query: 423 EYKNVQNALSEVVGRLRHNL 442
E+ +VQ+AL GRLR NL
Sbjct: 460 EFSSVQDALYNATGRLRDNL 479
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/445 (40%), Positives = 270/445 (60%), Gaps = 13/445 (2%)
Query: 12 SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRV 71
SK+ PL +P V+FR++C +GG+IG+SG +I +++ T +I E S RV
Sbjct: 40 SKQPPPLIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRV 99
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGEV--SSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
+ V+GS ++ R+ F E + G EV S QE +++VFER+ EV AE+EG G +V
Sbjct: 100 VTVIGSPALTSRV-FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVG 158
Query: 130 --YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATL 185
YC LLA+ ++G V+GKGG+ V ++R ESG +I +L PACA D++I+I G
Sbjct: 159 VVYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVW 218
Query: 186 AVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE-FFPHLSLVPPLTGNP 244
A+KKAL+AV+ LQ EK + RP E V + D H + S++P L +
Sbjct: 219 AIKKALLAVSRRLQDCPPSEKRTV---RPAEAVIHETLPDLHMDHILQRNSVLPILPSSS 275
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
+ AS HS S DAD P +D +Q+V ++L + G+IGK G IVR+LQN SG
Sbjct: 276 NIFASGIHSLSIDADM-LPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESG 334
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
A +S +T ER+++I+A E +++R+SP Q A VLVF+RSV+V ++ + +KG
Sbjct: 335 ATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEK-WQESSSKGS 393
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY 424
V ++V ++ VGC+ G G +SE+ VTGT+I+++ +QV CAA++D ++QISGE+
Sbjct: 394 PVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEF 453
Query: 425 KNVQNALSEVVGRLRHNLKSGEILN 449
NVQ+AL V GRLR NL S + N
Sbjct: 454 SNVQDALYNVTGRLRDNLFSSVLSN 478
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 178/438 (40%), Positives = 267/438 (60%), Gaps = 13/438 (2%)
Query: 12 SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRV 71
SK+ PL +P V+FR++C +GG+IG+SG +I +++ T +I E S RV
Sbjct: 45 SKQPPPLIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRV 104
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGEV--SSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
+ V+GS ++ R+ F E + G EV S QE +++VFER+ EV AE+EG G +V
Sbjct: 105 VTVIGSPALTSRV-FLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVG 163
Query: 130 --YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATL 185
YC LLA+ ++G V+GKGG+ V ++R ESG +I +L PACA D++I+I G
Sbjct: 164 VVYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVW 223
Query: 186 AVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE-FFPHLSLVPPLTGNP 244
A+KKAL+AV+ LQ EK + RP E V + D H + S++P L +
Sbjct: 224 AIKKALLAVSRRLQDCPPSEKRTV---RPAEAVIHETLPDLHMDHILQRNSVLPILPSSS 280
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
+ AS HS S DAD P +D +Q+V ++L + G+IGK G IVR+LQN SG
Sbjct: 281 NIFASGIHSLSIDADM-LPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESG 339
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
A +S +T ER+++I+A E +++R+SP Q A VLVF+RSV+V ++ + +KG
Sbjct: 340 ATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEK-WQESSSKGS 398
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY 424
V ++V ++ VGC+ G G +SE+ VTGT+I+++ +QV CAA++D ++QISGE+
Sbjct: 399 PVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEF 458
Query: 425 KNVQNALSEVVGRLRHNL 442
NVQ+AL V GRLR NL
Sbjct: 459 SNVQDALYNVTGRLRDNL 476
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/485 (35%), Positives = 270/485 (55%), Gaps = 44/485 (9%)
Query: 6 NPYGYSSKRRG--------PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
NP+ S +R PL +P V+FRL+C + +GG+IG+SG++I +++ T +
Sbjct: 21 NPFPNGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAK 80
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I E S RVI+V+G+ +ID ++M + E EVS QEA++RVF+R+ EV A
Sbjct: 81 IRIEDSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAA 140
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDD 175
E+EG GD C L+A++ + G V+GKGG+ V +++ ++G KI + PAC + D
Sbjct: 141 EMEGIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPD 200
Query: 176 QLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSN---------SSDP 226
++I+I G+ +VKKALVAV+ LQ +++ + E + + S P
Sbjct: 201 EVIEIEGSVSSVKKALVAVSRNLQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVP 260
Query: 227 HREFF--------------------PHL----SLVPPLTGNPSDNASEFHSSSADADRDH 262
F HL S + L + + A+ HS SA+ +R
Sbjct: 261 RETFIGAPRETLTAVPCETLTDLHVDHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVS 320
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
L+ K +QE+ +++ S G+IGK G I+R+LQ+ +GA +S + + +R++T
Sbjct: 321 -SLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLIT 379
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I+A E ++R+SP Q A VLVF+RSVE ++G SG N G +V ++V ++ VGCL G
Sbjct: 380 ITASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLG 439
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G VSEM TG I++VG ++V CA+ ND V+QISGE+ NVQ+AL GRLR NL
Sbjct: 440 KGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNL 499
Query: 443 KSGEI 447
G +
Sbjct: 500 FGGTL 504
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 165/429 (38%), Positives = 245/429 (57%), Gaps = 25/429 (5%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V+FRL+C VG +IG+SG +I +++ T +I E P S RVILV +
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAA----- 79
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
GEVS+ Q A+++VF+R+ +V AE G GD V C LLA+T+++G V+
Sbjct: 80 --------ASDGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQVGAVI 131
Query: 145 GKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
GK G+ V ++R+++G KI +L PAC A D+++++ G +VKKALVAV+ CLQ
Sbjct: 132 GKAGKVVEKIRMDTGCKIRVLNEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCP 191
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREF--------FPHLSLVPPLTGNPSDNASEFHSS 254
+++ + +R E V S P S + L+ + NAS
Sbjct: 192 PPDRTKMTGSRHYEVVRSETCSVPLESLTNLHIDRRLQRSSTLSTLSNRSNGNASGAPKL 251
Query: 255 SADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT 314
SA+ +R LD K +QEV R++ S +IGK G+IVR+LQN SGA+ISF L
Sbjct: 252 SAEVNRVS-ALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLV 310
Query: 315 KSGERVVTISALEY-LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
+ +R+VTI+A E ++R+SP Q A VLVF++SVE ++G G K V ++V
Sbjct: 311 ECEDRLVTITASEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVP 370
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
++ VGCL G G + VSEM TG +I+++G ++V C + ND ++QISGE+ NVQ A+
Sbjct: 371 SNQVGCLLGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYN 430
Query: 434 VVGRLRHNL 442
GRLR NL
Sbjct: 431 ATGRLRDNL 439
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH 59
D VVS RL+ T VG +IG++G ++ IR DT C+I
Sbjct: 113 DRVVSCRLLADTSQVGAVIGKAGKVVEKIRMDTGCKIR 150
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/453 (37%), Positives = 254/453 (56%), Gaps = 45/453 (9%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V+FRL+C +GG+IG+SGS+I ++++ T +I E R+ILV+ ++ +I
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-----GDDVAYCGLLANTTK 139
+ +V+ EVS QEA+++VF+R+ G GD GD V C L+A+ +
Sbjct: 105 LLRNEEVI----EVSKAQEALLKVFDRILR-----SGGGDRSVDVGDRVMSCRLVADAAQ 155
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G V+GKGG+ V R++ E+G KI +L P CA+ D++I+I G +VKKALVAV+
Sbjct: 156 AGSVIGKGGKVVERIKKETGCKIRVLTDDLPLCASASDEIIEIEGRVSSVKKALVAVSQR 215
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF---FPHLSLVPPLTGNPS--------- 245
LQ ++++ + ++P E V Y R P ++L G +
Sbjct: 216 LQDCHPVDRTKMMGSKPYEIVQYEALDALPRATSTAAPRVTLTAAPRGTLTAVQHETVDH 275
Query: 246 ----------------DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGII 289
A+ HS + +R L+ K KQEV R+L S G+I
Sbjct: 276 LLLRSSALSTLSSSSNSYATRIHSLPTEVNRVS-SLEPKALKQEVTFRILCSNDRVGGVI 334
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
GK G IVR+LQ+ +GA IS + + +R++TI+A E ++R+SP Q AAVLVF+RS+E
Sbjct: 335 GKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENPESRYSPAQKAAVLVFSRSIE 394
Query: 350 VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG 409
V ++G SG NKG V V ++V + VGCL G G VSEM TG +I+++G +QV
Sbjct: 395 VGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPK 454
Query: 410 CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
CA+ ND V+QISGE+ +VQ+AL +GRLR NL
Sbjct: 455 CASDNDQVVQISGEFSSVQDALYNAMGRLRDNL 487
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 260/472 (55%), Gaps = 41/472 (8%)
Query: 7 PYGYSSKRR---------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
P G S+ +R PL +P VSFRL+C +GG+IG++G+II +++ T +
Sbjct: 9 PNGSSANKRSKPQPSASAAPLPVPSGHVSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAK 68
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+ E S RVI V+G + ++F + VE VS QEA++RVFER+ EV A
Sbjct: 69 VRIEDAPSDSPDRVITVIGPIT-QSAVVFSRIESAVE---VSKGQEALVRVFERILEVAA 124
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML--PPPACAAIDD 175
E + DG V C +LA + +G V+GKGG+ V ++R + G +I +L P CAA ++
Sbjct: 125 ESDSVADG--VVSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKVLVDKLPDCAASNE 182
Query: 176 QLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP-HL 234
++I+I G AVKK LVAV+ CLQ ++K+ + ++P E V + SD E P H
Sbjct: 183 EMIEIEGDVSAVKKGLVAVSRCLQDCQPVDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHS 242
Query: 235 SLVPPLTGNPS--------------------DNASEFHSSSADADRDHPGLDKKGRKQEV 274
+++P + N S + AS H S ++DR Q++
Sbjct: 243 AVLPTIAQNSSVLPTIPQHSLGLPTIPKSSINYASRVHPLSLESDRVV--TPDTNIPQQL 300
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHS 334
R+L + G+IGK G IVR+LQN +GA IS +++ ER++T++A E ++R+S
Sbjct: 301 VFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPESRYS 360
Query: 335 PVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
Q VLVF+R+VE ++G G ++G V ++V VGCL G G + +SEM
Sbjct: 361 AAQKTIVLVFSRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKA 420
Query: 395 TGTDIKLVGGEQV-LGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSG 445
T T I+++ G+Q C + D V++ISG++ NV++A+ V GRLR NL SG
Sbjct: 421 TSTSIRIIVGDQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDNLFSG 472
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 252/464 (54%), Gaps = 48/464 (10%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
PL LP VSFRL+C +GG+IG+SG+II +++ + +I E S RVI V+
Sbjct: 47 APLPLPPGHVSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVI 106
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG---DGDGDDVAYCG 132
G I ++ +V +VS QE +IRVFER+ EV AE +G G V C
Sbjct: 107 AEGQIVSKVRVESEEV-----DVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCR 161
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKA 190
+LA + + G V+GKGG+ V ++R + G KI +L P CA ++++I+I G L+VKKA
Sbjct: 162 MLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRVLTDKLPVCAGPNEEMIEIEGDILSVKKA 221
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-LVPPLTGNPSDNAS 249
L+AV+ CLQ ++K + ++ E V + E P + +VP + N A
Sbjct: 222 LIAVSRCLQDCQPVDKPRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSCAP 281
Query: 250 EFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
H+ + DR P LD K +QEV ++L G+IGK G I+++LQN +GA I+
Sbjct: 282 VPHNFLLETDR-VPSLDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITI 340
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A + +S ER++T+ A E ++R+S Q A VLVF+R
Sbjct: 341 GATIAESDERLITVIASENPESRYSAAQKAVVLVFSR----------------------- 377
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V ++ VGCL G G +S+M TGT IK++ G+Q+ C +N+ V+QISG++ NV++
Sbjct: 378 LVVPSNQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKD 437
Query: 430 ALSEVVGRLRHNL----------KSGEILNEARPRSPSGRVGGP 463
A+ V GRLR NL +S ++ EA SP GR+ P
Sbjct: 438 AVYHVTGRLRDNLFSSALSTPVTRSTTVITEA---SPYGRLKEP 478
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 173/476 (36%), Positives = 257/476 (53%), Gaps = 44/476 (9%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FRL+C +G IG+SGS+I S+++ T RI + RVI+V+ + + D
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGD--- 76
Query: 85 MFCENDVVVEGGEVS-STQEAVIRVFERMWEVEA-EVEGDGDGDDVAYCGLLANTTKIGV 142
G+VS + QEA+++VFER+ +V A E +G+G GD V C LL N + G
Sbjct: 77 -----------GDVSLNPQEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGG 125
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
V+GKGG V ++R ++G +I +L PAC D++I+I G +VKKALVAV LQ
Sbjct: 126 VIGKGGMVVAKIRADTGCRIRVLNDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQD 185
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
++++ + RP E S+ PH E L++ L + + + S S+ + +
Sbjct: 186 CPPLDRTKMMGTRPYEAFQNETSAVPH-EGLTDLNMDFRLQRSSAISTSSIRSNGVPS-K 243
Query: 261 DHP---------GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
HP LD + KQEV R+L SG ++GK G+IV++LQN +GA IS
Sbjct: 244 SHPLSVEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGP 303
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSIL 371
P+ + +R++TI+ALE ++R SP Q A VLVF RS+E ++ NK +V ++
Sbjct: 304 PVVECEDRLITITALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLV 363
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V ++ VG L G G + VSEM T T I++ +V CA+ ND V+QISGE NV++AL
Sbjct: 364 VPSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDAL 423
Query: 432 SEVVGRLRHNL-----KSGEILNEARPRS--PSGRVG--------GPALHKLHQSV 472
RLR ++ SG RPR P G G GP++H L QS+
Sbjct: 424 YNATRRLRDHIFLIAQNSGGTGPYRRPRDSIPLGLGGQSVVGSNHGPSIHSLSQSM 479
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 230/450 (51%), Gaps = 49/450 (10%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR- 83
V FR++CP GG+IG+ G+II R DT +I + G D RVIL+V +R
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 84 -IMFC-----------------ENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG 125
C N V V+ E S Q+A++RVFER+ +V+ E E
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 126 DDVAY----CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLI 178
+D+ C LLA + ++G V+G+GG+ V ++R ESGA+I +LP PACA+ D+LI
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 179 QITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVP 238
QITG AV+KAL+ V++CLQ + + +P + + N + FP
Sbjct: 236 QITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGS 295
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGR------KQEVALRMLFSGWTASGIIGKR 292
L G ++HS + PG + G ++EV ++L +IGK
Sbjct: 296 SLHG------PDYHSRGYSS---MPGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKG 346
Query: 293 GAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEG 352
G+I+R LQ+ +GA I A S ERVV ISA E L+ +HSP Q+A + V R E+
Sbjct: 347 GSIIRFLQSETGASIKIADAAPDSDERVVVISARENLEQKHSPAQDAVIRVHCRIAEI-- 404
Query: 353 QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
GF G AV +LV + +GCL G G +SEM TG I++ EQV C +
Sbjct: 405 --GFEPGA----AVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGS 458
Query: 413 QNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
QND ++Q+ G ++VQ+AL + R+R +
Sbjct: 459 QNDELVQVIGSLQSVQDALFRITSRIRETI 488
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 124/263 (47%), Gaps = 45/263 (17%)
Query: 3 HHSNPYGYSSKRRGPLNLP-------DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTK 55
+HS GYSS GP N+ ++ V F+L+C VG LIG+ GSII ++ +T
Sbjct: 302 YHSR--GYSSMP-GPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETG 358
Query: 56 CRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV 115
I P SD RV+++ +++++ S Q+AVIRV R+ E+
Sbjct: 359 ASIKIADAAPDSDERVVVISARENLEQK--------------HSPAQDAVIRVHCRIAEI 404
Query: 116 EAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAA 172
E LL ++ +IG ++GKGG ++ MR +GA I + P C +
Sbjct: 405 GFEPGA------AVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGS 458
Query: 173 IDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
+D+L+Q+ G+ +V+ AL +T+ ++ F P++ + + P+ FP
Sbjct: 459 QNDELVQVIGSLQSVQDALFRITSRIRE--------TIF--PLKPSISNVNGPPYMSSFP 508
Query: 233 HLSLVPPLTGNPSDNASEFHSSS 255
+ PP+ D AS H SS
Sbjct: 509 EIP--PPMFRPRHDPASPGHYSS 529
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 221/413 (53%), Gaps = 42/413 (10%)
Query: 176 QLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL- 234
++QI G LAVKKALVAV+ LQ ++K+ + RP+E V + DP + F
Sbjct: 122 NVLQIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRG 181
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
S++PP+ N AS S + +R LD K +QEV ++L S G+IGK G
Sbjct: 182 SVLPPIPSNTISYASGSRPLSINTERIS-TLDPKTSQQEVIFKILCSNDRVGGVIGKGGT 240
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
IV++LQN +GA IS AP+ + ER++TI+A E ++R+SP QN +LVF RS+E ++
Sbjct: 241 IVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEK 300
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
G SG +KG V+ ++V ++ VGCL G G + +SEM +G I+++G +QV CA++N
Sbjct: 301 GLDSG-SKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASEN 359
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR--------SPSGRVGGPALH 466
D V+QISGE+ NVQ+ L + GRLR NL + LN A R SP GRV PA
Sbjct: 360 DQVVQISGEFVNVQDGLYHITGRLRDNLFPSKTLNGAGIRSSSAMNEISPYGRVRDPASF 419
Query: 467 KLHQSVALSPEFEQETIAVQGVDQFVLPLNRSQTLQTEGRRHATPTTDGKPGSRMFEGSL 526
LH SV +SP F + T Q +D L L+ S T R
Sbjct: 420 GLHSSVGVSPSFSRHTTLTQSMDH--LGLSHSLDHPTSPR-------------------- 457
Query: 527 ELEKSLVHLLPTDMVDEVGPRSCSDGMTTASGEDN-MLTEGVSQLGLSDNIIG 578
L P+ V V PR+ G+ SG + ++T ++ + +N+IG
Sbjct: 458 --------LWPSQTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIG 502
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 5 SNPYGYSSKRRGPLNLPDDVVS------------FRLVCPTPVVGGLIGRSGSIISSIRR 52
SN Y+S R PL++ + +S F+++C VGG+IG+ G+I+ +++
Sbjct: 189 SNTISYASGSR-PLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQN 247
Query: 53 DTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERM 112
+ I D R+I + S + + R S Q VI VF R
Sbjct: 248 EAGASISVGAPVAECDERLITITASENPESR--------------YSPAQNGVILVFNRS 293
Query: 113 WE--VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PP 167
E +E ++ G V+ L+ + ++G ++GKGG ++ MR SGA I ++
Sbjct: 294 IEAGIEKGLDSGSKGSPVS-ARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQV 352
Query: 168 PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
P CA+ +DQ++QI+G + V+ L +T L+
Sbjct: 353 PKCASENDQVVQISGEFVNVQDGLYHITGRLR 384
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 231/445 (51%), Gaps = 42/445 (9%)
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+ K + V R S K ++ I +I I G LAVKKALVAV+ LQ
Sbjct: 106 IQKASKLVYTKRCRSKEKFCIIRCEIKRKITLIMIIIEGDVLAVKKALVAVSRRLQDCPN 165
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFPHL-SLVPPLTGNPSDNASEFHSSSADADRDH 262
++K+ + RP+E V + DP + F S++PP+ N AS S + +R
Sbjct: 166 VDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPPIPSNTISYASGSRPLSINTERIS 225
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
LD K +QEV ++L S G+IGK G IV++LQN +GA IS AP+ + ER++T
Sbjct: 226 -TLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLIT 284
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I+A E ++R+SP QN +LVF RS+E ++G SG +KG V+ ++V ++ VGCL G
Sbjct: 285 ITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSG-SKGSPVSARLVVPSNQVGCLMG 343
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G + +SEM +G I+++G +QV CA++ND V+QISGE+ NVQ+ L + GRLR NL
Sbjct: 344 KGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNL 403
Query: 443 KSGEILNEARPR--------SPSGRVGGPALHKLHQSVALSPEFEQETIAVQGVDQFVLP 494
+ LN A R SP GRV PA LH SV +SP F + T Q +D L
Sbjct: 404 FPSKTLNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGL- 462
Query: 495 LNRSQTLQTEGRRHATPTTDGKPGSRMFEGSLELEKSLVHLLPTDMVDEVGPRSCSDGMT 554
S +L PT+ L P+ V V PR+ G+
Sbjct: 463 ---SHSLD-------HPTSP-------------------RLWPSQTVTGVNPRNIKGGIE 493
Query: 555 TASGEDN-MLTEGVSQLGLSDNIIG 578
SG + ++T ++ + +N+IG
Sbjct: 494 LGSGSKSAIITNTTVEIVIPENVIG 518
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 5 SNPYGYSSKRRGPLNLPDDVVS------------FRLVCPTPVVGGLIGRSGSIISSIRR 52
SN Y+S R PL++ + +S F+++C VGG+IG+ G+I+ +++
Sbjct: 205 SNTISYASGSR-PLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQN 263
Query: 53 DTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERM 112
+ I D R+I + S + + R S Q VI VF R
Sbjct: 264 EAGASISVGAPVAECDERLITITASENPESR--------------YSPAQNGVILVFNRS 309
Query: 113 WE--VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PP 167
E +E ++ G V+ L+ + ++G ++GKGG ++ MR SGA I ++
Sbjct: 310 IEAGIEKGLDSGSKGSPVS-ARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQV 368
Query: 168 PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
P CA+ +DQ++QI+G + V+ L +T L+
Sbjct: 369 PKCASENDQVVQISGEFVNVQDGLYHITGRLR 400
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 167/463 (36%), Positives = 255/463 (55%), Gaps = 38/463 (8%)
Query: 9 GYSSKRR---------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH 59
GYS+ +R P +P V FRL+C +GG+IG+ G+II +++ T +I
Sbjct: 33 GYSANKRSKPHPSTSAAPSPVPSGHVLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIR 92
Query: 60 CEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGG----EVSSTQEAVIRVFERMWEV 115
E S RVI +VGS ++ VV G EVS QEA++RVFER+ EV
Sbjct: 93 IEDAPLESPDRVITIVGS--------VTQSSVVFSGIGSAIEVSKGQEALVRVFERILEV 144
Query: 116 EAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML--PPPACAAI 173
AE + G + C LLA + +G V+GKGG+ V ++R + G K+ +L PACA+
Sbjct: 145 AAESDSVAGG--LVSCRLLAEISSVGAVIGKGGKTVEKIRKDCGCKVKVLIDKLPACASS 202
Query: 174 DDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
++++I+I G AVKK LVAV+ LQ ++K+ + ++P+E V + + E P
Sbjct: 203 NEEMIEIEGDVSAVKKGLVAVSHRLQDCQPVDKTRVISSKPVEAVSRVSFPEVGVEILPQ 262
Query: 234 LSLV----------PPLTGNPS-DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSG 282
S V PP N S D AS H S +++R LD +Q+V R+L +
Sbjct: 263 HSAVRPTIAQHSVAPPTVTNSSIDYASGTHLFSLESERVS-TLDTSTPQQQVVFRILCNN 321
Query: 283 WTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVL 342
G+IGK G IV +LQN +GA IS + ER++T++A E ++R+S Q VL
Sbjct: 322 DRVGGVIGKGGNIVTALQNETGATISIGPKVAGCDERLITVTASENPESRYSAAQKTVVL 381
Query: 343 VFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
VF+R VE ++G G ++G V+V ++V + VGCL G G + +SEM T T I+++
Sbjct: 382 VFSRVVESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRII 441
Query: 403 GGEQ-VLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKS 444
G +Q C +ND V++I G++ NV++++ + GRLR NL S
Sbjct: 442 GRDQGNPKCVPENDHVVEILGDFLNVKDSIYHITGRLRDNLFS 484
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 235/446 (52%), Gaps = 22/446 (4%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
G+ S+ + L + V FR++CP G +IG+ G+IIS IR++T ++ E G D
Sbjct: 30 GFYSQNQS-LKISPGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCD 88
Query: 69 HRVILVVGSGSIDR--RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG---DG 123
RV+L+ GS E+D VE G +SS Q+A++ VFERM E E+E G D
Sbjct: 89 ERVVLITGSDKDTEADNEQSKEDDSQVEKG-ISSVQKALLLVFERMAEGESETNGGDEDS 147
Query: 124 DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQI 180
+ LL ++++G ++GKGG + +M ESGA+I +LP P CA+ D+L+QI
Sbjct: 148 NKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQI 207
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL 240
TG A K+AL +++ L + + N P E P + P
Sbjct: 208 TGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFPA 267
Query: 241 TGNPSDNA---SEFHSSSADADRDH-PGLDKKGRKQEV-ALRMLFSGWTASGIIGKRGAI 295
G P +++HS++ + H G+ + Q++ R+L GIIGK G I
Sbjct: 268 QGAPYAAGVRDTDYHSNTPQLHKFHESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTI 327
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
+++LQN +G I + S +RV+ IS + D R SP Q+A + V +R V
Sbjct: 328 IKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVR------ 381
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
+ ++K V +LV + +GCL G G + ++EM ++G I+++G +Q+ CA++N+
Sbjct: 382 -AIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENE 440
Query: 416 VVIQISGEYKNVQNALSEVVGRLRHN 441
V+QI+GE++ VQ AL ++ RLRH+
Sbjct: 441 EVVQINGEFEAVQEALLQITTRLRHH 466
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALE------ 327
V R+L +IGK G I+ ++ +G + ++ ERVV I+ +
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 328 ---------YLDTRHSPVQNAAVLVFARSVEVEGQ-QGFSSGENKGDAVAVSILVGADFV 377
++ S VQ A +LVF R E E + G NK V +LV + V
Sbjct: 105 NEQSKEDDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQV 164
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
GCL G G S + +M +G I+++ +++ CA+ +D ++QI+GE + AL + +
Sbjct: 165 GCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQ 224
Query: 438 LRHNLKSGEILNEARPRSPSGRVGGPAL 465
L N + P S + GP L
Sbjct: 225 LLENPPRDYDIVSTNPTGSSSHLFGPPL 252
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 34/350 (9%)
Query: 104 AVIRVFERMWEVEAEVEGD--GDGDD------VAYCGLLANTTKIGVVVGKGGRNVTRMR 155
A +RV+ER+ V V GD G+G++ V C +LA ++G V+GKGG+ V RMR
Sbjct: 81 AAVRVWERV--VGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERMR 138
Query: 156 IESGAKIVML------PPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPI 209
ESGA+I + PP CA D+LI I+G+ A +KAL+ V+TCLQ +E S
Sbjct: 139 QESGAQIRVFRNKDQVPP--CALQGDELIHISGSFSAARKALLLVSTCLQDNPRLETSNF 196
Query: 210 CFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKG 269
R P + S +PP + ++H+ + ++ PG +
Sbjct: 197 STGRSFGPPGSGVGCPPGVDSHSQRSYLPP-------HIPDYHARNFSSNVAAPG-PRFF 248
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYL 329
+QE+ RM+ GIIGK GA +R+LQ+ +GA + + S ERV+ ISA E
Sbjct: 249 IEQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENS 308
Query: 330 DTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVS 389
+ HSP Q+A + V++R E + +K AV +LV + +GCL G G S ++
Sbjct: 309 EMMHSPAQDAVLRVYSRISE--------ASMDKSSAVPARLLVPSQHIGCLLGKGGSIIA 360
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
EM +VTG I++ G EQ+ CA +ND ++Q++G ++++Q+AL + GR+R
Sbjct: 361 EMRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIR 410
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 23/196 (11%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ + + GP + + FR++C +VGG+IG+ G+ I +++ DT +
Sbjct: 231 YHARNFSSNVAAPGPRFFIEQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVID 290
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
SD RVI++ EN ++ S Q+AV+RV+ R+ E
Sbjct: 291 AVADSDERVIVISAR----------ENSEMMH----SPAQDAVLRVYSRISEASM----- 331
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL + IG ++GKGG + MR +GA I + P CA +D+L+Q
Sbjct: 332 -DKSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIPRCAQRNDELVQ 390
Query: 180 ITGATLAVKKALVAVT 195
+TG +++ AL+ +T
Sbjct: 391 VTGNFQSIQDALLHIT 406
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Query: 339 AAVLVFARSV--EVEGQQGFSSGENK--GDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
AAV V+ R V V G E K V +L VGC+ G G V M
Sbjct: 81 AAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERMRQE 140
Query: 395 TGTDIKLV-GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLK 443
+G I++ +QV CA Q D +I ISG + + AL V L+ N +
Sbjct: 141 SGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCLQDNPR 190
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 191/362 (52%), Gaps = 51/362 (14%)
Query: 101 TQEAVIRVFERMWEVEAEVEGD----GDGDD-----VAYCGLLANTTKIGVVVGKGGRNV 151
T A +R +E + V VEGD G+ ++ C +LA ++G V+GKGG+ V
Sbjct: 74 TPAAAVRAWEHV--VGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTV 131
Query: 152 TRMRIESGAKIVM------LPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
RMR E GA+I + LPP A D+LI I+G+ V+KAL+AV+TCLQ
Sbjct: 132 ERMRQECGAQIRVFRNREQLPP--WAPPGDELIHISGSFSQVRKALLAVSTCLQD----N 185
Query: 206 KSPICFNRPIEKVFYSNSS--------DPHREFFPHLSLVPPLTGNPSDNASEFHSSSAD 257
P N PI + F S DPH + S +PP + ++H+ +
Sbjct: 186 PRPDTHNIPIGRPFGLPGSGTGCPPGMDPHSQ----RSYLPP-------HIPDYHTRNYP 234
Query: 258 ADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG 317
++ PG + +QE+ RM+ IIGK G+ +R+LQ+ +GA I P+ S
Sbjct: 235 SNAGPPG-PRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSD 293
Query: 318 ERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFV 377
ERVV I+A E D HSP Q+A V V++R E + ++ +LV + +
Sbjct: 294 ERVVAITARENSDMLHSPAQDAVVRVYSRISE--------ASIDRSSHTPARLLVPSQHI 345
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
GCL G G S +SEM +TG +I++ G EQ+ CA +ND ++Q++G ++++Q+AL + GR
Sbjct: 346 GCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGR 405
Query: 438 LR 439
+R
Sbjct: 406 IR 407
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 163/412 (39%), Gaps = 67/412 (16%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ Y ++ GP + + FR++ +VG +IG+ GS I +++ +T I
Sbjct: 228 YHTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILE 287
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
SD RV+ + EN ++ S Q+AV+RV+ R+ E
Sbjct: 288 PVADSDERVVAITAR----------ENSDMLH----SPAQDAVVRVYSRISEASI----- 328
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL + IG ++GKGG ++ MR +GA I + P CA +D+++Q
Sbjct: 329 -DRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQ 387
Query: 180 ITGATLAVKKALVAVTTCLQHL--------STMEKSPICFNRPIEKVFYSNSSDPHREFF 231
+TG+ +++ AL+ +T ++ + M P N P+ + S P
Sbjct: 388 VTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQ---SRQEQPP---- 440
Query: 232 PHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIG- 290
PHL P G P H DA H + + M + G +
Sbjct: 441 PHLH---PSGGMP---PYPMHPFRPDAPMGH--FEMGDHRPPPVHSMEYMGADRMPYLYG 492
Query: 291 -KRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
++G L+ S AP T S A+ D R PV
Sbjct: 493 VEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPATDFRKGPVA------------ 540
Query: 350 VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+E Q +G + +++ +++G + G+ S + E+E ++G I +
Sbjct: 541 IENQVATPTGTTE-------VIIPCNYIGFVCGNNGSEIEEIEKMSGASITV 585
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFA---------RSVE------VEGQQGFSSGENKG 363
RV T+ L H PV + AVLV + R+ E VEG + E +
Sbjct: 44 RVATLRPSRDLHVDHPPVGDEAVLVISGPDTPAAAVRAWEHVVGHRVEGDEAMGGEEEER 103
Query: 364 D---AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG-EQVLGCAAQNDVVIQ 419
+ AV +L VGC+ G G V M G I++ EQ+ A D +I
Sbjct: 104 EVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIH 163
Query: 420 ISGEYKNVQNALSEVVGRLRHNLK 443
ISG + V+ AL V L+ N +
Sbjct: 164 ISGSFSQVRKALLAVSTCLQDNPR 187
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 191/362 (52%), Gaps = 51/362 (14%)
Query: 101 TQEAVIRVFERMWEVEAEVEGD----GDGDD-----VAYCGLLANTTKIGVVVGKGGRNV 151
T A +R +E + V VEGD G+ ++ C +LA ++G V+GKGG+ V
Sbjct: 74 TPAAAVRAWEHV--VGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTV 131
Query: 152 TRMRIESGAKIVM------LPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
RMR E GA+I + LPP A D+LI I+G+ V+KAL+AV+TCLQ
Sbjct: 132 ERMRQECGAQIRVFRNREQLPP--WAPPGDELIHISGSFSQVRKALLAVSTCLQD----N 185
Query: 206 KSPICFNRPIEKVFYSNSS--------DPHREFFPHLSLVPPLTGNPSDNASEFHSSSAD 257
P N PI + F S DPH + S +PP + ++H+ +
Sbjct: 186 PRPDTHNIPIGRPFGLPGSGTGCPPGMDPHSQ----RSYLPP-------HIPDYHTRNYP 234
Query: 258 ADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG 317
++ PG + +QE+ RM+ IIGK G+ +R+LQ+ +GA I P+ S
Sbjct: 235 SNAGPPG-PRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSD 293
Query: 318 ERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFV 377
ERVV I+A E D HSP Q+A V V++R E + ++ +LV + +
Sbjct: 294 ERVVAITARENSDMLHSPAQDAVVRVYSRISE--------ASIDRSSHTPARLLVPSQHI 345
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
GCL G G S +SEM +TG +I++ G EQ+ CA +ND ++Q++G ++++Q+AL + GR
Sbjct: 346 GCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGR 405
Query: 438 LR 439
+R
Sbjct: 406 IR 407
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 163/412 (39%), Gaps = 67/412 (16%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ Y ++ GP + + FR++ +VG +IG+ GS I +++ +T I
Sbjct: 228 YHTRNYPSNAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILE 287
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
SD RV+ + EN ++ S Q+AV+RV+ R+ E
Sbjct: 288 PVADSDERVVAITAR----------ENSDMLH----SPAQDAVVRVYSRISEASI----- 328
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL + IG ++GKGG ++ MR +GA I + P CA +D+++Q
Sbjct: 329 -DRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQ 387
Query: 180 ITGATLAVKKALVAVTTCLQHL--------STMEKSPICFNRPIEKVFYSNSSDPHREFF 231
+TG+ +++ AL+ +T ++ + M P N P+ + S P
Sbjct: 388 VTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQ---SRQEQPP---- 440
Query: 232 PHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIG- 290
PHL P G P H DA H + + M + G +
Sbjct: 441 PHLH---PSGGMP---PYPMHPFRPDAPMGH--FEMGDHRPPPVHSMEYMGADRMPYLYG 492
Query: 291 -KRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
++G L+ S AP T S A+ D R PV
Sbjct: 493 VEQGGPRPFLEQPSPRTCPPEAPRTNSEVPRNMSDAVPATDFRKGPVA------------ 540
Query: 350 VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+E Q +G + +++ +++G + G+ S + E+E ++G I +
Sbjct: 541 IENQVATPTGTTE-------VIIPCNYIGFVCGNNGSEIEEIEKMSGASITV 585
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFA---------RSVE------VEGQQGFSSGENKG 363
RV T+ L H PV + AVLV + R+ E VEG + E +
Sbjct: 44 RVATLRPSRDLHVDHPPVGDEAVLVISGPDTPAAAVRAWEHVVGHRVEGDEAMGGEEEER 103
Query: 364 D---AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG-EQVLGCAAQNDVVIQ 419
+ AV +L VGC+ G G V M G I++ EQ+ A D +I
Sbjct: 104 EVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIH 163
Query: 420 ISGEYKNVQNALSEVVGRLRHNLK 443
ISG + V+ AL V L+ N +
Sbjct: 164 ISGSFSQVRKALLAVSTCLQDNPR 187
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 223/481 (46%), Gaps = 87/481 (18%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFP-GSDH 69
SSKR + V FRL+CP G +IG+ GS+I ++ T +I P S+
Sbjct: 5 SSKRPATTATAAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEE 64
Query: 70 RVILVV---GSGSIDRRIMFCENDVVVE-------------GGE----VSSTQEAVIRVF 109
RV+L++ G D + EN E GG+ SS Q A++RV
Sbjct: 65 RVVLIIAPSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVL 124
Query: 110 ERM--WEVEAEVEGDG--DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVM- 164
ER+ + A V+GDG G+ + C ++ ++ ++ KGG+ + R+R +SGA + +
Sbjct: 125 ERIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRIS 184
Query: 165 ----LPPPACAAIDDQLIQ--ITGATLAVKKALVAVTTCLQH---LSTMEKSPICFNRPI 215
+PP CA D +IQ ITG +VKKAL+ +T CLQ T ++ P
Sbjct: 185 STDQIPP--CAFPGDVVIQMKITGKFSSVKKALLLITNCLQESGAPPTWDECPF------ 236
Query: 216 EKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG---------LD 266
P G P D +HS DHP +
Sbjct: 237 -----------------------PQPGYPPD----YHSMEYHPQWDHPPNPMPEDVVPFN 269
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
+ ++EV+ R+L +IGK GA+VR+LQN SGA I + P S ER++ ISA
Sbjct: 270 RPVVEEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISAR 329
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
E L+ RHS Q+ + V R VE+ G AV +LV + ++G L G G
Sbjct: 330 ENLERRHSLAQDGVMRVHNRIVEI--------GFEPSAAVVARLLVHSPYIGRLLGKGGH 381
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
+SEM TG I++ +Q +Q+D ++Q+ G K VQ+AL +++ RLR + G
Sbjct: 382 LISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGR 441
Query: 447 I 447
+
Sbjct: 442 L 442
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 237/476 (49%), Gaps = 53/476 (11%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
G+ S+ + L + V FR++CP G +IG+ G+IIS IR++T ++ E G D
Sbjct: 30 GFYSQNQS-LKISPGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCD 88
Query: 69 HRVILVVGS--------------------------------GSIDRRIMFCENDVVVEGG 96
RV+L+ GS D+ + E+ V +G
Sbjct: 89 ERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKG- 147
Query: 97 EVSSTQEAVIRVFERMWEVEAEVEG---DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
+SS Q+A++ VFERM E E+E G D + LL ++++G ++GKGG + +
Sbjct: 148 -ISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQ 206
Query: 154 MRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPIC 210
M ESGA+I +LP P CA+ D+L+QITG A K+AL +++ L + +
Sbjct: 207 MSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVS 266
Query: 211 FNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNA---SEFHSSSADADRDH-PGLD 266
N P E P + P G P +++HS++ + H G+
Sbjct: 267 TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGVRDTDYHSNTPQLHKFHESGMP 326
Query: 267 KKGRKQEV-ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
+ Q++ R+L GIIGK G I+++LQN +G I + S +RV+ IS
Sbjct: 327 GWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISG 386
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ D R SP Q+A + V +R V + ++K V +LV + +GCL G G
Sbjct: 387 SAHPDDRISPAQDAVLRVQSRIVR-------AIPDSKEKTVIARLLVSSTQIGCLLGKGG 439
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ ++EM ++G I+++G +Q+ CA++N+ V+QI+GE++ VQ AL ++ RLRH+
Sbjct: 440 AIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHH 495
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 27/239 (11%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D+++FRL+C VGG+IG+ G+II +++ +T C I G P S+ RVI + GS
Sbjct: 331 PQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHP 390
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D RI S Q+AV+RV R+ + + + LL ++T+I
Sbjct: 391 DDRI--------------SPAQDAVLRVQSRIVRAIPDSK-----EKTVIARLLVSSTQI 431
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GKGG + MR SGA I +L P CA+ +++++QI G AV++AL+ +TT
Sbjct: 432 GCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTR 491
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
L+H + N P F ++ P + PP G S+ FH A
Sbjct: 492 LRHHHF--RDAFSVNHPSNPAF-TDQVPPFPPYLARREFSPP--GMYSNLGPSFHKFDA 545
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 45/237 (18%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS--------- 324
V R+L +IGK G I+ ++ +G + ++ ERVV I+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 325 -------------ALEYLDTRH----------------------SPVQNAAVLVFARSVE 349
A E DT+ S VQ A +LVF R E
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 350 VEGQ-QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
E + G NK V +LV + VGCL G G S + +M +G I+++ +++
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPAL 465
CA+ +D ++QI+GE + AL + +L N + P S + GP L
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPL 281
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/476 (30%), Positives = 237/476 (49%), Gaps = 53/476 (11%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
G+ S+ + L + V FR++CP G +IG+ G+IIS IR++T ++ E G D
Sbjct: 30 GFYSQNQS-LKISPGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCD 88
Query: 69 HRVILVVGS--------------------------------GSIDRRIMFCENDVVVEGG 96
RV+L+ GS D+ + E+ V +G
Sbjct: 89 ERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKG- 147
Query: 97 EVSSTQEAVIRVFERMWEVEAEVEG---DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
+SS Q+A++ VFERM E E+E G D + LL ++++G ++GKGG + +
Sbjct: 148 -ISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQ 206
Query: 154 MRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPIC 210
M ESGA+I +LP P CA+ D+L+QITG A K+AL +++ L + +
Sbjct: 207 MSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVS 266
Query: 211 FNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNA---SEFHSSSADADRDH-PGLD 266
N P E P + P G P +++HS++ + H G+
Sbjct: 267 TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGVRDTDYHSNTPQLHKFHESGMP 326
Query: 267 KKGRKQEV-ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
+ Q++ R+L GIIGK G I+++LQN +G I + S +RV+ IS
Sbjct: 327 GXMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISG 386
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ D R SP Q+A + V +R V + ++K V +LV + +GCL G G
Sbjct: 387 SAHPDDRISPAQDAVLRVQSRIVR-------AIPDSKEKTVIARLLVSSTQIGCLLGKGG 439
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ ++EM ++G I+++G +Q+ CA++N+ V+QI+GE++ VQ AL ++ RLRH+
Sbjct: 440 AIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHH 495
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 118/239 (49%), Gaps = 27/239 (11%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D+++FRL+C VGG+IG+ G+II +++ +T C I G P S+ RVI + GS
Sbjct: 331 PQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHP 390
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D RI S Q+AV+RV R+ + + + LL ++T+I
Sbjct: 391 DDRI--------------SPAQDAVLRVQSRIVRAIPDSK-----EKTVIARLLVSSTQI 431
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GKGG + MR SGA I +L P CA+ +++++QI G AV++AL+ +TT
Sbjct: 432 GCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTR 491
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
L+H + N P F ++ P + PP G S+ FH A
Sbjct: 492 LRHHHF--RDAFSVNHPSNPAF-TDQVPPFPPYLARREFSPP--GMYSNLGPSFHKFDA 545
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 94/237 (39%), Gaps = 45/237 (18%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS--------- 324
V R+L +IGK G I+ ++ +G + ++ ERVV I+
Sbjct: 45 VVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEAD 104
Query: 325 -------------ALEYLDTRH----------------------SPVQNAAVLVFARSVE 349
A E DT+ S VQ A +LVF R E
Sbjct: 105 NEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAE 164
Query: 350 VEGQ-QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
E + G NK V +LV + VGCL G G S + +M +G I+++ +++
Sbjct: 165 GESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLP 224
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPAL 465
CA+ +D ++QI+GE + AL + +L N + P S + GP L
Sbjct: 225 LCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPL 281
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 220/480 (45%), Gaps = 86/480 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFP-GSDH 69
+SKR + V FRL+CP G +IG+ GS+I ++ T +I P S+
Sbjct: 5 TSKRPATTATAAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEE 64
Query: 70 RVILVVG-SGSIDRRIMFCEND---------------VVVEGGE----VSSTQEAVIRVF 109
RV+L++ SG C+++ GG+ SS Q A++RVF
Sbjct: 65 RVVLIIAPSGKKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVF 124
Query: 110 ERMWEVEAEVEGDGD----GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVM- 164
ER+ + DGD G+ C ++ ++ ++ KGG+ + ++R +SGA + +
Sbjct: 125 ERIVFGDDAATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRIS 184
Query: 165 ----LPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH---LSTMEKSPICFNRPIEK 217
+PP CA D +IQ+ G +VKKAL+ VT CLQ T ++ P
Sbjct: 185 STDQIPP--CAFPGDVVIQMNGKFSSVKKALLLVTNCLQESGAPPTWDECP--------- 233
Query: 218 VFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHP----------GLDK 267
FP P E+HS DHP ++
Sbjct: 234 -------------FPQPGYPP-----------EYHSMEYHPQWDHPPPNPMPEDVGPFNR 269
Query: 268 KGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALE 327
++EVA R+L +IGK GA+VR+LQN SGA I + P S ER++ ISA E
Sbjct: 270 PVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARE 329
Query: 328 YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSA 387
L+ RHS Q+ + V R VE+ GF AV +LV + ++G L G G
Sbjct: 330 NLERRHSLAQDGVMRVHNRIVEI----GFEPSA----AVVARLLVHSPYIGRLLGKGGHL 381
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEI 447
+SEM TG I++ +Q +Q+D ++Q+ G K VQ+AL +++ RLR + G +
Sbjct: 382 ISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRL 441
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 152/497 (30%), Positives = 236/497 (47%), Gaps = 78/497 (15%)
Query: 4 HSNPYGYSSKRRGP-----LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI 58
++ P G +RR L + V FRL+C +GG+IG+ GSIIS IR++T ++
Sbjct: 8 NAGPNGRGKRRRSSGGFSSLGVSPGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKL 67
Query: 59 HCEGGFPGSDHRVILVVGS-----------------------------------GSIDRR 83
E PG D RVI + GS G+ D+R
Sbjct: 68 RIEEAVPGCDERVITISGSEKETEEDNTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKR 127
Query: 84 IMFCENDVV-VEGGEV----SSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA--YCGLLA 135
E D V VE + S+ +A+ VFERM E VE EGD + + + + LL
Sbjct: 128 ----EKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKPSSFFLRLLI 183
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALV 192
T ++G V+GKGG + RM ESGA+I +LP PACA+ D+++QI+G+ V+KAL
Sbjct: 184 LTAQVGCVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQISGSVEVVRKALQ 243
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVP----PLTGNPSDNA 248
+V+ L +E P + + SS +F PH P P D
Sbjct: 244 SVSQQL-----LENPPRDHDS-LSAKSTGPSSHSFGQFPPHNRSFSAQGEPFASGPHD-I 296
Query: 249 SEFHSSSADADRDHPGLDKKGR----KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
S FHS++ + H GR ++ + R+L IIGK GAI++++Q +
Sbjct: 297 SAFHSAAPLIPKFHEAA-IHGRMRPLQEMLTFRLLCPAERVGNIIGKGGAIIKTVQQETA 355
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
+ I S + V+ IS + + R SPVQ A V R + + K
Sbjct: 356 SEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIAK-------PIPDAKDH 408
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY 424
+ LV + +GCL G G S ++EM +G I+++G ++V CA++++ VIQ++GE
Sbjct: 409 IMLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEI 468
Query: 425 KNVQNALSEVVGRLRHN 441
+ V +AL ++ RL+H+
Sbjct: 469 EAVHDALLQITTRLKHH 485
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 34/223 (15%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
++++FRL+CP VG +IG+ G+II +++++T I P S+ VI++ G +
Sbjct: 323 EMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPED 382
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
RI S QEAV RV R+ + + + D + L ++T+IG
Sbjct: 383 RI--------------SPVQEAVFRVQTRIAKPIPDAK-----DHIMLARFLVSSTQIGC 423
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
++GKGG +T MR +SGA I +L P CA+ D+++IQ+ G AV AL+ +TT L+
Sbjct: 424 LLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLK 483
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG 242
H CF V Y ++S F L PP G
Sbjct: 484 HH--------CFRDSYPSVNYPSNS----PFLDQLPPFPPYLG 514
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 188/358 (52%), Gaps = 42/358 (11%)
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQIT 181
V C +LA ++G V+GKGG+ V RMR ESGA+I + PP CA D+LI I+
Sbjct: 109 VVGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPP--CALQGDELIHIS 166
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPI----EKVFYSNSSDPHREFFPHLSLV 237
G+ A +KAL+ V+TCLQ + S RP V DPH + S +
Sbjct: 167 GSFSAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPGVDPHSQ----RSYL 222
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
PP + ++H+ + ++ PG + +QE+ RM+ G+IGK G+ +R
Sbjct: 223 PP------PHVPDYHARNFSSNGAAPG-PRFFVEQEIVFRMICLNDMVGGVIGKGGSTIR 275
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
+LQ+ +GA + P+ S ER++ ISA E + SP Q+A + V+++ E
Sbjct: 276 ALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISE-------- 327
Query: 358 SGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVV 417
+ +K +V +LV A +GCL G G S ++EM +TG I++ G EQ+ CA +ND +
Sbjct: 328 ASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDEL 387
Query: 418 IQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR-----SPSGRVGGPALHKLHQ 470
+Q++G ++++Q+AL + GR+R +++ +P P VG P+ H+ Q
Sbjct: 388 VQVTGSFQSIQDALLHITGRIR------DLIIPPKPHPSGGMPPYPPVGNPSHHQSRQ 439
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 23/202 (11%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ + + GP + + FR++C +VGG+IG+ GS I +++ +T +
Sbjct: 230 YHARNFSSNGAAPGPRFFVEQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVID 289
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
SD R+I++ EN ++ S +Q+A++RV+ ++ E
Sbjct: 290 PVADSDERIIVISAR----------ENSEMMR----SPSQDALLRVYSKISEASM----- 330
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL IG ++GKGG + MR +GA I + P CA +D+L+Q
Sbjct: 331 -DKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQ 389
Query: 180 ITGATLAVKKALVAVTTCLQHL 201
+TG+ +++ AL+ +T ++ L
Sbjct: 390 VTGSFQSIQDALLHITGRIRDL 411
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 178/332 (53%), Gaps = 36/332 (10%)
Query: 114 EVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVM------LPP 167
E E EV G V C +LA + ++G V+GKGG+ V RMR ESGA+I + LPP
Sbjct: 101 EEEREVPG------VVGCRMLAASGQVGCVLGKGGKTVERMRQESGAQIRVFRNRDQLPP 154
Query: 168 PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPH 227
AA D+LI I+G AV+KAL+ VTTCLQ + S F DPH
Sbjct: 155 --WAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDAS--NFPPGRFGPPGPVGIDPH 210
Query: 228 REFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG 287
+ +PP + ++H+ + ++ PG + +QE+ RM+
Sbjct: 211 SQ----RGYLPP-------SMPDYHARNYSSNMAAPG-PRFFVEQEIVFRMICLNEMVGS 258
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IIGK G+ +R+LQ+ +GA I P + S ERV+ ISA E + HSP Q+A + V +R
Sbjct: 259 IIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRI 318
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
E S +K AV +LV + +GCL G G S ++EM +TG I++ G EQ+
Sbjct: 319 SE--------SSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQI 370
Query: 408 LGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
CA +ND ++Q++G ++++Q+AL + GR+R
Sbjct: 371 PRCAQRNDELVQVTGSFQSIQDALLHITGRIR 402
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ Y + GP + + FR++C +VG +IG+ GS I +++ +T I
Sbjct: 223 YHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIE 282
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
S+ RVI++ EN ++ S Q+AV+RV R+ E
Sbjct: 283 PNSDSEERVIVISAH----------ENSEMMH----SPAQDAVLRVHSRI------SESS 322
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL + IG ++GKGG + MR +GA I + P CA +D+L+Q
Sbjct: 323 MDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQ 382
Query: 180 ITGATLAVKKALVAVT 195
+TG+ +++ AL+ +T
Sbjct: 383 VTGSFQSIQDALLHIT 398
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 221/464 (47%), Gaps = 54/464 (11%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
PL V FR++CP P +G + G G++IS IR++T ++ E PG D ++I++ G
Sbjct: 37 PLKSSPAAVVFRILCPAPKIGTVTGEGGAVISQIRQETGAKVIVEENIPGCDEQIIVITG 96
Query: 77 SGSI------------DRRIMFCE-----ND----------VVVEGG----EVSSTQEAV 105
S D E ND V VE E SS Q+A+
Sbjct: 97 SDEKTEVSIEQSKKDGDEEANVAEESDNKNDGNEKEEEKEGVPVEDSGTVKETSSMQKAL 156
Query: 106 IRVFERMWEVEAEVEGDGDGDD----VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAK 161
+ V +M+E + +G GD ++ LL ++++G ++GKGG + +M ESGA+
Sbjct: 157 LLVSGKMFEADPVTDG-GDEENNKPSTFILRLLVLSSQVGCLLGKGGSVIKQMSAESGAQ 215
Query: 162 IVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKV 218
I + P P C+++ D+L++ITG AV+KAL +V+ L + N
Sbjct: 216 IRISPRDRLPICSSVSDELVEITGEIDAVRKALQSVSKQLLENPPRDHDSFPANPSGTSS 275
Query: 219 FYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRM 278
S S P E + G P S S D+ P D + R+
Sbjct: 276 HSSGHSHPRPEAYLQRHSFS-GRGKPYAVRSRDRHESVIQDQMKPVPDV------LTFRL 328
Query: 279 LFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQN 338
L G+IGK G I++ L+ +G I ++ S +RV+ IS L + D R S Q+
Sbjct: 329 LCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVISGLAHPDDRISAPQD 388
Query: 339 AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTD 398
A + V R + NK A+ +LV ++ +GCL G G + +SEM +G
Sbjct: 389 AVIRVQTRIA--------MAISNKEKAIIARLLVSSNQIGCLLGKGGAIMSEMRKSSGAY 440
Query: 399 IKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
I+++G +Q+ CA++++ V+QI+GE++ V+ AL ++ RLRH+
Sbjct: 441 IRILGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRLRHHF 484
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 217/442 (49%), Gaps = 44/442 (9%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
DDVV FR++CP P +G +IG+ GSII ++R+++ +I PG D RVIL+ + +
Sbjct: 1 DDVV-FRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGN 59
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG-DGDDV-------AYCGL 133
R + + E++ QEA+ +V R+ A+VE G DG D L
Sbjct: 60 DRGRGKDGN----SEELTPAQEALFKVHARII---ADVETSGIDGSDQEEEPSQQVVTRL 112
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKA 190
L +IG ++GKGG+ + +MR +GA+I +LP P CA D+L+Q++G +KKA
Sbjct: 113 LVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKA 172
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN------- 243
L+ ++ LQ E P +RP + + P ++ S TG+
Sbjct: 173 LLFISARLQ-----ENPP--RDRPQSYAAPAPAFVPVTDYLAKDSYRSKGTGHVFGLGPE 225
Query: 244 PSDNAS-EFHSSSADADRDHPGLDKKGR---KQEVALRMLFSGWTASGIIGKRGAIVRSL 299
P + S S + DR K+GR + E+ R+L +IGK G+I+ +L
Sbjct: 226 PLEGRSWTISSGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNL 285
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
+ +GA I A + S ERV+ +SALE SP A + V +R G
Sbjct: 286 RKDTGARIKIANAVPGSDERVIIVSALELPGDSFSPALEAMIQVQSRITA-------EMG 338
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
+K + +LV + +GCL G G S + +M T +I+++ + + CA D ++Q
Sbjct: 339 GDKDGIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQ 398
Query: 420 ISGEYKNVQNALSEVVGRLRHN 441
I G+ + AL +V+ RLR+N
Sbjct: 399 IVGDTTVAREALFQVISRLRNN 420
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 211/437 (48%), Gaps = 27/437 (6%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
Y R L + D FR +CP +G +IGR G I+ +R DT+ +I PG D
Sbjct: 29 YRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDE 88
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
RVI + D F + + V+ S Q+A+ R+ +R+ +A+ E +G+
Sbjct: 89 RVITIYSPS--DETNAFGDGEKVL-----SPAQDALFRIHDRVVADDAQSEDSSEGEQQV 141
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLA 186
LL + +IG ++G+GG+ V +R E+GA+I ++ P CA D+LIQI+G L
Sbjct: 142 TAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLI 201
Query: 187 VKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD 246
VKKAL + + L +S + I + S S H P L + PL G+
Sbjct: 202 VKKALHQIASRLHE--NPSRSQNLLSSAISGGYPSGSLMSH-AGGPRLVGIAPLMGSYGR 258
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
+ ++ R+ P E +R++ + +IGK GA++ L+ + A
Sbjct: 259 DGGDWSRPLYQPPRNDPP------ATEFFIRLVSPVENIASVIGKGGALINQLRQETRAT 312
Query: 307 ISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR-SVEVEGQQGFSSGENKGDA 365
I + T+ + ++TISA E + +SP A + + + S +VE G S
Sbjct: 313 IKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSEKVERDSGLVS------- 365
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+LV + +GC+ G G + ++EM +T +I+++G E + A+ +D ++QISGE
Sbjct: 366 FTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELD 425
Query: 426 NVQNALSEVVGRLRHNL 442
+ AL ++ RLR N+
Sbjct: 426 VAKEALIQITSRLRANV 442
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 155/275 (56%), Gaps = 9/275 (3%)
Query: 176 QLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP--- 232
+L QI G +VKKAL+AV+ LQ +++ + +R E V S P
Sbjct: 8 ELYQIEGQLTSVKKALIAVSHRLQDCPPPDRTKMTGSRHYEVVQSETFSVPLESLTNLHI 67
Query: 233 --HL---SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG 287
HL S + L+ + NAS H SA+ +R LD K +QEV R++ S
Sbjct: 68 DHHLQRSSTLSTLSNRSNGNASGAHKLSAEVNRV-SALDPKAYQQEVTFRIICSNDRVGA 126
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
+IGK G+IVR+LQN SGA+IS L + +R+VTI+A E ++ +SP Q A VLVF++S
Sbjct: 127 VIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVLVFSKS 186
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
VE ++G G K V ++V ++ VGCL G G + VSEM TG +I+++G +QV
Sbjct: 187 VEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDQV 246
Query: 408 LGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
C + ND ++QISG + NVQ A+ GRLR +L
Sbjct: 247 PMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHL 281
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V+FR++C VG +IG+ GSI+ +++ ++ I + R++ + S
Sbjct: 113 VTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITAS------- 165
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWE--VEAEVEGDGDGDDVAYCGLLANTTKIGV 142
EN S Q+AV+ VF + E VE +E + L+ + ++G
Sbjct: 166 ---EN----PESTYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGC 218
Query: 143 VVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKAL 191
++GKGG V+ MR +GA I ++ P C + +DQL+QI+G V+ A+
Sbjct: 219 LLGKGGAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAI 270
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 217/442 (49%), Gaps = 53/442 (11%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
DDVV +R++CP +G +IG+ GSII S+R +T +I G PGSD RVI + S
Sbjct: 44 DDVV-YRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRER 102
Query: 82 RR------IMFCENDVVVEGGE---VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG 132
R + D G E + ++QEA+ +VF R+ E E E + +V
Sbjct: 103 REGKPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRNVT-AR 161
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKK 189
LL + +IG ++GK G+ + +MR+ESGA+I +LP P CA D+L+Q+TG VKK
Sbjct: 162 LLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVKK 221
Query: 190 ALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE--FFPHLSLVPPLTGNPSDN 247
AL ++T L N P +K + P +E P +L+PP P N
Sbjct: 222 ALTTISTRLYD-----------NPPRDKPPQAGHLGPFQESTILPG-TLLPPGAFFPQGN 269
Query: 248 ASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
AS E A+R+L +IGK G I+RS++ + A I
Sbjct: 270 ASIAPVEG-----------------EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARI 312
Query: 308 SFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA 367
A + + ERV+ I++ E L + SP A + + +R + S E G A+
Sbjct: 313 KIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRISD-------PSAEKDG-AMT 364
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
LV + +GCL G S +++M T +I+++ E + CA ++D ++Q+ G+
Sbjct: 365 TRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVA 424
Query: 428 QNALSEVVGRLRHNLKSGEILN 449
++A+ E++ RLR N+ S + N
Sbjct: 425 RDAVIEIITRLRANIFSEHMKN 446
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 233/495 (47%), Gaps = 70/495 (14%)
Query: 4 HSNPYGYSSKRRG-----PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI 58
++ P G +R+ PL++ V FRL+C +G +IG+ GSIIS IR +T ++
Sbjct: 8 NAGPNGRGKRRKSSGGFSPLDVSPGSVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKV 67
Query: 59 HCEGGFPGSDHRVILVVGSG------SIDRRIMFCENDVVVEGGE--------------- 97
E PG D RVI + GS + ++ +ND V G+
Sbjct: 68 KIEEAVPGCDERVITISGSDKEAEEYTAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNED 127
Query: 98 -----------------VSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA--YCGLLANT 137
S+ +A+ VFERM E VE EGD + + + + LL T
Sbjct: 128 KEEKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKSSSFFLRLLILT 187
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
++G V+GKGG + RM ESGA+I +LP P CA+ D+++QI+G+ V+KAL +V
Sbjct: 188 AQVGCVLGKGGSVIKRMAAESGAQIRILPKDKVPVCASAFDEIVQISGSVEVVRKALQSV 247
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH----LSLVPPLTGNPSDNASE 250
+ L ++P + + SS +F PH + P P D S
Sbjct: 248 SQQLL------ENPPRDHESLSAKSTGPSSHSFGQFPPHNHSFAAQGEPFATGPHD-ISA 300
Query: 251 FHSSSADADRDH-PGLDKKGR--KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
FHS+ + H + + R ++ + R+L IIGK GAI++++Q + + I
Sbjct: 301 FHSAPPLIPKFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEI 360
Query: 308 SFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA 367
S + V+ IS + + R SPVQ A V R + + +
Sbjct: 361 KVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAK-------PIPDANDHTML 413
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
LV ++ +GCL G G S ++EM +G I+++G ++V CA++++ VIQ++GE + V
Sbjct: 414 ARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAV 473
Query: 428 QNALSEVVGRLRHNL 442
AL ++ RL+H+
Sbjct: 474 HEALLQITTRLKHHF 488
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 34/223 (15%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
++++FRL+CP VG +IG+ G+II +++++T I P S+ VI++ G +
Sbjct: 325 EMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPED 384
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
R VS QEAV RV R+ + + D L ++ +IG
Sbjct: 385 R--------------VSPVQEAVFRVQTRIAKPIPDA-----NDHTMLARFLVSSNQIGC 425
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
++GKGG +T MR +SGA I +L P CA+ D+++IQ+ G AV +AL+ +TT L+
Sbjct: 426 LLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRLK 485
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG 242
H + P N P SNS F L PP G
Sbjct: 486 HHFFRDSYP-SVNYP------SNSP-----FLDQLPPFPPYLG 516
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 211/442 (47%), Gaps = 39/442 (8%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
Y R L + D FR +CP +G +IGR G I+ +R DT+ +I PG D
Sbjct: 35 YRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDE 94
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
RVI + D F + + V+ S Q+A+ R+ +R+ +A E +G+
Sbjct: 95 RVITIYSPS--DETNAFGDGEKVL-----SPAQDALFRIHDRVVADDARSEDSPEGEKQV 147
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLA 186
LL + +IG ++G+GG+ V +R E+GA+I ++ P CA D+LIQI+G L
Sbjct: 148 TAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLI 207
Query: 187 VKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFF-----PHLSLVPPLT 241
VKKAL+ + + L + ++ + S+ P P L + PL
Sbjct: 208 VKKALLQIASRLHENPSRSQN----------LLSSSGGYPAGSLMSHAGGPRLVGLAPLM 257
Query: 242 GNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQN 301
G+ +A ++ R+ P E +R++ + +IGK GA++ L+
Sbjct: 258 GSYGRDAGDWSRPLYQPPRNDPP------ATEFFIRLVSPVENIASVIGKGGALINQLRQ 311
Query: 302 ASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR-SVEVEGQQGFSSGE 360
+ A I + T+ + ++TISA E + +SP A + + + S +VE G S
Sbjct: 312 ETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVS-- 369
Query: 361 NKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQI 420
+LV + +GC+ G G + ++EM +T +I+++G E + A+ +D ++QI
Sbjct: 370 -----FTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQI 424
Query: 421 SGEYKNVQNALSEVVGRLRHNL 442
SGE + AL ++ RLR N+
Sbjct: 425 SGELDVAKEALIQITSRLRANV 446
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
DRD +D+ + R L +IG+ G IV+ L+N + + I + E
Sbjct: 39 DRDSLVIDR----DDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDE 94
Query: 319 RVVTI-------SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS-SGENKGDAVAVSI 370
RV+TI +A + SP Q+A + R V + + S GE + V +
Sbjct: 95 RVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQ---VTAKL 151
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
LV +D +GC+ G G V + TG I++V + CA +D +IQISGE V+ A
Sbjct: 152 LVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKA 211
Query: 431 LSEVVGRLRHNLKSGEILNEARPRSPSGRV----GGPAL 465
L ++ RL N + L + P+G + GGP L
Sbjct: 212 LLQIASRLHENPSRSQNLLSSSGGYPAGSLMSHAGGPRL 250
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 214/458 (46%), Gaps = 41/458 (8%)
Query: 3 HHSNPYGYSSKRRGP--------LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDT 54
H + G +KRR P L DD V FR +CP +G +IGR G I+ +R DT
Sbjct: 15 HSDSDAGSKNKRRNPAADDSSSSLITADDTV-FRYLCPVRKIGSVIGRGGDIVKQLRADT 73
Query: 55 KCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFERMW 113
K +I PG D RV+ + S E + E G+ VS Q+A+ RV +R+
Sbjct: 74 KAKIRIGDALPGCDERVVTIHSSSE--------ETNHFDETGDLVSPAQDALFRVHQRVI 125
Query: 114 EVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PAC 170
+A + D + + V LL + +IG V+GKGG+ V +R E+GA+I +L P C
Sbjct: 126 AEDAREDEDDERNHVT-AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPC 184
Query: 171 AAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF 230
A +D+L+QI+G VKKAL Q + + +P + +
Sbjct: 185 ALSNDELVQISGEAAVVKKAL------FQIAAQIRDNPSRSQHLLASAVPGGYAAGGPGA 238
Query: 231 FPHLSLVPPLTGNPSDNASEFHSSSADADRD-HPGLDKKGRKQEVALRMLFSGWTASGII 289
+ V P G + + D R +P + +E ++R + G+I
Sbjct: 239 GAPIMGVAPFVG----AYGGYKGDTGDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVI 294
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
GK GAI+ ++ SGA I + T+ + ++ IS E+ + SP AAV + R E
Sbjct: 295 GKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDSFSPTIEAAVRLQPRCSE 354
Query: 350 -VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
VE G S +LV +GCL G G + V+EM +T +I+++ E +
Sbjct: 355 KVERDSGIVS-------FTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKENLP 407
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
A+++D ++QISG+ ++AL + + RLR NL E
Sbjct: 408 KIASEDDEMVQISGDLDVAKDALVQALTRLRANLFDKE 445
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 220/448 (49%), Gaps = 40/448 (8%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
D +R++CP+ V+G +IG+ G +I S+R++T+ +I PG D RVI V+ S + +
Sbjct: 40 DSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVI-VIFSSPLSK 98
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
++D E V Q+ ++RV + + + + D D LL ++IG
Sbjct: 99 DKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGS 158
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++GKGG N+ ++R ESGA+I +P P CA D+L+ I+G AVKKAL AV+ L
Sbjct: 159 LIGKGGNNIQKLRSESGAQI-QIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFL 217
Query: 199 QHLSTMEKSPICFNRP-----------IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD- 246
E+ P P + +N F H +L P+ G S
Sbjct: 218 FKHPPKEQIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRL 277
Query: 247 -----NASEFHSSSADADRDHPGLDKKGRK------QEVALRMLFSGWTASGIIGKRGAI 295
SE S+ ++ P K G +E ++R+L G+IGK G
Sbjct: 278 PGLGGYGSEAGSAWPLSNPALPSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNT 337
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
++S++N +GA I T+S ERV+ +SA E D R SP A +L+ QG
Sbjct: 338 IKSMRNDTGASIRVEDAQTESDERVIVVSATELADDRVSPTIEAVLLL----------QG 387
Query: 356 FSSGENKGD-AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
+SG D A++ LV + +GCL G G + +SEM T +I++ ++ C ++N
Sbjct: 388 KTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSEN 447
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ ++Q++GE ++AL +++ RLR N+
Sbjct: 448 EELVQVTGEPGVAKDALIQILKRLRENI 475
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 160/303 (52%), Gaps = 34/303 (11%)
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSN---------SSDPHR 228
+ I G+ +VKKALVAV+ LQ +++ + E + + S P
Sbjct: 1 MMIEGSVSSVKKALVAVSRNLQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRE 60
Query: 229 EFF--------------------PHL----SLVPPLTGNPSDNASEFHSSSADADRDHPG 264
F HL S + L + + A+ HS SA+ +R
Sbjct: 61 TFIGAPRETLTAVPCETLTDLHVDHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVS-S 119
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
L+ K +QE+ +++ S G+IGK G I+R+LQ+ +GA +S + + +R++TI+
Sbjct: 120 LEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITIT 179
Query: 325 ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSG 384
A E ++R+SP Q A VLVF+RSVE ++G SG N G +V ++V ++ VGCL G G
Sbjct: 180 ASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKG 239
Query: 385 SSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKS 444
VSEM TG I++VG ++V CA+ ND V+QISGE+ NVQ+AL GRLR NL
Sbjct: 240 GVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLFG 299
Query: 445 GEI 447
G +
Sbjct: 300 GTL 302
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 91/183 (49%), Gaps = 25/183 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++F+++C +GG+IG+ G+II +++ +T + + R+I + S S + R
Sbjct: 129 ITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESR- 187
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVE-----GDGDGDDVAYCGLLANTTK 139
S Q+A + VF R VEA +E G G V L+ ++ +
Sbjct: 188 -------------YSPAQKATVLVFSR--SVEAGIEKGIDSGLNTGSSVT-AQLVVSSNQ 231
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKALVAVTT 196
+G ++GKGG V+ MR +GA I ++ CA+ +DQ++QI+G V+ AL T
Sbjct: 232 VGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATG 291
Query: 197 CLQ 199
L+
Sbjct: 292 RLR 294
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 200/421 (47%), Gaps = 37/421 (8%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP +G +IGR G I+ +R DTK +I PGSD RVI + + +
Sbjct: 45 YRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASN------- 97
Query: 87 CENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
E + + E + VS QEA+ ++ +R+ + E G LL + +IG ++G
Sbjct: 98 -ETNSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIG 156
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
KGG+ V +R E+GA++ +L P CA D+L+QI+G L VKKAL + + L
Sbjct: 157 KGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLH--D 214
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDH 262
+S I V+ S S L+ P G P + S
Sbjct: 215 NPSRSQHLLASAIPGVYSSGGS-----------LMAPTHGAPIMGLAPLVSPYGGYKAPR 263
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
L K E +LR++ G+IGK GAI+ ++ + A I + T+ + ++
Sbjct: 264 EDLSSK----EFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLIN 319
Query: 323 ISALEYLDTRHSPVQNAAVLVFAR-SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
IS+ E+ + +SP AA+ + R S +VE G S +LV +GCL
Sbjct: 320 ISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIIS-------FTTRLLVPTSRIGCLI 372
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
G G + ++E+ +T +I+++ E + A ++D ++QISG+ + AL +V RLR N
Sbjct: 373 GKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRAN 432
Query: 442 L 442
L
Sbjct: 433 L 433
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 25/198 (12%)
Query: 6 NPYG-YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
+PYG Y + R +L S RL+CPT +GG+IG+ G+II+ IR++TK I +
Sbjct: 254 SPYGGYKAPRE---DLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSA 310
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
D +I +I + F ++ S T EA +R+ R E +VE D
Sbjct: 311 TEGDDCLI------NISSKEFFEDS--------YSPTLEAALRLQPRCSE---KVERDS- 352
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQIT 181
G LL T++IG ++GKGG +T +R + A I +L P A DD+++QI+
Sbjct: 353 GIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQIS 412
Query: 182 GATLAVKKALVAVTTCLQ 199
G K+ALV + T L+
Sbjct: 413 GDLDVAKEALVHIVTRLR 430
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
DRD +D ++ R L +IG+ G IV+ L+ + + I + S E
Sbjct: 32 DRDQFVIDS----EDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDE 87
Query: 319 RVVTI-------SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSIL 371
RV+TI ++LE SP Q A + R V + S G G V +L
Sbjct: 88 RVITIYSASNETNSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEG--GGHQVTARLL 145
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V +D +GC+ G G V + TG ++++ + + CA +D ++QISGE V+ AL
Sbjct: 146 VPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKAL 205
Query: 432 SEVVGRLRHN-LKSGEILNEARP 453
++ RL N +S +L A P
Sbjct: 206 YQIASRLHDNPSRSQHLLASAIP 228
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 200/421 (47%), Gaps = 37/421 (8%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP +G +IGR G I+ +R DTK +I PGSD RVI + + +
Sbjct: 45 YRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASN------- 97
Query: 87 CENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
E + + E + VS QEA+ ++ +R+ + E G LL + +IG ++G
Sbjct: 98 -ETNSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIG 156
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
KGG+ V +R E+GA++ +L P CA D+L+QI+G L VKKAL + + L
Sbjct: 157 KGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLH--D 214
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDH 262
+S I V+ S S L+ P G P + S
Sbjct: 215 NPSRSQHLLASAIPGVYSSGGS-----------LMAPTHGAPIMGLAPLVSPYGGYKAPR 263
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
L K E +LR++ G+IGK GAI+ ++ + A I + T+ + ++
Sbjct: 264 EDLSSK----EFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLIN 319
Query: 323 ISALEYLDTRHSPVQNAAVLVFAR-SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
IS+ E+ + +SP AA+ + R S +VE G S +LV +GCL
Sbjct: 320 ISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIIS-------FTTRLLVPTSRIGCLI 372
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
G G + ++E+ +T +I+++ E + A ++D ++QISG+ + AL +V RLR N
Sbjct: 373 GKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRAN 432
Query: 442 L 442
L
Sbjct: 433 L 433
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 25/198 (12%)
Query: 6 NPYG-YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
+PYG Y + R +L S RL+CPT +GG+IG+ G+II+ IR++TK I +
Sbjct: 254 SPYGGYKAPRE---DLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSA 310
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
D +I +I + F ++ S T EA +R+ R E +VE D
Sbjct: 311 TEGDDCLI------NISSKEFFEDS--------YSPTLEAALRLQPRCSE---KVERDS- 352
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQIT 181
G LL T++IG ++GKGG +T +R + A I +L P A DD+++QI+
Sbjct: 353 GIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQIS 412
Query: 182 GATLAVKKALVAVTTCLQ 199
G K+ALV + T L+
Sbjct: 413 GDLDVAKEALVHIVTRLR 430
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
DRD +D ++ R L +IG+ G IV+ L+ + + I + S E
Sbjct: 32 DRDQFVIDS----EDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDE 87
Query: 319 RVVTI-------SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSIL 371
RV+TI ++LE SP Q A + R V + S G G V +L
Sbjct: 88 RVITIYSASNETNSLEESSDYVSPAQEALFKIHDRVVADDYMDEDSEG--GGHQVTARLL 145
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V +D +GC+ G G V + TG ++++ + + CA +D ++QISGE V+ AL
Sbjct: 146 VPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKAL 205
Query: 432 SEVVGRLRHN-LKSGEILNEARP 453
++ RL N +S +L A P
Sbjct: 206 YQIASRLHDNPSRSQHLLASAIP 228
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 214/467 (45%), Gaps = 67/467 (14%)
Query: 3 HHSNPYGYSSKRRGP--------LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDT 54
H + G +KRR P L DD V FR +CP +G +IGR G I+ +R DT
Sbjct: 15 HSDSDAGSKNKRRNPAADESSSSLITADDTV-FRYLCPVRKIGSVIGRGGDIVKQLRADT 73
Query: 55 KCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE 114
K +I PG D RV+ + S + F E D + VS Q+A+ RV +R+
Sbjct: 74 KAKIRIGDALPGCDERVVTI--HSSSEETNHFDETDDL-----VSPAQDALFRVHQRVIA 126
Query: 115 VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACA 171
+A + D + + V LL + +IG V+GKGG+ V +R E+GA+I +L P CA
Sbjct: 127 EDAREDEDEERNHVT-AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCA 185
Query: 172 AIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFF 231
D+L+QI+G VKKAL + ++ +P R
Sbjct: 186 LSTDELVQISGEAAVVKKALFQIAAQIR------------------------DNPSRSQH 221
Query: 232 PHLSLVP--PLTGNPSDNA------------SEFHSSSADADRD-HPGLDKKGRKQEVAL 276
S VP TG P A + + D R +P + +E ++
Sbjct: 222 LLASAVPGGYATGGPGAGAPIMGVAPFVGAYGGYKGDTGDWSRSLYPAPRDEASMREFSV 281
Query: 277 RMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPV 336
R + G+IGK GAI+ ++ SGA I + T+ + ++ IS E+ + SP
Sbjct: 282 RFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPT 341
Query: 337 QNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
AAV + R E VE G S +LV +GCL G G + V+EM +T
Sbjct: 342 IEAAVRLQPRCSEKVERDSGIVS-------FTTRLLVPTSRIGCLIGKGGTIVTEMRRLT 394
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+I+++ + + A+++D ++QISG+ ++AL + + RLR NL
Sbjct: 395 KANIRILSKDNLPKIASEDDEMVQISGDLDVAKDALVQALTRLRANL 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 240 LTGNPSDNASEFHSSSADAD------RDHPGLDKKGRK----QEVALRMLFSGWTASGII 289
+TG S HS S D+D R +P D+ + R L +I
Sbjct: 1 MTGQRSSYGKRSHSHS-DSDAGSKNKRRNPAADESSSSLITADDTVFRYLCPVRKIGSVI 59
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA-------LEYLDTRHSPVQNAAVL 342
G+ G IV+ L+ + A I L ERVVTI + + D SP Q+A
Sbjct: 60 GRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETDDLVSPAQDALFR 119
Query: 343 VFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
V R + + ++ N V +LV +D +GC+ G G V + TG I+++
Sbjct: 120 VHQRVIAEDAREDEDEERNH---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
Query: 403 GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-LKSGEILNEARP 453
+++ CA D ++QISGE V+ AL ++ ++R N +S +L A P
Sbjct: 177 KDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVP 228
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 139/478 (29%), Positives = 227/478 (47%), Gaps = 52/478 (10%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
G S+R L FR++ P + L+GR G +S IR +T I E PG D
Sbjct: 30 GSRSRRNQSFKLSPGYAVFRVLFPVSRIDSLVGRDGDGLSKIREETGVEIRVEDTIPGCD 89
Query: 69 HRVILVVGSGS------------IDRRIMFCENDVVV-----------------EGGEVS 99
R+ ++ GS ++ END + + EV+
Sbjct: 90 ERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDGDIAKLKKKEDKDSPPVEDAKQKEVT 149
Query: 100 STQ--EAVIRVFERMWEVEAEVEG-DGDGDDVA--YCGLLANTTKIGVVVGKGGRNVTRM 154
+Q +A+ V E++++ E E +G D +GD + LL ++++G ++GKGG V +M
Sbjct: 150 HSQLRKALFLVSEKIFDEEPEADGTDVEGDKLPTFILRLLVLSSQVGCLLGKGGSVVKQM 209
Query: 155 RIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICF 211
+SGA+I +LP P A + +L+QI+G VKKAL V L +K P+
Sbjct: 210 SSDSGAQIRILPRDKLPPFVATNVELVQISGGIDVVKKALELVFQQLIENPPNDKDPVAS 269
Query: 212 NRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPS--DNASEFHSSSAD-ADRDH----PG 264
+ + S S P S G S + FHSS+ A + + PG
Sbjct: 270 SNAAQSSRSSGQSLSRAHESPRGSSFNTHGGPYSVPRDVGNFHSSAPSLAPKQYEACIPG 329
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
K + ++ R+L +IGK GAIV++LQ +G I S +R++ ++
Sbjct: 330 RSKPSH-EILSYRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILVA 388
Query: 325 ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSG 384
+ D R SPVQ+A V AR V+ ++ ++K + LV ++ +GCL G G
Sbjct: 389 GPAHPDDRISPVQDAVFRVQARIVK-------AAADSKEQNLVARFLVSSNQIGCLLGKG 441
Query: 385 SSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
S ++EM TG I+++G EQ+ CA +++ V+QI+GE + VQ+A+ ++ RLRH+
Sbjct: 442 GSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDAMFQITTRLRHHF 499
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 218/460 (47%), Gaps = 40/460 (8%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
Y S+ + N D VV +R++CP+ V+G +IG+SG +I+ IR++T+ RI FPG
Sbjct: 29 YESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSE 88
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG--DGDD 127
RVI + S S + I+ E + + S Q A+++V + + A + D DD
Sbjct: 89 RVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDD 148
Query: 128 VAYCGLLANTTKIGVVVGKGG------RNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
C LL +++ +V+GK G R TR ++ +K V P CA D ++ I+
Sbjct: 149 FRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMIS 208
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G T +VKKAL AV+ + +S E+ P+ + +++V S +P L P
Sbjct: 209 GETESVKKALFAVSAIMYKVSPREQIPL--DTTVQEVPASIIIPSDLSIYPQAGLYPSQD 266
Query: 242 G--NPSDNASEFHSS----------------SADADRDHPGLDKKGRKQEVALRMLFSGW 283
N S F + SA A G R +++A++++ S
Sbjct: 267 SIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSS 326
Query: 284 TASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER-VVTISALEYLDTRHSPVQNAAVL 342
+IGK G ++ ++ ASG+ I T + V+T++A E D S + AVL
Sbjct: 327 KIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKS-MAVEAVL 385
Query: 343 VFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
+ + E + D V + +LV + +GC+ G S +SE+ T DI +
Sbjct: 386 LLQEKINDEDE----------DKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHIS 435
Query: 403 GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G CA ND +++ISGE NV++AL ++V RLR ++
Sbjct: 436 KGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDV 475
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 216/444 (48%), Gaps = 61/444 (13%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV------ 75
DDVV +R++CP +G +IG+ GSII S+R +T +I G PGSD RVI +
Sbjct: 44 DDVV-YRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERRE 102
Query: 76 -----GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
GS +D+ + E + ++QEA+ +VF R+ E E E + +V
Sbjct: 103 GKPRGGSKEMDKD----KEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRNVT- 157
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAV 187
LL + +IG ++GK G+ + +MR+ESGA+I +LP P CA D+L+ TG V
Sbjct: 158 ARLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDELL--TGELALV 215
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE--FFPHLSLVPPLTGNPS 245
KKAL ++T L N P +K + P +E P +L+PP P
Sbjct: 216 KKALTTISTRLYD-----------NPPRDKPPQAGHLGPFQESTILPG-TLLPPGAFFPQ 263
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
NAS E A+R+L +IGK G I+RS++ + A
Sbjct: 264 GNASIAPVEG-----------------EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCA 306
Query: 306 LISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
I A + + ERV+ I++ E L + SP A + + +R + S E G A
Sbjct: 307 RIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRISD-------PSAEKDG-A 358
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ LV + +GCL G S +++M T +I+++ E + CA ++D ++Q+ G+
Sbjct: 359 MTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAHEDDELVQVVGDIT 418
Query: 426 NVQNALSEVVGRLRHNLKSGEILN 449
++A+ E++ RLR N+ S + N
Sbjct: 419 VARDAVIEIITRLRANIFSEHMKN 442
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 218/460 (47%), Gaps = 40/460 (8%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
Y S+ + N D VV +R++CP+ V+G +IG+SG +I+ IR++T+ RI FPG
Sbjct: 29 YESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSE 88
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG--DGDD 127
RVI + S S + I+ E + + S Q A+++V + + A + D DD
Sbjct: 89 RVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDD 148
Query: 128 VAYCGLLANTTKIGVVVGKGG------RNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
C LL +++ +V+GK G R TR ++ +K V P CA D ++ I+
Sbjct: 149 FRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMIS 208
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G T +VKKAL AV+ + +S E+ P+ + +++V S +P L P
Sbjct: 209 GETESVKKALFAVSAIMYKVSPREQIPL--DTTVQEVPASIIIPSDLSIYPQAGLYPSQD 266
Query: 242 G--NPSDNASEFHSS----------------SADADRDHPGLDKKGRKQEVALRMLFSGW 283
N S F + SA A G R +++A++++ S
Sbjct: 267 SIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSS 326
Query: 284 TASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER-VVTISALEYLDTRHSPVQNAAVL 342
+IGK G ++ ++ ASG+ I T + V+T++A E D S + AVL
Sbjct: 327 KIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKS-MAVEAVL 385
Query: 343 VFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
+ + E + D V + +LV + +GC+ G S +SE+ T DI +
Sbjct: 386 LLQEKINDEDE----------DKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHIS 435
Query: 403 GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G CA ND +++ISGE NV++AL ++V RLR ++
Sbjct: 436 KGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDV 475
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 214/445 (48%), Gaps = 51/445 (11%)
Query: 12 SKRRGPLNL-------PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
SKRR P + P+D V FR +CPT +G +IG G I +R +T +I
Sbjct: 24 SKRRTPTDEKESNSIGPEDTV-FRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETI 82
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
PG + RV+ + SGS + + D++ S Q+A+ RV +R+ + ++ D +
Sbjct: 83 PGCEERVVTIY-SGSEETNVSEDTGDLI------SPAQDALFRVHDRVLAEDLRMDEDLE 135
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQIT 181
+L + +IG V+GKGG+ + +R E+GA+I +L P CA D+L+QIT
Sbjct: 136 DHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQIT 195
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSS--DPH--REFFPHLSLV 237
G VKKAL V L H + + P +F S + +PH + SL+
Sbjct: 196 GEGAVVKKALYQVAARL-HDNPSRSQHQLLSSP--SIFRSGAGFVNPHAGTQVMGVTSLM 252
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
P SD G K +E A+R++ +IGK G I++
Sbjct: 253 GPYASYKSD-----------------GRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIK 295
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
L+ SGA I + + + ++ +SA E + + SP +A + + RS E
Sbjct: 296 QLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSE-------K 347
Query: 358 SGENKGDAVAVS-ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV 416
+ + GDA+ + +LV + VGCL G G S ++EM + T I+++ E + A+++D
Sbjct: 348 TEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDE 407
Query: 417 VIQISGEYKNVQNALSEVVGRLRHN 441
++QI+G+ NAL +V+ RLR N
Sbjct: 408 MVQITGDANVATNALLQVLMRLRAN 432
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 252 HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
+S S + R P +K+ ++ R L IIG G I + L+ + + I
Sbjct: 18 YSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIR 77
Query: 309 FAAPLTKSGERVVTI-SALEYLDTRH------SPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+ + ERVVTI S E + SP Q+A V R + + E+
Sbjct: 78 ISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVHDRVL----AEDLRMDED 133
Query: 362 KGD--AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
D + V +LV +D +GC+ G G + + TG I+++ E + CA +D ++Q
Sbjct: 134 LEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQ 193
Query: 420 ISGEYKNVQNALSEVVGRLRHN 441
I+GE V+ AL +V RL N
Sbjct: 194 ITGEGAVVKKALYQVAARLHDN 215
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 221/471 (46%), Gaps = 83/471 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV-----VGSGS-- 79
FR++CP +G +IG+ GSII ++R+ T +I PGSD RVI++ G G
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 80 --------------IDRRIMFCENDVVVEGGEVS-STQEAVIRVFERMWEVEAEVEGDGD 124
D R M D G +V+ Q A+ +V R+ + + + D
Sbjct: 122 YPAGSGGGSAAALDKDDRAM----DEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDD 177
Query: 125 GDDV-------AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAID 174
D V +L ++G ++GK GR + +MR E+G++I +LP P CA
Sbjct: 178 SDSVEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPT 237
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYS--------NSSDP 226
D+++Q+ G +VK+AL A++T L ++ P +RP F S +S P
Sbjct: 238 DEVVQVVGDRPSVKRALNAISTRL-----LDNPP--KDRPSSASFQSGNFGGGSRSSGFP 290
Query: 227 HRE-FFP-HLSLVPP--LTGNPS----DNASEFHSSSADADRDHPGLDKKGR-------K 271
E + P H SL P L P DN + +A PGL + G
Sbjct: 291 ASEPYIPQHTSLAPQTRLRAEPRSDSGDNGYQLLRPTA------PGLSEFGTGRHLVPMD 344
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
+E+ R+L IIGK +++LQ +GA I+ + ERV+ +SA+E D
Sbjct: 345 EELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDD 401
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
SP Q A VF ++ G +S + V +LV ++ VGCL G G + +SEM
Sbjct: 402 DLSPAQEA---VFHIQDKLRDDGGETS-----ERVVTRLLVPSNHVGCLLGKGGNIISEM 453
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ T I+++ EQ+ CA ND V+Q+ GE + ++AL ++ RLR NL
Sbjct: 454 RNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANL 504
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 140/329 (42%), Gaps = 54/329 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D+ + FR++CP+ +G +IG+ I +++ +T +I+ PG + RVI+V S D
Sbjct: 344 DEELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPD 400
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
++S QEAV + +++ + G+ + LL + +G
Sbjct: 401 --------------DDLSPAQEAVFHIQDKLRD------DGGETSERVVTRLLVPSNHVG 440
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++GKGG ++ MR + A I +L P CA +D+++Q+ G + ALV +T+ L
Sbjct: 441 CLLGKGGNIISEMRNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRL 500
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL-------------TGNPS 245
+ EK+ + Y S+ P F S P + T +
Sbjct: 501 RANLYREKTDRS-----DDYGYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQTERGA 555
Query: 246 DNASEFHSSSADADRDH----------PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAI 295
N +S A +R + GL + +L T S ++G+ G
Sbjct: 556 YNGLPRLTSYAGIERSYGLAGDRSALPTGLTNLSVVTSTKIDVLIPEVTFSAVLGQNGDN 615
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTIS 324
+ + SGA ++ A T +G+R++ IS
Sbjct: 616 LTQISKMSGAKVTLADGCTATGDRLIEIS 644
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/467 (29%), Positives = 219/467 (46%), Gaps = 75/467 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV-----VGSGSID 81
FR++CP +G +IG+ GSII ++R+ T +I PGSD RVI++ G G D
Sbjct: 2 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 61
Query: 82 RRIMFCEN------------DVVVEGGEVSS-TQEAVIRVFERMWEVEAEVEGDGDGDDV 128
D G +V+ Q A+ +V R+ + + + D D V
Sbjct: 62 YPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 121
Query: 129 -------AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLI 178
+L ++G ++GK GR + +MR E+G++I +LP P CA D+++
Sbjct: 122 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 181
Query: 179 QITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYS--------NSSDPHRE- 229
Q+ G +VK+AL A++T L ++ P +RP F S +S P E
Sbjct: 182 QVVGDRPSVKRALNAISTRL-----LDNPPK--DRPSSASFQSGNFGGGSRSSGFPASEP 234
Query: 230 FFP-HLSLVPP--LTGNPS----DNASEFHSSSADADRDHPGLDKKGR-------KQEVA 275
+ P H SL P L P DN + +A PGL + G +E+
Sbjct: 235 YIPQHTSLAPQTRLRAEPRSDSGDNGYQLLRPTA------PGLSEFGTGRHLVPMDEELV 288
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R+L IIGK +++LQ +GA I+ + ERV+ +SA+E D SP
Sbjct: 289 FRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSP 345
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
Q A VF ++ G +S + V +LV ++ VGCL G G + +SEM + T
Sbjct: 346 AQEA---VFHIQDKLRDDGGETS-----ERVVTRLLVPSNHVGCLLGKGGNIISEMRNST 397
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
I+++ EQ+ CA ND V+Q+ GE + ++AL ++ RLR NL
Sbjct: 398 RAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRLRANL 444
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 93/189 (49%), Gaps = 26/189 (13%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D+ + FR++CP+ +G +IG+ I +++ +T +I+ PG + RVI+V S D
Sbjct: 284 DEELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPD 340
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
++S QEAV + +++ + G+ + LL + +G
Sbjct: 341 --------------DDLSPAQEAVFHIQDKL------RDDGGETSERVVTRLLVPSNHVG 380
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++GKGG ++ MR + A I +L P CA +D+++Q+ G + ALV +T+ L
Sbjct: 381 CLLGKGGNIISEMRNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDALVQITSRL 440
Query: 199 QHLSTMEKS 207
+ EK+
Sbjct: 441 RANLYREKT 449
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 216/446 (48%), Gaps = 53/446 (11%)
Query: 12 SKRRGPLNL-------PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
SKRR P + P+D V FR +CPT +G +IG G I +R +T +I
Sbjct: 24 SKRRTPTDEKESNSIGPEDTV-FRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETI 82
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDG 123
PG + RV+ + SGS E +V + G+ +S Q+A+ RV +R+ + ++ D
Sbjct: 83 PGCEERVVTIY-SGSE-------ETNVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDL 134
Query: 124 DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQI 180
+ +L + +IG V+GKGG+ + +R E+GA+I +L P CA D+L+QI
Sbjct: 135 EDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQI 194
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSS--DPH--REFFPHLSL 236
TG VKKAL V L H + + P +F S + +PH + SL
Sbjct: 195 TGEGAVVKKALYQVAARL-HDNPSRSQHQLLSSP--SIFRSGAGLVNPHAGTQVMGVTSL 251
Query: 237 VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIV 296
+ P SD G + +E A+R++ +IGK G I+
Sbjct: 252 MGPYASYKSD-----------------GRSRSSSVKEFAVRLVCPTENVGAVIGKGGGII 294
Query: 297 RSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
+ L+ SGA I + + + ++ +SA E + + SP +A + + RS E
Sbjct: 295 KQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSE------- 346
Query: 357 SSGENKGDAVAVS-ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
+ + GDA+ + +LV + VGCL G G S ++EM + T I+++ E + A+++D
Sbjct: 347 KTEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDD 406
Query: 416 VVIQISGEYKNVQNALSEVVGRLRHN 441
++QI+G+ NAL +V+ RLR N
Sbjct: 407 EMVQITGDANVAANALLQVLMRLRAN 432
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 252 HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
+S S + R P +K+ ++ R L IIG G I + L+ + + I
Sbjct: 18 YSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIR 77
Query: 309 FAAPLTKSGERVVTI-SALEYLDTRH------SPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+ + ERVVTI S E + SP Q+A V R + + E+
Sbjct: 78 ISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVHDRVL----AEDLRMDED 133
Query: 362 KGD--AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
D + V +LV +D +GC+ G G + + TG I+++ E + CA +D ++Q
Sbjct: 134 LEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQ 193
Query: 420 ISGEYKNVQNALSEVVGRLRHN 441
I+GE V+ AL +V RL N
Sbjct: 194 ITGEGAVVKKALYQVAARLHDN 215
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 164/521 (31%), Positives = 250/521 (47%), Gaps = 77/521 (14%)
Query: 12 SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRV 71
SK + +N P V FR++CP GG+IG+ G+IIS IR++T ++ E PGSD RV
Sbjct: 23 SKLQKTVNSPVRGVVFRILCPASKTGGIIGKGGAIISQIRQETGAKVRVEETVPGSDERV 82
Query: 72 ILV--------------------------VGSGSIDRRIMFCEND-----VVVEGG---- 96
+++ VG S ++ E+D V VE
Sbjct: 83 VIIAAGSDKEMEVNNAEQNRGDSDDKEPNVGEESNGKQAGSDEDDENKETVSVEHSTKSV 142
Query: 97 -EVSSTQEAVIRVFERMWEVEAEV-EGDGDGDD--VAYCGLLANTTKIGVVVGKGGRNVT 152
E SS Q+A++ VFERM E E E+ EG+ + ++ LL ++++G ++GKGG +
Sbjct: 143 RETSSLQKALVLVFERMLEAEPEMDEGNEEKKKPSMSTLRLLVLSSQVGCLLGKGGSVIK 202
Query: 153 RMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPI 209
+M ESGA+I +LP P CA+ D+L+QI G A++KAL +V L L K P
Sbjct: 203 QMSAESGAQIRILPRDKLPICASPTDELVQIAGEVDAIRKALQSVAQQL--LENPPKDPE 260
Query: 210 CFNRPIEKVFYSNSSD---PHREFFPHLSLVPPLTGNPSDNAS---------EFHSSSAD 257
+ PI S+S P E +P PP S NA EFH
Sbjct: 261 AYP-PISTGPSSHSFGHPLPRPEAYP-----PPYH---SFNARGTTYGAGPREFHEGGMP 311
Query: 258 ADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG 317
R P D + R+L G+IGK GAI+++LQ +G I ++ S
Sbjct: 312 G-RMRPAPDM------LTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSE 364
Query: 318 ERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFV 377
+R++ IS + D R S Q+A + V R + E K AV +LV ++ +
Sbjct: 365 DRIILISGPAHPDDRISAAQDAVLRVQTRIA-----RALPLPEGKEKAVIGRLLVSSNQI 419
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
GCL G G + ++EM TG I+++G +Q+ CA++N+ V+QI+GE++ VQ AL ++ R
Sbjct: 420 GCLLGKGGAIMAEMRKSTGAYIRILGKDQIPKCASENEEVVQINGEHEVVQEALLQITTR 479
Query: 438 LRHNLKSGEILNEARPRSPSGRVGGPALHKLHQSVALSPEF 478
LR++ + P +P+ P LSP F
Sbjct: 480 LRNHFFRDVFPSIDHPSNPAFLDQAPPFPPYMGRRELSPPF 520
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 59/242 (24%)
Query: 259 DRDHPGLDKKGRKQE--------VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
DR+H + K + Q+ V R+L GIIGK GAI+ ++ +GA +
Sbjct: 13 DRNHTETNGKSKLQKTVNSPVRGVVFRILCPASKTGGIIGKGGAIISQIRQETGAKVRVE 72
Query: 311 APLTKSGERVVTISA------------------------------------------LEY 328
+ S ERVV I+A E
Sbjct: 73 ETVPGSDERVVIIAAGSDKEMEVNNAEQNRGDSDDKEPNVGEESNGKQAGSDEDDENKET 132
Query: 329 LDTRH--------SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA-VSILVGADFVGC 379
+ H S +Q A VLVF R +E E + + E K +++ + +LV + VGC
Sbjct: 133 VSVEHSTKSVRETSSLQKALVLVFERMLEAEPEMDEGNEEKKKPSMSTLRLLVLSSQVGC 192
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
L G G S + +M +G I+++ +++ CA+ D ++QI+GE ++ AL V +L
Sbjct: 193 LLGKGGSVIKQMSAESGAQIRILPRDKLPICASPTDELVQIAGEVDAIRKALQSVAQQLL 252
Query: 440 HN 441
N
Sbjct: 253 EN 254
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 204/437 (46%), Gaps = 40/437 (9%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
++L D V +R VCP +G +IGR G I+ +R +TK +I PG + RV+ +
Sbjct: 37 IDLEDTV--YRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSP 94
Query: 78 GSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
E + V GG VS Q+A+ +V +R+ + + D DG LL
Sbjct: 95 SD--------ETNAVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVP 146
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVA 193
+ +IG V+GKGG V +R E+GA+I +L P CA D+L+QITG VKKAL
Sbjct: 147 SDQIGCVIGKGGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQ 206
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSS-------DPHREFFPHLSLVPPLTGNPSD 246
+ + L +S + V+ + S P P LV G D
Sbjct: 207 IASRLH--DNPSRSQHLLTSAVPGVYPAGGSLIGPGAGAPIVGIAP---LVGAYGGYKGD 261
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
S A RD + +E ++R++ G+IGK G I+ ++ SGA
Sbjct: 262 TGDWPPRSMYSAPRD------EASTKEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGAT 315
Query: 307 ISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDA 365
I + T+ E ++ IS E+ + SP AAV + R E VE G S
Sbjct: 316 IKVDSSTTEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEKVERDSGIIS------- 368
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+LV +GCL G G S ++EM +T +I+++ E + A+++D ++QISG+
Sbjct: 369 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDDEMVQISGDLD 428
Query: 426 NVQNALSEVVGRLRHNL 442
++AL V+ RLR NL
Sbjct: 429 IAKDALVHVLTRLRANL 445
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 10/190 (5%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI-------S 324
++ R + G +IG+ G IV+ L+ + A I + ERVVTI +
Sbjct: 40 EDTVYRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETN 99
Query: 325 ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSG 384
A+E SP Q+A V R V + + V +LV +D +GC+ G G
Sbjct: 100 AVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQ--QVTAKLLVPSDQIGCVIGKG 157
Query: 385 SSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-LK 443
S V + TG I+++ + + CA +D ++QI+G+ V+ AL ++ RL N +
Sbjct: 158 GSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSR 217
Query: 444 SGEILNEARP 453
S +L A P
Sbjct: 218 SQHLLTSAVP 227
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 212/464 (45%), Gaps = 73/464 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D + FRL+CP V SI+ +R RIH + P + +LV+ +GS
Sbjct: 65 PSDTL-FRLLCPASKVS-------SILRHLRDIPGARIHVDEPLPSCE-ECVLVILAGSP 115
Query: 81 DRRIM--------FCENDV-------VVEGG--EVSSTQEAVIRVFE---RMWEVEAEVE 120
+ F E+DV V G E S Q+A++R FE RM E E +
Sbjct: 116 SKPAHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQ 175
Query: 121 ---------------GDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
G+ D + C LLA + ++G V+G+GG+ V ++R ES A + +
Sbjct: 176 EIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIF 235
Query: 166 PP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSN 222
P PACA+ D+LIQI+G AV KAL +V++CLQ ++ S + + +++
Sbjct: 236 PKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTSHAS 295
Query: 223 S-------SDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVA 275
S P R + H + +D S +SS + G + +++V
Sbjct: 296 SMSVQDEEPSPRRRYGSHHN---------ADYRSRSYSSIPGHENAGAG-PRAAMEEDVV 345
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R+L +IGK G +VR+LQN +GA I ER+V ISA E L+ +SP
Sbjct: 346 FRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVD-TPDLDERLVVISARETLEQTYSP 404
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
Q A + R E+ G G AV +LV +G L G G +++M T
Sbjct: 405 AQEAVIRAHCRIAEI--------GYEPGAAVVARLLVHGQQIGYLVGRGGHIINDMRRGT 456
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
GT I++ +Q+ +D V+Q+ G +VQ+AL + R+R
Sbjct: 457 GTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIR 500
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
G+ + GP ++ V FRL+C VG LIG+ G+++ +++ +T I
Sbjct: 328 GHENAGAGPRAAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIK--------- 378
Query: 69 HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV 128
+V + +D R++ +E S QEAVIR R+ E+ E
Sbjct: 379 -----IVDTPDLDERLVVISARETLE-QTYSPAQEAVIRAHCRIAEIGYEPGA------A 426
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC---AAIDDQLIQITGATL 185
LL + +IG +VG+GG + MR +G I + P + D+++Q+ G
Sbjct: 427 VVARLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLP 486
Query: 186 AVKKALVAVTTCLQ 199
+V+ AL +T ++
Sbjct: 487 SVQDALFHITNRIR 500
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 212/464 (45%), Gaps = 73/464 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D + FRL+CP V SI+ +R RIH + P + +LV+ +GS
Sbjct: 65 PSDTL-FRLLCPASKVS-------SILRHLRDIPGARIHVDEPLPSCE-ECVLVILAGSP 115
Query: 81 DRRIM--------FCENDV-------VVEGG--EVSSTQEAVIRVFE---RMWEVEAEVE 120
+ F E+DV V G E S Q+A++R FE RM E E +
Sbjct: 116 SKPTHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQ 175
Query: 121 ---------------GDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
G+ D + C LLA + ++G V+G+GG+ V ++R ES A + +
Sbjct: 176 EIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIF 235
Query: 166 PP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSN 222
P PACA+ D+LIQI+G AV KAL +V++CLQ ++ S + + +++
Sbjct: 236 PKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTSHAS 295
Query: 223 S-------SDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVA 275
S P R + H + +D S +SS + G + +++V
Sbjct: 296 SMSVQDEEPSPRRRYGSHHN---------ADYRSRSYSSIPGHENAGAG-PRAAMEEDVV 345
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R+L +IGK G +VR+LQN +GA I ER+V ISA E L+ +SP
Sbjct: 346 FRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVD-TPDLDERLVVISARETLEQTYSP 404
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
Q A + R E+ G G AV +LV +G L G G +++M T
Sbjct: 405 AQEAVIRAHCRIAEI--------GYEPGAAVVARLLVHGQQIGYLVGRGGHIINDMRRGT 456
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
GT I++ +Q+ +D V+Q+ G +VQ+AL + R+R
Sbjct: 457 GTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIR 500
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
G+ + GP ++ V FRL+C VG LIG+ G+++ +++ +T I
Sbjct: 328 GHENAGAGPRAAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIK--------- 378
Query: 69 HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV 128
+V + +D R++ +E S QEAVIR R+ E+ E
Sbjct: 379 -----IVDTPDLDERLVVISARETLE-QTYSPAQEAVIRAHCRIAEIGYEPGA------A 426
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC---AAIDDQLIQITGATL 185
LL + +IG +VG+GG + MR +G I + P + D+++Q+ G
Sbjct: 427 VVARLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLP 486
Query: 186 AVKKALVAVTTCLQ 199
+V+ AL +T ++
Sbjct: 487 SVQDALFHITNRIR 500
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 208/440 (47%), Gaps = 39/440 (8%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
Y R L + D FR +CP +G +IGR G I+ +R DT+ +I PG D
Sbjct: 35 YRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDE 94
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
RVI + D F + + V +S Q+A+ R+ +R+ +A E +G+
Sbjct: 95 RVITIYSPS--DETNAFGDGEKV-----LSPAQDALFRIHDRVVADDARSEDSPEGEKQV 147
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLA 186
LL + +IG ++G+GG+ V +R E+GA+I ++ P CA D+LIQI+G L
Sbjct: 148 TAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLI 207
Query: 187 VKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFF-----PHLSLVPPLT 241
VKKAL+ + + L + + + S+ P P L + PL
Sbjct: 208 VKKALLQIASRLHENPSRS----------QNLLSSSGGYPAGSLMSHAGGPRLVGLAPLM 257
Query: 242 GNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQN 301
G+ +A ++ R+ P E +R++ + +IGK GA++ L+
Sbjct: 258 GSYGRDAGDWSRPLYQPPRNDPP------ATEFFIRLVSPVENIASVIGKGGALINQLRQ 311
Query: 302 ASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR-SVEVEGQQGFSSGE 360
+ A I + T+ + ++TISA E + +SP A + + + S +VE G S
Sbjct: 312 ETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVS-- 369
Query: 361 NKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQI 420
+LV + +GC+ G G + ++EM +T +I+++G E + A+ +D ++Q+
Sbjct: 370 -----FTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQV 424
Query: 421 SGEYKNVQNALSEVVGRLRH 440
+ ++ +L ++ RLR+
Sbjct: 425 NFMVLLLKFSLQFLLSRLRY 444
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
DRD +D+ + R L +IG+ G IV+ L+N + + I + E
Sbjct: 39 DRDSLVIDR----DDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDE 94
Query: 319 RVVTI-------SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS-SGENKGDAVAVSI 370
RV+TI +A + SP Q+A + R V + + S GE + V +
Sbjct: 95 RVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQ---VTAKL 151
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
LV +D +GC+ G G V + TG I++V + CA +D +IQISGE V+ A
Sbjct: 152 LVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKA 211
Query: 431 LSEVVGRLRHNLKSGEILNEARPRSPSGRV----GGPAL 465
L ++ RL N + L + P+G + GGP L
Sbjct: 212 LLQIASRLHENPSRSQNLLSSSGGYPAGSLMSHAGGPRL 250
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 22/200 (11%)
Query: 17 PLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
P N P F RLV P + +IG+ G++I+ +R++T+ I + + +I
Sbjct: 275 PRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLI--- 331
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLA 135
+I R +F + S T EAV+R+ + + +VE D G LL
Sbjct: 332 ---TISAREVFED--------AYSPTIEAVMRLQPKCSD---KVERDS-GLVSFTTRLLV 376
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALV 192
+++IG ++GKGG +T MR + A I +L P A+ DD+++Q+ L +K +L
Sbjct: 377 PSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQVNFMVLLLKFSLQ 436
Query: 193 AVTTCLQHLSTMEKSPICFN 212
+ + L++ + S F+
Sbjct: 437 FLLSRLRYFTWSVNSNSNFD 456
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 216/460 (46%), Gaps = 40/460 (8%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
Y S+ + N D VV +R++CP+ V+G +IG+SG +I+ IR++T+ RI FPG
Sbjct: 29 YESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSE 88
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG--DGDD 127
RVI + S S + I+ E + + S Q A+++V + + A + D DD
Sbjct: 89 RVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDD 148
Query: 128 VAYCGLLANTTKIGVVVGKGG------RNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
C LL +++ +V+GK G R TR ++ +K P CA D ++ I+
Sbjct: 149 FRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMIS 208
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL- 240
G T +VKKAL AV+ + +S E+ P+ + +++V S +P L P
Sbjct: 209 GETESVKKALFAVSAIMYKVSPREQIPL--DTTVQEVPASIIIPSDLSIYPQAGLYPSQD 266
Query: 241 -----------------TGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGW 283
G + A+ SA A G R +++A++++ +
Sbjct: 267 SIFQHGANVSSFIGTLPQGYGENAANPLPVFSASALPVVHGFGGSSRSEKLAIKVICASS 326
Query: 284 TASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER-VVTISALEYLDTRHSPVQNAAVL 342
+IGK G ++ ++ ASG+ I T + V+T++A E D S + AVL
Sbjct: 327 KIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKS-MAVEAVL 385
Query: 343 VFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
+ + E + D V + +LV + +GC+ G S +SE+ T DI +
Sbjct: 386 LLQEKINDEDE----------DKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHIS 435
Query: 403 GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G A ND +++ISGE NV++AL ++V RLR ++
Sbjct: 436 KGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDV 475
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 203/427 (47%), Gaps = 38/427 (8%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP +G +IGR G II +R DTK +I PG + RV+ +
Sbjct: 44 YRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSD------- 96
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
N+ G +S Q+A+ RV +++ + +VE D +G LL + +IG ++GK
Sbjct: 97 ETNEYEDSGNYISPAQDALFRVHDKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGK 156
Query: 147 GGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL----- 198
GG+ V +R E+GA I +L P CA D+L+QI+G +KKAL + + L
Sbjct: 157 GGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPS 216
Query: 199 --QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
QHL + P ++ + + +++ P P + G+ D + +S
Sbjct: 217 RSQHL-LVSAVPNVYS-SVGSLVGPSAAAPIVGIAPLMGPYGGFKGDTGDWSRSLYS--- 271
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKS 316
A RD +E +LR++ +IGK G I+ ++ SGA I + + +
Sbjct: 272 -APRDELA------SKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEG 324
Query: 317 GERVVTISALEYLDTRHSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGAD 375
+ ++TISA E D +SP AAV + R E +E G S +LV +
Sbjct: 325 DDCLITISAKEIYD-HYSPTIEAAVRLQPRCSEKMERDSGLIS-------FTTRLLVPSS 376
Query: 376 FVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVV 435
+GCL G G + + EM +T I++ E + A+ +D ++QI+G+ ++AL ++
Sbjct: 377 RIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQIS 436
Query: 436 GRLRHNL 442
RLR N+
Sbjct: 437 RRLRANV 443
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL----- 326
Q+ R L IIG+ G I++ L+ + + I + ERVVTI +
Sbjct: 40 QDTVYRYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETN 99
Query: 327 EYLDTRH--SPVQNAAVLVFARSVEVEGQ-QGFSSGENKGDAVAVSILVGADFVGCLTGS 383
EY D+ + SP Q+A V + + + Q + S G + V +LV +D +GC+ G
Sbjct: 100 EYEDSGNYISPAQDALFRVHDKVIAEDLQVEDDSEGSPQ---VTAKLLVPSDQIGCIIGK 156
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-L 442
G V + TG I+++ E + CA +D ++QISGE ++ AL ++ RL N
Sbjct: 157 GGQIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPS 216
Query: 443 KSGEILNEARPR--SPSGRVGGPA 464
+S +L A P S G + GP+
Sbjct: 217 RSQHLLVSAVPNVYSSVGSLVGPS 240
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R+VCPT +G +IG+ G+II+ IR+++ I + D +I + D
Sbjct: 283 SLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYD---- 338
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
S T EA +R+ R E ++E D G LL +++IG ++G
Sbjct: 339 -----------HYSPTIEAAVRLQPRCSE---KMERDS-GLISFTTRLLVPSSRIGCLLG 383
Query: 146 KGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
KGG + MR + A I+ +P P A+ DD+++QI G K AL+ ++ L+
Sbjct: 384 KGGAIIDEMRKLTKA-IIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLR 440
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 224/447 (50%), Gaps = 42/447 (9%)
Query: 12 SKRRGPLNL-----PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPG 66
SKRR P + PDD V +R +C + +G +IGR G I +R +T+ +I PG
Sbjct: 21 SKRRNPGDDTYAPGPDDTV-YRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPG 79
Query: 67 SDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD 126
D RV+ + + I E+ EV Q+A+ RV ER+ E G+ D +
Sbjct: 80 CDERVVTIFSTSRKTNTIDGAED-------EVCPAQDALFRVHERLASDEGL--GNEDSE 130
Query: 127 DVA---YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQI 180
+++ LL + +IG ++GKGG+ + +R E+GA+I +L PACA D+L+QI
Sbjct: 131 EISPQVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSNDHIPACAISGDELLQI 190
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEK----SPICFNRPIEKVFYSNSSDPHREFFPHLSL 236
+G T+ V+KAL V++ L + + + S + P +S+ P P +
Sbjct: 191 SGDTVVVRKALHQVSSRLHNNPSKSQHLLASSLTQPYPGSTHLGGSSTAPVVGITP---V 247
Query: 237 VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIV 296
+PP G D A ++ S P D+ K E +LR+L + G+IGK G I+
Sbjct: 248 IPPYGGYKGDVAGDWPSLY------QPRRDESSAK-EFSLRLLCAAANVGGVIGKGGGII 300
Query: 297 RSLQNASGALISFAAPLTKSGER-VVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
+ ++ SGALI A+ + + ++T+SA E+ + SP +AAV + R E
Sbjct: 301 KQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCSEK----- 355
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
S E+ + +LV +GCL G G S ++E+ + +++++ E V AA++D
Sbjct: 356 -SDLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRILSKENVPKVAAEDD 414
Query: 416 VVIQISGEYKNVQNALSEVVGRLRHNL 442
++QI+G +NAL ++ RL+ N
Sbjct: 415 EMVQITGGLDVARNALVQIATRLKANF 441
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 207/425 (48%), Gaps = 32/425 (7%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR +CP +G +IGR G I+ +R +TK +I PG D RV+ V S
Sbjct: 49 FRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSD------- 101
Query: 87 CENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
E + V +G + VS ++A+ ++ +R+ + + + +G LL + +IG V+G
Sbjct: 102 -ETNTVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLG 160
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
KGG+ V +R E+GA+I +L PACA D+L+QI+G VKKAL + + L H
Sbjct: 161 KGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHH-- 218
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHL----SLVPPLTGNPSDNASEFHSSSADA 258
++ + V+ S S P + LV P G SD S A
Sbjct: 219 NPSRTQHLLGSAVPSVYPSGGSLMGPTAGPPIVGMAPLVGPYGGYKSDTGDWPPRSMYSA 278
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
RD K E ++R++ G+IGK G I+ ++ SGA I + K +
Sbjct: 279 PRDEISSSK-----EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSS-AKGDD 332
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFV 377
++TIS E+ + SP AAVL+ R E E G S +LV + +
Sbjct: 333 CLITISTKEFFEETFSPTVEAAVLLQPRCSEKSERDSGIIS-------FTTRLLVSSSRI 385
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
GCL G G S ++EM +T ++I+++ E + A+ +D ++QISG+ ++AL +V+ R
Sbjct: 386 GCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTR 445
Query: 438 LRHNL 442
LR NL
Sbjct: 446 LRANL 450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI------- 323
K++ R L G IIG+ G IV+ L+ + A I + ERVVT+
Sbjct: 44 KEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDET 103
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ ++ D SP ++A + R V + E G V +LV +D +GC+ G
Sbjct: 104 NTVDDGDKLVSPAEDALFKIHDRVVAEDLHS--DQEEEGGPQVNAKLLVPSDQIGCVLGK 161
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-L 442
G V + TG I+++ + V CA ++D ++QISG+ V+ AL ++ RL HN
Sbjct: 162 GGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPS 221
Query: 443 KSGEILNEARPR-SPSG 458
++ +L A P PSG
Sbjct: 222 RTQHLLGSAVPSVYPSG 238
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 199/425 (46%), Gaps = 32/425 (7%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R VCP +G +IGR G I+ +R +TK +I PG + RV+ + G
Sbjct: 44 YRYVCPGRKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSD------- 96
Query: 87 CENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
E + V GG VS Q+A+ +V +R+ + + D DG LL + +IG V+G
Sbjct: 97 -ETNAVEGGGNYVSPAQDALFKVHDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIG 155
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
KGG V +R E+GA+I +L P CA D+L+QITG VKKAL + + L
Sbjct: 156 KGGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLH--D 213
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN----PSDNASEFHSSSADA 258
+S + V+ + S + + PL G+ D S A
Sbjct: 214 NPSRSQHLLTSAVSGVYPAGGSLIGPGAGAPIVGIAPLVGSYGGYKGDTGDWPPRSMYSA 273
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
RD + +E ++R++ G+IGK G I+ ++ SGA I + + E
Sbjct: 274 PRD------EASSKEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDE 327
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFV 377
++ IS E+ + SP AAV + R E VE G S +LV +
Sbjct: 328 CLIAISTKEFFEETFSPTIEAAVRLQPRCSEKVERDSGIIS-------FTTRLLVPTTRI 380
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
GCL G G S +++M +T +I+++ E + A ++D ++QISG+ ++AL V+ R
Sbjct: 381 GCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTR 440
Query: 438 LRHNL 442
LR NL
Sbjct: 441 LRANL 445
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 21/177 (11%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S RLVCPT +GG+IG+ G II+ IR+D+ I + D +I +I +
Sbjct: 284 SVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDECLI------AISTKEF 337
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
F E S T EA +R+ R E +VE D G LL TT+IG ++G
Sbjct: 338 FEET--------FSPTIEAAVRLQPRCSE---KVERD-SGIISFTTRLLVPTTRIGCLIG 385
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
KGG +T MR + A I ++ P A DD+++QI+G K ALV V T L+
Sbjct: 386 KGGSIITDMRRLTKANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVLTRLR 442
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 14/210 (6%)
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
P + + DN + D DR+ +D ++ R + G +IG+ G IV+
Sbjct: 12 PHSQSDHDNGPNKRRNHGD-DREQFVIDS----EDTVYRYVCPGRKIGSVIGRGGEIVKQ 66
Query: 299 LQNASGALISFAAPLTKSGERVVTI-------SALEYLDTRHSPVQNAAVLVFARSVEVE 351
L+ + A I + ERVVTI +A+E SP Q+A V R V +
Sbjct: 67 LRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVSPAQDALFKVHDRVVAED 126
Query: 352 GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA 411
+ V +LV +D +GC+ G G S V + TG I+++ + + CA
Sbjct: 127 FHGDQDDDGGQ--QVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDHLPMCA 184
Query: 412 AQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+D ++QI+G+ V+ AL ++ RL N
Sbjct: 185 LSSDELVQITGDAAVVKKALYQIASRLHDN 214
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 193/431 (44%), Gaps = 81/431 (18%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
+R P PD V FR+VCP + G + D G++ RV+
Sbjct: 9 RRHAPPAAPDAV--FRIVCPAAKTADVAAIGGDGAKILVED----------LVGAEERVV 56
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG 132
++VG + S+ Q A+IRV ER + E + + C
Sbjct: 57 VIVG--------------------DESAAQVALIRVLERTMDEETK-------NSTVSCK 89
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKAL 191
L+A + ++G V+G+GG+ V ++R +SGA I +LP D+ IQITG AVKKA+
Sbjct: 90 LVAPSYQVGCVLGRGGKIVEKIRQDSGAHIRVLPKDQPPPPPGDEFIQITGNFGAVKKAV 149
Query: 192 VAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEF 251
++V+ CL + + F P +G S +
Sbjct: 150 LSVSACLH------------------------ENNYGAFKP--------SGGGSYAPPDH 177
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
HS A ++ + ++EV ++L +IGK G++VR+LQN +GA I
Sbjct: 178 HSRGAYSESAGHSSHRMFVEEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVE 237
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSIL 371
S ERVV ISA E + +HSP Q A + V R E+ GF AV +L
Sbjct: 238 AGPDSDERVVVISAQETSEQKHSPAQEAVIRVHCRLTEI----GFEPSA----AVVAKLL 289
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V + VGCL G G +SEM TG I++ EQ+ +QN+ V+Q+ G ++VQ+AL
Sbjct: 290 VRSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQI-KYISQNEEVVQVIGSLQSVQDAL 348
Query: 432 SEVVGRLRHNL 442
+ R+R +
Sbjct: 349 FHITNRIRETI 359
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 126/283 (44%), Gaps = 48/283 (16%)
Query: 4 HSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG 63
+S G+SS R + + ++VV F+L+C VG LIG+ GS++ +++ +T I
Sbjct: 183 YSESAGHSSHR---MFVEEEVV-FKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEA 238
Query: 64 FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
P SD RV+++ + +++ S QEAVIRV R+ E+ E
Sbjct: 239 GPDSDERVVVISAQETSEQKH--------------SPAQEAVIRVHCRLTEIGFEPSA-- 282
Query: 124 DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAI--DDQLIQIT 181
LL + ++G ++GKGG ++ MR +GA I + I +++++Q+
Sbjct: 283 ----AVVAKLLVRSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQIKYISQNEEVVQVI 338
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSP----------------ICFNRPIEKVFYSNSSD 225
G+ +V+ AL +T ++ ++P RP + S
Sbjct: 339 GSLQSVQDALFHITNRIRETIFPIRTPPNFSAPPHFPPFPEMPPPLFRPRNHLMSSGHPP 398
Query: 226 PHREFFPH-LSLVPPLTGNPSDNASEFHSSSADADRDHPGLDK 267
P + PH S VPP+ P D+ + H+ R P +D+
Sbjct: 399 PPQVGHPHDHSTVPPM---PVDH--QQHAFVHGMGRGPPNMDR 436
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 207/425 (48%), Gaps = 32/425 (7%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR +CP +G +IGR G I+ +R +TK +I PG D RV+ V S
Sbjct: 49 FRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSD------- 101
Query: 87 CENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
E + V +G + VS ++A+ ++ +R+ + + + +G LL + +IG V+G
Sbjct: 102 -ETNTVDDGDKLVSPAEDALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLG 160
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
KGG+ V +R E+GA+I +L PACA D+L+QI+G VKKAL + + L H
Sbjct: 161 KGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHH-- 218
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHL----SLVPPLTGNPSDNASEFHSSSADA 258
++ + V+ S S P + LV P G SD S A
Sbjct: 219 NPSRTQHLLGSAVPSVYPSGGSLMGPTAGPPIVGMAPLVGPYGGYKSDTGDWPPRSMYSA 278
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
RD K E ++R++ G+IGK G I+ ++ SGA I + K +
Sbjct: 279 PRDEISSSK-----EFSVRLVCPTGNLGGVIGKGGGIINQIRQDSGATIKVDSS-AKGDD 332
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFV 377
++TIS E+ + SP AAVL+ R E E G S +LV + +
Sbjct: 333 CLITISTKEFFEETFSPTVEAAVLLQPRCSEKSERDSGIIS-------FTTRLLVSSSRI 385
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
GCL G G S ++EM +T ++I+++ E + A+ +D ++QISG+ ++AL +V+ R
Sbjct: 386 GCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAKDALVQVLTR 445
Query: 438 LRHNL 442
LR NL
Sbjct: 446 LRANL 450
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 11/197 (5%)
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI------- 323
K++ R L G IIG+ G IV+ L+ + A I + ERVVT+
Sbjct: 44 KEDTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDET 103
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ ++ D SP ++A + R V + E G V +LV +D +GC+ G
Sbjct: 104 NTVDDGDKLVSPAEDALFKIHDRVVAEDLHS--DQEEEGGPQVNAKLLVPSDQIGCVLGK 161
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-L 442
G V + TG I+++ + V CA ++D ++QISG+ V+ AL ++ RL HN
Sbjct: 162 GGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPS 221
Query: 443 KSGEILNEARPR-SPSG 458
++ +L A P PSG
Sbjct: 222 RTQHLLGSAVPSVYPSG 238
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 197/433 (45%), Gaps = 91/433 (21%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
+R P PD V FR+VCP +++I G D I
Sbjct: 9 RRHAPPAAPDAV--FRIVCP--------AAKTEDVATI---------------GGDGAKI 43
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG 132
LV ++ E VVV GE S+ Q A++RVFER + E + + C
Sbjct: 44 LV-------EDLVSAEERVVVIVGEESAAQVALVRVFERTVDEETK-------NSTVSCK 89
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKK 189
L+A + ++G V+G+GG+ V ++R ++GA I +LP P ++ IQITG AVKK
Sbjct: 90 LVAPSYQVGCVLGRGGKIVEKIRQDTGAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKK 149
Query: 190 ALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNAS 249
A+++V+ C FY N+S + P D+ S
Sbjct: 150 AVLSVSAC---------------------FYDNNSGAFK---------------PLDHHS 173
Query: 250 EFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
S + H + +++V ++L +IGK G++VR+LQN +GA I
Sbjct: 174 RGCYSESAGHSSH----RMFLEEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQI 229
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
S ERVV ISA E + +HSP Q A + V R E+ GF AV
Sbjct: 230 VEAGPDSDERVVVISARETSEQKHSPAQEAVIRVHCRLTEI----GFEPSA----AVVAK 281
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
+LV + VGCL G G +SEM VTG I++ EQ+ +QN+ V+Q+ G ++VQ+
Sbjct: 282 LLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQI-KYISQNEEVVQVIGSLQSVQD 340
Query: 430 ALSEVVGRLRHNL 442
AL + R+R +
Sbjct: 341 ALFHITSRIRETI 353
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 30/252 (11%)
Query: 4 HSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG 63
+S G+SS R + L +DVV F+L+C VG LIG+ GS++ +++ +T I
Sbjct: 177 YSESAGHSSHR---MFLEEDVV-FKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEA 232
Query: 64 FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
P SD RV+++ + +++ S QEAVIRV R+ E+ E
Sbjct: 233 GPDSDERVVVISARETSEQKH--------------SPAQEAVIRVHCRLTEIGFEPSA-- 276
Query: 124 DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAI--DDQLIQIT 181
LL + ++G ++GKGG ++ MR +GA I + I +++++Q+
Sbjct: 277 ----AVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQIKYISQNEEVVQVI 332
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRP----IEKVFYSNSSDPHREFFPHLSLV 237
G+ +V+ AL +T+ ++ ++P F+ P P
Sbjct: 333 GSLQSVQDALFHITSRIRETIFPIRTPPNFSAPPHLPPFPEMPPPLFRPRNHLMSSGHPP 392
Query: 238 PPLTGNPSDNAS 249
PP G+P D+++
Sbjct: 393 PPQVGHPHDHST 404
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 211/443 (47%), Gaps = 34/443 (7%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 87 CENDVVVEG-GEVSS---TQEAVIRVFERMW--EVEAEVEGDGDGDDVAYCGLLANTTKI 140
+ +G G + Q+A++++ +++ E+ EV D DDV +L ++
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVT-ARILVQGNQV 163
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GKGG + ++R ++GA I +L P CA D+L+QI+GA V+KAL ++T
Sbjct: 164 GCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTR 223
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSAD 257
L E NRP+E++ +++ H P L P+ + + D
Sbjct: 224 LHQHPRKE------NRPLEQIIDASTQRKHES--PTLQHENPMLPH-LHSHHPPPIPLLD 274
Query: 258 ADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTK-- 315
R P +E ++R+L + +IGK GA VR ++ +GA I + K
Sbjct: 275 PYRSGPQY-PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQE-IDKDA 332
Query: 316 SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGAD 375
SGER++ +S+ E SP A +L+ + V ++ SS ++V ++
Sbjct: 333 SGERLIIVSSNEIPTEPISPTIEALILLHDK-VSASSEKHHSS---------TRLVVPSN 382
Query: 376 FVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVV 435
VGC+ G G ++EM TG +I++ + D ++Q++G + AL+E+
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIA 442
Query: 436 GRLR-HNLKSGEILNEARPRSPS 457
RLR L+ N P +PS
Sbjct: 443 SRLRTRTLRDTSTANNPPPFAPS 465
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 25/230 (10%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ HS+S D R H E R+L ++G+ G IV++L
Sbjct: 9 SNSKKRRHSNSDDGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTI----SALEYLD--------------TRHSPVQNAAV 341
+ + A I A + + ERV+ I + E D H Q+A +
Sbjct: 69 REETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALL 128
Query: 342 LVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+ + V E + E+ D V ILV + VGCL G G S + ++ TG I++
Sbjct: 129 KIHDKIVADEIYDEVAHDESSDD-VTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
Query: 402 VGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE 450
+ E + CA Q+D ++QISG V+ AL E+ RL +H K L +
Sbjct: 188 LSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQ 237
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 291 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 339
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++ E +S T EA+I + ++ V A E + L+ + K+G ++G
Sbjct: 340 VSSNEIPTE--PISPTIEALILLHDK---VSASSEKHH-----SSTRLVVPSNKVGCILG 389
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+GG+ +T MR +GA+I + P + D+L+Q+ G + AL + + L+
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLR 446
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 226/467 (48%), Gaps = 49/467 (10%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
N D VV +R++CP+ V+G +IG+SG +I+ IR++T+ RI FPG RVI + S
Sbjct: 37 NKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSV 96
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG--DGDDVAYCGLLAN 136
+ + I+ E+ + + S Q+A+++V + + A + D DD+ C LL
Sbjct: 97 TEKKDIIDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIRECRLLVP 156
Query: 137 TTKIGVVVGKGG------RNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+++ V+GK G R+ TR ++ +K V P CA D ++ I+G + +VKKA
Sbjct: 157 SSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGESESVKKA 216
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKV-----------------FYSNSSDPHREFFPH 233
L AV+ + +S E+ P+ + +++V Y N DP F H
Sbjct: 217 LFAVSAIMYKVSPREQIPL--DTTVQEVPASIIIPSDLSIYPQGGLYPN-QDP---IFQH 270
Query: 234 LSLVPPLTGNPSDNASEFHSS-----SADADRDHPGLDKKGRKQEVALRMLFSGWTASGI 288
+ V G E ++ SA A G + +++ ++++ S +
Sbjct: 271 GANVSSFIGTLPQGYGESAANPMPVFSASALPVVHGFGGSSKSEKLVIKVICSSSKIGRV 330
Query: 289 IGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IGK G+ ++ ++ ASG+ I + + V+T++A E D S + AVL+
Sbjct: 331 IGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKS-MAVEAVLLLQEK 389
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
+ E ++ V + +LV + +GC+ G S +SE+ T +I + G
Sbjct: 390 INDEDEE----------KVKMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGNNK 439
Query: 408 LGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-LKSGEILNEARP 453
CA ND +++ISGE +V++AL ++V RLR + L+ EI + +P
Sbjct: 440 PKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQP 486
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 219/460 (47%), Gaps = 47/460 (10%)
Query: 3 HHSNPYGYS--SKRRGPLN-------LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRD 53
H + YG + +KRR P + P+D V +R +CP +G +IGR G I+ +R D
Sbjct: 13 HSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTV-YRYLCPGRKIGSIIGRGGEIVKQLRVD 71
Query: 54 TKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMW 113
TK +I PG + RV+ + S D F ++D V S Q+A+ RV +R+
Sbjct: 72 TKSKIRIGETVPGCEERVVTIYSSS--DETNAFDDSDTFV-----SPAQDALFRVHDRV- 123
Query: 114 EVEAEVEG-DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PA 169
V EV G D + LL + +IG V+GKGG+ + +R ESGA++ +L P+
Sbjct: 124 -VSEEVHGEDSEEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDHLPS 182
Query: 170 CAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIE-----KVFYSNSS 224
CA D+L+QI+G V+KAL + + L + + + P + S
Sbjct: 183 CALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMGPTSG 242
Query: 225 DPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWT 284
P P + G+ D + +S+ D + +E +LR++
Sbjct: 243 APIMGLAPLVGTYGGYRGDSGDWSRSLYSAPRD----------EASSKEFSLRLVCPIGN 292
Query: 285 ASGIIGKRGAIVRSLQNASGALISF-AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
G+IGK G I+ ++ SGA I + ++ + ++ ISA E+ + SP AAV +
Sbjct: 293 IGGVIGKGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRL 352
Query: 344 FARSVE-VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
R E VE G S +LV +GCL G G + ++EM +T +I+++
Sbjct: 353 QPRCSEKVERDSGIVS-------FTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRIL 405
Query: 403 GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
E + A+++D ++QI+G+ ++AL +V RLR NL
Sbjct: 406 SKENLPKVASEDDEMVQIAGDLDVAKDALIQVTTRLRANL 445
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 25/244 (10%)
Query: 240 LTGNPSDNASEFHSSSADAD-----RDHPGLDKKG---RKQEVALRMLFSGWTASGIIGK 291
+ G + HS S D R +PG D+ ++ R L G IIG+
Sbjct: 1 MAGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGR 60
Query: 292 RGAIVRSLQNASGALISFAAPLTKSGERVVTI-------SALEYLDTRHSPVQNAAVLVF 344
G IV+ L+ + + I + ERVVTI +A + DT SP Q+A V
Sbjct: 61 GGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRVH 120
Query: 345 ARSV--EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
R V EV G+ + V V +LV +D +GC+ G G + + +G ++++
Sbjct: 121 DRVVSEEVHGED-----SEEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRIL 175
Query: 403 GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-LKSGEILNEARP--RSPSGR 459
+ + CA +D ++QISGE V+ AL ++ RL N +S +L A P S G
Sbjct: 176 KDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGS 235
Query: 460 VGGP 463
+ GP
Sbjct: 236 LMGP 239
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 231/478 (48%), Gaps = 67/478 (14%)
Query: 13 KRRGPLNL--PDDV---VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
KRR P + P DV V FRL+CP +GG+IG+ GSIIS IR +T ++ E PG
Sbjct: 15 KRRKPSGVFSPLDVSSSVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGC 74
Query: 68 DHRVILVVGS---GSIDRRIMFCEND-----------------------VVVEGGEVS-- 99
+ RVI + GS ++ +ND V VE +
Sbjct: 75 EERVITFLKESEEGSAEQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKV 134
Query: 100 ----STQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL--LANTTKIGVVVGKGGRNVTR 153
+ AV+ VFER+ E E GD Y GL L + ++G ++GKGG + R
Sbjct: 135 NSNPTIMRAVMLVFERVAEDEG-----GDESKKGYFGLRLLILSNQVGCILGKGGSVIKR 189
Query: 154 MRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPIC 210
M ESGA+I +LP PACA+ D+L+QITG V++AL +V L S + +
Sbjct: 190 MSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESLP 249
Query: 211 FNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE---FHSSSADADRDHPG--L 265
N SS + +F P+ + + +E FHS+ + H G L
Sbjct: 250 TN------LTGPSSHSYGQFPPNKRTFAGQGASFATGPNEIPVFHSAPM-IPKFHEGAIL 302
Query: 266 DKKGRKQEV-ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
+ E+ R+L + +IGK G+I++ LQ + + I + S + ++ IS
Sbjct: 303 GRMRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIIS 362
Query: 325 ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSG 384
+ D R SPVQ A +F V+ + + ++K ++ ++V + +GCL G G
Sbjct: 363 GPAHPDDRISPVQEA---IF----RVQNRISRAMLDSKEHSMLARVIVSSKHIGCLLGKG 415
Query: 385 SSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
S ++EM +++G I+++G ++ C +++D VIQ+SG + V +AL ++ RLR+N
Sbjct: 416 GSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNF 473
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 30/230 (13%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
G + P ++++FRL+CP+ VG LIG+ GSII ++++T I PGS+ +I++
Sbjct: 303 GRMRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIIS 362
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLA 135
G D RI S QEA+ RV R+ + + + ++
Sbjct: 363 GPAHPDDRI--------------SPVQEAIFRVQNRISRAMLDSK-----EHSMLARVIV 403
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKALV 192
++ IG ++GKGG + MR SGA I ML P C + DD++IQ++G AV AL+
Sbjct: 404 SSKHIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALL 463
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL---SLVPP 239
+TT L++ + P N P F D H F P+L L PP
Sbjct: 464 QITTRLRNNFFRDAFPSA-NFPSNSAFL----DQHSPFPPYLGRRGLSPP 508
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 228/470 (48%), Gaps = 57/470 (12%)
Query: 1 MMHHSNPYG--YSS-------KRRGPLNL-----PDDVVSFRLVCPTPVVGGLIGRSGSI 46
M H N +G YS KRR P + PDD V +R +C + +G +IGR G I
Sbjct: 1 MSGHRNSHGKRYSDYTETGGGKRRNPGDDTYAPGPDDTV-YRYLCASRKIGSIIGRGGEI 59
Query: 47 ISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVI 106
+R +T+ +I PG + RVI + S I E+ +V Q+A+
Sbjct: 60 AKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAED-------KVCPAQDALF 112
Query: 107 RVFERMWEVEAEVEGDGDGDDVA---YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV 163
RV ER+ E+ G+ D ++++ LL + +IG ++GKGG + +R E+GA+I
Sbjct: 113 RVHERLATDESF--GNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIR 170
Query: 164 MLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL-------QHLSTMEKSPICFNR 213
+L PACA D+L+QI+G + VKKAL V++ L QHL S +
Sbjct: 171 VLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLA---SSLTQPY 227
Query: 214 PIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQE 273
P +S+ P P ++PP G D A ++ S P D+ K E
Sbjct: 228 PGGTHLGGSSAAPVVGITP---VIPPYGGYKGDVAGDWPSLY------QPRRDESSAK-E 277
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER-VVTISALEYLDTR 332
+LR+L + G+IGK G I++ ++ SGALI A+ + + ++T+SA E+ +
Sbjct: 278 FSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDP 337
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
SP +AAV + R E S E + +LV +GCL G G S ++E+
Sbjct: 338 VSPTIDAAVRLQLRCSEK------SDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIR 391
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ +I+++ E V AA+++ ++QISG ++AL ++ RL+ N
Sbjct: 392 RTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANF 441
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 142/470 (30%), Positives = 228/470 (48%), Gaps = 57/470 (12%)
Query: 1 MMHHSNPYG--YSS-------KRRGPLNL-----PDDVVSFRLVCPTPVVGGLIGRSGSI 46
M H N +G YS KRR P + PDD V +R +C + +G +IGR G I
Sbjct: 1 MSGHRNSHGKRYSDYTETGGGKRRNPGDDTYAPGPDDTV-YRYLCASRKIGSIIGRGGEI 59
Query: 47 ISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVI 106
+R +T+ +I PG + RVI + S I E+ +V Q+A+
Sbjct: 60 AKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAED-------KVCPAQDALF 112
Query: 107 RVFERMWEVEAEVEGDGDGDDVA---YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV 163
RV ER+ E+ G+ D ++++ LL + +IG ++GKGG + +R E+GA+I
Sbjct: 113 RVHERLATDESF--GNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIR 170
Query: 164 MLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL-------QHLSTMEKSPICFNR 213
+L PACA D+L+QI+G + VKKAL V++ L QHL S +
Sbjct: 171 VLSKDHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLA---SSLTQPY 227
Query: 214 PIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQE 273
P +S+ P P ++PP G D A ++ S P D+ K E
Sbjct: 228 PGGTHLGGSSAAPVVGITP---VIPPYGGYKGDVAGDWPSLY------QPRRDESSAK-E 277
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER-VVTISALEYLDTR 332
+LR+L + G+IGK G I++ ++ SGALI A+ + + ++T+SA E+ +
Sbjct: 278 FSLRLLCAAANVGGVIGKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDP 337
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
SP +AAV + R E S E + +LV +GCL G G S ++E+
Sbjct: 338 VSPTIDAAVRLQLRCSEK------SDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIR 391
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ +I+++ E V AA+++ ++QISG ++AL ++ RL+ N
Sbjct: 392 RTSRANIRILSKENVPKVAAEDEEMVQISGGLDVARHALVQIATRLKANF 441
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 214/453 (47%), Gaps = 32/453 (7%)
Query: 6 NPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFP 65
NP + R ++ D +R +CP +G +IGR G I+ +R DTK +I P
Sbjct: 30 NPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVP 89
Query: 66 GSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE-VEGDG- 123
G D RV+ V + ND G + +A++R+ +++ + VE +
Sbjct: 90 GCDERVVTVYS-------VSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGVEDEDV 142
Query: 124 -----DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDD 175
DG D+ LL + +IG V+GKGG+ V +R E+GA+I +L P CA D
Sbjct: 143 DMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSD 202
Query: 176 QLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS 235
+L+QI+G VKKAL+ V L ++ + V+ ++ S +
Sbjct: 203 ELVQISGEIAVVKKALIQVAARLH--DNPSRTQHLLTSAVPGVYAASGSMVGSHGGAPIM 260
Query: 236 LVPPLTGNPSDNASEFHSSSADADRD-HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
+ P+ G + D R +PG +G +E ++R + G+IGK G
Sbjct: 261 GMAPIGGGYGGYKGDV----VDYPRSMYPGSRDEGSVKEFSVRFVCPTANIGGVIGKGGG 316
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE-VEGQ 353
I+ ++ SGA I + T+ + ++ ISA E + S AAVL+ R E VE
Sbjct: 317 IINQIRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATIEAAVLLQPRCSEKVERD 376
Query: 354 QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQ 413
G S ++ +LV + +GCL G G S ++EM +T +I+++ E + A +
Sbjct: 377 SGILSFTSR-------LLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATE 429
Query: 414 NDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
+D ++QISGE ++AL +V+ RLR NL E
Sbjct: 430 DDEMVQISGELDIAKDALLQVLTRLRANLFDKE 462
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 13/196 (6%)
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL--EY 328
+ + R L IIG+ G IV+ L+ + A I + ERVVT+ ++ E
Sbjct: 46 QDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDES 105
Query: 329 LDTRHS-----PVQNAAVLVFARSVE-----VEGQQGFSSGENKGDAVAVSILVGADFVG 378
D S P +A V + + + VE + + GD V +LV +D +G
Sbjct: 106 NDFEDSGEFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIG 165
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
C+ G G V + TG I+++ +++ CA +D ++QISGE V+ AL +V RL
Sbjct: 166 CVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARL 225
Query: 439 RHN-LKSGEILNEARP 453
N ++ +L A P
Sbjct: 226 HDNPSRTQHLLTSAVP 241
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 225/459 (49%), Gaps = 35/459 (7%)
Query: 4 HSNPYG-YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKC-RIHCE 61
H +P+ +S+ GP + V FRL+ P+ R + ++ +RR T ++ E
Sbjct: 9 HFSPHATFSAPDAGPADTGFAV--FRLLLPSSFSDADTMRLYAAVNPLRRRTATLQVRVE 66
Query: 62 GGFPGSD--HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV 119
P S V +VG RR+ + E +S QEA++ V + + V
Sbjct: 67 PLDPASAGGRVVAAIVGPTVPVRRVEASSSSA--EPLALSPAQEALVAVIDTEGALCCAV 124
Query: 120 EGDGDGDD---VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGA--KIVMLP----PPAC 170
E + G C LL + ++ G+G + R+ +E+GA ++ M PP
Sbjct: 125 EKEARGKARPGCITCLLLVDADRLEASTGRG--VMERIALEAGADVRVAMWEEGAQPPRG 182
Query: 171 AAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF 230
++ ++++ITG AV+KALVA+++ LQ + S + + +++S P
Sbjct: 183 QPLE-EVVEITGDRTAVRKALVALSSFLQGDLPIGNSTTYVKKEGSILPWASSEVPG--- 238
Query: 231 FPHLSLVPPLTGNPSDNASEFHSSS---ADADRDHPGLDKKGRKQEVALRMLFSGWTASG 287
P + + S+ ++EF S + G + Q+V+ R+L + A G
Sbjct: 239 -------PNMGASCSEASTEFAQGSVAKTHCPEGNTGDAQSKTLQQVSFRLLLPTYLAGG 291
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
+IGK+G I++ ++ +GA I AP+ ERV+TI ALE D+ + VQ+A +L+F R
Sbjct: 292 LIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSEYHIVQSALLLIFDRM 351
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
+E+E S K V +LV + GCL G G S + EM + TG I+++ ++
Sbjct: 352 MEMETNT--HSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEI 409
Query: 408 LGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
CA+ ++V+QI+GE N++NALS V +LR+++ S E
Sbjct: 410 PACASTFELVVQITGELMNIRNALSLVFWKLRNHIFSNE 448
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 203/443 (45%), Gaps = 68/443 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDE 104
Query: 87 CENDVVVEG-GEVSS---TQEAVIRVFERMW--EVEAEVEGDGD---GDDVAYCGLLANT 137
+ +G G S Q+A++++ +++ E+ EV D DDV +L
Sbjct: 105 AAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVT-ARILVQG 163
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
++G ++GKGG + ++R +GA I +LP P CA D+L+QI+GA V+KAL +
Sbjct: 164 NQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEI 223
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVF----------------YSNSSDPHREFFPHLSLVP 238
+T L E NRP+E++ YS H + P + L+
Sbjct: 224 STRLHQHPRKE------NRPLEEIIDASTQRKRESPTLQHEYSMLPHLHSDHTPPIPLLD 277
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
P P +E +E ++R+L + +IGK GA VR
Sbjct: 278 PYRSGPQYPVTE--------------------TEEFSIRILCASELIGSVIGKSGANVRR 317
Query: 299 LQNASGALISFAAPLTK--SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
++ +GA I + K SGER++ IS+ E SP A +L+ + V ++
Sbjct: 318 VEQQTGARIKVQE-IDKDASGERLIIISSNEIPAEPISPAIEALILLHDK-VSAPSEKHH 375
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV 416
SS ++V + VGC+ G G +++M TG +I++ + +D
Sbjct: 376 SS---------TRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDE 426
Query: 417 VIQISGEYKNVQNALSEVVGRLR 439
++Q++G + AL+E+ RLR
Sbjct: 427 LVQVAGPPTIARGALTEIASRLR 449
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ HS+S D R H E R+L ++G+ G IV++L
Sbjct: 9 SNSKKRTHSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTI-----------SALEYLDT-------RHSPVQNAAV 341
+ + A I A + + ERV+ I A E ++ H Q+A +
Sbjct: 69 REETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALL 128
Query: 342 LVFARSV--EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
+ + V E+ + D V ILV + VGCL G G S + ++ TG I
Sbjct: 129 KIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGI 188
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE 450
+++ E + CA ++D ++QISG V+ AL E+ RL +H K L E
Sbjct: 189 RVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEE 240
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 294 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 342
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++ E +S EA+I + ++ V A E L+ ++K+G ++G
Sbjct: 343 ISSNEIPAE--PISPAIEALILLHDK---VSAPSEKHHSS-----TRLVVPSSKVGCIIG 392
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+GG+ +T MR +GA+I + P + DD+L+Q+ G + AL + + L+
Sbjct: 393 EGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 203/443 (45%), Gaps = 68/443 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDE 104
Query: 87 CENDVVVEG-GEVSS---TQEAVIRVFERMW--EVEAEVEGDGD---GDDVAYCGLLANT 137
+ +G G S Q+A++++ +++ E+ EV D DDV +L
Sbjct: 105 AAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVT-ARILVQG 163
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
++G ++GKGG + ++R +GA I +LP P CA D+L+QI+GA V+KAL +
Sbjct: 164 NQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEI 223
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVF----------------YSNSSDPHREFFPHLSLVP 238
+T L E NRP+E++ YS H + P + L+
Sbjct: 224 STRLHQHPRKE------NRPLEEIIDASTQRKRESPTLQHEYSMLPHLHSDHTPPIPLLD 277
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
P P +E +E ++R+L + +IGK GA VR
Sbjct: 278 PYRSGPQYPVTE--------------------TEEFSIRILCASELIGSVIGKSGANVRR 317
Query: 299 LQNASGALISFAAPLTK--SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
++ +GA I + K SGER++ IS+ E SP A +L+ + V ++
Sbjct: 318 VEQQTGARIKVQE-IDKDASGERLIIISSNEIPAEPISPAIEALILLHDK-VSAPSEKHH 375
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV 416
SS ++V + VGC+ G G +++M TG +I++ + +D
Sbjct: 376 SS---------TRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDE 426
Query: 417 VIQISGEYKNVQNALSEVVGRLR 439
++Q++G + AL+E+ RLR
Sbjct: 427 LVQVAGPPTIARGALTEIASRLR 449
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ HS+S D R H E R+L ++G+ G IV++L
Sbjct: 9 SNSKKRTHSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTI-----------SALEYLDT-------RHSPVQNAAV 341
+ + A I A + + ERV+ I A E ++ H Q+A +
Sbjct: 69 REETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALL 128
Query: 342 LVFARSV--EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
+ + V E+ + D V ILV + VGCL G G S + ++ TG I
Sbjct: 129 KIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGI 188
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE 450
+++ E + CA ++D ++QISG V+ AL E+ RL +H K L E
Sbjct: 189 RVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEE 240
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 294 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 342
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++ E +S EA+I + ++ V A E L+ ++K+G ++G
Sbjct: 343 ISSNEIPAE--PISPAIEALILLHDK---VSAPSEKHHSS-----TRLVVPSSKVGCIIG 392
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+GG+ +T MR +GA+I + P + DD+L+Q+ G + AL + + L+
Sbjct: 393 EGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 226/453 (49%), Gaps = 58/453 (12%)
Query: 13 KRRGPLNL-----PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
KRR P + PDD V +R +CP+ +G +IGR G I +R DT+ +I G
Sbjct: 24 KRRNPGDDTYAPGPDDTV-YRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGC 82
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDD 127
D RVI + S ++ E+ +V Q+A+ RV E++ ++ ++ + +
Sbjct: 83 DERVITIFSSSRETNTLVDAED-------KVCPAQDALFRVHEKL-SIDDDIGNEESDEG 134
Query: 128 VAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITG 182
+A LL + +IG ++GKGG + +R ++GA I +L PACA D+L+QI+G
Sbjct: 135 LAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISG 194
Query: 183 ATLAVKKALVAVTTCL-------QHL--STMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
+ V+KAL+ V++ L QHL S+M + P+ S+S+ P
Sbjct: 195 DSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQP-----YPVGSHLGSSSTAP------- 242
Query: 234 LSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQ----EVALRMLFSGWTASGII 289
+ + PL S + D D P + + R++ E +LR+L + G+I
Sbjct: 243 VVGITPLI-------SSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVI 295
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
GK G I++ ++ SGA I + T+ + ++T+SA E+ + SP NAAV + R E
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSNTED-DCIITVSAKEFFEDPVSPTINAAVHLQPRCSE 354
Query: 350 VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG 409
+ E+ + +LV +GCL G G S ++E+ + +I+++ E V
Sbjct: 355 K------TDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPK 408
Query: 410 CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
AA+++ ++QISG+ V++AL ++ RL+ N
Sbjct: 409 VAAEDEEMVQISGDLDVVRHALLQITTRLKANF 441
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 226/453 (49%), Gaps = 58/453 (12%)
Query: 13 KRRGPLNL-----PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
KRR P + PDD V +R +CP+ +G +IGR G I +R DT+ +I G
Sbjct: 24 KRRNPGDDTYAPGPDDTV-YRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGC 82
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDD 127
D RVI + S ++ E+ +V Q+A+ RV E++ ++ ++ + +
Sbjct: 83 DERVITIFSSSRETNTLVDAED-------KVCPAQDALFRVHEKL-SIDDDIGNEESDEG 134
Query: 128 VAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITG 182
+A LL + +IG ++GKGG + +R ++GA I +L PACA D+L+QI+G
Sbjct: 135 LAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISG 194
Query: 183 ATLAVKKALVAVTTCL-------QHL--STMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
+ V+KAL+ V++ L QHL S+M + P+ S+S+ P
Sbjct: 195 DSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQP-----YPVGSHLGSSSTAP------- 242
Query: 234 LSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQ----EVALRMLFSGWTASGII 289
+ + PL S + D D P + + R++ E +LR+L + G+I
Sbjct: 243 VVGITPLI-------SSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVI 295
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
GK G I++ ++ SGA I + T+ + ++T+SA E+ + SP NAAV + R E
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSNTED-DCIITVSAKEFFEDPVSPTINAAVHLQPRCSE 354
Query: 350 VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG 409
+ E+ + +LV +GCL G G S ++E+ + +I+++ E V
Sbjct: 355 K------TDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPK 408
Query: 410 CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
AA+++ ++QISG+ V++AL ++ RL+ N
Sbjct: 409 VAAEDEEMVQISGDLDVVRHALLQITTRLKANF 441
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 216/453 (47%), Gaps = 55/453 (12%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV------ 75
D++V +R++CP V+G +IG+SG +I+SIR +++ R+ FPG+ +RVI +
Sbjct: 33 DELVVYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEK 92
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG--DDVAYCGL 133
G +D D + + Q+A+++V + A + GD D D C +
Sbjct: 93 GDADVD--------DDFHQADPLCPAQDALLKVHAAISNAVAAL-GDSDKRCRDKKECQI 143
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATLAV 187
L T++ ++GK G + ++R ++ A I + P +CA D + ITG + AV
Sbjct: 144 LVPTSQSANIIGKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNFLLITGESEAV 203
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSD-PHRE---FFPHLS------LV 237
KKAL AV+ + S E+ P+ P SSD P + F+P+ V
Sbjct: 204 KKALFAVSAIMYKFSPKEEIPLETTVPEAPPSIIISSDVPIYQPGGFYPNADPIVSSRSV 263
Query: 238 PPLTGNPSDNASEFH------SSSADADRDHPGLDKKGR--KQEVALRMLFSGWTASGII 289
PP+ G + + EF SS P + G + E+ +R+L +I
Sbjct: 264 PPILG--ATHIPEFQGYGDMRSSWPIYSSTVPVVPSFGNTSRSELIIRLLCPFDKIGRVI 321
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
GK G+ ++S++ SGA I E ++T+ A E D S A +L+
Sbjct: 322 GKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATESPDDLKSMAVEAILLL------ 375
Query: 350 VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG 409
QG + E+ D V + LV + +GC+ G + V+E+ T D+ + ++ L
Sbjct: 376 ----QGKINDED-NDIVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCISKVDK-LK 429
Query: 410 CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
CA ND +++++GE +V++AL ++V RLR ++
Sbjct: 430 CADSNDELVEVAGEVGSVRDALVQIVLRLRDDV 462
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 222/478 (46%), Gaps = 70/478 (14%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+R++C GG+IG+SGSII SIR+ T I+ PG + R+I + S RR
Sbjct: 87 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRR-- 140
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV----EGDGDGDDVAYCG--------- 132
D S QEA+ + +R+ E + + G G ++ Y G
Sbjct: 141 ---RDPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATR 197
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
L+ + +G ++GKGG+ + +MR+E+ +I +LP P C ++ ++++Q+ G AVK
Sbjct: 198 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVK 257
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR----EFFPHLSLV------P 238
A+ +++ L+ ++S F+ P R ++ PH++ P
Sbjct: 258 NAVAIISSRLRESQHRDRS----------HFHGRVQSPERFLDDDYVPHMNTRRSSMDGP 307
Query: 239 PLTGN----PSDNASEFHSSS----ADADRDHPGLD--KKGRKQEVALRMLFSGWTASGI 288
P G+ P+ + + S + DA D P D + +++ R+L + +
Sbjct: 308 PSFGSRLSGPNYRNNNYSSRAPGFPVDAGAD-PNADSAQPFYVEDLVFRILCPIDKVNRV 366
Query: 289 IGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSV 348
+G+ +V LQN G + A P++ S E+++TI + E D P Q A + + R V
Sbjct: 367 VGESDGLVDLLQNEIGVDVKVADPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTRIV 426
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
++ +K + + +LV + +GCL G S +SEME +TG I+++ E +
Sbjct: 427 DLVA--------DKDNIITTRLLVPSSEIGCLEGRDGS-LSEMESLTGATIEILPKEMLP 477
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR----SPSGRVGG 462
+ D ++QI GE K ++AL EV RLR L + P P+G GG
Sbjct: 478 TYLSGTDELVQIQGEVKAARDALVEVTSRLRSYLYKDVFQKDLPPTVSAPGPAGTAGG 535
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 204/424 (48%), Gaps = 33/424 (7%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 87 CENDVVVEG-GEVSS---TQEAVIRVFERMW--EVEAEVEGDGDGDDVAYCGLLANTTKI 140
+ +G G + Q+A++++ +++ E+ EV D DDV +L ++
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVT-ARILVQGNQV 163
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GKGG + ++R ++GA I +L P CA D+L+QI+GA V+KAL ++T
Sbjct: 164 GCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTR 223
Query: 198 L-QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
L QH P NRP+E++ +++ H P L P+ + +
Sbjct: 224 LHQH-------PRKENRPLEQIIDASTQRKHES--PTLQHENPMLPH-LHSHHPPPIPLL 273
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA-PLTK 315
D R P +E ++R+L + +IGK GA VR ++ +GA I
Sbjct: 274 DPYRSGPQY-PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDA 332
Query: 316 SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGAD 375
SGER++ +S+ E SP A +L+ + V ++ SS ++V ++
Sbjct: 333 SGERLIIVSSNEIPTEPISPTIEALILLHDK-VSASSEKHHSS---------TRLVVPSN 382
Query: 376 FVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVV 435
VGC+ G G ++EM TG +I++ + D ++Q++G + AL+E+
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIA 442
Query: 436 GRLR 439
RLR
Sbjct: 443 SRLR 446
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ HS+S D R H E R+L ++G+ G IV++L
Sbjct: 9 SNSKKRRHSNSDDGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTI----SALEYLDTR--------------HSPVQNAAV 341
+ + A I A + + ERV+ I + E D H Q+A +
Sbjct: 69 REETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALL 128
Query: 342 LVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+ + V E + E+ D V ILV + VGCL G G S + ++ TG I++
Sbjct: 129 KIHDKIVADEIYDEVAHDESSDD-VTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
Query: 402 VGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ E + CA Q+D ++QISG V+ AL E+ RL +
Sbjct: 188 LSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQH 227
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 291 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 339
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++ E +S T EA+I + ++ V A E + L+ + K+G ++G
Sbjct: 340 VSSNEIPTE--PISPTIEALILLHDK---VSASSEKHH-----SSTRLVVPSNKVGCILG 389
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+GG+ +T MR +GA+I + P + D+L+Q+ G + AL + + L+
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLR 446
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 54/443 (12%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
++R++C GG+IG+SG+II SIR+ T I+ PG R+I + S +RR
Sbjct: 70 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEI----SDNRR-- 123
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVE-------AEVEGDGD------GDDVAYCG 132
D S QEA+ V +R+ E E A+ E + D G
Sbjct: 124 ---RDPDGRMPSFSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRPGGGRVVTR 180
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
L+ + +G ++GKGG+ + +MRIE+ I +LP P C ++ ++++QI G AVK
Sbjct: 181 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELSAVK 240
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDN- 247
AL+ V++ L+ ++S F S P R+F P SD
Sbjct: 241 NALLIVSSRLRESQHRDRSN----------FQGRSHSPERQFAAAGDDYIPQRRQSSDRF 290
Query: 248 ------ASEFHSSSADADRDHPGLD--KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
+ F S ++ + P + + +E+ ++L ++G+ I+ L
Sbjct: 291 PRGNYRNNNFSSRQSNYAEEAPAVPVGENVYTEELVFQILCPADKIVRVVGESQGILDLL 350
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
QN G + + P+T S E+++TIS+ E D P Q A + + + +++
Sbjct: 351 QNEIGVDVRVSDPVTGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDL--------L 402
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
+K + + +LV + CL G S VSE+ +TGT ++++ E++ CA+ NDVVIQ
Sbjct: 403 PDKDNLITTRLLVSSRDSVCLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVIQ 461
Query: 420 ISGEYKNVQNALSEVVGRLRHNL 442
I+G+ + ++AL E+ LR ++
Sbjct: 462 ITGDIRAARDALVELTLLLRSHM 484
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
N+ + + F+++CP + ++G S I+ ++ + + GSD ++I +
Sbjct: 319 NVYTEELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSEE 378
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+ D QEA++ + ++ ++ D D++ LL ++
Sbjct: 379 APDDPFF--------------PAQEALLHIQTQIIDLLP------DKDNLITTRLLVSSR 418
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVT 195
+ GK G +V+ + +G + +L P CA+I+D +IQITG A + ALV +T
Sbjct: 419 DSVCLEGKAG-SVSEISRLTGTSVQILAREEIPRCASINDVVIQITGDIRAARDALVELT 477
Query: 196 TCL-----QHLSTMEKSP 208
L + LS E P
Sbjct: 478 LLLRSHMFKELSQKETPP 495
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 213/450 (47%), Gaps = 61/450 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+R++C GG+IG+SGSII SIR+ T I+ PG + R+I + S RR
Sbjct: 62 SYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI----SDTRR-- 115
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV---------EGDGDGDDVAYCGLLAN 136
D S QEA++ + ER+ E +A G G G D L+ +
Sbjct: 116 ---RDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDRIATRLVVS 172
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALV 192
+G ++GKGG+ + +MR+E+ +I +LP P C ++ ++++Q+ G AVK ALV
Sbjct: 173 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNALV 232
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG---NPSDNAS 249
+++ L+ ++S F+ P R F P VP +T S + +
Sbjct: 233 IISSRLRESQHRDRSH----------FHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGA 282
Query: 250 EFHSSSADA---DRDHPGL-------------DKKG-RKQEVALRMLFSGWTASGIIGKR 292
F S ++ + +HP L D +G +E+ R+L IIG+
Sbjct: 283 SFGSRGSNTNSRNNNHPSLNYAMEPGAAPVVDDAQGFYGEELVFRILCPIEKVDRIIGES 342
Query: 293 GAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEG 352
IV LQN G + P+ S E+++ I++ E D P Q A + V R V++
Sbjct: 343 EGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHVQTRIVDL-- 400
Query: 353 QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
+K + + ++V + + CL G S +SE+ +TG +I+++ +++ C A
Sbjct: 401 ------VLDKDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDELPLCVA 453
Query: 413 QNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ D ++QI GE K ++A+ EV RLR L
Sbjct: 454 KTDELVQIVGEIKAARDAVVEVTSRLRSYL 483
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 213/453 (47%), Gaps = 64/453 (14%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+R++C GG+IG+SGSII SIR+ T I+ PG + R+I + S RR
Sbjct: 62 SYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI----SDTRR-- 115
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE---VEGDGD---------GDDVAYCGL 133
D S QEA++ + ER+ E +A E D + G D L
Sbjct: 116 ---RDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRDRVATRL 172
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKK 189
+ + +G ++GKGG+ + +MR+E+ +I +LP P C ++ ++++Q+ G AVK
Sbjct: 173 VVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKN 232
Query: 190 ALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG---NPSD 246
ALV +++ L+ ++S F+ P R F P VP +T S
Sbjct: 233 ALVIISSRLRESQHRDRSH----------FHGRVHSPERFFSPDDDYVPHVTSGSRRSSV 282
Query: 247 NASEFHSSSADA---DRDHPGL-------------DKKG-RKQEVALRMLFSGWTASGII 289
+ + F S ++ + +HP L D +G +E+ R+L II
Sbjct: 283 DGASFGSRGSNTNSRNNNHPSLSYAMEPGAAPVVDDAQGFYGEELVFRILCPVEKVDLII 342
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE 349
G+ IV LQ+ G + P+ S E+++ I++ E D P Q A + + R V+
Sbjct: 343 GESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHIQTRIVD 402
Query: 350 VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG 409
+ +K + + ++V + + CL G S +SE+ +TG +I+++ + +
Sbjct: 403 L--------VLDKDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDDLPL 453
Query: 410 CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
C A+ D ++QI GE K ++A+ EV RLR L
Sbjct: 454 CVAKTDELVQIVGEIKAARDAVVEVTSRLRSYL 486
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 219/452 (48%), Gaps = 56/452 (12%)
Query: 13 KRRGPLN-----LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
KRR P + PDD V +R +C + +G +IGR G I +R DT+ +I PG
Sbjct: 24 KRRNPGDDTYAPCPDDTV-YRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGC 82
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDD 127
D RVI + S + E+ +V Q+A+ RV E++ + DG GD+
Sbjct: 83 DERVITIFSSSRETNTVEDTED-------KVCPAQDALFRVHEKL------ITDDGPGDE 129
Query: 128 VAYCGL-------LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQL 177
GL L + +IG ++GKGG + +R ++G+ I +L PACA D+L
Sbjct: 130 ENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHLPACAISGDEL 189
Query: 178 IQITGATLAVKKALVAVTTCL-------QHLSTMEKSPICFNRPIEKVFYSNSSDPHREF 230
+QI+G L V+KAL+ V++ L QHL S + P+ S+S+ P
Sbjct: 190 LQISGDPLVVRKALLQVSSRLHDNPSRSQHLLA---SSLTQPYPVGSRHGSSSTTPVVGI 246
Query: 231 FPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIG 290
P +V P G D ++ S P ++ K E +LR+L + G+IG
Sbjct: 247 AP---MVNPYGGYKGDMVGDWPSIY------QPRREESSAK-EFSLRLLCAASDVGGVIG 296
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEV 350
K G I++ ++ SGA I + + + ++T+SA E+ + SP +A V + R E
Sbjct: 297 KGGGIIKQIRQESGAFIKVDSS-SAEDDCIITVSAKEFFEDPISPTIDATVRLQPRCSEK 355
Query: 351 EGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGC 410
+ SGE + +LV +GCL G G S ++E+ + +I+++ E V
Sbjct: 356 TDPE---SGEP---SYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKV 409
Query: 411 AAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
A++++ ++QISG+ ++AL ++ RL+ N
Sbjct: 410 ASEDEEMVQISGDLDVAKHALVQITTRLKANF 441
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 208/444 (46%), Gaps = 55/444 (12%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
++R++C GG+IG+SG+II SIR+ T I+ PG R+I + S +RR
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI----SDNRR-- 122
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG----DGDDVAY---------CG 132
D S QEA+ V +R+ E EA+ G + +D
Sbjct: 123 ---RDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTR 179
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
L+ + +G ++GKGG+ + +MRIE+ I +LP P C ++ ++++QI G AVK
Sbjct: 180 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVK 239
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH-LSLVPPLTGNPSDN 247
AL V++ L+ ++S F S P R F +P L SD
Sbjct: 240 NALAIVSSRLRESQHRDRSN----------FQGRSHSPERSFAAAGDDYMPQLRRQSSDR 289
Query: 248 -------ASEFHSSSADADRDHPGLD--KKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
+ F S ++ + P + + +E+ ++L ++G+ I+
Sbjct: 290 FPRGNFRNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDL 349
Query: 299 LQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSS 358
LQN G + + P+ S E+++TIS+ E D P Q A + + + +++
Sbjct: 350 LQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDL-------- 401
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
+K + + +LV + CL G S VSE+ +TGT ++++ E++ CA+ NDVVI
Sbjct: 402 IPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVI 460
Query: 419 QISGEYKNVQNALSEVVGRLRHNL 442
QI+GE + + AL E+ LR ++
Sbjct: 461 QITGEIRAAREALVELTLLLRSHM 484
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
N+ + + F+++CP + ++G S II ++ + + GSD ++I +
Sbjct: 319 NVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEE 378
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+ D QEA++ + ++ ++ D D++ LL +
Sbjct: 379 APDDPFF--------------PAQEALLHIQTQIIDLIP------DKDNLITTRLLVPSR 418
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVT 195
+ GK G +V+ + +G + +L P CA+I+D +IQITG A ++ALV +T
Sbjct: 419 DSICLEGKAG-SVSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELT 477
Query: 196 TCL-----QHLSTMEKSP 208
L + LS E P
Sbjct: 478 LLLRSHMFKELSQKETPP 495
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 208/444 (46%), Gaps = 55/444 (12%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
++R++C GG+IG+SG+II SIR+ T I+ PG R+I + S +RR
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI----SDNRR-- 122
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG----DGDDVAY---------CG 132
D S QEA+ V +R+ E EA+ G + +D
Sbjct: 123 ---RDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTR 179
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
L+ + +G ++GKGG+ + +MRIE+ I +LP P C ++ ++++QI G AVK
Sbjct: 180 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVK 239
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH-LSLVPPLTGNPSDN 247
AL V++ L+ ++S F S P R F +P L SD
Sbjct: 240 NALAIVSSRLRESQHRDRSN----------FQGRSHSPERSFAAAGDDYMPQLRRQSSDR 289
Query: 248 -------ASEFHSSSADADRDHPGLD--KKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
+ F S ++ + P + + +E+ ++L ++G+ I+
Sbjct: 290 FPRGNFRNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDL 349
Query: 299 LQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSS 358
LQN G + + P+ S E+++TIS+ E D P Q A + + + +++
Sbjct: 350 LQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDL-------- 401
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
+K + + +LV + CL G S VSE+ +TGT ++++ E++ CA+ NDVVI
Sbjct: 402 IPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVI 460
Query: 419 QISGEYKNVQNALSEVVGRLRHNL 442
QI+GE + + AL E+ LR ++
Sbjct: 461 QITGEIRAAREALVELTLLLRSHM 484
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
N+ + + F+++CP + ++G S II ++ + + GSD ++I +
Sbjct: 319 NVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEE 378
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+ D QEA++ + ++ ++ D D++ LL +
Sbjct: 379 APDDPFF--------------PAQEALLHIQTQIIDLIP------DKDNLITTRLLVPSR 418
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVT 195
+ GK G +V+ + +G + +L P CA+I+D +IQITG A ++ALV +T
Sbjct: 419 DSICLEGKAG-SVSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELT 477
Query: 196 TCL-----QHLSTMEKSP 208
L + LS E P
Sbjct: 478 LLLRSHMFKELSQKETPP 495
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 217/447 (48%), Gaps = 42/447 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R TK +I PG+D RVI++ S +
Sbjct: 55 YRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSS---QTEE 111
Query: 87 CENDVVVEGGEVSS----TQEAVIRVFERMW---EVEAEV--EGDGDGDDVAYCGLLANT 137
++ +G E Q+A++++ +++ ++ A + E + DDV +L
Sbjct: 112 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVI-ARILVPG 170
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
++G ++GKGG + ++R ++GA I +LP P CA D+L+QI+G++ V+KAL +
Sbjct: 171 NQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEI 230
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR--EFFPHLS-LVPPLTGNPSDNASEF 251
+T L + P N P+E++ +++ H+ PH + ++P L + S
Sbjct: 231 STRLH------QHPRKDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLL 284
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA- 310
D R+ P +E ++++L + +IGK G VR ++ +GA +
Sbjct: 285 -----DPYRNRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKE 339
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
S ER++ +S+ E D SP A +L+ ++ + EN + +
Sbjct: 340 VGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTL--------AENH--HLTTRL 389
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+V ++ VGC+ G G ++EM TG +I++ + ++ ++Q++G + A
Sbjct: 390 VVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGA 449
Query: 431 LSEVVGRLR-HNLKSGEILNEARPRSP 456
L+E+ RLR L+ G N P +P
Sbjct: 450 LTEIASRLRTRTLRDGSSSNNPTPFAP 476
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 249 SEFHSSSADADRDHPGLDKKGRKQ---------------EVALRMLFSGWTASGIIGKRG 293
S H S+ R H D RK+ E R+L ++G+ G
Sbjct: 13 SRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGG 72
Query: 294 AIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAV--------LVFA 345
IV++L++ + A I A + + ERV+ I Y QN + FA
Sbjct: 73 DIVKALRDTTKAKIRVADSIPGADERVIII--FNYSSQTEEAAQNISTDGFEDMKPHCFA 130
Query: 346 RSV------EVEGQQGFSSG------ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ ++ + +G EN D +A ILV + VGCL G G S + ++ +
Sbjct: 131 QDALLKIHDKIAADEDLHAGIVHEKSENVDDVIA-RILVPGNQVGCLLGKGGSIIQQLRN 189
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE-- 450
TG I+++ E + CA ++D ++QISG V+ AL E+ RL +H K L E
Sbjct: 190 DTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEII 249
Query: 451 ---------ARPRSPSGRVGGPALHKLH 469
A P+ P P LH H
Sbjct: 250 DASTQRKHQAPPQLPHANPMLPHLHVDH 277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDT-KCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S +++C + +G +IG+SG + + + T C E G S+ R+I+V D
Sbjct: 303 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPD--- 359
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
VS T EA+I + ++ + AE + L+ + K+G ++
Sbjct: 360 -----------DPVSPTIEALILLHSKVSTL-AE-------NHHLTTRLVVPSNKVGCII 400
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
G+GG+ +T MR +GA+I + P + D++L+Q+ G + AL + + L+
Sbjct: 401 GEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTR 460
Query: 202 ------STMEKSPIC-FNRPIEKVFYSNSSDPHREF--FPHLSLVPPLTGNPSD 246
S+ +P F+ P + P+REF + + PP G P+D
Sbjct: 461 TLRDGSSSNNPTPFAPFDGPPVDIL------PNREFMLYGRSANSPPYGGPPND 508
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 217/447 (48%), Gaps = 42/447 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R TK +I PG+D RVI++ S +
Sbjct: 48 YRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSS---QTEE 104
Query: 87 CENDVVVEGGEVSS----TQEAVIRVFERMW---EVEAEV--EGDGDGDDVAYCGLLANT 137
++ +G E Q+A++++ +++ ++ A + E + DDV +L
Sbjct: 105 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVI-ARILVPG 163
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
++G ++GKGG + ++R ++GA I +LP P CA D+L+QI+G++ V+KAL +
Sbjct: 164 NQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEI 223
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR--EFFPHLS-LVPPLTGNPSDNASEF 251
+T L + P N P+E++ +++ H+ PH + ++P L + S
Sbjct: 224 STRLH------QHPRKDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLL 277
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA- 310
D R+ P +E ++++L + +IGK G VR ++ +GA +
Sbjct: 278 -----DPYRNRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKE 332
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
S ER++ +S+ E D SP A +L+ ++ + EN + +
Sbjct: 333 VGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTL--------AENH--HLTTRL 382
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+V ++ VGC+ G G ++EM TG +I++ + ++ ++Q++G + A
Sbjct: 383 VVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGA 442
Query: 431 LSEVVGRLR-HNLKSGEILNEARPRSP 456
L+E+ RLR L+ G N P +P
Sbjct: 443 LTEIASRLRTRTLRDGSSSNNPTPFAP 469
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 249 SEFHSSSADADRDHPGLDKKGRKQ---------------EVALRMLFSGWTASGIIGKRG 293
S H S+ R H D RK+ E R+L ++G+ G
Sbjct: 6 SRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGG 65
Query: 294 AIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAV--------LVFA 345
IV++L++ + A I A + + ERV+ I Y QN + FA
Sbjct: 66 DIVKALRDTTKAKIRVADSIPGADERVIII--FNYSSQTEEAAQNISTDGFEDMKPHCFA 123
Query: 346 RSV------EVEGQQGFSSG------ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ ++ + +G EN D +A ILV + VGCL G G S + ++ +
Sbjct: 124 QDALLKIHDKIAADEDLHAGIVHEKSENVDDVIA-RILVPGNQVGCLLGKGGSIIQQLRN 182
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE-- 450
TG I+++ E + CA ++D ++QISG V+ AL E+ RL +H K L E
Sbjct: 183 DTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEII 242
Query: 451 ---------ARPRSPSGRVGGPALHKLH 469
A P+ P P LH H
Sbjct: 243 DASTQRKHQAPPQLPHANPMLPHLHVDH 270
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDT-KCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S +++C + +G +IG+SG + + + T C E G S+ R+I+V D
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPD--- 352
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
VS T EA+I + ++ + AE + L+ + K+G ++
Sbjct: 353 -----------DPVSPTIEALILLHSKVSTL-AE-------NHHLTTRLVVPSNKVGCII 393
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
G+GG+ +T MR +GA+I + P + D++L+Q+ G + AL + + L+
Sbjct: 394 GEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTR 453
Query: 202 ------STMEKSPIC-FNRPIEKVFYSNSSDPHREF--FPHLSLVPPLTGNPSD 246
S+ +P F+ P + P+REF + + PP G P+D
Sbjct: 454 TLRDGSSSNNPTPFAPFDGPPVDIL------PNREFMLYGRSANSPPYGGPPND 501
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 209/452 (46%), Gaps = 46/452 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG----SGSIDR 82
+R++CP +G ++GR G I+ ++R +TK +I PG++ RVI++ S D
Sbjct: 48 YRILCPGKKIGSVLGRGGHIVKALREETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDE 107
Query: 83 RIMFCENDVVVEGGEVSS-TQEAVIRVFERMWEVEAEVEG-----DGDGDDVAYCGLLAN 136
N+ E ++ Q+A++++ +++ E +G DV +L
Sbjct: 108 AAQNISNNDGSENMKLQCFAQDALLKIHDKISTHEDPHDGAIHEKSETAADVT-ARILVP 166
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVA 193
++G ++GKGG + ++R ++GA I +LP P CA D+L+QI+GA V+KAL
Sbjct: 167 GNQVGCLLGKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDELVQISGAPSLVRKALYE 226
Query: 194 VTTCLQHLSTMEKSPI--CFNRPIEKVFYSNSSDPHREF---FPHLSLVPPLTGNPSDNA 248
++T L E P+ + ++ S PH + H+ +PP+
Sbjct: 227 ISTRLHQHPRKENPPLEEIIDASTQRKRESPPPLPHENLMLPYQHVDRLPPMP------- 279
Query: 249 SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
D R P +E ++R+L + +IGK GA VR ++ +GA I
Sbjct: 280 ------LLDPYRSRPSQYPVPEAEEFSVRILCASELIGPVIGKSGANVRQVEQQTGARI- 332
Query: 309 FAAPLTK--SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
L K SGER++ +S+ E SP A +L+ ++ S ++ +
Sbjct: 333 LVQELDKDASGERLIVLSSKEIPGDPVSPAIEALILLHSK----------VSASSEKRHL 382
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKN 426
++V + VGC+ G G ++EM G +I++ + ++ ++Q++G
Sbjct: 383 ITRLVVPSSKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFDEELVQVAGPPDI 442
Query: 427 VQNALSEVVGRLR-HNLKSGEILNEARPRSPS 457
++AL+E+ RLR L+ G N P +PS
Sbjct: 443 ARDALTEIASRLRTRTLRDGGSGNNPLPLAPS 474
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 31/237 (13%)
Query: 243 NPSDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
NPS + H +S D +R H + E R+L G ++G+ G IV+
Sbjct: 10 NPSTSRKRTHFNSDDGNRKRLNSRHDDGPMSSQPIETVYRILCPGKKIGSVLGRGGHIVK 69
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLD------------TRHSPVQNAAVLVFA 345
+L+ + A I A + + ERV+ I +Y D + + +N + FA
Sbjct: 70 ALREETKAKIRVADSIPGAEERVIII--FDYQDQSEQTDEAAQNISNNDGSENMKLQCFA 127
Query: 346 RSVEVEGQQGFSSGENKGDA-----------VAVSILVGADFVGCLTGSGSSAVSEMEDV 394
+ ++ S+ E+ D V ILV + VGCL G G S + ++ +
Sbjct: 128 QDALLKIHDKISTHEDPHDGAIHEKSETAADVTARILVPGNQVGCLLGKGGSIIQQLRND 187
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE 450
TG I+++ + + CA Q+D ++QISG V+ AL E+ RL +H K L E
Sbjct: 188 TGAGIRILPSQDLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENPPLEE 244
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 217/447 (48%), Gaps = 42/447 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R TK +I PG+D RVI++ S +
Sbjct: 48 YRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSS---QTEE 104
Query: 87 CENDVVVEGGEVSS----TQEAVIRVFERMW---EVEAEV--EGDGDGDDVAYCGLLANT 137
++ +G E Q+A++++ +++ ++ A + E + DDV +L
Sbjct: 105 AAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVI-ARILVPG 163
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
++G ++GKGG + ++R ++GA I +LP P CA D+L+QI+G++ V+KAL +
Sbjct: 164 NQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEI 223
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR--EFFPHLS-LVPPLTGNPSDNASEF 251
+T L + P N P+E++ +++ H+ PH + ++P L + S
Sbjct: 224 STRLH------QHPRKDNPPLEEIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPLL 277
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA- 310
D R+ P +E ++++L + +IGK G VR ++ +GA +
Sbjct: 278 -----DPYRNRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKE 332
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
S ER++ +S+ E D SP A +L+ ++ + EN + +
Sbjct: 333 VGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTL--------AENH--HLTTRL 382
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+V ++ VGC+ G G ++EM TG +I++ + ++ ++Q++G + A
Sbjct: 383 VVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGA 442
Query: 431 LSEVVGRLR-HNLKSGEILNEARPRSP 456
L+E+ RLR L+ G N P +P
Sbjct: 443 LTEIASRLRTRTLRDGSSSNNPTPFAP 469
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 249 SEFHSSSADADRDHPGLDKKGRKQ---------------EVALRMLFSGWTASGIIGKRG 293
S H S+ R H D RK+ E R+L ++G+ G
Sbjct: 6 SRRHKSNTSRKRPHFNSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGG 65
Query: 294 AIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAV--------LVFA 345
IV++L++ + A I A + + ERV+ I Y QN + FA
Sbjct: 66 DIVKALRDTTKAKIRVADSIPGADERVIII--FNYSSQTEEAAQNISTDGFEDMKPHCFA 123
Query: 346 RSV------EVEGQQGFSSG------ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ ++ + +G EN D +A ILV + VGCL G G S + ++ +
Sbjct: 124 QDALLKIHDKIAADEDLHAGIVHEKSENVDDVIA-RILVPGNQVGCLLGKGGSIIQQLRN 182
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE-- 450
TG I+++ E + CA ++D ++QISG V+ AL E+ RL +H K L E
Sbjct: 183 DTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEII 242
Query: 451 ---------ARPRSPSGRVGGPALHKLH 469
A P+ P P LH H
Sbjct: 243 DASTQRKHQAPPQLPHANPMLPHLHVDH 270
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDT-KCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S +++C + +G +IG+SG + + + T C E G S+ R+I+V
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQE------ 349
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ VS T EA+I + ++ + AE + L+ + K+G ++
Sbjct: 350 --------IPDDPVSPTIEALILLHSKVSTL-AE-------NHHLTTRLVVPSNKVGCII 393
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
G+GG+ +T MR +GA+I + P + D++L+Q+ G + AL + + L+
Sbjct: 394 GEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTR 453
Query: 202 ------STMEKSPIC-FNRPIEKVFYSNSSDPHREF--FPHLSLVPPLTGNPSD 246
S+ +P F+ P + P+REF + + PP G P+D
Sbjct: 454 TLRDGSSSNNPTPFAPFDGPPVDIL------PNREFMLYGRSANSPPYGGPPND 501
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 210/468 (44%), Gaps = 65/468 (13%)
Query: 8 YGYSSKRRGPLNLPDD-VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPG 66
+G S R P P + V FR++ VG +IG+ G +I ++ T +I E
Sbjct: 6 FGAQSTARVPRQSPPEGYVLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLD 65
Query: 67 SDHRVILVVGSGSIDRRIMFCENDVVVEGGE-------------VSSTQEAVIRVFERMW 113
S +RVI ++ R+ V+V VS Q A+IRVFE +
Sbjct: 66 SLYRVITIIADVGSTSRVKL---GVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEAL- 121
Query: 114 EVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGA--KIVMLPPPACA 171
V G V+ LL + V+GKGG + +R E+G +I P+CA
Sbjct: 122 NVRF-----GTSSTVSS-RLLMEACHVVTVIGKGGELMEMIRKETGCNVEICQYNLPSCA 175
Query: 172 AIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFN--------RPIEKVFYSN- 222
DD +++I G AVKK LV++++ LQ ++ K + N P E ++ ++
Sbjct: 176 DPDDVMVKIEGNVFAVKKVLVSISSRLQACQSIFKKKMVGNPHNMQTNVVPREALYRASN 235
Query: 223 --------SSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEV 274
S HRE P SL L+ P D + KQ+V
Sbjct: 236 VFQGDISVSRLKHRELDPLESLHRNLS--------------------QPRKDSEDNKQQV 275
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHS 334
L++L S +IG A +R LQ+ +GA I+ + E + TI+A E + ++S
Sbjct: 276 VLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTITASEDPNAKNS 335
Query: 335 PVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
P Q A VLVF++ E + SG ++ ++V ++ + CL G S ++
Sbjct: 336 PSQRALVLVFSKMYENTTAKVLDSGLT--SSITARLVVRSNQINCLMGEEGHIKSTIQQR 393
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
TG I ++ EQ C ++N+ ++QISG + NV+ A+++V LR +L
Sbjct: 394 TGAFITVLNVEQNPKCVSENNQIVQISGAFPNVKEAINQVTSMLREDL 441
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 215/469 (45%), Gaps = 64/469 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
++R++C GG+IG+SGSII SIR+ T I+ PG + R+I + S RR
Sbjct: 61 TYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI----SDTRR-- 114
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-------DDVAY-------- 130
D S QEA+ + ER+ E E +G G DD
Sbjct: 115 ---RDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGG 171
Query: 131 ------CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQI 180
L+ + +G ++GKGG+ + +MR+E+ +I +LP P C ++ ++++QI
Sbjct: 172 CGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQI 231
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPIC--FNRPIEKVFYSNSSDPHREFFPHLSLVP 238
G T AVKKA+ V++ L+ ++S + P E++F P ++ PH +
Sbjct: 232 VGDTNAVKKAIAIVSSRLRESQHRDRSHFHGRLHSP-ERIF-----PPEDDYVPHNARRL 285
Query: 239 PLTGNP-------SDNASEFHSSSADADRDHPGLDKKGRK------QEVALRMLFSGWTA 285
P+ G P S+ +SS PG +++ ++L
Sbjct: 286 PMDGRPFRPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKV 345
Query: 286 SGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFA 345
+IG+ I+ L+N G I + P+T S E+++ IS+ E D P Q A + +
Sbjct: 346 DSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQT 405
Query: 346 RSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGE 405
R V++ +K + V +LV + +GCL G S + EM+ +TG ++ +V E
Sbjct: 406 RIVDL--------VPDKENIVTTRLLVPSSDIGCLEGRDGSLL-EMKRLTGANVHIVPRE 456
Query: 406 QVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR 454
+ + D ++QI G+ K ++AL E+ RLR+ L +A P+
Sbjct: 457 DLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKEPFQKDASPQ 505
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 155/301 (51%), Gaps = 34/301 (11%)
Query: 179 QITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPI----EKVFYSNSSDPHREFFPHL 234
+I+G+ A +KAL+ V+TCLQ + S RP V DPH +
Sbjct: 69 EISGSFSAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPGVDPHSQ----R 124
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
S +PP + ++H+ + ++ PG + +QE+ RM+ G+IGK G+
Sbjct: 125 SYLPP------PHVPDYHARNFSSNGAAPG-PRFFVEQEIVFRMICLNDMVGGVIGKGGS 177
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
+R+LQ+ +GA + P+ S ER++ ISA E + SP Q+A + V+++ E
Sbjct: 178 TIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISE----- 232
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
+ +K +V +LV A +GCL G G S ++EM +TG I++ G EQ+ CA +N
Sbjct: 233 ---ASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRN 289
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR-----SPSGRVGGPALHKLH 469
D ++Q++G ++++Q+AL + GR+R +++ +P P VG P+ H+
Sbjct: 290 DELVQVTGSFQSIQDALLHITGRIR------DLIIPPKPHPSGGMPPYPPVGNPSHHQSR 343
Query: 470 Q 470
Q
Sbjct: 344 Q 344
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ + + GP + + FR++C +VGG+IG+ GS I +++ +T +
Sbjct: 135 YHARNFSSNGAAPGPRFFVEQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVID 194
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
SD R+I++ EN ++ S +Q+A++RV+ ++ E
Sbjct: 195 PVADSDERIIVISAR----------ENSEMMR----SPSQDALLRVYSKISEASM----- 235
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL IG ++GKGG + MR +GA I + P CA +D+L+Q
Sbjct: 236 -DKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQ 294
Query: 180 ITGATLAVKKALVAVT 195
+TG+ +++ AL+ +T
Sbjct: 295 VTGSFQSIQDALLHIT 310
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 139/243 (57%), Gaps = 21/243 (8%)
Query: 179 QITGAT-LAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV 237
+ITG++ +A+KKA++ VT+CLQ EK + + + S SS P SL+
Sbjct: 6 KITGSSSVAIKKAVIDVTSCLQDCPPYEKDEVDLSLGAGRRRRSGSSGE-----PMCSLL 60
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
P + N + D DH K + +V RM+ S A IIG G++VR
Sbjct: 61 PTYSENIA------------TDGDHK---KPNEQSQVQFRMICSHGAAGRIIGTGGSVVR 105
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
+LQN +GA I FA P+T S +R+VT+SALE L++ HSP QNA +LVFARS+E + ++ S
Sbjct: 106 ALQNQTGASIIFARPITNSDDRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARS 165
Query: 358 SGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVV 417
G + V ++L+ ++ V CL G G SEM + TG DI+++ G+Q A++ND V
Sbjct: 166 LGLIEEITVTATLLLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAV 225
Query: 418 IQI 420
+Q+
Sbjct: 226 VQV 228
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 16/143 (11%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FR++C G +IG GS++ +++ T I SD R++ V +++
Sbjct: 82 VQFRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTVSALENLE--- 138
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE-VEGDGDGDDVAYCG-LLANTTKIGV 142
S Q A++ VF R E + E G +++ LL + K+
Sbjct: 139 -----------SSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNKVYC 187
Query: 143 VVGKGGRNVTRMRIESGAKIVML 165
++G+GGR + M +GA I ++
Sbjct: 188 LIGRGGRVDSEMIETTGADIQIM 210
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 207/455 (45%), Gaps = 65/455 (14%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+R++C GG+IG+SG+II SIR+ T I+ PG + R+I + S RR
Sbjct: 76 SYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRR-- 129
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG------------- 132
D S QEA+ + +R+ E + + ++ Y G
Sbjct: 130 ---RDPEGRMPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATR 186
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
L+ + +G ++GKGG+ + +MRIE+ +I +LP P C ++ ++++Q+ G AVK
Sbjct: 187 LVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVK 246
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN----- 243
A+ +++ L+ ++S F+ P R FFP VP +
Sbjct: 247 NAIAIISSRLRESQHRDRS--------HGNFHGRMHSPER-FFPDDDYVPHMNNTGRRSS 297
Query: 244 ------------PSDNASEFHSSSA--DADRDHPGLD--KKGRKQEVALRMLFSGWTASG 287
P+ S + S + + P D + ++ RML +
Sbjct: 298 IDGPSFGSRASGPNYRNSNYSSRQYGYNVEAGAPVADSAQPFYGDDLVFRMLCPADKVNK 357
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
++G+ I+ LQN G + + P++ S E+++ IS+ E D P Q A + +
Sbjct: 358 VVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPAQEALLHIQTHI 417
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
+++ + + + ++V + +GCL G S +SEME +TG I+++ E++
Sbjct: 418 IDLV--------PDSDNIIKTKLIVSSGEIGCLEGRDGS-LSEMERLTGAKIQILPREKL 468
Query: 408 LGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
C ++ D ++QI GE K ++AL EV RLR L
Sbjct: 469 PACVSEADELVQIEGEIKAARDALVEVTSRLRSYL 503
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 31/206 (15%)
Query: 3 HHSNPYGYSSKRRGPLN------LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKC 56
+ S YGY+ + P+ DD+V FR++CP V ++G S I+ ++ D
Sbjct: 317 YSSRQYGYNVEAGAPVADSAQPFYGDDLV-FRMLCPADKVNKVVGESDGILDLLQNDIGV 375
Query: 57 RIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVE 116
+ GSD ++I++ D E+ QEA++ + + ++
Sbjct: 376 DVKVSDPVSGSDEQMIIISSEEGPD--------------DELFPAQEALLHIQTHIIDLV 421
Query: 117 AEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI 173
D D++ L+ ++ +IG + G+ G +++ M +GAKI +LP PAC +
Sbjct: 422 P------DSDNIIKTKLIVSSGEIGCLEGRDG-SLSEMERLTGAKIQILPREKLPACVSE 474
Query: 174 DDQLIQITGATLAVKKALVAVTTCLQ 199
D+L+QI G A + ALV VT+ L+
Sbjct: 475 ADELVQIEGEIKAARDALVEVTSRLR 500
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 218/455 (47%), Gaps = 62/455 (13%)
Query: 13 KRRGPLNL-----PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
KRR P + PDD V +R +C + +G +IGR G I +R DT+ +I PG
Sbjct: 24 KRRNPGDDTYAPGPDDTV-YRYLCTSRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGC 82
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDD 127
D RVI + S I E+ +V Q+A+ RV E++ + DG GD+
Sbjct: 83 DERVITIFSSSRETNTIEDTED-------KVCPAQDALFRVHEKL------IADDGPGDE 129
Query: 128 VAYCGL-------LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQL 177
GL L + +IG ++GKGG + +R ++G++I +L PAC D+L
Sbjct: 130 ENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERLPACGISGDEL 189
Query: 178 IQITGATLAVKKALVAVTTCL-------QHL---STMEKSPICFNRPIEKVFYSNSSDPH 227
+QI+G L V+KAL+ V++ L QHL S M+ P+ S+S+ P
Sbjct: 190 LQISGDPLVVRKALLQVSSRLHDNPSRSQHLQAPSLMQPYPVGSRNG------SSSTAPV 243
Query: 228 REFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG 287
P +V P G D ++ S D D +LR+L + G
Sbjct: 244 VGIAP---MVSPYGGYKGDMVGDWPSIYQPRREDSSAKD-------FSLRLLCAASDVGG 293
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
+IGK G I++ ++ SGA I + + + ++T+SA E+ + SP +A V + +
Sbjct: 294 VIGKGGGIIKQIRQESGAFIKVDSS-SAEDDCIITVSAKEFFEDPVSPTIDATVRLQPKC 352
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
E + SGE + +LV +GCL G G S ++E+ + +I+++ E V
Sbjct: 353 SEKTDPE---SGEP---SYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENV 406
Query: 408 LGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
A++++ ++QISG+ + ++AL ++ RL+ N
Sbjct: 407 PKVASEDEEMVQISGDLEVARHALVQITTRLKANF 441
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 252 HSSSADADRDHPGLDKKGR-KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+S + R +PG D + R L + IIG+ G I + L+ + A I
Sbjct: 17 YSENGGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIAKQLRTDTQAKIRIG 76
Query: 311 APLTKSGERVVTI-------SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKG 363
+ ERV+TI + +E + + P Q+A V + + +G G E
Sbjct: 77 ESVPGCDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEKLIADDGP-GDEENEEGL 135
Query: 364 DAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
V V +LV +D +GC+ G G + + TG+ I+++ E++ C D ++QISG+
Sbjct: 136 AQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERLPACGISGDELLQISGD 195
Query: 424 YKNVQNALSEVVGRLRHN 441
V+ AL +V RL N
Sbjct: 196 PLVVRKALLQVSSRLHDN 213
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 189/397 (47%), Gaps = 40/397 (10%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
D +R++CP+ V+G +IG+ G +I S+R++T+ +I PG D RVI V+ S + +
Sbjct: 40 DSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVI-VIFSSPLSK 98
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
++D E V Q+ ++RV + + + + D D LL ++IG
Sbjct: 99 DKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGS 158
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++GKGG N+ ++R ESGA+I +P P CA D+L+ I+G AVKKAL AV+ L
Sbjct: 159 LIGKGGNNIQKLRSESGAQI-QIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFL 217
Query: 199 QHLSTMEKSPICFNRP-----------IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD- 246
E+ P P + +N F H +L P+ G S
Sbjct: 218 FKHPPKEQIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRL 277
Query: 247 -----NASEFHSSSADADRDHPGLDK------KGRKQEVALRMLFSGWTASGIIGKRGAI 295
SE S+ ++ P K K +E ++R+L G+IGK G
Sbjct: 278 PGLGGYGSEAGSAWPLSNPALPSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNT 337
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
++S++N +GA I T+S ERV+ +SA E D R SP A +L+ QG
Sbjct: 338 IKSMRNDTGASIRVEDAQTESDERVIVVSATELADDRVSPTIEAVLLL----------QG 387
Query: 356 FSSGENKGD-AVAVSILVGADFVGCLTGSGSSAVSEM 391
+SG D A++ LV + +GCL G G + +SEM
Sbjct: 388 KTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNIISEM 424
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 252 HSSSADADRDHPGLDKKGRKQEV------ALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
H + + DR+ GR+Q + R+L +IGK G +++S++ + +
Sbjct: 14 HDLAENNDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRS 73
Query: 306 LISFAAPLTKSGERVVTI--SALEYLDTRHS-----------PVQNAAVLVFARSVEVEG 352
I A + ERV+ I S L + P Q+ L+ SV V+
Sbjct: 74 KIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDG--LLRVHSVIVQE 131
Query: 353 QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
G + +K +LV +G L G G + + ++ +G I++ +++ GCA
Sbjct: 132 SSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAF 191
Query: 413 QNDVVIQISGEYKNVQNALSEVVGRL 438
D ++ ISG+ V+ AL V L
Sbjct: 192 SFDELVVISGDAAAVKKALYAVSAFL 217
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++CP +GG+IG+ G+ I S+R DT I E SD RVI+V + D R
Sbjct: 317 SIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADDR-- 374
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
VS T EAV+ + + + G D D L + IG ++G
Sbjct: 375 ------------VSPTIEAVLLL-------QGKTSGTTDKDGAISTRFLVPSKHIGCLLG 415
Query: 146 KGGRNVTRMRIES 158
KGG ++ MR S
Sbjct: 416 KGGNIISEMRANS 428
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 195/408 (47%), Gaps = 38/408 (9%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D V +R++CP+ +GG+IG++G+I+ S+R +T+ +I PGS+ RVI++ S +
Sbjct: 44 PADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTK 102
Query: 81 DRRIMFCENDVVVEGGEVS-----STQEAVIRVFERMWEVE--AEVEGDGDGDDVAYCG- 132
+ ++D E + S + Q+A+++V +R+ E + + D D ++
Sbjct: 103 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 162
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKK 189
LL +G ++GK G + R+R E+GA I +LP P CA D+++QI+G K+
Sbjct: 163 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 222
Query: 190 ALVAVTTCLQHLSTMEKSPICFNRPI-EKVFYS------------NSSDPHREFFPHLSL 236
AL V+T L +K P F + + F+S NSS P R H
Sbjct: 223 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 282
Query: 237 VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIV 296
P G D S S S ++ P E ++++L S G+IGK G V
Sbjct: 283 STPWMGGYGDQPSRMGSGSINS---CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 339
Query: 297 RSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
+ LQ +GA I T S ERV+ SA E L S +A + + ++ E F
Sbjct: 340 KQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE------F 393
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
S KG + +LV + VGC+ G G ++EM T DI++VG
Sbjct: 394 SE---KG-TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 437
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI--SALEYLD 330
+ R+L G+IGK G IV+SL+ + A I+ A + S ERV+ I S +
Sbjct: 46 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 105
Query: 331 TR-----------------HSPVQNAAVLVFARSVEVEGQQGFSSGE-NKGDAVAVSILV 372
T+ H Q+A + V R +E + G +S + N+ + +LV
Sbjct: 106 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 165
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALS 432
+ VGCL G + + TG +I+++ +++ CA D ++QISG+ + AL
Sbjct: 166 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 225
Query: 433 EVVGRLRHN 441
EV L N
Sbjct: 226 EVSTLLHQN 234
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 56/454 (12%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSI 80
D++V +R++CP VVGG+IG+SG +I++IR +TK +I G RVI + S
Sbjct: 33 DELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEK 92
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGDGDGDDVAYCGLLANTT 138
I F ++ E + Q+A+++V++ + + E + + D DD C LL +
Sbjct: 93 QEEIGFTKS----ENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFS 148
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATLAVKKALV 192
+ ++GK G N+ R+R + A + ++ P CA D ++ I+G +VK+AL
Sbjct: 149 QSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALF 208
Query: 193 AVTTCLQHLSTMEKSPI---CFNRPIEKVF----YSNSSDPHREFFPHLS-LVPPLTGNP 244
AV+ + ++ E P+ + P V SNS P F+ + ++ G P
Sbjct: 209 AVSAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVP 268
Query: 245 SD----NASEFHSSSADADRDHP----------GLDKKGRKQEVALRMLFSGWTASGIIG 290
S + S+F + A P G R +E+ ++L +IG
Sbjct: 269 SYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIG 328
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSG--ERVVTISALEYLDTRHSPVQNAAVLVFARSV 348
K G+ ++ ++ ASG+ I TK G E V+ ++A E D S A +L+
Sbjct: 329 KGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLL----- 383
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
Q + + E+ + V + +LV + +GC+ G S ++E+ T +I + G++
Sbjct: 384 -----QEYINDED-AENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK-- 435
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
D ++++SGE +V++AL ++V RLR ++
Sbjct: 436 ------DDLVEVSGEVSSVRDALIQIVLRLREDV 463
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 133/328 (40%), Gaps = 58/328 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDT-KC------RIHCEGGFPGSDHRVILVVGSGS 79
F+++CP + +IG+ GS I IR + C R C G D VI+V + S
Sbjct: 314 FKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKC-----GDDECVIIVTATES 368
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
D S EAV+ + E + D D ++V LL ++
Sbjct: 369 PD--------------DMKSMAVEAVLLLQEYI--------NDEDAENVKM-QLLVSSKV 405
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
IG V+GK G + +R + A I + D L++++G +V+ AL+ + L+
Sbjct: 406 IGCVIGKSGSVINEIRKRTNANICI-----SKGKKDDLVEVSGEVSSVRDALIQIVLRLR 460
Query: 200 HLSTMEKSPICFNRPIEKV----FYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
+K + +P + F S SS+ +S + +G FH
Sbjct: 461 EDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSG--------FHGYG 512
Query: 256 ADADRDH----PGLDKKGR-KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ D+ G GR AL +L S ++GK G + +++ SGA+I +
Sbjct: 513 SFPAGDNVLGSTGPYSYGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEIS 572
Query: 311 APLTKSGERVVTIS-ALEYLDTRHSPVQ 337
A T G+ + +S LE + + VQ
Sbjct: 573 ASKTSHGDHIALLSGTLEQMRCAENLVQ 600
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
DK R + V R+L G+IGK G ++ ++++ + A I L +RV+TI
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 326 --------LEYLDTRHSPV---QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGA 374
+ + + + P+ Q+A + V+ V + + + ++ D +LV
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 147
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVG---GEQVLGCAAQNDVVIQISGEYKNVQNAL 431
L G + + T +K+V + CA + D V+ ISGE ++V+ AL
Sbjct: 148 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 207
Query: 432 SEV 434
V
Sbjct: 208 FAV 210
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 56/454 (12%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSI 80
D++V +R++CP VVGG+IG+SG +I++IR +TK +I G RVI + S
Sbjct: 33 DELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEK 92
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGDGDGDDVAYCGLLANTT 138
I F ++ E + Q+A+++V++ + + E + + D DD C LL +
Sbjct: 93 QEEIGFTKS----ENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFS 148
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATLAVKKALV 192
+ ++GK G N+ R+R + A + ++ P CA D ++ I+G +VK+AL
Sbjct: 149 QSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALF 208
Query: 193 AVTTCLQHLSTMEKSPI---CFNRPIEKVF----YSNSSDPHREFFPHLS-LVPPLTGNP 244
AV+ + ++ E P+ + P V SNS P F+ + ++ G P
Sbjct: 209 AVSAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVP 268
Query: 245 SD----NASEFHSSSADADRDHP----------GLDKKGRKQEVALRMLFSGWTASGIIG 290
S + S+F + A P G R +E+ ++L +IG
Sbjct: 269 SYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIG 328
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSG--ERVVTISALEYLDTRHSPVQNAAVLVFARSV 348
K G+ ++ ++ ASG+ I TK G E V+ ++A E D S A +L+
Sbjct: 329 KGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLL----- 383
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
Q + + E+ + V + +LV + +GC+ G S ++E+ T +I + G++
Sbjct: 384 -----QEYINDED-AENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK-- 435
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
D ++++SGE +V++AL ++V RLR ++
Sbjct: 436 ------DDLVEVSGEVSSVRDALIQIVLRLREDV 463
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
DK R + V R+L G+IGK G ++ ++++ + A I L +RV+TI
Sbjct: 28 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 87
Query: 326 --------LEYLDTRHSPV---QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGA 374
+ + + + P+ Q+A + V+ V + + + ++ D +LV
Sbjct: 88 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 147
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVG---GEQVLGCAAQNDVVIQISGEYKNVQNAL 431
L G + + T +K+V + CA + D V+ ISGE ++V+ AL
Sbjct: 148 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 207
Query: 432 SEV 434
V
Sbjct: 208 FAV 210
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 217/462 (46%), Gaps = 73/462 (15%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D++V +R++CP V+G +IG+SG +I+SIR++T+ +I FPG+ RVI +
Sbjct: 33 DELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITI------- 85
Query: 82 RRIMFC----ENDVVVEG-----GEVSSTQEAVIRVFERMWEVEAEVEGDGDGD--DVAY 130
FC + DV V+ + + Q+A+++V + GD D D
Sbjct: 86 ----FCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAAI-ANALASAGDLDRKQRDKEQ 140
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPA------CAAIDDQLIQITGAT 184
C +L +++ V+GK G + ++R ++ I + P A CA D I G
Sbjct: 141 CQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEP 200
Query: 185 LAVKKALVAVTTCLQHLSTMEKSPICFNR---------PIEKVFYSN-----SSDPHREF 230
V++AL A+++ + E+ P+ N P + YS S+DP
Sbjct: 201 EGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADP---I 257
Query: 231 FPHLSLVPPLTGN----------PSDNASEFHSSSADADRDHP-GLDKKGRKQEVALRML 279
P S +PP+ G S NA +SSS P G+ +E+ +R+L
Sbjct: 258 LPPRS-IPPMLGAQHVQDLHDYPESGNAWPLYSSSLPV---VPGGISGHPPSEELVVRVL 313
Query: 280 FSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNA 339
+IGK G ++S++ ASGA + E ++TIS+ E LD S +
Sbjct: 314 CPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKS-MAVE 372
Query: 340 AVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
VL+ + +++G V + +L+ + +GC+ G S ++E+ T DI
Sbjct: 373 TVLLLQEKI----------NDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
++ G++ L CA+ +D +++++G+ V++AL ++V RLR +
Sbjct: 423 RISKGDK-LKCASSSDELVEVTGKVGCVRDALVQIVLRLRDD 463
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P + + R++CP +G +IG+ G I SIR+ + R+ + D +I + S+
Sbjct: 304 PSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESL 363
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D S E V+ + E++ D +G V LL + I
Sbjct: 364 D--------------DLKSMAVETVLLLQEKI--------NDDEGGTVIM-RLLIPSKVI 400
Query: 141 GVVVGKGG------RNVTR--MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
G ++GK G R TR +RI G K+ CA+ D+L+++TG V+ ALV
Sbjct: 401 GCIIGKSGSIINEIRKSTRADIRISKGDKL------KCASSSDELVEVTGKVGCVRDALV 454
Query: 193 AVTTCLQHLSTMEK 206
+ L+ + E+
Sbjct: 455 QIVLRLRDDALKER 468
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 210/454 (46%), Gaps = 65/454 (14%)
Query: 3 HHSNPYGYS--SKRRGP--------LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRR 52
H + YG + SKRR P + + D V +R +CP +G +IGR G I +R
Sbjct: 79 HSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTV--YRYLCPVRKIGSIIGRGGDIAKQLRS 136
Query: 53 DTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFER 111
+TK I PG + RV+ + S E + + GE VS Q+A+ RV +R
Sbjct: 137 ETKSNIRIGETMPGCEERVVTIYSSSE--------ETNPFGDTGELVSPAQDALFRVHDR 188
Query: 112 MWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---P 168
+ E + + + +L + +IG V+GKGG+ + +R E+ A+I +L P
Sbjct: 189 IVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLP 248
Query: 169 ACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR 228
CA D+L+QI G V+KAL + + L +P R
Sbjct: 249 PCALSSDELLQIIGDASVVRKALHQLASRLHE------------------------NPSR 284
Query: 229 EFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGI 288
LS P + + D + ++S+ D + +E +LR++ G+
Sbjct: 285 SQHLLLSSSPNMYQSGGDWSHSYYSARRD----------ESSAKEFSLRLVCPTGNIGGV 334
Query: 289 IGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSV 348
IGK G I++ ++ SGA I + + + ++ ISA E+ + SP +AA+ + R
Sbjct: 335 IGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED-PSPTIDAALRLQPRCS 393
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
E + E+ V +LV + +GCL G G + +SEM VT +I+++ E +
Sbjct: 394 EK------AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLP 447
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
A+++D ++QI+GE NAL +V RL+ NL
Sbjct: 448 KVASEDDEMVQITGELNVASNALLQVTLRLKANL 481
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 215/457 (47%), Gaps = 65/457 (14%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D+++ +R++CP V+G +IG+SG +I+SIR+DT+ +I FPG+ RVI +
Sbjct: 34 DELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITI------- 86
Query: 82 RRIMFCENDVVV---------EGGEVSSTQEAVIRVFERMWEVEAEVEGD-GDGDDVAYC 131
+C + + Q+A+++V + A +E D C
Sbjct: 87 ----YCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEEC 142
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATL 185
+L +++ V+GK G + R+R ++ A I + P +CA D + I G +
Sbjct: 143 QILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSE 202
Query: 186 AVKKALVAVTTCLQHLSTMEKSP-------------ICFNRPIEKV--FY--SNSSDPHR 228
AVKKAL A++ + + E+ P I + PI FY ++S R
Sbjct: 203 AVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSAR 262
Query: 229 EFFPHLSL--VPPLTGNPSDNASEFHSSSADADRDHPGLDKKG--RKQEVALRMLFSGWT 284
P L+ VP L G SD S + S++ P + G R +E+ +R+L
Sbjct: 263 SVPPVLAATHVPELQGY-SDMGSTWPVYSSNL----PVVSGYGASRSEELIIRVLCPFDK 317
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVF 344
+IG+ G+ ++S++ ASGA + E ++T+++ E +D S A +L+
Sbjct: 318 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLQ 377
Query: 345 ARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
A+ + D VA+ +LV + +GC+ G S ++E+ T D+++
Sbjct: 378 AK-----------INDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKS 426
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
E+ CA ND +I++ GE +V++AL ++V RLR +
Sbjct: 427 ERP-KCADANDELIEVVGEVGSVRDALVQIVLRLRDD 462
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 25/211 (11%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
D+KG + + R+L +IGK G ++ S++ + A I P + +RV+TI
Sbjct: 29 DEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYC 88
Query: 326 L-----------EYLDTRH-SPVQNAAVLVFARSVEVEGQQGFSSGENK----GDAVAVS 369
E+ D + P Q+A + V A V +S EN D
Sbjct: 89 YVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIV-----NAVASLENSDKKKKDKEECQ 143
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV---LGCAAQNDVVIQISGEYKN 426
ILV + + G + + + T +IK+ + CA + D + I+G+ +
Sbjct: 144 ILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEA 203
Query: 427 VQNALSEVVGRLRHNLKSGEI-LNEARPRSP 456
V+ AL + + EI L+ P +P
Sbjct: 204 VKKALFAISAIMYKFTPREEIPLDTTVPEAP 234
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 215/457 (47%), Gaps = 65/457 (14%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D+++ +R++CP V+G +IG+SG +I+SIR+DT+ +I FPG+ RVI +
Sbjct: 34 DELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITI------- 86
Query: 82 RRIMFCENDVVV---------EGGEVSSTQEAVIRVFERMWEVEAEVEGD-GDGDDVAYC 131
+C + + Q+A+++V + A +E D C
Sbjct: 87 ----YCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEEC 142
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATL 185
+L +++ V+GK G + R+R ++ A I + P +CA D + I G +
Sbjct: 143 QILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSE 202
Query: 186 AVKKALVAVTTCLQHLSTMEKSP-------------ICFNRPIEKV--FY--SNSSDPHR 228
AVKKAL A++ + + E+ P I + PI FY ++S R
Sbjct: 203 AVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSAR 262
Query: 229 EFFPHLSL--VPPLTGNPSDNASEFHSSSADADRDHPGLDKKG--RKQEVALRMLFSGWT 284
P L+ VP L G SD S + S++ P + G R +E+ +R+L
Sbjct: 263 SVPPVLAATHVPELQGY-SDMGSTWPVYSSNL----PVVSGYGASRSEELIIRVLCPFDK 317
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVF 344
+IG+ G+ ++S++ ASGA + E ++T+++ E +D S A +L+
Sbjct: 318 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLQ 377
Query: 345 ARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
A+ + D VA+ +LV + +GC+ G S ++E+ T D+++
Sbjct: 378 AK-----------INDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKS 426
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
E+ CA ND +I++ GE +V++AL ++V RLR +
Sbjct: 427 ERP-KCADANDELIEVVGEVGSVRDALVQIVLRLRDD 462
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 25/211 (11%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
D+KG + + R+L +IGK G ++ S++ + A I P + +RV+TI
Sbjct: 29 DEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYC 88
Query: 326 L-----------EYLDTRH-SPVQNAAVLVFARSVEVEGQQGFSSGENK----GDAVAVS 369
E+ D + P Q+A + V A V +S EN D
Sbjct: 89 YVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIV-----NAVASLENSDKKKKDKEECQ 143
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV---LGCAAQNDVVIQISGEYKN 426
ILV + + G + + + T +IK+ + CA + D + I+G+ +
Sbjct: 144 ILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEA 203
Query: 427 VQNALSEVVGRLRHNLKSGEI-LNEARPRSP 456
V+ AL + + EI L+ P +P
Sbjct: 204 VKKALFAISAIMYKFTPREEIPLDTTVPEAP 234
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 217/462 (46%), Gaps = 73/462 (15%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D++V +R++CP V+G +IG+SG +I+SIR++T+ +I FPG+ RVI +
Sbjct: 33 DELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITI------- 85
Query: 82 RRIMFC----ENDVVVEG-----GEVSSTQEAVIRVFERMWEVEAEVEGDGDGD--DVAY 130
FC + DV V+ + + Q+A+++V + GD D D
Sbjct: 86 ----FCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAAI-ANALASAGDLDRKQRDKEQ 140
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPA------CAAIDDQLIQITGAT 184
C +L +++ V+GK G + ++R ++ I + P A CA D I G
Sbjct: 141 CQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEP 200
Query: 185 LAVKKALVAVTTCLQHLSTMEKSPICFNR---------PIEKVFYSN-----SSDPHREF 230
V++AL A+++ + E+ P+ N P + YS S+DP
Sbjct: 201 EGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADP---I 257
Query: 231 FPHLSLVPPLTGN----------PSDNASEFHSSSADADRDHP-GLDKKGRKQEVALRML 279
P S +PP+ G S NA +SSS P G+ +E+ +R+L
Sbjct: 258 LPPRS-IPPMLGAQHVQDLHDYPESGNAWPLYSSSLPV---VPGGISGHPPSEELVVRVL 313
Query: 280 FSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNA 339
+IGK G ++S++ ASGA + E ++TIS+ E LD S +
Sbjct: 314 CPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKS-MAVE 372
Query: 340 AVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
VL+ + +++G V + +L+ + +GC+ G S ++E+ T DI
Sbjct: 373 TVLLLQEKIN----------DDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
++ G++ L CA+ +D +++++G+ V++AL ++V RLR +
Sbjct: 423 RISKGDK-LKCASSSDELVEVTGKVGCVRDALVQIVLRLRDD 463
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P + + R++CP +G +IG+ G I SIR+ + R+ + D +I + S+
Sbjct: 304 PSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESL 363
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D S E V+ + E++ D +G V LL + I
Sbjct: 364 DDL--------------KSMAVETVLLLQEKI--------NDDEGGTVIM-RLLIPSKVI 400
Query: 141 GVVVGKGG------RNVTR--MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
G ++GK G R TR +RI G K+ CA+ D+L+++TG V+ ALV
Sbjct: 401 GCIIGKSGSIINEIRKSTRADIRISKGDKL------KCASSSDELVEVTGKVGCVRDALV 454
Query: 193 AVTTCLQHLSTMEK 206
+ L+ + E+
Sbjct: 455 QIVLRLRDDALKER 468
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 210/454 (46%), Gaps = 65/454 (14%)
Query: 3 HHSNPYGYS--SKRRGP--------LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRR 52
H + YG + SKRR P + + D V +R +CP +G +IGR G I +R
Sbjct: 13 HSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTV--YRYLCPVRKIGSIIGRGGDIAKQLRS 70
Query: 53 DTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFER 111
+TK I PG + RV+ + S E + + GE VS Q+A+ RV +R
Sbjct: 71 ETKSNIRIGETMPGCEERVVTIYSSSE--------ETNPFGDTGELVSPAQDALFRVHDR 122
Query: 112 MWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---P 168
+ E + + + +L + +IG V+GKGG+ + +R E+ A+I +L P
Sbjct: 123 IVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEHLP 182
Query: 169 ACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR 228
CA D+L+QI G V+KAL + + L +P R
Sbjct: 183 PCALSSDELLQIIGDASVVRKALHQLASRLHE------------------------NPSR 218
Query: 229 EFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGI 288
LS P + + D + ++S+ D + +E +LR++ G+
Sbjct: 219 SQHLLLSSSPNMYQSGGDWSHSYYSARRD----------ESSAKEFSLRLVCPTGNIGGV 268
Query: 289 IGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSV 348
IGK G I++ ++ SGA I + + + ++ ISA E+ + SP +AA+ + R
Sbjct: 269 IGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED-PSPTIDAALRLQPRCS 327
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
E + E+ V +LV + +GCL G G + +SEM VT +I+++ E +
Sbjct: 328 EK------AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLP 381
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
A+++D ++QI+GE NAL +V RL+ NL
Sbjct: 382 KVASEDDEMVQITGELNVASNALLQVTLRLKANL 415
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 211/463 (45%), Gaps = 76/463 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D +V +R++CP ++G +IG++G++I++IR+ T ++ +PG+D RVILV +
Sbjct: 38 DGLVLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVY--CYVK 95
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
R + E D + V + Q+A++RV + + D D + +L ++
Sbjct: 96 HRDLDAEVD---DNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEANILVPASQAS 152
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPP------ACAAIDDQLIQITGATLAVKKALVAVT 195
V+GK G + +R S A I + P +CA D +QITG AVKKAL V+
Sbjct: 153 NVIGKSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVS 212
Query: 196 TCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSS- 254
T + K P N P+E +S P P S++ P + P AS F+S+
Sbjct: 213 TIIY------KHPSKENIPLE------TSIPE----PTPSIIIP-SELPVYPASNFYSAP 255
Query: 255 SADADRDHPGL----------------DKKGR-------------------KQEVALRML 279
A HP L D GR E+ R+L
Sbjct: 256 DAAIPSVHPSLSILGSTHHVPELALPADDHGRLPIYPSILPVIPTYSAPKCSGELEFRVL 315
Query: 280 FSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNA 339
+IG+ GA +++++ SGA I E ++TI++ E +D S A
Sbjct: 316 CPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEA 375
Query: 340 AVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
+L+ A+ + E D + + +LV +GCL G G S V++M T +I
Sbjct: 376 VLLLQAKINDYE-----------DDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI 424
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ G++ A+ +D ++++SGE +++AL +++ RLR ++
Sbjct: 425 LISKGDKPRR-ASSSDELVEVSGEADKLRDALVQIILRLREDV 466
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 212/445 (47%), Gaps = 66/445 (14%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+R++C GG+IG+SGSII SIR+ T I+ PG + R+I + S RR
Sbjct: 5 SYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRR-- 58
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
D + S QEA+ + +R+ E +A G G+ G++ + +G ++G
Sbjct: 59 ---RDPEGRMPQFSPAQEALFMIHDRILESDA---GFGN-------GMVVSRMHVGCLLG 105
Query: 146 KGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
KGG+ + +MRIE+ +I +LP P C ++ ++++Q+ G AVK A+ +++ L+
Sbjct: 106 KGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRES 165
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHREFFP------HLSLVP---PLTGNP-------- 244
++S F+ I+ S P R FFP H++ P P+ GN
Sbjct: 166 QHRDRS--HFHGRIQ-------SSPER-FFPPDDDYSHMNNAPRRMPIDGNSFGSRVSTG 215
Query: 245 --SDNASEFHSSSADADRDH---PGLDKKGR--KQEVALRMLFSGWTASGIIGKRGAIVR 297
++ F S ++ + P D + +++ R+L ++G+ I+
Sbjct: 216 LVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIE 275
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
LQN G + A + S E+++ I++ E D P Q A + + R V +
Sbjct: 276 LLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLL------ 329
Query: 358 SGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVV 417
+K + + +LV + +GC G S +SEM +TG +I++V EQ+ + D +
Sbjct: 330 --PDKENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDEL 386
Query: 418 IQISGEYKNVQNALSEVVGRLRHNL 442
++I GE K ++AL EV RLR L
Sbjct: 387 LEIVGEIKAARDALVEVTSRLRSYL 411
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 25/192 (13%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
L +D+V FR++CP V ++G S II ++ + + GS+ ++I++
Sbjct: 248 LGEDIV-FRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEG 306
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
D E+ QEA++ + R+ + D ++V LL +++
Sbjct: 307 PD--------------DELFPAQEALLHIQTRIVNLLP------DKENVITTRLLVPSSE 346
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTT 196
IG G+ +++ MR +GA I ++P PA + D+L++I G A + ALV VT+
Sbjct: 347 IGCFEGRDC-SLSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALVEVTS 405
Query: 197 CLQHLSTMEKSP 208
L+ E P
Sbjct: 406 RLRSYLYREFFP 417
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 224/475 (47%), Gaps = 56/475 (11%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS--GS 79
D++V +R++CP VVGG+IG+SG +I++IR +TK +I G RVI + S
Sbjct: 35 DELVIYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEK 94
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
+ I F ++ E + Q+A+++V++ + + E D DD C LL +++
Sbjct: 95 KEEEIDFMKS----ETEPLCCAQDALLKVYDAIVASDEE-NIKIDRDDKKECLLLVPSSQ 149
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATLAVKKALVA 193
++GK G N+ R+R + A + ++ P CA D ++ I+G +VKKAL A
Sbjct: 150 SFSLIGKAGENIKRIRSTTRASVKVVSKDVSDPSHVCAMDYDNIVVISGEPESVKKALFA 209
Query: 194 VTTCLQHLSTMEKSPICF---NRPIEKVF---YSNSSDPHREFFPHLS-LVPPLTGNPSD 246
V+ L ++ E P+ + P + SNS P F+ + ++ G PS
Sbjct: 210 VSAILYKINPREHIPLDSTGQDVPASIIVSSDLSNSVYPQTGFYSNQDHILQQRAGVPSY 269
Query: 247 ----NASEFHSSSADADRDHP----------GLDKKGRKQEVALRMLFSGWTASGIIGKR 292
+ S F + A P G R +E+ L++L + +IGK
Sbjct: 270 FNALSVSNFQGYAETAANPMPVFASSLPVTHGFGGSSRSKELVLKVLCPLSNITRVIGKG 329
Query: 293 GAIVRSLQNASGALISFAAPLTKSG--ERVVTISALEYLDTRHSPVQNAAVLVFARSVEV 350
G+ ++ ++ SG+ I TK G E V+ ++A E D S A +L+
Sbjct: 330 GSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLL------- 382
Query: 351 EGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGC 410
Q + + E+ + V + + V + +GC+ G S ++E+ T +I + G++
Sbjct: 383 ---QEYINDED-AEKVKMQLFVSSKDIGCVIGKSGSVINEIRKRTNANICISKGKK---- 434
Query: 411 AAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPAL 465
D +++++GE +V+NA+ ++V RLR ++ G+ + A R P R +L
Sbjct: 435 ----DDLVEVAGEISSVRNAIIQIVLRLREDVL-GDRDSVAASRKPPARTDNYSL 484
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 81/184 (44%), Gaps = 18/184 (9%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
+K R + V R+L G+IGK G ++ ++++ + A I L +RV+TI
Sbjct: 30 EKINRDELVIYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 89
Query: 326 ---------LEYLDTRHSPV---QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
++++ + P+ Q+A + V+ V + + ++K + + +LV
Sbjct: 90 SVKEKKEEEIDFMKSETEPLCCAQDALLKVYDAIVASDEENIKIDRDDKKECL---LLVP 146
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVG---GEQVLGCAAQNDVVIQISGEYKNVQNA 430
+ L G + + T +K+V + CA D ++ ISGE ++V+ A
Sbjct: 147 SSQSFSLIGKAGENIKRIRSTTRASVKVVSKDVSDPSHVCAMDYDNIVVISGEPESVKKA 206
Query: 431 LSEV 434
L V
Sbjct: 207 LFAV 210
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 198/414 (47%), Gaps = 33/414 (7%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 87 CENDVVVEG-GEVSS---TQEAVIRVFERMW--EVEAEVEGDGDGDDVAYCGLLANTTKI 140
+ +G G + Q+A++++ +++ E+ EV D DDV +L ++
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVT-ARILVQGNQV 163
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GKGG + ++R ++GA I +L P CA D+L+QI+GA V+KAL ++T
Sbjct: 164 GCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTR 223
Query: 198 L-QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
L QH P NRP+E++ +++ H P L P+ + +
Sbjct: 224 LHQH-------PRKENRPLEQIIDASTQRKHES--PTLQHENPMLPH-LHSHHPPPIPLL 273
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA-PLTK 315
D R P +E ++R+L + +IGK GA VR ++ +GA I
Sbjct: 274 DPYRSGPQY-PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDA 332
Query: 316 SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGAD 375
SGER++ +S+ E SP A +L+ + V ++ SS ++V ++
Sbjct: 333 SGERLIIVSSNEIPTEPISPTIEALILLHDK-VSASSEKHHSS---------TRLVVPSN 382
Query: 376 FVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
VGC+ G G ++EM TG +I++ + D ++Q +G+ +++
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHGLED 436
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ HS+S D R H E R+L ++G+ G IV++L
Sbjct: 9 SNSKKRRHSNSDDGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTI----SALEYLDTR--------------HSPVQNAAV 341
+ + A I A + + ERV+ I + E D H Q+A +
Sbjct: 69 REETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALL 128
Query: 342 LVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+ + V E + E+ D V ILV + VGCL G G S + ++ TG I++
Sbjct: 129 KIHDKIVADEIYDEVAHDESSDD-VTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
Query: 402 VGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ E + CA Q+D ++QISG V+ AL E+ RL +
Sbjct: 188 LSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQH 227
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 24/160 (15%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 291 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 339
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++ E +S T EA+I + ++ V A E + L+ + K+G ++G
Sbjct: 340 VSSNEIPTE--PISPTIEALILLHDK---VSASSEKHH-----SSTRLVVPSNKVGCILG 389
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITG 182
+GG+ +T MR +GA+I + P + D+L+Q G
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAG 429
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 213/451 (47%), Gaps = 66/451 (14%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+R++C GG+IG+SGSII SIR+ T I+ PG + R+I + S RR
Sbjct: 61 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRR-- 114
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV----EGDGDGDDVAYCG--------- 132
D S QEA+ + +R+ E + + G G ++ Y G
Sbjct: 115 ---RDPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATR 171
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
L+ + +G ++GKGG+ + +MR+E+ +I +LP P C ++ ++++Q+ G AVK
Sbjct: 172 LVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVK 231
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR----EFFPHLSLV------P 238
A+ +++ L+ ++S F+ P R ++ PH++ P
Sbjct: 232 NAVAIISSRLRESQHRDRSH----------FHGRVHSPERLFDDDYAPHMNTRRSSMDGP 281
Query: 239 PLTGN--PSDNASEFHSSS------ADADRDHPGLD--KKGRKQEVALRMLFSGWTASGI 288
P G+ P N + SS ADA D P D + +++ R+L + +
Sbjct: 282 PSFGSRVPGSNYRNNNYSSRASGFAADAGAD-PIADSAQPFYVEDLVFRILCPIDKLNRV 340
Query: 289 IGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSV 348
+G+ IV LQN G + A P++ S E+++TI + E D P Q A + + R V
Sbjct: 341 VGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQTRIV 400
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
++ + +LV + +GCL G +S +SE+E +TG I+++ E++
Sbjct: 401 DLV--------PDNDHITTTRLLVRSSEIGCLEGRDAS-LSEIERLTGATIEILPKEKLP 451
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+ D ++QI GE + ++AL EV RLR
Sbjct: 452 SYLSGIDEIVQIEGEIRAARDALVEVTSRLR 482
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 213/445 (47%), Gaps = 42/445 (9%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
LP D V +R++CP+ +GG+IG+ G II +R +T+ +I PGSD RVI++ S
Sbjct: 41 LPVDTV-YRILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPE 99
Query: 80 IDRRIMFCENDVVVEGGE-----VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-- 132
R D+ +E + + Q+A+++V +R+ VE ++ G DD G
Sbjct: 100 KISRNHNDHEDLTMENEQDIMEPYCAAQDALLKVHDRI--VEEDLFGGMTSDDDNENGFV 157
Query: 133 ---LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLA 186
LL +G ++GK G + R+R E+GA I +LP P CA D+L+QI+
Sbjct: 158 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDV 217
Query: 187 VKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF-------FPHL----S 235
KKAL V+T L H + + P P + P + +PH S
Sbjct: 218 AKKALYEVSTLL-HQNPRKDKPPSVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSSHS 276
Query: 236 LVP-PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
+ P P+ G +S F D D P E ++++L S G+IGK G+
Sbjct: 277 IPPMPIMGRYGSQSSGFGPGGFD---DVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGS 333
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
V+ +Q +GA I +S ERV+ +SA E L S +A + + Q
Sbjct: 334 NVKVVQQDTGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQL---------QN 384
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
S KG + +LV + VGC+ G G ++EM T DI++ ++ CA+++
Sbjct: 385 KTSDFSEKG-TITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASED 443
Query: 415 DVVIQISGEYKNVQNALSEVVGRLR 439
+ ++QISG++ ++AL+E+ RLR
Sbjct: 444 EELVQISGKFGVAKDALAEIASRLR 468
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 7 PYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPG 66
P G+ RG + P S +++C +GG+IG+ GS + +++DT IH E
Sbjct: 295 PGGFDDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAE 354
Query: 67 SDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD 126
SD RVI V S ++ S T +A++++ + D
Sbjct: 355 SDERVIRVSASEAL--------------WNPRSQTIDAILQLQNKT--------SDFSEK 392
Query: 127 DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGA 183
LL ++K+G ++G+GG+ + MR + A I + P CA+ D++L+QI+G
Sbjct: 393 GTITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGK 452
Query: 184 TLAVKKALVAVTTCLQ 199
K AL + + L+
Sbjct: 453 FGVAKDALAEIASRLR 468
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 218/458 (47%), Gaps = 47/458 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP+ +GG+IG+ G+I+ ++R +T+ +I GSD RVI++ S R M
Sbjct: 46 YRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMD 105
Query: 87 CENDVVVEGGEVSS------TQEAVIRVFERMWEVEAEVEG-----DGDGDDVAYCGLLA 135
+ + G+ + Q+A+++V +R+ VE ++ G D + ++V LL
Sbjct: 106 GDEGLPAGNGQQEAFEPHCAAQDALLKVHDRI--VEEDLFGGMASDDDNDNNVVTARLLV 163
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALV 192
+G V+GK G + R+R E+GA I +LP P+CA D+L+QI+G K+AL
Sbjct: 164 PNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALY 223
Query: 193 AVTTCLQHLSTMEKSPI--------CFNRPIEKVFYSNSSDPHREFFPHLSLVP---PLT 241
++ L +K P F+ P + + +N P +PH + P P
Sbjct: 224 EISILLHQNPRKDKLPSVPMPYGGRTFHPPSDSM--ANMLPPGNPMWPHRNSTPHSMPWM 281
Query: 242 GNPSDNASEFHSSSADADRDHPGLDKKGRK--QEVALRMLFSGWTASGIIGKRGAIVRSL 299
G ++ SEF + PG GR+ E ++++L S G+IGK G+ V+ +
Sbjct: 282 GEYGNHPSEFGPGGFNGV--PPG---HGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIV 336
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
Q +GA I +S ER + +SA E L S +A + + Q S
Sbjct: 337 QQETGASIHVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQL---------QDKTSDF 387
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
KG + +LV + VGC+ G G ++EM DI++ CA+ ++ ++Q
Sbjct: 388 SEKG-MIITRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQ 446
Query: 420 ISGEYKNVQNALSEVVGRLR-HNLKSGEILNEARPRSP 456
ISG Y ++AL+E+ RLR L+ E P P
Sbjct: 447 ISGNYGVAKDALAEIASRLRARTLRDANAGTEPGPAGP 484
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 27/183 (14%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG-SGS 79
P S +++C T +GG+IG+ GS + ++++T IH E S+ R I V G
Sbjct: 307 PSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSAFEGL 366
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
+ R S T +A++++ ++ D + LL ++K
Sbjct: 367 WNPR---------------SQTIDAILQLQDKT--------SDFSEKGMIITRLLVPSSK 403
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTT 196
+G ++G+GG+ + MR A I + P P CA+ D++L+QI+G K AL + +
Sbjct: 404 VGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIAS 463
Query: 197 CLQ 199
L+
Sbjct: 464 RLR 466
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 134/258 (51%), Gaps = 22/258 (8%)
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G ++KAL+ VTTCLQ + S F DPH + +PP
Sbjct: 159 GRAYPLRKALLLVTTCLQDNPRPDAS--NFPPGRFGPPGPVGIDPHSQ----RGYLPP-- 210
Query: 242 GNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQN 301
+ ++H+ + ++ PG + +QE+ RM+ IIGK G+ +R+LQ+
Sbjct: 211 -----SMPDYHARNYSSNMAAPG-PRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQS 264
Query: 302 ASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+GA I P + S ERV+ ISA E + HSP Q+A + V +R E S +
Sbjct: 265 ETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISE--------SSMD 316
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
K AV +LV + +GCL G G S ++EM +TG I++ G EQ+ CA +ND ++Q++
Sbjct: 317 KSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVT 376
Query: 422 GEYKNVQNALSEVVGRLR 439
G ++++Q+AL + GR+R
Sbjct: 377 GSFQSIQDALLHITGRIR 394
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ Y + GP + + FR++C +VG +IG+ GS I +++ +T I
Sbjct: 215 YHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIE 274
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
S+ RVI++ EN ++ S Q+AV+RV R+ E
Sbjct: 275 PNSDSEERVIVISAH----------ENSEMMH----SPAQDAVLRVHSRISESSM----- 315
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL + IG ++GKGG + MR +GA I + P CA +D+L+Q
Sbjct: 316 -DKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQ 374
Query: 180 ITGATLAVKKALVAVT 195
+TG+ +++ AL+ +T
Sbjct: 375 VTGSFQSIQDALLHIT 390
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 194/427 (45%), Gaps = 68/427 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDE 104
Query: 87 CENDVVVEG-GEVSS---TQEAVIRVFERMW--EVEAEVEGDGD---GDDVAYCGLLANT 137
+ +G G S Q+A++++ +++ E+ EV D DDV +L
Sbjct: 105 AAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVT-ARILVQG 163
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
++G ++GKGG + ++R +GA I +LP P CA D+L+QI+GA V+KAL +
Sbjct: 164 NQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEI 223
Query: 195 TTCL-QHLSTMEKSPICFNRPIEKVF----------------YSNSSDPHREFFPHLSLV 237
+T L QH P NRP+E++ YS H + P + L+
Sbjct: 224 STRLHQH-------PRKENRPLEEIIDASTQRKRESPTLQHEYSMLPHLHSDHTPPIPLL 276
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
P P +E +E ++R+L + +IGK GA VR
Sbjct: 277 DPYRSGPQYPVTE--------------------TEEFSIRILCASELIGSVIGKSGANVR 316
Query: 298 SLQNASGALISFAA-PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
++ +GA I SGER++ IS+ E SP A +L+ + V ++
Sbjct: 317 RVEQQTGARIKVQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDK-VSAPSEKHH 375
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV 416
SS ++V + VGC+ G G +++M TG +I++ + +D
Sbjct: 376 SS---------TRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDE 426
Query: 417 VIQISGE 423
++Q +G+
Sbjct: 427 LVQAAGQ 433
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ HS+S D R H E R+L ++G+ G IV++L
Sbjct: 9 SNSKKRTHSNSDDGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTI-----------SALEYLDT-------RHSPVQNAAV 341
+ + A I A + + ERV+ I A E ++ H Q+A +
Sbjct: 69 REETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALL 128
Query: 342 LVFARSV--EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
+ + V E+ + D V ILV + VGCL G G S + ++ TG I
Sbjct: 129 KIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGI 188
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEILNE 450
+++ E + CA ++D ++QISG V+ AL E+ RL +H K L E
Sbjct: 189 RVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEE 240
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 24/183 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 294 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 342
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++ E +S EA+I + ++ V A E + L+ ++K+G ++G
Sbjct: 343 ISSNEIPAE--PISPAIEALILLHDK---VSAPSEKHH-----SSTRLVVPSSKVGCIIG 392
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
+GG+ +T MR +GA+I + P + DD+L+Q G + + + LS
Sbjct: 393 EGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHGREDYREPTSATGRFLS 452
Query: 203 TME 205
T+E
Sbjct: 453 TIE 455
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 58/462 (12%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSI 80
D++V +R++CP VVGG+IG+SG +I++IR +TK +I G RVI + S
Sbjct: 341 DELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEK 400
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGDGDGDDVAYCGLLANTT 138
I F ++ E + Q+A+++V++ + + E + + D DD C LL +
Sbjct: 401 QEEIGFTKS----ENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFS 456
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATLAVKKALV 192
+ ++GK G N+ R+R + A + ++ P CA D ++ I+G +VK+AL
Sbjct: 457 QSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALF 516
Query: 193 AVTTCLQHLSTMEKSPI---CFNRPIEKVF----YSNSSDPHREFFPHLS-LVPPLTGNP 244
AV+ + ++ E P+ + P V SNS P F+ + ++ G P
Sbjct: 517 AVSAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVP 576
Query: 245 SD----NASEFHSSSADADRDHP----------GLDKKGRKQEVALRMLFSGWTASGIIG 290
S + S+F + A P G R +E+ ++L +IG
Sbjct: 577 SYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIG 636
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSG--ERVVTISALEYLDTRHSPVQNAAVLVF---- 344
K G+ ++ ++ ASG+ I TK G E V+ ++A E L S VF
Sbjct: 637 KGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATEILFCCLS-----TPFVFMQSP 691
Query: 345 --ARSVEVEGQQGFSSGENKGDA--VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIK 400
+S+ VE N DA V + +LV + +GC+ G S ++E+ T +I
Sbjct: 692 DDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANIC 751
Query: 401 LVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ G++ D ++++SGE +V++AL ++V RLR ++
Sbjct: 752 ISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDV 785
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
DK R + V R+L G+IGK G ++ ++++ + A I L +RV+TI
Sbjct: 336 DKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYC 395
Query: 326 --------LEYLDTRHSPV---QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGA 374
+ + + + P+ Q+A + V+ V + + + ++ D +LV
Sbjct: 396 SVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPF 455
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVG---GEQVLGCAAQNDVVIQISGEYKNVQNAL 431
L G + + T +K+V + CA + D V+ ISGE ++V+ AL
Sbjct: 456 SQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQAL 515
Query: 432 SEV 434
V
Sbjct: 516 FAV 518
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 187/386 (48%), Gaps = 33/386 (8%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G I+ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDE 104
Query: 87 CENDVVVEG-GEVSS---TQEAVIRVFERMW--EVEAEVEGDGDGDDVAYCGLLANTTKI 140
+ +G G + Q+A++++ +++ E+ EV D DDV +L ++
Sbjct: 105 AAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVT-ARILVQGNQV 163
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GKGG + ++R ++GA I +L P CA D+L+QI+GA V+KAL ++T
Sbjct: 164 GCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTR 223
Query: 198 L-QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
L QH P NRP+E++ +++ H P L P+ + +
Sbjct: 224 LHQH-------PRKENRPLEQIIDASTQRKHES--PTLQHENPMLPH-LHSHHPPPIPLL 273
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA-PLTK 315
D R P +E ++R+L + +IGK GA VR ++ +GA I
Sbjct: 274 DPYRSGPQY-PVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDA 332
Query: 316 SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGAD 375
SGER++ +S+ E SP A +L+ + V ++ SS ++V ++
Sbjct: 333 SGERLIIVSSNEIPTEPISPTIEALILLHDK-VSASSEKHHSS---------TRLVVPSN 382
Query: 376 FVGCLTGSGSSAVSEMEDVTGTDIKL 401
VGC+ G G ++EM TG +I++
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRV 408
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ HS+S D R H E R+L ++G+ G IV++L
Sbjct: 9 SNSKKRRHSNSDDGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTI----SALEYLDTR--------------HSPVQNAAV 341
+ + A I A + + ERV+ I + E D H Q+A +
Sbjct: 69 REETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALL 128
Query: 342 LVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+ + V E + E+ D A ILV + VGCL G G S + ++ TG I++
Sbjct: 129 KIHDKIVADEIYDEVAHDESSDDVTA-RILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRV 187
Query: 402 VGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ E + CA Q+D ++QISG V+ AL E+ RL +
Sbjct: 188 LSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQH 227
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 24/159 (15%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 291 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 339
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++ E +S T EA+I + ++ V A E + L+ + K+G ++G
Sbjct: 340 VSSNEIPTE--PISPTIEALILLHDK---VSASSEKHH-----SSTRLVVPSNKVGCILG 389
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQIT 181
+GG+ +T MR +GA+I + P + D+L+Q+T
Sbjct: 390 EGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVT 428
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 209/462 (45%), Gaps = 64/462 (13%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
+++++R++CP V+G +IG++G +I+SIR++++ ++ FPG+ HRVI + +
Sbjct: 40 ELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIF--CHVKN 97
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD----DVAYCGLLANTT 138
+ D + + Q+A+I+V + +E GD + + C +L ++
Sbjct: 98 KEEIEIEDEFDNEKPLCAAQDALIKVHS---AISNSIETAGDSEKKRKNKDECQILVPSS 154
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPA------CAAIDDQLIQITGATLAVKKALV 192
+ +++GK G + ++R+++ I ++P A CA D + + G + AVK+AL
Sbjct: 155 QSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFV-LVGESEAVKRALF 213
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP-HLSLVPPLTGNPSDN---- 247
AV+T + S E P+ P PH P L + PP P+ +
Sbjct: 214 AVSTIMYKFSPKEDIPLDTTVP---------ETPHSIIIPSELPIYPPGGLYPASDPIVQ 264
Query: 248 ------------ASEFHSSSADADRDHPGLDK---------KGRKQEVALRMLFSGWTAS 286
+ H AD P + +E+ +RML
Sbjct: 265 PRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPLPVVSSLGASQSEELIVRMLCPSDKIG 324
Query: 287 GIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR 346
+IGK G ++ ++ ASGA I + E ++TI+A E S V AVL+
Sbjct: 325 QLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSDLKS-VAVEAVLLLQE 383
Query: 347 SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQ 406
+ E V++ +LV + +GC+ G + ++E+ T DI++ +
Sbjct: 384 KINDEDDA----------PVSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQISRSNK 433
Query: 407 VLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN-LKSGEI 447
A ND ++++ GE V++AL ++V RLR + LK+ +I
Sbjct: 434 P-KYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNKDI 474
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 60/327 (18%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFC 87
R++CP+ +G LIG+ G I +R+ + RI + D +I + + S
Sbjct: 315 RMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATEST------- 367
Query: 88 ENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV-AYCGLLANTTKIGVVVGK 146
+D+ S EAV+ + E++ D DD LL + IG ++G+
Sbjct: 368 -SDLK------SVAVEAVLLLQEKI----------NDEDDAPVSIRLLVPSKVIGCIIGR 410
Query: 147 GGR--NVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
G N R R ++ +I P A +D+L+++ G V+ AL+ + L+ +
Sbjct: 411 SGAIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLRE-DVL 469
Query: 205 EKSPICFNRPI--EKVFYSNS--SDPHREFFPHLSLVP---PLTGNPSDNASE----FHS 253
+ I NR I E ++ S+S S P P LS +P P S HS
Sbjct: 470 KNKDIDHNRHIGSESLYASSSVLSAP-----PMLSSIPATAPALAYDQRTGSGTGLGMHS 524
Query: 254 SSADADRDHPGLDKKGRKQEVA----------------LRMLFSGWTASGIIGKRGAIVR 297
S + D ++ G + L M+ ++GK GA +
Sbjct: 525 SRSHYGYDSYSMEDNGYGSMSSYATNLYEGHRLPPLSTLEMVVPANAVGKVMGKGGANLA 584
Query: 298 SLQNASGALISFAAPLTKSGERVVTIS 324
+++ SGA + + + G+RV IS
Sbjct: 585 NIRKISGATVEISESKSYRGDRVALIS 611
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Query: 18 LNLPDDV-VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
+N DD VS RL+ P+ V+G +IGRSG+II+ IR+ TK I
Sbjct: 385 INDEDDAPVSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQISRS------------- 431
Query: 77 SGSIDRRIMFCENDVVVE-GGEVSSTQEAVIRVFERMWE 114
++ +ND +VE GEV ++A+I++ R+ E
Sbjct: 432 ----NKPKYADDNDELVEVVGEVDCVRDALIQIVLRLRE 466
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI-- 323
D++ + + +A R+L +IGK G ++ S++ S A + P + RV+TI
Sbjct: 34 DERDKGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKHRVITIFC 93
Query: 324 -------SALEYLDTRHSPV---QNAAVLV---FARSVEVEGQQGFSSGENKGDAVAVSI 370
+E P+ Q+A + V + S+E G S + + + I
Sbjct: 94 HVKNKEEIEIEDEFDNEKPLCAAQDALIKVHSAISNSIETAGD----SEKKRKNKDECQI 149
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV---GGEQVLGCAAQNDVVIQISGEYKNV 427
LV + L G + + ++ T T+IK+V + CA + D + + GE + V
Sbjct: 150 LVPSSQSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNFVLV-GESEAV 208
Query: 428 QNALSEV 434
+ AL V
Sbjct: 209 KRALFAV 215
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 189/423 (44%), Gaps = 43/423 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP G +IGR G I IR +TK + PG D RV+ + + RI
Sbjct: 20 YRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETNRIED 79
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
E D V + +I E + + + + +L + +IG ++GK
Sbjct: 80 DE-DFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCLIGK 138
Query: 147 GGRNVTRMRIESGAKIVM----LPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
GG+ + ++R ++ A+I + LP A A D+L+QI G AV++AL V L
Sbjct: 139 GGQVIQKLRNDTNAQIRVINDNLPICALALSHDELLQIIGDPSAVREALYQVAFLL---- 194
Query: 203 TMEKSPICFNRP--IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
++ P + F S+SS + P L+ P + N S A R
Sbjct: 195 --------YDNPSRFQNYFLSSSSTLQHQ--PGGILMSPAITSSHKNYS--------APR 236
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER- 319
D + ++ + G+IGK G + + SGA I P T +
Sbjct: 237 D------AADARVFSICFICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDDC 290
Query: 320 VVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGC 379
++ ISA E+ + + SP NAA+ + R E G+ S A++ +L+ + VGC
Sbjct: 291 IIFISAKEFFEDQ-SPTVNAALRLQTRCSEKVGKDSSDS------AISTRVLIPSSQVGC 343
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
L G G + +SEM VT +I++ GE V A +N+ ++QI+G AL++V+ RLR
Sbjct: 344 LIGKGGALISEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLR 403
Query: 440 HNL 442
N+
Sbjct: 404 ANV 406
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 38/233 (16%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
V S +CP VGG+IG+ G I+ R+++ I D I+ + +
Sbjct: 243 VFSICFICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISAKE---- 298
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
F E+ S T A +R+ R +E G D +L ++++G +
Sbjct: 299 --FFEDQ--------SPTVNAALRLQTRC----SEKVGKDSSDSAISTRVLIPSSQVGCL 344
Query: 144 VGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ- 199
+GKGG ++ MR + A I + P A +++++QITG+ A KAL V L+
Sbjct: 345 IGKGGALISEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRA 404
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
++ M++ + FFP++S + P E H
Sbjct: 405 NVFDMDRGLVLLP----------------TFFPYISQTIETSSKPRHRKGENH 441
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 24/222 (10%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA------ 325
++ R L A IIG+ G I + +++ + A + L ERVVTI +
Sbjct: 16 EDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETN 75
Query: 326 -LEYLDTRHSPVQNAAV----LVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCL 380
+E + P +A ++ A + +G ++ V V +LV +D +GCL
Sbjct: 76 RIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCL 135
Query: 381 TGSGSSAVSEMEDVTGTDIKLVGGE-QVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
G G + ++ + T I+++ + A +D ++QI G+ V+ AL +V L
Sbjct: 136 IGKGGQVIQKLRNDTNAQIRVINDNLPICALALSHDELLQIIGDPSAVREALYQVAFLLY 195
Query: 440 HN--------LKSGEILNEARPRSPSGRVGGPALHKLHQSVA 473
N L S L P G + PA+ H++ +
Sbjct: 196 DNPSRFQNYFLSSSSTLQH----QPGGILMSPAITSSHKNYS 233
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 209/444 (47%), Gaps = 52/444 (11%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP+ +GG+IG+ G I+ ++R +T+ +I PGSD RVI++ + + + +
Sbjct: 47 YRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHD 106
Query: 87 CENDVVVEGGE-----VSSTQEAVIRVFERMWEVE----AEVEGDGDGDDVAYCGLLANT 137
D +E + Q+A+++V ER+ E + E E D + + V LL
Sbjct: 107 SNEDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNE-NTVVTARLLVPN 165
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
+G ++GK G + R+R E+GA I +LP P CA D+L+QI+G KKAL V
Sbjct: 166 NMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEV 225
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSL--VPPLTGNPSDNASEFH 252
+T L +K P F P+ F P P S+ +PP GNP + +
Sbjct: 226 STLLHQNPRKDKPPSSF--PMS--FGGQGFHP-----PGASMGNMPP-PGNPMWSNRNSN 275
Query: 253 SSSAD------ADRDHPGLDKKG-----------RKQEVALRMLFSGWTASGIIGKRGAI 295
S R P + G E ++++L G+IGK G
Sbjct: 276 SQGVPPMPWMGGYRSQPSVVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFN 335
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
V+ LQ +GA I L +S ERV+ +S+ E L S A + + ++ E + G
Sbjct: 336 VKQLQQETGASIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGG 395
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
++ +LV + VGC+ G G ++EM T DI++ E CA+ ++
Sbjct: 396 MTT----------RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDE 445
Query: 416 VVIQISGEYKNVQNALSEVVGRLR 439
++QISG + ++AL+E+ RLR
Sbjct: 446 ELVQISGNFGVAKDALAEIASRLR 469
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 333 HSPVQNAAVLVFARSVEVE--GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
H P Q+A + V R +E + G F +N+ V +LV + VGCL G +
Sbjct: 123 HCPAQDALMKVHERIIEEDLFGGTEFED-DNENTVVTARLLVPNNMVGCLLGKRGDVIQR 181
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLK 443
+ TG +I+++ E + CA +D ++QISG+ + AL EV L N +
Sbjct: 182 LRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPR 234
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S +++CP +GG+IG+ G + ++++T IH E S+ RVI V ++
Sbjct: 314 FSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEAL---- 369
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
S T EA++++ + E D G LL ++K+G ++
Sbjct: 370 ----------WNPRSQTIEAILQLQNKTSEYS-----DKGGMTTR---LLVPSSKVGCIL 411
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+GG + MR + A I + P CA+ D++L+QI+G K AL + + L+
Sbjct: 412 GQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 469
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 207/463 (44%), Gaps = 79/463 (17%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D +V +R++CP ++G +IG+ G++I++IR T ++ +PG+D RVILV +
Sbjct: 38 DGLVLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVY--CYVK 95
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV---EGDGDGDDVAYCGLLANTT 138
R + E D + V + Q+A++RV + + + D D +L +
Sbjct: 96 HRDLDAEGD---DNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPAS 152
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPP------ACAAIDDQLIQITGATLAVKKALV 192
+ V+GK G + +R S A I + P +CA D +QITG AVKKAL
Sbjct: 153 QASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALF 212
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
V+T + K P N P+E +S P P S++ P + P AS F+
Sbjct: 213 GVSTIIY------KHPSKENIPLE------TSIPD----PTPSIIIP-SELPVYPASNFY 255
Query: 253 SS-SADADRDHPGL----------------DKKGR-------------------KQEVAL 276
S+ A HP + D GR E+
Sbjct: 256 SAPDAAIPSVHPSMSVLGSTRHVPELAVPADDHGRLPIYQSILPVIPTYSAPKCSGELEF 315
Query: 277 RMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPV 336
R+L G +IG+ GA +++++ SGA I E ++TI + E D S
Sbjct: 316 RVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAA 375
Query: 337 QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTG 396
A +L+ A+ +++ D + + +LV +GCL G G S V++M T
Sbjct: 376 VEAVLLLQAK-----------INDSEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTK 424
Query: 397 TDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+I + G++ A+ +D ++++SGE +++AL +++ RLR
Sbjct: 425 ANILISKGDKPRR-ASSSDELVEVSGEADKLRDALVQIILRLR 466
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 50/334 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ FR++CP +G +IGR G+ I +IR+++ RI + + +I ++ + S D
Sbjct: 313 LEFRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTD--- 369
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
DV S+ EAV+ + ++ + E DD LL IG ++
Sbjct: 370 -----DV------KSAAVEAVLLLQAKINDSE---------DDRMNLRLLVPNKVIGCLI 409
Query: 145 GKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
G+GG V MR ++ A I++ P A+ D+L++++G ++ ALV + L+ +
Sbjct: 410 GRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLRE-A 468
Query: 203 TMEKSPICFNRPIEKVFYSNSSD-------PHREFFPHLSLVPPL----TGNPSDNASEF 251
+++S N + +SD P PH + PL G P F
Sbjct: 469 VLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAPLGYDRRGEPERALEVF 528
Query: 252 -------HSSSADADRDH---PGLDKKGRKQEVA-LRMLFSGWTASGIIGKRGAIVRSLQ 300
+SS D + P K ++ V L M S ++GK G + +++
Sbjct: 529 PRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASGISKVMGKHGTNLDNIR 588
Query: 301 NASGALISFAAPLTKSGERVVTISALEYLDTRHS 334
SGA I P + E + IS + RHS
Sbjct: 589 KISGAHIEIIEPKSSRHEHIAYISGTS--EQRHS 620
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 18/94 (19%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
DD ++ RL+ P V+G LIGR GSI++ +R+ TK I ++ G
Sbjct: 391 DDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI---------------LISKGDKP 435
Query: 82 RRIMFCENDVVVE-GGEVSSTQEAVIRVFERMWE 114
RR +D +VE GE ++A++++ R+ E
Sbjct: 436 RRA--SSSDELVEVSGEADKLRDALVQIILRLRE 467
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 199/432 (46%), Gaps = 77/432 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP +G ++GR G ++ ++R +TK +I PG+D RVI++ +
Sbjct: 45 YRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQN------- 97
Query: 87 CENDVVVEGGEVSST------------QEAVIRVFERMWEVE-----AEVEGDGDGDDVA 129
+ ++ E E + Q+A++++ +++ E A E DDV
Sbjct: 98 -QPELTDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVT 156
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLA 186
+L ++G ++GKGG + ++R ++GA I +LP P CA D+L+QI+GA
Sbjct: 157 -ARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSL 215
Query: 187 VKKALVAVTTCL-QHLSTMEKSPICFNRPIEKVFYSNSSDPHRE----------FFPHL- 234
V+KAL ++T L QH P NRP+E++ + S+ RE PHL
Sbjct: 216 VRKALYEISTRLHQH-------PRKENRPLEEIINA-STQRKRESPILLQHENPMLPHLH 267
Query: 235 -SLVPPL-TGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKR 292
PP+ +P + ++H + + E ++R+L + +IGK
Sbjct: 268 SDHPPPIPLLDPYRSGLQYHVTETE---------------EFSIRILCASELIGSVIGKS 312
Query: 293 GAIVRSLQNASGALISFAA-PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVE 351
GA V+ ++ +GA I SGE ++ +S+ E SP A +L+ + V
Sbjct: 313 GANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKEVPSEPISPAIEALILLHDK-VSAP 371
Query: 352 GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA 411
++ SS ++V + VGC+ G G ++EM TG +I++
Sbjct: 372 SEKRHSS---------TRLVVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYL 422
Query: 412 AQNDVVIQISGE 423
+ +D ++Q +G+
Sbjct: 423 SFDDELVQTAGQ 434
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 30/240 (12%)
Query: 245 SDNASEFHSSSADADRD-----HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S++ +S+S D R H E R+L ++G+ G +V++L
Sbjct: 9 SNSKKRTYSNSEDRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGGDVVKAL 68
Query: 300 QNASGALISFAAPLTKSGERVVTISAL--------EYLDTR----------HSPVQNAAV 341
+ + A I A P+ + ERV+ I E +T+ H Q+A +
Sbjct: 69 REETKAKIRVADPIPGADERVIIIFNYQNQPELTDEAAETKFSDGLGNMKPHCFAQDALL 128
Query: 342 LVFARSVEVEGQQGFSSGENK--GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
+ + V E G + E D V ILV + VGCL G G S + ++ TG I
Sbjct: 129 KIHDKIVADEIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGI 188
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-----RHNLKSGEILNEARPR 454
+++ E + CA ++D ++QISG V+ AL E+ RL + N EI+N + R
Sbjct: 189 RVLPSEDLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIINASTQR 248
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI + + +++V S
Sbjct: 295 SIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKE------ 348
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
V +S EA+I + ++ V A E + L+ ++K+G ++G
Sbjct: 349 -------VPSEPISPAIEALILLHDK---VSAPSEKRH-----SSTRLVVPSSKVGCILG 393
Query: 146 KGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
+GG+ +T MR +GA+I + P + DD+L+Q G + ++ +T+ LS
Sbjct: 394 EGGKVITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAG-QIHGREDYRGLTSATGFLS 452
Query: 203 TME 205
T+E
Sbjct: 453 TIE 455
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 208/444 (46%), Gaps = 52/444 (11%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R++CP+ +GG+IG+ G I+ ++R +T+ +I PGSD RVI++ + + + +
Sbjct: 75 YRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHN 134
Query: 87 CENDVVVEGGE-----VSSTQEAVIRVFERMWEVE----AEVEGDGDGDDVAYCGLLANT 137
D E + Q+A+++V ER+ E + E E D + + V LL
Sbjct: 135 SNEDPEREEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNE-NTVVTARLLVPN 193
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAV 194
+G ++GK G + R+R E+GA I +LP P CA D+L+QI+G KKAL V
Sbjct: 194 NMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEV 253
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSL--VPPLTGNPSDNASEFH 252
+T L +K P F P+ F P P S+ +PP GNP + +
Sbjct: 254 STLLHQNPRKDKPPSSF--PMS--FGGQGFHP-----PGASMGNMPP-PGNPMWSNRNSN 303
Query: 253 SSSAD------ADRDHPGLDKKG-----------RKQEVALRMLFSGWTASGIIGKRGAI 295
S R P + G E ++++L G+IGK G
Sbjct: 304 SQGVPPMPWMGGYRSQPSVVPGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFN 363
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
V+ LQ +GA I L +S ERV+ +S+ E L S A + + ++ E + G
Sbjct: 364 VKQLQQETGASIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGG 423
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
++ +LV + VGC+ G G ++EM T DI++ E CA+ ++
Sbjct: 424 MTT----------RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDE 473
Query: 416 VVIQISGEYKNVQNALSEVVGRLR 439
++QISG + ++AL+E+ RLR
Sbjct: 474 ELVQISGNFGVAKDALAEIASRLR 497
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 333 HSPVQNAAVLVFARSVEVE--GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
H P Q+A + V R +E + G F +N+ V +LV + VGCL G +
Sbjct: 151 HCPAQDALMKVHERIIEEDLFGGTEFED-DNENTVVTARLLVPNNMVGCLLGKRGDVIQR 209
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ TG +I+++ E + CA +D ++QISG+ + AL EV L N
Sbjct: 210 LRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQN 260
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S +++CP +GG+IG+ G + ++++T IH E S+ RVI V ++
Sbjct: 342 FSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEAL---- 397
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
S T EA++++ + E D G LL ++K+G ++
Sbjct: 398 ----------WNPRSQTIEAILQLQNKTSEYS-----DKGGMTTR---LLVPSSKVGCIL 439
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+GG + MR + A I + P CA+ D++L+QI+G K AL + + L+
Sbjct: 440 GQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 497
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 110/190 (57%), Gaps = 9/190 (4%)
Query: 250 EFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
++H+ + ++ PG + +QE+ RM+ IIGK G+ +R+LQ+ +GA I
Sbjct: 3 DYHARNYSSNMAAPG-PRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKI 61
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
P + S ERV+ ISA E + HSP Q+A + V +R E S +K AV
Sbjct: 62 IEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISE--------SSMDKSSAVTAR 113
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
+LV + +GCL G G S ++EM +TG I++ G EQ+ CA +ND ++Q++G ++++Q+
Sbjct: 114 LLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQD 173
Query: 430 ALSEVVGRLR 439
AL + GR+R
Sbjct: 174 ALLHITGRIR 183
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ Y + GP + + FR++C +VG +IG+ GS I +++ +T I
Sbjct: 4 YHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIE 63
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
S+ RVI++ EN ++ S Q+AV+RV R+ E
Sbjct: 64 PNSDSEERVIVISAH----------ENSEMMH----SPAQDAVLRVHSRISESSM----- 104
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQ 179
D LL + IG ++GKGG + MR +GA I + P CA +D+L+Q
Sbjct: 105 -DKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQ 163
Query: 180 ITGATLAVKKALVAVT 195
+TG+ +++ AL+ +T
Sbjct: 164 VTGSFQSIQDALLHIT 179
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 165/328 (50%), Gaps = 21/328 (6%)
Query: 120 EGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQ 176
+ D +G L+ + +IG ++GKGG+ V +R E+GA+I +L P CA D+
Sbjct: 4 DDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTDE 63
Query: 177 LIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSL 236
L+QI+G VKKAL + T L H + + F+ + V+ + S P + +
Sbjct: 64 LVQISGEVAVVKKALYQIATRL-HENPSRTQHLLFS-AVPNVYPATGSLIGPTGAPIVGI 121
Query: 237 VPPLT--GNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
P ++ G +A ++ S A RD +E +LR++ G+IGK G
Sbjct: 122 APLMSTYGGYKGDAGDWSRSLYSAPRDELS------SKEFSLRIVCPTGNIGGVIGKGGT 175
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE-VEGQ 353
I+ ++ SGA+I + + + ++T+SA E+ D ++SP AA+ + R E +
Sbjct: 176 IINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQPRCSEKIARD 235
Query: 354 QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQ 413
G S + +LV +GCL G G ++EM VT +I+++G + + A++
Sbjct: 236 SGLISFTTR-------LLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASE 288
Query: 414 NDVVIQISGEYKNVQNALSEVVGRLRHN 441
+D ++QISG+ ++AL+ V RLR N
Sbjct: 289 DDEMVQISGDLDVAKDALTHVSRRLRAN 316
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 23/178 (12%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R+VCPT +GG+IG+ G+II+ IR+++ I + D +I V D
Sbjct: 156 SLRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFD---- 211
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-LLANTTKIGVVV 144
+ S T EA IR+ R E A D +++ LL T++IG ++
Sbjct: 212 ----------DQYSPTIEAAIRLQPRCSEKIAR-----DSGLISFTTRLLVPTSRIGCLL 256
Query: 145 GKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
GKGG + MR + A I +L P A+ DD+++QI+G K AL V+ L+
Sbjct: 257 GKGGVIINEMRKVTKANIRILGKDNLPKVASEDDEMVQISGDLDVAKDALTHVSRRLR 314
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 216/459 (47%), Gaps = 67/459 (14%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D+++ +R++CP V+G +IG++G +I+SIR++T+ ++ FPGS RVI +
Sbjct: 34 DELIVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITI------- 86
Query: 82 RRIMFC----ENDVVVE----GGE-VSSTQEAVIRVFERMWEVEAEVEGDGDG--DDVAY 130
+C + DV ++ G E + + Q+A+++V + A + GD + D
Sbjct: 87 ----YCYVKEKEDVEIDDEFAGKEPLCAAQDALLKVHVAIANSIAAI-GDSEKKRKDRDE 141
Query: 131 CGLLANTTKIGVVVGKGG------RNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGAT 184
C +L +++ ++GK G R+ TR I+ AK P +CA D + ITG +
Sbjct: 142 CQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGES 201
Query: 185 LAVKKALVAVTTCLQHLSTME---------KSPICFNRPIEKVFYS-----NSSDP--HR 228
AVK+AL AV++ + E ++P P + Y +SDP
Sbjct: 202 EAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSIIIPSDVPVYPPGGLYPASDPIVTP 261
Query: 229 EFFPHL---SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKG--RKQEVALRMLFSGW 283
P + + VP L G S SSA P + G R +E+ +RML
Sbjct: 262 RAVPQIIGATNVPDLQGYADAGNSWPMYSSA-----LPVVSGVGASRSEELIIRMLCPSD 316
Query: 284 TASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
+IGK G+ ++S++ ASGA I E ++ I+ E S A +L+
Sbjct: 317 KIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLKSMAVEAVLLM 376
Query: 344 FARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVG 403
QG + E+ V++ +LV + +GC+ G S ++E+ T D+++
Sbjct: 377 ----------QGKINDEDD-TTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISK 425
Query: 404 GEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G++ CA ND ++++ G V++AL +++ RLR ++
Sbjct: 426 GDKP-KCADANDELVEVGGSVDCVRDALIQIILRLRDDV 463
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 19/102 (18%)
Query: 15 RGPLNLPDDV-VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+G +N DD VS RL+ P+ V+G +IG+SGSII+ IR+ TK + G
Sbjct: 377 QGKINDEDDTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKG---------- 426
Query: 74 VVGSGSIDRRIMFCENDVVVE-GGEVSSTQEAVIRVFERMWE 114
D+ ND +VE GG V ++A+I++ R+ +
Sbjct: 427 -------DKPKCADANDELVEVGGSVDCVRDALIQIILRLRD 461
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 32/210 (15%)
Query: 251 FHSS-SADADRDH-----PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
+HS D DR H D +G + + R+L +IGK G ++ S++ +
Sbjct: 8 YHSQRDHDGDRKHQKRRMTDRDDRGNDELIVYRILCPDEVIGSVIGKNGKVINSIRQETR 67
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHS--------------PVQNAAVLV---FARS 347
A + P S +RV+TI Y+ + Q+A + V A S
Sbjct: 68 AKVKVVDPFPGSKDRVITIYC--YVKEKEDVEIDDEFAGKEPLCAAQDALLKVHVAIANS 125
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV---GG 404
+ G S + + D ILV + + G + + ++ T +IK+
Sbjct: 126 IAAIGD----SEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAA 181
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
+ CA + D + I+GE + V+ AL V
Sbjct: 182 DPTHSCAMEFDNFVVITGESEAVKRALFAV 211
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 220/471 (46%), Gaps = 58/471 (12%)
Query: 3 HHSNPYGYS--SKRRGP--------LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRR 52
H + YG + SKRR P + + D V +R +CP +G +IGR G I +R
Sbjct: 13 HSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTV--YRYLCPVRKIGSIIGRGGDIAKQLRS 70
Query: 53 DTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFER 111
+TK I PG + RV+ + S E + + GE VS Q+A+ RV +R
Sbjct: 71 ETKSNIRIGETMPGCEERVVTIYSSSE--------ETNPFGDTGELVSPAQDALFRVHDR 122
Query: 112 MWEVEAEVEGDGDGDDVAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP-- 167
+ V E+ D + ++ +L + +IG V+GKGG+ + +R E+ A+I +L
Sbjct: 123 I--VAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 180
Query: 168 -PACAAIDDQLIQ------------ITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRP 214
P CA D+L+Q I G V+KAL + + L + + + + P
Sbjct: 181 LPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSP 240
Query: 215 IEKVFYSNSSDPHREFFPHLSLVPPLTGNP---SDNASEFHSSSADADRDHPGLDKKGRK 271
++ S + L V PL G+ + ++ S A RD +
Sbjct: 241 --NMYQSGGTFMTPNIDAPLVGVAPLMGSYGGYKGDTGDWSHSYYSARRD------ESSA 292
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
+E +LR++ G+IGK G I++ ++ SGA I + + + ++ ISA E+ +
Sbjct: 293 KEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFED 352
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
SP +AA+ + R E + E+ V +LV + +GCL G G + +SEM
Sbjct: 353 -PSPTIDAALRLQPRCSEK------AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEM 405
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
VT +I+++ E + A+++D ++QI+GE NAL +V RL+ NL
Sbjct: 406 RSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANL 456
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 211/458 (46%), Gaps = 61/458 (13%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV---VGSG 78
D++V +R++CP V+G +IG++G +I+SIR+ T ++ +PG+D RVILV V
Sbjct: 36 DELVVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHR 95
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+ R + ++D E V + Q A+++V + + E A + D D ++ +L +
Sbjct: 96 DLTHRDIDVDDDDDRE--PVCAAQNALLKVHDAIVEALA-INSDSDDEE---ANILVPAS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPP------ACAAIDDQLIQITGATLAVKKALV 192
+ V+GK G + R+R S + I + P +CA D +QITG AVKKAL
Sbjct: 150 QAASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDARAVKKALF 209
Query: 193 AVTTCLQHLSTMEKSP-------------ICFNRPIEKV--FYSNSSDPHREFFP----- 232
AV+ + + E P I P+ FYS S P
Sbjct: 210 AVSAIIYKSPSKEIIPLETSVQELPPSIIIPSELPVYPASNFYSLSDGAMPSGHPSLPIL 269
Query: 233 ----HLSLVPPLTGNPSDNASEF--HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTAS 286
H+S +P T P+D + S A P ++ LR++ G
Sbjct: 270 GAPHHVSRIPEFTV-PADAHGRLPIYQSMVPAI---PTYSTPKGSGDLLLRVVCPGDKIG 325
Query: 287 GIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR 346
+IGK G ++S++ SGA I E ++T+++ E D S A +L+ A+
Sbjct: 326 LVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATDDVKSAAVEAVLLLQAK 385
Query: 347 SVEVEGQQGFSSGENKG--DAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
N G D + + +LV + +GCL G G S V++M + + I + G
Sbjct: 386 I-------------NDGIEDRMHIRLLVPGNVIGCLIGKGGSIVNDMRNKSKAIIHISKG 432
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ A+ +D ++++ GE +++AL ++V RLR ++
Sbjct: 433 SKPRR-ASSSDELVEVFGEVDKLRDALVQIVLRLREDV 469
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 134/329 (40%), Gaps = 62/329 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R+VCP +G +IG+ G I SIR+++ I + + +I V + + D
Sbjct: 315 LRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATD----- 369
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-DDVAYCGLLANTTKIGVVVG 145
DV S+ EAV+ + ++ DG +D + LL IG ++G
Sbjct: 370 ---DV------KSAAVEAVLLLQAKI----------NDGIEDRMHIRLLVPGNVIGCLIG 410
Query: 146 KGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKALVAVTTCL----- 198
KGG V MR +S A I + P A+ D+L+++ G ++ ALV + L
Sbjct: 411 KGGSIVNDMRNKSKAIIHISKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVL 470
Query: 199 ------QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN--------- 243
Q+ K I P+ + SN S P P V PL+ +
Sbjct: 471 KDSVERQNSDKDGKRTIAITEPM---YSSNFSMP--ALLPSTRQVSPLSYDQRGEVERGL 525
Query: 244 ---PSDNASEFHSSSA--DADRDHPGLDKK---GRKQEVALRMLFSGWTASGIIGKRGAI 295
P ++ + S A D H K GR+ ++ + + SG S +IGKRG
Sbjct: 526 DVYPRSSSYRYSSLQAVDDGYGAHSSYTSKSYGGRRPDIEMIIPASGL--SKVIGKRGTN 583
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTIS 324
+ +++ SGA I + + V IS
Sbjct: 584 LDNIRKISGADIEIIESKSSRHDHVAHIS 612
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 35/210 (16%)
Query: 254 SSADADRDHPGLDKKGR----KQE-------VALRMLFSGWTASGIIGKRGAIVRSLQNA 302
+S D D G D+K R QE V R+L +IGK G ++ S++
Sbjct: 8 TSQHRDHDREGRDEKRRPAVHTQENSSNDELVVYRILCPDKVIGSVIGKNGKVINSIRQQ 67
Query: 303 SGALISFAAPLTKSGERVVTISA-LEYLDTRH-----------SPV---QNAAVLVFARS 347
+ A + P + +RV+ + + + D H PV QNA + V
Sbjct: 68 TNAKVKVVDPYPGADKRVILVYCHVHHRDLTHRDIDVDDDDDREPVCAAQNALLKVHDAI 127
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV---GG 404
VE S E +ILV A + G S + + ++ + IK+
Sbjct: 128 VEALAINSDSDDEE------ANILVPASQAASVIGKSGSVIKRLRSISKSSIKVRPKDPS 181
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
E CA D +QI+G+ + V+ AL V
Sbjct: 182 EVTHSCAMSFDNFVQITGDARAVKKALFAV 211
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 212/458 (46%), Gaps = 69/458 (15%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+R++C GG+IG+SGSII SIR+ T I+ PG + R+I + S RR
Sbjct: 68 SYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRR-- 121
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEA-------------EVEGDGDGDDVAYCG 132
D + S QEA+ + +R+ E +A + G G +
Sbjct: 122 ---RDPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATR 178
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
++ + +G ++GKGG+ + +MRIE+ +I +LP P C ++ ++++Q+ G AVK
Sbjct: 179 MVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVK 238
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP------HLSLVP---P 239
A+ +++ L+ ++S F+ I+ S P R FFP H++ P P
Sbjct: 239 NAIANISSRLRESQHRDRS--HFHGRIQ-------SSPER-FFPPDDDYSHMNNAPRRMP 288
Query: 240 LTGNP----------SDNASEFHSSSADADRDH---PGLDKKGR--KQEVALRMLFSGWT 284
+ GN ++ F S ++ + P D + +++ R+L
Sbjct: 289 IDGNSFGSRVSTGLVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDK 348
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVF 344
++G+ I+ LQN G + A + S E+++ I++ E D P Q A + +
Sbjct: 349 VECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQ 408
Query: 345 ARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
R V + +K + + +LV + +GC G S +SEM +TG +I++V
Sbjct: 409 TRIVNL--------LPDKENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIVPR 459
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
EQ+ + D +++I GE K ++AL EV RLR L
Sbjct: 460 EQLPAFISGTDELLEIVGEIKAARDALVEVTSRLRSYL 497
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 50/228 (21%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
L +D+V FR++CP V ++G S II ++ + + GS+ ++I++
Sbjct: 334 LGEDIV-FRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEG 392
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
D E+ QEA++ + R+ + D ++V LL +++
Sbjct: 393 PD--------------DELFPAQEALLHIQTRIVNLLP------DKENVITTRLLVPSSE 432
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTT 196
IG G+ +++ MR +GA I ++P PA + D+L++I G A + ALV VT+
Sbjct: 433 IGCFEGRDC-SLSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALVEVTS 491
Query: 197 CLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP 244
L+ S +REFFP + PP P
Sbjct: 492 RLR------------------------SYLYREFFPK-DMPPPSISAP 514
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 213/452 (47%), Gaps = 56/452 (12%)
Query: 13 KRRGPLNL-----PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
KRR P + PDD V +R +C + +G +IGR G I +R DT+ +I P
Sbjct: 24 KRRNPGDDTYAPGPDDTV-YRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPAC 82
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD- 126
D RVI + S I E+ +V Q+A+ RV E++ + V + +
Sbjct: 83 DERVITIFSSSRETNTIEDTED-------KVCPAQDALFRVHEKLATDDGPVNKENEESL 135
Query: 127 DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGA 183
LL + +IG ++GKGG + +R ++G++I +L P CA D+L+ ITG
Sbjct: 136 GQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGD 195
Query: 184 TLAVKKALVAVTTCL-------QHL-STMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS 235
+ V+KAL+ V++ L QHL ++ P P+ S+S+ P P +S
Sbjct: 196 PMVVRKALLQVSSRLHGNPSRSQHLLASSLNQPF----PVGSRLGSSSTAPVVGITPMVS 251
Query: 236 LVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRK----QEVALRMLFSGWTASGIIGK 291
+ D D P + + R+ +E +LR+L + G+IGK
Sbjct: 252 --------------PYGRYKGDMVGDWPSIYQPRREVSSPKEFSLRLLCAAANVGGVIGK 297
Query: 292 RGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVE-V 350
G I++ ++ SGA I + + + ++T+SA E+ + SP +A V + R E +
Sbjct: 298 GGGIIKQIRQESGAFIKVDSS-SAEDDCIITVSAKEFFEDPVSPTIDATVRLQPRCSEKI 356
Query: 351 EGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGC 410
+ + G S + +LV +GCL G G S ++E+ + +I+++ + V
Sbjct: 357 DAESGEPSYTTR-------LLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKV 409
Query: 411 AAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
A+ ++ ++ ISG+ ++AL ++ RL+ N
Sbjct: 410 ASDDEEMVLISGDLDFARHALLQITTRLKANF 441
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 252 HSSSADADRDHPGLDKKGR-KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+S + R +PG D + R L + IIG+ G I + L++ + A I
Sbjct: 17 YSENGGGKRRNPGDDTYAPGPDDTVYRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIG 76
Query: 311 APLTKSGERVVTI-------SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKG 363
+ ERV+TI + +E + + P Q+A V + +G + E+ G
Sbjct: 77 ESVPACDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEKLATDDGPVNKENEESLG 136
Query: 364 DAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
V V +LV +D +GC+ G G + + TG+ I+++ E + CA D ++ I+G+
Sbjct: 137 Q-VTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGD 195
Query: 424 YKNVQNALSEVVGRLRHN 441
V+ AL +V RL N
Sbjct: 196 PMVVRKALLQVSSRLHGN 213
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V+FRL+C +GG+IG+SG I+ ++ DT RI E SDHRVILV+ S++RRI
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ E E S+ QEAV+RVFER+ EV A V+G G V+ C LLA T+++G V+
Sbjct: 111 ALQGSS---EEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVS-CRLLAETSQVGSVI 166
Query: 145 GKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGA 183
GKGG+ V ++R ESG+KI +L P CAA D++++ +G+
Sbjct: 167 GKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGS 208
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR- 332
VA R+L G+IGK G IV+ LQ+ +GA I + S RV+ + A ++ R
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRI 110
Query: 333 ----------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
S Q A + VF R +EV G G V+ +L VG + G
Sbjct: 111 ALQGSSEEVEASAAQEAVLRVFERILEV---AAVVDGVPPGGVVSCRLLAETSQVGSVIG 167
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
G V ++ +G+ IK++ E++ CAA D +++ SG
Sbjct: 168 KGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSG 207
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 213/485 (43%), Gaps = 84/485 (17%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
++V +R++CP V+G +IG+ G +I+SIR+ T ++ +PG+D RVILV R
Sbjct: 36 ELVVYRILCPDKVIGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVK-HR 94
Query: 83 RIMFCENDVVVEGGE--VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
+M + + + V + Q A+++V + + A + D DD +L ++
Sbjct: 95 DVMLSDINADDDDDREPVCAAQNALLKVHDAIVGALAVTD---DSDD-KEANILVPASQA 150
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPP------ACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++R S + I + P +CA D +QITG AVKKAL AV
Sbjct: 151 ASVIGKSGSVIKKLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAV 210
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSS 254
+T M K P N P+E S D E P + L L P+ +S + S
Sbjct: 211 STI------MYKCPSKENIPLE-----TSID---ELPPTIILPSELPVYPA--SSLYSVS 254
Query: 255 SADADRDHPGLDKKGRKQ--------------------------------------EVAL 276
A HP L G E+ L
Sbjct: 255 DASMPSGHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQSMVPAVPTYNTPKCSGELLL 314
Query: 277 RMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPV 336
R++ G +IGK G +++++ SGA + E ++T+S+ E D S
Sbjct: 315 RVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSSTEATDDVKSAA 374
Query: 337 QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTG 396
A +L+ A+ + D + + +LV + +GCL G G S +++M + +
Sbjct: 375 VEAVLLLQAK-----------INDETEDRMHLRLLVPGNVIGCLIGKGGSIINDMRNKSK 423
Query: 397 TDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSP 456
I + G + A+ +D ++++ GE +++AL ++V RLR ++L ++ R
Sbjct: 424 AIIHISKGTKPRK-ASSSDELVEVFGEVDKLRDALVQIVLRLRE-----DVLKDSVGRQN 477
Query: 457 SGRVG 461
SG+ G
Sbjct: 478 SGKDG 482
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 82/219 (37%), Gaps = 37/219 (16%)
Query: 243 NPSDNASEFHSSSADADRDHP-----GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
NPS + H DRD + G + V R+L +IGK G ++
Sbjct: 2 NPSGKRTGQHRDHDREDRDQKRRPAHTQETSGMAELVVYRILCPDKVIGSVIGKGGKVIN 61
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPV-------------------QN 338
S++ + A + P + +RV+ L Y +H V QN
Sbjct: 62 SIRQQTNAKVKVVDPYPGADKRVI----LVYCYVKHRDVMLSDINADDDDDREPVCAAQN 117
Query: 339 AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTD 398
A + V V G + + D +ILV A + G S + ++ V+ +
Sbjct: 118 ALLKVHDAIV------GALAVTDDSDDKEANILVPASQAASVIGKSGSVIKKLRSVSKSF 171
Query: 399 IKLVGGEQ---VLGCAAQNDVVIQISGEYKNVQNALSEV 434
IK+ + CA D +QI+G+ + V+ AL V
Sbjct: 172 IKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAV 210
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
+D + RL+ P V+G LIG+ GSII+ +R +K IH G
Sbjct: 390 EDRMHLRLLVPGNVIGCLIGKGGSIINDMRNKSKAIIHISKG----------------TK 433
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE 114
R +++V GEV ++A++++ R+ E
Sbjct: 434 PRKASSSDELVEVFGEVDKLRDALVQIVLRLRE 466
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 131/274 (47%), Gaps = 28/274 (10%)
Query: 180 ITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP 239
ITG AV+KAL+ V++CLQ + + +P + + N + FP
Sbjct: 333 ITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGSS 392
Query: 240 LTGNPSDNASEFHSSSADADRDHPGLDKKGR------KQEVALRMLFSGWTASGIIGKRG 293
L G ++HS + PG + G ++EV ++L +IGK G
Sbjct: 393 LHG------PDYHSRGYSS---MPGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGG 443
Query: 294 AIVRSLQNASGALISFAAPLTKSGERVVTISALEYL-----DTRHSPVQNAAVLVFARSV 348
+I+R LQ+ +GA I A S ERVV ISA E + +HSP Q+A + V R
Sbjct: 444 SIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLTNXEQKHSPAQDAVIRVHCRIA 503
Query: 349 EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVL 408
E+ G G AV +LV + +GCL G G +SEM TG I++ EQV
Sbjct: 504 EI--------GFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVP 555
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
C +QND ++Q+ G ++VQ+AL + R+R +
Sbjct: 556 KCGSQNDELVQVIGSLQSVQDALFCITSRIRETI 589
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 97/181 (53%), Gaps = 26/181 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR- 83
V FR++CP GG+IG+ G+II R DT +I + G D RVIL+V +R
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 84 -IMFC-----------------ENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG 125
C N V V+ E S Q+A++RVFER+ +V+ E E
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 126 DDVAY----CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLI 178
+D+ C LLA + ++G V+G+GG+ V ++R ESGA+I +LP PACA+ D+LI
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 179 Q 179
Q
Sbjct: 236 Q 236
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 122/263 (46%), Gaps = 40/263 (15%)
Query: 3 HHSNPYGYSSKRRGPLNLP-------DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTK 55
+HS GYSS GP N+ ++ V F+L+C VG LIG+ GSII ++ +T
Sbjct: 398 YHSR--GYSSMP-GPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETG 454
Query: 56 CRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV 115
I P SD RV+++ R N + S Q+AVIRV R+ E+
Sbjct: 455 ASIKIADAAPDSDERVVVISA-----REACTLTN----XEQKHSPAQDAVIRVHCRIAEI 505
Query: 116 EAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAA 172
E LL ++ +IG ++GKGG ++ MR +GA I + P C +
Sbjct: 506 GFEPGA------AVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGS 559
Query: 173 IDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
+D+L+Q+ G+ +V+ AL +T+ ++ F P++ + + P+ FP
Sbjct: 560 QNDELVQVIGSLQSVQDALFCITSRIRE--------TIF--PLKPSISNVNGPPYMSSFP 609
Query: 233 HLSLVPPLTGNPSDNASEFHSSS 255
+ PP+ D AS H SS
Sbjct: 610 EIP--PPMFRPRHDPASPGHYSS 630
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA----- 325
K +V R+L G+IGK GAI+R + +GA I + ERV+ I A
Sbjct: 53 KPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKS 112
Query: 326 ----------------------------LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
+ D SP Q A V VF R ++V+ ++
Sbjct: 113 KREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEK 172
Query: 358 SGENKGDAVAVS--ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
+ VAV +L ++ VGC+ G G V ++ +G I+++ + + CA+ D
Sbjct: 173 EKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGD 232
Query: 416 VVIQ 419
+IQ
Sbjct: 233 ELIQ 236
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 130/268 (48%), Gaps = 40/268 (14%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
PL +P +FRL+CP VG +IG+SG++I +++ T +I E GS RVI ++
Sbjct: 37 PLVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIA 96
Query: 77 SGSIDRRIMFCEND-------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
R+ N+ E EVS Q A+I+VFE + EA+ D
Sbjct: 97 QADSKSRVKLGVNNNGNAEGEKKEEEVEVSKAQGALIKVFE-LLAAEAD-------SDTV 148
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAV 187
C LL ++ G V+GKGG+ V +R E+G KI + P CA DD++++I G +AV
Sbjct: 149 VCRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRTENLPICADTDDEMVEIEGNAIAV 208
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP--------------------- 226
KKALV+++ CLQ+ +++K + NRP+EK F ++ P
Sbjct: 209 KKALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRPIETIIQESLPRSIEVNPYDYR 268
Query: 227 --HREFFPHLSLVPPLTGNPSDNASEFH 252
E FP +L P NP D H
Sbjct: 269 LRKDEIFPRGTLARPSDVNPHDTLHHRH 296
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 100/178 (56%), Gaps = 2/178 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q+V ++L S A G+IG G +VR L + +GA I+ L ER++ ++A E +
Sbjct: 458 QDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPENPEC 517
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
+ SP Q A +L+F+R E+ ++ +G ++ ++V +GC+ G G VSEM
Sbjct: 518 QSSPAQKAIMLLFSRLFELSTKKILDNGPRT--SITARLVVPTSQIGCVLGKGGVIVSEM 575
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TG I+++ EQ C ++ND VIQI+GE+ NV+ A+ + RLR ++ S + N
Sbjct: 576 RKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVFSNSMKN 633
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 29/244 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DVV F+++C T GG+IG G ++ + +T I+ + R+I V + +
Sbjct: 459 DVV-FKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPENPE- 516
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
C++ S Q+A++ +F R++E+ + D L+ T++IG
Sbjct: 517 ----CQS---------SPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGC 563
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
V+GKGG V+ MR +GA I +L P C + +DQ+IQITG V++A+ +T+ L+
Sbjct: 564 VLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLR 623
Query: 200 H--LSTMEKSPICFNRP---IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSS 254
S K+ I + E++++ S +P H S+ NP N+S H
Sbjct: 624 DSVFSNSMKNSITKSSSALTTERIYHRQSDNP-LSIGSHQSV-----SNPPTNSSSLHRR 677
Query: 255 SADA 258
S D+
Sbjct: 678 SEDS 681
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 69/181 (38%), Gaps = 32/181 (17%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR-- 332
A R+L +IGK G +++ LQ ++GA I P S +RV+TI A +R
Sbjct: 46 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVK 105
Query: 333 -------------------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
S Q A + VF + E D V +L
Sbjct: 106 LGVNNNGNAEGEKKEEEVEVSKAQGALIKVFE----------LLAAEADSDTVVCRLLTE 155
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
+ G + G G V + TG I + E + CA +D +++I G V+ AL
Sbjct: 156 SSHAGAVIGKGGQMVGSIRKETGCKIS-IRTENLPICADTDDEMVEIEGNAIAVKKALVS 214
Query: 434 V 434
+
Sbjct: 215 I 215
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L +P +FRL+CP VG +IG+SG++I +++ T +I E GS RVI ++
Sbjct: 40 LVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ 99
Query: 78 GSIDRRIMFCEND-------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
R+ N+ E EVS Q A+I+VFE + EA+ D
Sbjct: 100 ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE-LLAAEAD-------SDTVV 151
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVK 188
C LL ++ G V+GKGG+ V +R E+G KI + P CA DD+++++ G +AVK
Sbjct: 152 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVK 211
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
KALV+++ CLQ+ +++K + NRP+EK F ++ P
Sbjct: 212 KALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q+V ++L S A G+IG G +VR L + +GA I+ L ER++ ++A E +
Sbjct: 462 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPEC 521
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
+ SP Q A +L+F+R E+ + +G ++ ++V +GC+ G G VSEM
Sbjct: 522 QSSPAQKAIMLIFSRLFELATNKILDNGPRS--SITARLVVPTSQIGCVLGKGGVIVSEM 579
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TG I+++ EQ C ++ND V+QI+ E+ NV+ A+ + RLR ++ S + N
Sbjct: 580 RKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSMKN 637
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 27/243 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DVV F+++C T GG+IG G ++ + +T I+ + R+I V S + +
Sbjct: 463 DVV-FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPE- 520
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
C++ S Q+A++ +F R++E+ D L+ T++IG
Sbjct: 521 ----CQS---------SPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGC 567
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
V+GKGG V+ MR +GA I +L P C + +DQ++QIT V++A+ +T+ L+
Sbjct: 568 VLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLR 627
Query: 200 H--LSTMEKSPICFNRP--IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
S K+ + + + FY SD H S+ NP+ N+S H S
Sbjct: 628 DSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSV-----SNPATNSSSLHRRS 682
Query: 256 ADA 258
D+
Sbjct: 683 EDS 685
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR-- 332
A R+L +IGK G +++ LQ ++GA I P + S +RV+TI A +R
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 333 -------------------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
S Q A + VF + E D V +L
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----------LLAAEADSDTVVCRLLTE 157
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
+ G + G G V + TG I + E + CA +D ++++ G V+ AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKIS-IRIENLPICADTDDEMVEVEGNAIAVKKAL 214
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L +P +FRL+CP VG +IG+SG++I +++ T +I E GS RVI ++
Sbjct: 40 LVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ 99
Query: 78 GSIDRRIMFCEND-------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
R+ N+ E EVS Q A+I+VFE + EA+ D
Sbjct: 100 ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE-LLAAEAD-------SDTVV 151
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVK 188
C LL ++ G V+GKGG+ V +R E+G KI + P CA DD+++++ G +AVK
Sbjct: 152 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVK 211
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
KALV+++ CLQ+ +++K + NRP+EK F ++ P
Sbjct: 212 KALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q+V ++L S A G+IG G +VR L + +GA I+ L ER++ ++A E +
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
+ SP Q A +L+F+R E+ + +G ++ ++V +GC+ G G VSEM
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRS--SITARLVVPTSQIGCVLGKGGVIVSEM 567
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TG I+++ EQ C ++ND V+QI+GE+ NV+ A+ + RLR ++ S + N
Sbjct: 568 RKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKN 625
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 27/243 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DVV F+++C T GG+IG G ++ + +T I+ + R+I V S + +
Sbjct: 451 DVV-FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE- 508
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
C++ S Q+A++ +F R++E+ D L+ T++IG
Sbjct: 509 ----CQS---------SPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGC 555
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
V+GKGG V+ MR +GA I +L P C + +DQ++QITG V++A+ +T+ L+
Sbjct: 556 VLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLR 615
Query: 200 H--LSTMEKSPICFNRP--IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
S K+ + + + FY SD H S+ NP+ N+S H S
Sbjct: 616 DSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSV-----SNPATNSSSLHRRS 670
Query: 256 ADA 258
D+
Sbjct: 671 EDS 673
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR-- 332
A R+L +IGK G +++ LQ ++GA I P + S +RV+TI A +R
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 333 -------------------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
S Q A + VF + E D V +L
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----------LLAAEADSDTVVCRLLTE 157
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
+ G + G G V + TG I + E + CA +D ++++ G V+ AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKIS-IRIENLPICADTDDEMVEVEGNAIAVKKAL 214
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L +P +FRL+CP VG +IG+SG++I +++ T +I E GS RVI ++
Sbjct: 40 LVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ 99
Query: 78 GSIDRRIMFCEND-------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
R+ N+ E EVS Q A+I+VFE + EA+ D
Sbjct: 100 ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE-LLAAEAD-------SDTVV 151
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVK 188
C LL ++ G V+GKGG+ V +R E+G KI + P CA DD+++++ G +AVK
Sbjct: 152 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVK 211
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
KALV+++ CLQ+ +++K + NRP+EK F ++ P
Sbjct: 212 KALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 2/178 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q+V ++L S A G+IG G +VR L + +GA I+ L ER++ ++A E +
Sbjct: 462 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPEC 521
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
+ SP Q A +L+F+R E+ + +G ++ ++V +GC+ G G VSEM
Sbjct: 522 QSSPAQKAIMLIFSRLFELATNKILDNGPRS--SITARLVVPTSQIGCVLGKGGVIVSEM 579
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TG I+++ EQ C ++ND V+QI+ E+ NV+ A+ + RLR ++ S + N
Sbjct: 580 RKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVFSNSMKN 637
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 27/243 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DVV F+++C T GG+IG G ++ + +T I+ + R+I V S + +
Sbjct: 463 DVV-FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPE- 520
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
C++ S Q+A++ +F R++E+ D L+ T++IG
Sbjct: 521 ----CQS---------SPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGC 567
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
V+GKGG V+ MR +GA I +L P C + +DQ++QIT V++A+ +T+ L+
Sbjct: 568 VLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLR 627
Query: 200 H--LSTMEKSPICFNRP--IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
S K+ + + + FY SD H S+ NP+ N+S H S
Sbjct: 628 DSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSV-----SNPATNSSSLHRRS 682
Query: 256 ADA 258
D+
Sbjct: 683 EDS 685
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR-- 332
A R+L +IGK G +++ LQ ++GA I P + S +RV+TI A +R
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 333 -------------------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
S Q A + VF + E D V +L
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----------LLAAEADSDTVVCRLLTE 157
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
+ G + G G V + TG I + E + CA +D ++++ G V+ AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKIS-IRIENLPICADTDDEMVEVEGNAIAVKKAL 214
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L +P +FRL+CP VG +IG+SG++I +++ T +I E GS RVI ++
Sbjct: 40 LVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ 99
Query: 78 GSIDRRIMFCEND-------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
R+ N+ E EVS Q A+I+VFE + EA+ D
Sbjct: 100 ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE-LLAAEAD-------SDTVV 151
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVK 188
C LL ++ G V+GKGG+ V +R E+G KI + P CA DD+++++ G +AVK
Sbjct: 152 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVK 211
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
KALV+++ CLQ+ +++K + NRP+EK F ++ P
Sbjct: 212 KALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q+V ++L S A G+IG G +VR L + +GA I+ L ER++ ++A E +
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
+ SP Q A +L+F+R E+ + +G ++ ++V +GC+ G G VSEM
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRS--SITARLVVPTSQIGCVLGKGGVIVSEM 567
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TG I+++ EQ C ++ND V+QI+GE+ NV+ A+ + RLR ++ S + N
Sbjct: 568 RKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKN 625
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 27/243 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DVV F+++C T GG+IG G ++ + +T I+ + R+I V S + +
Sbjct: 451 DVV-FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE- 508
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
C++ S Q+A++ +F R++E+ D L+ T++IG
Sbjct: 509 ----CQS---------SPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGC 555
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
V+GKGG V+ MR +GA I +L P C + +DQ++QITG V++A+ +T+ L+
Sbjct: 556 VLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLR 615
Query: 200 H--LSTMEKSPICFNRP--IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
S K+ + + + FY SD H S+ NP+ N+S H S
Sbjct: 616 DSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSV-----SNPATNSSSLHRRS 670
Query: 256 ADA 258
D+
Sbjct: 671 EDS 673
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR-- 332
A R+L +IGK G +++ LQ ++GA I P + S +RV+TI A +R
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 333 -------------------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
S Q A + VF + E D V +L
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----------LLAAEADSDTVVCRLLTE 157
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
+ G + G G V + TG I + E + CA +D ++++ G V+ AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKIS-IRIENLPICADTDDEMVEVEGNAIAVKKAL 214
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L +P +FRL+CP VG +IG+SG++I +++ T +I E GS RVI ++
Sbjct: 40 LVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ 99
Query: 78 GSIDRRIMFCEND-------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
R+ N+ E EVS Q A+I+VFE + EA+ D
Sbjct: 100 ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE-LLAAEAD-------SDTVV 151
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVK 188
C LL ++ G V+GKGG+ V +R E+G KI + P CA DD+++++ G +AVK
Sbjct: 152 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVK 211
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
KALV+++ CLQ+ +++K + NRP+EK F ++ P
Sbjct: 212 KALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q+V ++L S A G+IG G +VR L + +GA I+ L ER++ ++A E +
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
+ SP Q A +L+F+R E+ + +G ++ ++V +GC+ G G VSEM
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRS--SITARLVVPTSQIGCVLGKGGVIVSEM 567
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TG I+++ EQ C ++ND V+QI+GE+ NV+ A+ + RLR ++ S + N
Sbjct: 568 RKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKN 625
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 27/243 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DVV F+++C T GG+IG G ++ + +T I+ + R+I V S + +
Sbjct: 451 DVV-FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE- 508
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
C++ S Q+A++ +F R++E+ D L+ T++IG
Sbjct: 509 ----CQS---------SPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGC 555
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
V+GKGG V+ MR +GA I +L P C + +DQ++QITG V++A+ +T+ L+
Sbjct: 556 VLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLR 615
Query: 200 H--LSTMEKSPICFNRP--IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
S K+ + + + FY SD H S+ NP+ N+S H S
Sbjct: 616 DSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSV-----SNPATNSSSLHRRS 670
Query: 256 ADA 258
D+
Sbjct: 671 EDS 673
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR-- 332
A R+L +IGK G +++ LQ ++GA I P + S +RV+TI A +R
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 333 -------------------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
S Q A + VF + E D V +L
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----------LLAAEADSDTVVCRLLTE 157
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
+ G + G G V + TG I + E + CA +D ++++ G V+ AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKIS-IRIENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 434 V 434
+
Sbjct: 217 I 217
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 119/218 (54%), Gaps = 17/218 (7%)
Query: 18 LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
L +P +FRL+CP VG +IG+SG++I +++ T +I E GS RVI ++
Sbjct: 40 LVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQ 99
Query: 78 GSIDRRIMFCEND-------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
R+ N+ E EVS Q A+I+VFE + EA+ D
Sbjct: 100 ADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE-LLAAEAD-------SDTVV 151
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVK 188
C LL ++ G V+GKGG+ V +R E+G KI + P CA DD+++++ G +AVK
Sbjct: 152 CRLLTESSHAGAVIGKGGQMVGSIRKETGCKISIRIENLPICADTDDEMVEVEGNAIAVK 211
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
KALV+++ CLQ+ +++K + NRP+EK F ++ P
Sbjct: 212 KALVSISRCLQNCQSIDKVRMVGNRPLEKEFQASLHRP 249
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q+V ++L S A G+IG G +VR L + +GA I+ L ER++ ++A E +
Sbjct: 450 QDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPEC 509
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
+ SP Q A +L+F+R E+ + +G ++ ++V +GC+ G G VSEM
Sbjct: 510 QSSPAQKAIMLIFSRLFELATNKILDNGPRS--SITARLVVPTSQIGCVLGKGGVIVSEM 567
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TG I+++ EQ C ++ND V+QI+GE+ NV+ A+ + RLR ++ S + N
Sbjct: 568 RKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKN 625
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 27/243 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DVV F+++C T GG+IG G ++ + +T I+ + R+I V S + +
Sbjct: 451 DVV-FKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPE- 508
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
C++ S Q+A++ +F R++E+ D L+ T++IG
Sbjct: 509 ----CQS---------SPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGC 555
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
V+GKGG V+ MR +GA I +L P C + +DQ++QITG V++A+ +T+ L+
Sbjct: 556 VLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLR 615
Query: 200 H--LSTMEKSPICFNRP--IEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
S K+ + + + FY SD H S+ NP+ N+S H S
Sbjct: 616 DSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSV-----SNPATNSSSLHRRS 670
Query: 256 ADA 258
D+
Sbjct: 671 EDS 673
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR-- 332
A R+L +IGK G +++ LQ ++GA I P + S +RV+TI A +R
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 333 -------------------HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
S Q A + VF + E D V +L
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----------LLAAEADSDTVVCRLLTE 157
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
+ G + G G V + TG I + E + CA +D ++++ G V+ AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKIS-IRIENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 434 V 434
+
Sbjct: 217 I 217
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 49/442 (11%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S+RL+C GG+IG+SGSII SIR+ T I+ G + R+I + S RR
Sbjct: 64 SYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEI----SDTRR-- 117
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY-------CGLLANTT 138
D + S QEA++ + ER+ E + E + D L+ +
Sbjct: 118 ---RDPDGRMPQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKM 174
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALVAV 194
+G ++GKGG+ + +MRIE+ +I +LP P C ++ ++++Q+TG VK A + +
Sbjct: 175 HVGSLLGKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVI 234
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSD----PHREFFPHL---SLVPPL------- 240
++ L+ ++S + +S + P ++ PH+ S P +
Sbjct: 235 SSRLRESQHRDRSGERGGGGGQFHGRGHSPERFFPPDDDYLPHVSSGSRRPSVERSGFGS 294
Query: 241 ---TGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
T N +N S S D D++ +++ R+L I+G+ G I+
Sbjct: 295 RIATTNSRNNNHASISYSMDQGAAPVAHDEQPFYEDLIFRILCPVDRVDRIVGESGGILE 354
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
LQ+ G + + + S E++V I++ E + P Q A + + V++
Sbjct: 355 LLQDRVGVDVQISDRVGGSDEQMVIITSEEGPNDTMFPAQEALLHIQTHIVDL------- 407
Query: 358 SGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVV 417
+ ++V + + CL G +S +SE+E TG ++++ E++ C A D +
Sbjct: 408 ----SDSIITTRLIVPSSDIECLDGKNAS-LSEIERSTGASVQILPREELPPCIANTDEL 462
Query: 418 IQISGEYKNVQNALSEVVGRLR 439
+QI GE + +N + +V +LR
Sbjct: 463 VQIVGEIEAARNVILDVTAKLR 484
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT--- 331
+ R+L A G+IGK G+I++S++ +GA I+ P+ ER++ IS D
Sbjct: 64 SYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGR 123
Query: 332 --RHSPVQNAAVLVFARSVEVEGQQGFSSGEN-------KGDAVAVSILVGADFVGCLTG 382
+ SP Q A +L+ R +E GF E+ G V+ ++V VG L G
Sbjct: 124 MPQFSPAQEALLLIHERLLE--NDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLLG 181
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVL-GCAAQNDVVIQISGEYKNVQNALSEVVGRLR-- 439
G + +M T T I+++ + L C + ++ ++Q++G+ NV+NA + RLR
Sbjct: 182 KGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRES 241
Query: 440 -HNLKSGE 446
H +SGE
Sbjct: 242 QHRDRSGE 249
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 205/433 (47%), Gaps = 51/433 (11%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP +G +IG+ G I +R D+K I PG D RV+ + S
Sbjct: 12 YRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSSSE------- 64
Query: 87 CENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG--------LLANT 137
E ++ + GE V Q+A+ V +R+ + + ++ G +L T
Sbjct: 65 -ETNLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRMLVPT 123
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVM-----LPPPACAAIDDQLIQITGATLAVKKALV 192
+IG V+GKGG+ + +R E+ A+I + LPP A + D+L+ I G V+KAL
Sbjct: 124 DQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALST--DELLLIHGEPSVVRKALY 181
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE--FFPHLSLVPPLTGNPSDNASE 250
V T L + + + S+S++ ++ F + PL G +
Sbjct: 182 QVATRLHENPSRS----------QHLLLSSSANTYQSGGMFVTANAGAPLLGLYGNYKGS 231
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS RD + ++ +LR++ G+IGK G I++ ++ S A I
Sbjct: 232 WSSSFYPDQRD------EASAKDFSLRLVCPIANIGGVIGKGGGIIKQIRQESRASIKVD 285
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS- 369
+ + + ++ ISA E+ + SP NAA+ + R E + + GD+V +
Sbjct: 286 SSGAEGNDCIIFISAKEFFED-QSPTMNAALRMQPRCSE-------KTEKESGDSVITTR 337
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
+LVG +GCL G G + +SEM ++T +I+++ + + A ++D ++QI+G + N
Sbjct: 338 LLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASN 397
Query: 430 ALSEVVGRLRHNL 442
AL +V+ RL+ N+
Sbjct: 398 ALLQVILRLKANI 410
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 24/178 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE-GGFPGSDHRVILVVGSGSIDRRI 84
S RLVCP +GG+IG+ G II IR++++ I + G G+D I+ + +
Sbjct: 250 SLRLVCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGND--CIIFISAKE----- 302
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
F E+ S T A +R+ R E + E E GD V LL ++IG ++
Sbjct: 303 -FFEDQ--------SPTMNAALRMQPRCSE-KTEKES---GDSVITTRLLVGRSQIGCLM 349
Query: 145 GKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
GKGG ++ MR + A I ++ P A DD+++QITG+ AL+ V L+
Sbjct: 350 GKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILRLK 407
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 113/188 (60%), Gaps = 10/188 (5%)
Query: 6 NPYGYSSKRRG--------PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
NP+ S +R PL +P V+FRL+C + +GG+IG+SG++I +++ T +
Sbjct: 21 NPFPNGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAK 80
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I E S RVI+V+G+ +ID ++M + E EVS QEA++RVF+R+ EV A
Sbjct: 81 IRIEDSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAA 140
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDD 175
E+EG GD C L+A++ + G V+GKGG+ V +++ ++G KI + PAC + D
Sbjct: 141 EMEGIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPD 200
Query: 176 QLIQITGA 183
++I+ + +
Sbjct: 201 EVIECSAS 208
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR- 332
VA R+L + G+IGK G ++++LQ +GA I +S +RV+ + +D +
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 333 ----H---------SPVQNAAVLVFARSVEVEGQ-QGFSSGENKGDAVAVSILVGADFVG 378
H S Q A + VF R +EV + +G G+ V+ ++ + G
Sbjct: 108 MVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDR---TVSCRLVADSAQAG 164
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVV 435
+ G G V +++ TG I V + + C + D VI+ S +A++ +V
Sbjct: 165 SVIGKGGKVVEKIKKDTGCKI-WVCKDNLPACISSPDEVIECSASRSMFGSAVTRIV 220
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 8/162 (4%)
Query: 278 MLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQ 337
M+ IIGK G+ +R+LQ+ +GA I + S ERVV ISA E D HSP Q
Sbjct: 1 MIILNEMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQ 60
Query: 338 NAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGT 397
+A V V++R E + ++ +LV + +GCL G G S ++EM +TG
Sbjct: 61 DAVVRVYSRISE--------ASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGA 112
Query: 398 DIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
I++ G EQ+ CA +ND ++Q++G ++++Q+AL + GR+R
Sbjct: 113 SIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIR 154
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 146/376 (38%), Gaps = 58/376 (15%)
Query: 35 VVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+VG +IG+ GS I +++ +T I SD RV+ + EN ++
Sbjct: 7 MVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISAR----------ENSDMMH 56
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
S Q+AV+RV+ R+ E D LL + IG ++GKGG +T M
Sbjct: 57 ----SPAQDAVVRVYSRISEASM------DRSSPTPARLLVPSQHIGCLLGKGGSIITEM 106
Query: 155 RIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICF 211
R +GA I + P CA +D+++Q+TG+ +++ AL+ +T ++ + + P
Sbjct: 107 RKITGASIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGG 166
Query: 212 NRPIEKV----FYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDK 267
P V + + +P PHL P G P HS DA H +
Sbjct: 167 MPPYPPVGNIPVHQSRQEPPP---PHLH---PSGGMP---PYPMHSFRPDAPMGH--FET 215
Query: 268 KGRKQEVALRMLFSGW--TASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
+ M + G G++G L+ S AP T S A
Sbjct: 216 GDHRPPPVHSMEYMGADRMPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDA 275
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ D R PV + + S E +++ ++G + G+
Sbjct: 276 VLATDLRKGPVASENQVATPTSTTTE------------------VVIPCKYIGFVCGNSG 317
Query: 386 SAVSEMEDVTGTDIKL 401
S + E+ ++G I +
Sbjct: 318 SEIEEIRQMSGASITV 333
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 203/411 (49%), Gaps = 52/411 (12%)
Query: 50 IRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVF 109
+R DT+ +I G D RVI + S ++ E+ +V Q+A+ RV
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAED-------KVCPAQDALFRVH 53
Query: 110 ERMWEVEAEVEGDGDGDDVAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP 167
E++ ++ ++ + + +A LL + +IG ++GKGG + +R ++GA I +L
Sbjct: 54 EKL-SIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSN 112
Query: 168 ---PACAAIDDQLIQITGATLAVKKALVAVTTCL-------QHL--STMEKSPICFNRPI 215
PACA D+L+QI+G + V+KAL+ V++ L QHL S+M + P+
Sbjct: 113 ENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQP-----YPV 167
Query: 216 EKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQ--- 272
S+S+ P + + PL S + D D P + + R++
Sbjct: 168 GSHLGSSSTAP-------VVGITPLI-------SSYGGYKGDVAGDWPSIYQPRREESSA 213
Query: 273 -EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
E +LR+L + G+IGK G I++ ++ SGA I + T+ + ++T+SA E+ +
Sbjct: 214 KEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTED-DCIITVSAKEFFED 272
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
SP NAAV + R E + E+ + +LV +GCL G G S ++E+
Sbjct: 273 PVSPTINAAVHLQPRCSEK------TDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEI 326
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ +I+++ E V AA+++ ++QISG+ V++AL ++ RL+ N
Sbjct: 327 RRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKANF 377
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 24/178 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S RL+C VGG+IG+ G II IR+++ G F I V S + D I+
Sbjct: 217 SLRLLCAASNVGGVIGKGGGIIKQIRQES-------GAF-------IKVDSSNTEDDCII 262
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-LLANTTKIGVVV 144
E VS T A + + R E + D + +Y LL +T++IG ++
Sbjct: 263 TVSAKEFFE-DPVSPTINAAVHLQPRCSE-----KTDPESAIPSYTTRLLVSTSRIGCLI 316
Query: 145 GKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
GKGG +T +R S A I +L P AA D++++QI+G V+ AL+ +TT L+
Sbjct: 317 GKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLK 374
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 211/464 (45%), Gaps = 65/464 (14%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS-GSI 80
+ V+FR++C G +IG+ G ++ + + T+ I E S +R+I + G GS+
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 81 DR-RIMFCENDV-------VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG 132
R ++ N+V + EVS Q A+IRVF EA GD V+ C
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVF------EALNFGDCTSSTVS-CN 140
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATL-AVKK 189
LL + + V+GK G + R+ E+G + + C D +++I G L AV K
Sbjct: 141 LLMEGSHVVTVIGKNGELMQRILEETGCNVQLRSHDLSICTNPGDVVLKIEGNRLSAVMK 200
Query: 190 ALVAVTTCLQH---LST----MEKSPICFNRPIE-KVFYSNSSDPH-------------- 227
ALV++++ LQ +ST E P RP+E + DPH
Sbjct: 201 ALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDPHGSLHRHVEISQEDA 260
Query: 228 --REFF-----PHLSLVPPLTGNPSDNASEFHSSSAD--ADRDHPGLDKKGRKQEVALRM 278
R FF P + +P +PS + S+S + P K ++V L++
Sbjct: 261 LVRPFFRTITQPRIDYLP----HPSYDHRLITSASKNPPVTIKQPLQASKDDIRQVDLKI 316
Query: 279 LFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQN 338
L S +AS +I RS+ +AS IS ER+VTI+A E S Q
Sbjct: 317 LCSNESASVVIK-----TRSVTDAS---ISVGDRHPDCDERLVTITAFEKTKDITSESQR 368
Query: 339 AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTD 398
A VLVF+ E + SG ++ ++V ++ + CL G + ++ TG
Sbjct: 369 ALVLVFSNMYENATAKVLDSGLT--SSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAF 426
Query: 399 IKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
I ++ EQ C ++N+ V+QISGE+ NV+ A+++V LR +L
Sbjct: 427 ITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDL 470
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 215/473 (45%), Gaps = 69/473 (14%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVS-------FRLVCPTPVVGGLIGRSGSIISSIRRDTK 55
H + YG KRR P + P D + +R +CP +G +IG+ G I +R D+K
Sbjct: 14 HSQSDYG-GGKRRNPGDDPSDQNTITNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSK 72
Query: 56 CRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFERMWE 114
I PG D R++ + S E ++ E GE V Q+A+ V +R+
Sbjct: 73 SNIRISEAMPGYDERIVTIYSSSE--------ETNLFGETGEYVCPAQDALFMVHDRVIA 124
Query: 115 VE---------AEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVM- 164
+ + G+ V +L +IG V+GKGG+ + +R E+ A+I +
Sbjct: 125 EDLNNAAAEEEEGEDNFGEVQQVT-VRMLVPADQIGCVIGKGGQVIQNIRSETCAQIRIT 183
Query: 165 ----LPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFY 220
LPP A + D+L+ I G AV+KAL V T L + + +
Sbjct: 184 KDDHLPPLALSI--DELLLIHGEPSAVRKALYQVATRLHENPSRS----------QHLIL 231
Query: 221 SNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLF 280
S+S++ H F + P+ G + + SS RD + +E +LR++
Sbjct: 232 SSSANVHGGVFVTANAGAPVLGLYGNYKGGWSSSFYPDQRD------ESSTKEFSLRLVC 285
Query: 281 SGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAA 340
G+IGK G I++ ++ S A I + + + ++ ISA E+ + + SP NAA
Sbjct: 286 PTANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISAKEFFEDQ-SPTMNAA 344
Query: 341 VLVFAR-SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
+ + R S + E + G S + +LVG +GCL G G + +SEM + T +I
Sbjct: 345 LRLQPRCSDKTEKESGDS-------VITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANI 397
Query: 400 KLVGGEQVLGCAAQNDVV----------IQISGEYKNVQNALSEVVGRLRHNL 442
+++ + + A ++D + +QI+G + NAL +V+ RL+ NL
Sbjct: 398 RIISEDNLPKVAVEDDEMVQVNVYNFNSVQITGSLEVASNALLQVILRLKANL 450
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 196/443 (44%), Gaps = 58/443 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID-- 81
SFR++CP G S I++ + D+ I FPG RVI G++
Sbjct: 108 TTSFRILCPESKAYGF---PASFINNAQDDSGAIITIHPPFPGDPVRVI-ETADGTLREA 163
Query: 82 --RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD------DVAYCG- 132
R MF S QEA++ V R+ E + + +GD DG+ D G
Sbjct: 164 DGRPPMF------------SPAQEALLMVHRRILETQPD-DGDEDGEYGPRGKDARDRGK 210
Query: 133 ----LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGAT 184
L+ +G ++GKGG+ + +MR E+ I +LP P C ++ ++++Q+ G
Sbjct: 211 VTTRLIVPRQHVGCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEG 270
Query: 185 LAVKKALVAVTTCLQHLSTMEKSPICF--NRPIEKVFYSNSSDPHREFFPHLSLVPPLTG 242
VKKA+ ++ L+ ++ P N P ++ ++ + P P
Sbjct: 271 NNVKKAVAIISDRLKESLHRDRGPFLRGRNSPEHRISQADEYLGGGQQMPAFEEPYPRFD 330
Query: 243 NPSDNAS------EFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIV 296
+N S EF S+ + + +HP + E+ R+L A ++G R I+
Sbjct: 331 QIRNNGSMEPPGYEFDSNGSKFN-EHPEIPYD----EIIFRILCPNDKAISLVGSRDGII 385
Query: 297 RSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
LQ G + + S ER + I++ E D P Q A + + V++
Sbjct: 386 DMLQAEVGVDVRLTDLIAGSDERTLIITSREGPDHELFPAQEALLHIQTFIVDL------ 439
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV 416
G +K + + +LV + + C G S +S+++ T +++++ E++ CA ++D
Sbjct: 440 --GPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPREELPSCALESDE 496
Query: 417 VIQISGEYKNVQNALSEVVGRLR 439
+IQI GE + +NAL +V +LR
Sbjct: 497 LIQIVGEIRAARNALMQVTTKLR 519
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS--ALEYL 329
Q + R+L A G + + + Q+ SGA+I+ P RV+ + L
Sbjct: 107 QTTSFRILCPESKAYGF---PASFINNAQDDSGAIITIHPPFPGDPVRVIETADGTLREA 163
Query: 330 DTR---HSPVQNAAVLVFARSVEVEGQQGFSSGE---------NKGDAVAVSILVGADFV 377
D R SP Q A ++V R +E + G GE ++G V ++V V
Sbjct: 164 DGRPPMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRG-KVTTRLIVPRQHV 222
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG-CAAQNDVVIQISGEYKNVQNALSEVVG 436
GCL G G + +M T T I+++ EQ + C + ++ V+Q+ GE NV+ A++ +
Sbjct: 223 GCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAIISD 282
Query: 437 RLRHNLKSGEILNEARPRSPSGRVGGPALHKLHQS 471
RL+ +L R R P R H++ Q+
Sbjct: 283 RLKESLH--------RDRGPFLRGRNSPEHRISQA 309
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
+P D + FR++CP L+G II ++ + + GSD R +++
Sbjct: 358 IPYDEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSREG 417
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
D E+ QEA++ + + V+ D D++ LL +++
Sbjct: 418 PDH--------------ELFPAQEALLHIQTFI------VDLGPDKDNIITTRLLVPSSE 457
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTT 196
I G+ G +++ ++ ++ A + +LP P+CA D+LIQI G A + AL+ VTT
Sbjct: 458 IACFEGRDG-SLSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNALMQVTT 516
Query: 197 CLQ 199
L+
Sbjct: 517 KLR 519
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 211/468 (45%), Gaps = 69/468 (14%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS-GSI 80
+ V+FR++C G +IG+ G ++ + + T+ I E S +R+I + G GS+
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSV 87
Query: 81 DR-RIMFCENDV-------VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG 132
R ++ N+V + EVS Q A+IRVF EA GD V+ C
Sbjct: 88 SRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVF------EALNFGDCTSSTVS-CN 140
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGA----KIVMLPPPACAAIDDQLI--QITGATL- 185
LL + + V+GK G + R+ E+G K ++ +C I +I G L
Sbjct: 141 LLMEGSHVVTVIGKNGELMQRILEETGCNSLIKALLFGSSSCRIIHGTYARDKIEGNRLS 200
Query: 186 AVKKALVAVTTCLQH---LST----MEKSPICFNRPIE-KVFYSNSSDPH---------- 227
AV KALV++++ LQ +ST E P RP+E + DPH
Sbjct: 201 AVMKALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDPHGSLHRHVEIS 260
Query: 228 ------REFF-----PHLSLVPPLTGNPSDNASEFHSSSAD--ADRDHPGLDKKGRKQEV 274
R FF P + +P +PS + S+S + P K ++V
Sbjct: 261 QEDALVRPFFRTITQPRIDYLP----HPSYDHRLITSASKNPPVTIKQPLQASKDDIRQV 316
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHS 334
L++L S +AS +I RS+ +AS IS ER+VTI+A E S
Sbjct: 317 DLKILCSNESASVVIK-----TRSVTDAS---ISVGDRHPDCDERLVTITAFEKTKDITS 368
Query: 335 PVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
Q A VLVF+ E + SG ++ ++V ++ + CL G + ++
Sbjct: 369 ESQRALVLVFSNMYENATAKVLDSGLT--SSITARLVVRSNQINCLLGEEGRIKTTIQQR 426
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
TG I ++ EQ C ++N+ V+QISGE+ NV+ A+++V LR +L
Sbjct: 427 TGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDL 474
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 201/461 (43%), Gaps = 81/461 (17%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D V +RL+CPT +G +IG+ G +I + R +T R+ G+D RVILV
Sbjct: 55 DASVRYRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADERVILVASG---- 110
Query: 82 RRIMFCENDVVV-EGGEVSSTQE-AVIRVFERMWEVEAEVEGDGD--------------G 125
+D+ V E GE +T E A+ R+F+ + E G G
Sbjct: 111 -------DDLTVGEDGEGMTTAEVALFRIFDTITGEEGVTAARGGEGEGEGEASGGSTRG 163
Query: 126 DDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITG 182
C LL ++G ++GKGG ++ +R SGA + ++P PACA+ D+L+QIT
Sbjct: 164 ASTPICRLLVPRVQVGSLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDELLQITA 223
Query: 183 --------------ATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHR 228
+ +VK AL + L+ + + P E N +
Sbjct: 224 PSRDADGAERDQKLSMASVKNALRMIAKHLREYPSKNAATESNRSPFEAFMIGNKT---- 279
Query: 229 EFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGI 288
PH + P N ++ + + PG E+ R+L +
Sbjct: 280 --APHAGVESPGAKNGGHMSTRMNLNGVYV----PG------GTEITFRLLCPVSKTGSV 327
Query: 289 IGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVF--AR 346
IG+ G +++ +++ +GA + + + ER++ +S+ D +P+ A V +F R
Sbjct: 328 IGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSS---DDGLAPMLAAQVALFRVYR 384
Query: 347 SVEVEGQQGFSSGENKGDAVAV--SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
+ E+ G+ + + +LV +GCL G G S + ++ + TG ++++
Sbjct: 385 CIV----------ESAGNEIPLPFRLLVQTSQIGCLIGKGGSIIKQIRNETGATVRVLPS 434
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALS--EVVGRLRHNLK 443
E + C A +D +++I G++ AL V GRLR N++
Sbjct: 435 EALPSC-ANDDELLEI-GQWPADACALGIRIVSGRLRGNIR 473
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER 319
R G + + R V R+L +IGK G ++++ + +GA + A + ER
Sbjct: 44 RGEHGSNGEFRDASVRYRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADER 103
Query: 320 VVTISALEYLDTRH--SPVQNAAVLVFARSVEVEGQQGFSSGE--------------NKG 363
V+ +++ + L + A V +F + G++G ++ +G
Sbjct: 104 VILVASGDDLTVGEDGEGMTTAEVALFRIFDTITGEEGVTAARGGEGEGEGEASGGSTRG 163
Query: 364 DAVAVS-ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ + +LV VG L G G + +S + +G ++++ + CA+Q D ++QI+
Sbjct: 164 ASTPICRLLVPRVQVGSLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDELLQITA 223
Query: 423 EYKN--------------VQNALSEVVGRLRH 440
++ V+NAL + LR
Sbjct: 224 PSRDADGAERDQKLSMASVKNALRMIAKHLRE 255
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 164/356 (46%), Gaps = 37/356 (10%)
Query: 103 EAVIRVFERMWEVEAEVEGDGDGDDVAYCGL--LANTTKIGVVVGKGGRNVTRMRIESGA 160
+AV VF+R++ E E A L L ++ G ++GKGG V +M ++G
Sbjct: 205 KAVSLVFDRIFATEGNNETGNASAASAPVSLRMLVLYSQAGWLLGKGGSVVKQMAADNGC 264
Query: 161 KIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKV 218
+I +L P+CA ++D+L QITG +V+K L AV+ L E +
Sbjct: 265 EIRVLKDNLPSCALLNDKLCQITGEIDSVRKGLNAVSEVLLAHPPKETDAV--------- 315
Query: 219 FYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH------SSSADADRD----HPGLDKK 268
+D H SL G PS S FH S A+ D P +
Sbjct: 316 -----ADVHSSGSSSRSLFSQPDGLPSGMQSNFHIPLQGPPSQANGPFDIVDLQPPIHGH 370
Query: 269 GRK--QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
+ ++ RML IIGK G IV+++QN +G I + K+ +R+++IS
Sbjct: 371 ASVAIESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGP 430
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
+ SP QNA +L R + S + K ++V + VGC+ G G S
Sbjct: 431 AHPSDGISPAQNA-ILHVQRKIM------LPSSDKKEGPATCRLIVSGNQVGCVLGKGGS 483
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
++EM ++G I ++ +++ ++D VIQI+G + +Q AL +V RLR++L
Sbjct: 484 IIAEMRKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNHL 539
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 37/217 (17%)
Query: 9 GYSSKRRGPLNLPD-------------DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTK 55
G S+ GP ++ D + +SFR++CP VG +IG+ G+I+ +I+ DT
Sbjct: 349 GPPSQANGPFDIVDLQPPIHGHASVAIESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTG 408
Query: 56 CRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFER-MWE 114
C I P +D R+I + G I S Q A++ V + M
Sbjct: 409 CEIKVLDTVPKTDDRIISISGPAHPSDGI--------------SPAQNAILHVQRKIMLP 454
Query: 115 VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACA 171
+ EG A C L+ + ++G V+GKGG + MR SGA IV+L P
Sbjct: 455 SSDKKEGP------ATCRLIVSGNQVGCVLGKGGSIIAEMRKLSGAFIVVLSKDKIPRGV 508
Query: 172 AIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSP 208
D++IQI G+ A+++AL+ VT L++ ++ P
Sbjct: 509 PEHDEVIQINGSCEAIQEALMQVTARLRNHLFRDRMP 545
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
+ S + + V FR++CP G +IG+ G+II+ IR++T+ RI + PG D
Sbjct: 30 HPSPHKSQFKIEPGVPIFRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPGCDE 89
Query: 70 RVILVVGS 77
RVI + +
Sbjct: 90 RVIFITAA 97
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 60/444 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
SFR++CP V G S I+ +R DT + +PG RVI RR
Sbjct: 84 TTSFRILCPQSKVYGF---PPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGA---RR 137
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD------DVAYCG----- 132
+ S QEA++ V R+ E E + +GD DG+ D G
Sbjct: 138 ------EADGRPPSFSPAQEALLMVHRRILETEPD-DGDEDGEYGPRAKDARDRGKVTTR 190
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP----PPACAAIDDQLIQITGATLAVK 188
L+ +G ++GKGG+ + +MR E+ I +LP P C ++ ++++Q+ G VK
Sbjct: 191 LIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVK 250
Query: 189 KALVAVTTCLQHLSTMEKSPIC--FNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD 246
KA+ ++ L+ ++ P N P + P + + + P P
Sbjct: 251 KAVAIISDRLKESLHRDRGPFRGRMNSPEHRF-------PQEDEYYGGAQQMPAYEEPYG 303
Query: 247 NASEFHSSSADADRDHPG--LDKKGRK---------QEVALRMLFSGWTASGIIGKRGAI 295
+ ++++ + PG D G K ++ R+L + ++G R +
Sbjct: 304 RPDQIRNNTS---MEPPGYEFDSNGGKINDHTEILFDDIIFRILCPSDKVNSLVGTRDGL 360
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
+ LQ G I L S ER++ I++ E D P Q A + + V++
Sbjct: 361 LEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDL----- 415
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
G +K + + +LV + + C G S +S+++ T +++++ + + CA ++D
Sbjct: 416 ---GPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESD 471
Query: 416 VVIQISGEYKNVQNALSEVVGRLR 439
+IQI GE + ++AL ++ +LR
Sbjct: 472 ELIQIVGEIRAARDALVQITAKLR 495
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
L DD++ FR++CP+ V L+G ++ ++ D I GSD R+I++
Sbjct: 335 LFDDII-FRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREG 393
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
D E+ QEA++ + + V+ D D++ LL +++
Sbjct: 394 PDH--------------ELFPAQEALLHLQTHI------VDLGPDKDNIITTRLLVPSSE 433
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTT 196
I G+ G +++ ++ ++ A + +LP P+CA D+LIQI G A + ALV +T
Sbjct: 434 IACFEGRDG-SLSDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITA 492
Query: 197 CLQ 199
L+
Sbjct: 493 KLR 495
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 286 SGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS--ALEYLDTR---HSPVQNAA 340
S + G + + +++ + A+++ P RV+ S A D R SP Q A
Sbjct: 94 SKVYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGRPPSFSPAQEAL 153
Query: 341 VLVFARSVEVEGQQGFSSGE---NKGDA-----VAVSILVGADFVGCLTGSGSSAVSEME 392
++V R +E E G GE DA V ++V VGCL G G + +M
Sbjct: 154 LMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLGKGGKIIEQMR 213
Query: 393 DVTGTDIKLVGGEQ-VLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEA 451
T T I+++ +Q C + ++ V+Q+ GE V+ A++ + RL+ +L
Sbjct: 214 AETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKESLHRDRGPFRG 273
Query: 452 RPRSPSGRVGGPALHKLHQSVALSPEFEQ 480
R SP R P + + P +E+
Sbjct: 274 RMNSPEHRF--PQEDEYYGGAQQMPAYEE 300
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 147/322 (45%), Gaps = 71/322 (22%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFP-GSDHRVILVV---GSGSI 80
V FRL+CP G +IG+ GS+I ++ T +I P S+ RV+L++ G
Sbjct: 242 VHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKD 301
Query: 81 DRRIMFCENDVVVE-------------GGE----VSSTQEAVIRVFERMW--EVEAEVEG 121
D + EN E GG+ SS Q A++RV ER+ + A V+G
Sbjct: 302 DSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASVDG 361
Query: 122 DG--DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVM-----LPPPACAAID 174
DG G+ + C ++ ++ ++ KGG+ + R+R +SGA + + +PP CA
Sbjct: 362 DGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPP--CAFPG 419
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL 234
D +IQITG +VKKAL+ +T CLQ + + P + P
Sbjct: 420 DVVIQITGKFSSVKKALLLITNCLQE---------------------SGAPPTWDECPF- 457
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHP---------GLDKKGRKQEVALRMLFSGWTA 285
P G P D +HS DHP ++ ++EV+ R+L
Sbjct: 458 ----PQPGYPPD----YHSMEYHPQWDHPPNPMPEDVVPFNRPVVEEEVSFRLLCPADKV 509
Query: 286 SGIIGKRGAIVRSLQNASGALI 307
+IGK GA+VR+LQN SGA I
Sbjct: 510 GSLIGKGGAVVRALQNESGASI 531
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL-TKSGERVVTISA----- 325
+ V R+L IIGK G+++R LQ+ +G+ I + S ERVV I A
Sbjct: 240 ESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 299
Query: 326 ---LEYLDTRH----SPVQ------------------NAAVLVFARSVE--VEGQQGFS- 357
D+ + P Q ++A + R +E V G S
Sbjct: 300 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 359
Query: 358 --SGENKGDAVAVS-ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
G +KG++ ++ ++V + V L G + + + +G +++ +Q+ CA
Sbjct: 360 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 419
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHN 441
DVVIQI+G++ +V+ AL + L+ +
Sbjct: 420 DVVIQITGKFSSVKKALLLITNCLQES 446
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 192/444 (43%), Gaps = 60/444 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
SFR++CP V G S I+ +R DT + +PG RVI RR
Sbjct: 84 TTSFRILCPQSKVYGF---PPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGA---RR 137
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD------DVAYCG----- 132
+ S QEA++ V R+ E E + +GD DG+ D G
Sbjct: 138 ------EADGRPPSFSPAQEALLMVHRRILETEPD-DGDEDGEYGPRAKDARDRGKVTTR 190
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP----PPACAAIDDQLIQITGATLAVK 188
L+ +G ++GKGG+ + +MR E+ I +LP P C ++ ++++Q+ G VK
Sbjct: 191 LIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVK 250
Query: 189 KALVAVTTCLQHLSTMEKSPI--CFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD 246
KA+ ++ L+ ++ P N P + P + + + P P
Sbjct: 251 KAVAIISDRLKESLHRDRGPFRGRMNSPEHRF-------PQEDEYYGGAQQMPAYEEPYG 303
Query: 247 NASEFHSSSADADRDHPG--LDKKGRK---------QEVALRMLFSGWTASGIIGKRGAI 295
+ ++++ + PG D G K ++ R+L + ++G R +
Sbjct: 304 RPDQIRNNTS---MELPGYEFDSNGGKINDHTEILFDDIIFRILCPSDKVNSLVGTRDGL 360
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
+ LQ G I L S ER++ I++ E D P Q A + + V++
Sbjct: 361 LEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDL----- 415
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
G +K + + +LV + + C G S +S+++ T +++++ + + CA ++D
Sbjct: 416 ---GPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESD 471
Query: 416 VVIQISGEYKNVQNALSEVVGRLR 439
+IQI GE + ++AL ++ +LR
Sbjct: 472 ELIQIVGEIRAARDALVQITAKLR 495
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
L DD++ FR++CP+ V L+G ++ ++ D I GSD R+I++
Sbjct: 335 LFDDII-FRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREG 393
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
D E+ QEA++ + + V+ D D++ LL +++
Sbjct: 394 PDH--------------ELFPAQEALLHLQTHI------VDLGPDKDNIITTRLLVPSSE 433
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTT 196
I G+ G +++ ++ ++ A + +LP P+CA D+LIQI G A + ALV +T
Sbjct: 434 IACFEGRDG-SLSDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITA 492
Query: 197 CLQ 199
L+
Sbjct: 493 KLR 495
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 286 SGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS--ALEYLDTR---HSPVQNAA 340
S + G + + +++ + A+++ P RV+ S A D R SP Q A
Sbjct: 94 SKVYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARREADGRPPSFSPAQEAL 153
Query: 341 VLVFARSVEVEGQQGFSSGE---NKGDA-----VAVSILVGADFVGCLTGSGSSAVSEME 392
++V R +E E G GE DA V ++V VGCL G G + +M
Sbjct: 154 LMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVGCLLGKGGKIIEQMR 213
Query: 393 DVTGTDIKLVGGEQ-VLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEA 451
T T I+++ +Q C + ++ V+Q+ GE V+ A++ + RL+ +L
Sbjct: 214 AETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDRLKESLHRDRGPFRG 273
Query: 452 RPRSPSGRVGGPALHKLHQSVALSPEFEQ 480
R SP R P + + P +E+
Sbjct: 274 RMNSPEHRF--PQEDEYYGGAQQMPAYEE 300
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 203/475 (42%), Gaps = 82/475 (17%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FRL+CP +G +IG+ G +I ++R +T R+ G+D RV+LV +
Sbjct: 70 VQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVASG----EEL 125
Query: 85 MFCENDVVVEGGE--VSSTQEAVIRVFERMW-EVEAEVEGDGDGDD-------------- 127
M + D G + V++ + A+ R+F+ + E ++G DG
Sbjct: 126 MMDDGD----GSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSSTG 181
Query: 128 ----------VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAID 174
V C LL ++G ++GKGG ++ +R SGA + ++P P CA+
Sbjct: 182 GERSMNGGRAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATMLPTCASRG 241
Query: 175 DQLIQITG------------ATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSN 222
D+L+QIT A +VK AL V L+ T + F P+E
Sbjct: 242 DELLQITAPVRDTDGNDVDLALASVKSALRMVAKNLREYPTKMATSESFRSPLEAFM--- 298
Query: 223 SSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRK----QEVALRM 278
L + P + + + ++ G E+ R+
Sbjct: 299 -----------LGIKPGANADGDGGNGAGIAGGSSGGHMSTRMNLNGVYVPGGTEIMFRL 347
Query: 279 LFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQN 338
L +IG+ G +++ +++ +GA + + + ER++ +S+ D +P+
Sbjct: 348 LCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSS---NDDGLAPMLA 404
Query: 339 AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTD 398
A V +F V SSG + + +LV +GCL G G S + ++ + TG
Sbjct: 405 AQVALF----RVYRCIVDSSGSDV--PLPFRLLVQTSQIGCLIGKGGSIIRQIRNETGAT 458
Query: 399 IKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALS--EVVGRLRHNL--KSGEILN 449
++++ + + CA +D +++I G++ AL V GRLR N+ K+ E LN
Sbjct: 459 VRVLPSDALPACANADDELLEI-GQWPADACALGIRIVSGRLRGNMRHKAAERLN 512
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 193/433 (44%), Gaps = 30/433 (6%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDT---KCRIHCEGGFP-GSDHRVILVVGSG 78
DVV FRL+ P R ++++ +RR T R+ G+P + RV +V+G
Sbjct: 36 DVVVFRLLLPRAFGDEDAMRLYAVVAPLRRHTAGLHVRVDALEGYPEDAASRVAVVLGPT 95
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
S R + + E ++S QEA++ V + + V + C +L
Sbjct: 96 SPTRPVE-ASSSSSGEPLQLSPAQEALVSVVDVGGVLHRVV---ARAPEFVSCLVLVEAA 151
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDD--QLIQITGATLAVKKALVAVTT 196
+ + G+G + ++ L A ++ ++I+ITG ++KA+VA+++
Sbjct: 152 GLEAL-GRGTLEAIASETNAELRVTSLAEGATPSVHSPKEVIEITGDRTTIRKAIVALSS 210
Query: 197 CLQ---HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
LQ H ++ S P + +S P + L S + +
Sbjct: 211 YLQGDLHACSLTTS---VTTPSPMFPWKSSEVPEPNYGD-------LHSGVSTKCANINV 260
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
D +D G + Q+++ R+L A G+IGK+G I++ + +GA I P
Sbjct: 261 PWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPF 320
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
+ ERV+TISALE +HS VQ+A + +F R EVE F E + +LV
Sbjct: 321 SGCMERVITISALES-PGKHSKVQSAILCIFDRMEEVERNLMFGKPE-----CSARVLVP 374
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
L G G + + EM TG I+++ V CA+ + V+QI+G NV++AL
Sbjct: 375 KSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFV 434
Query: 434 VVGRLRHNLKSGE 446
V +LR++ S +
Sbjct: 435 VSEKLRNHAFSSK 447
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 161/378 (42%), Gaps = 57/378 (15%)
Query: 100 STQEAVIRVFERMWEVEAEVE-GDGDGDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIE 157
S A++ VF+R++ E E GD G+ LL +++G ++G G + +M +
Sbjct: 201 SPMNAILHVFDRIFITEIGNESGDPSGERTPVSFRLLVLDSQVGWLLGNRGSVIKQMSAD 260
Query: 158 SGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK-------SP 208
SG +I + P CA + D+L QITG +V+K L AV L E S
Sbjct: 261 SGCEIRVSKEKLPLCALLKDELCQITGELDSVRKGLNAVAQVLLTHPPRESDVLPSGLSS 320
Query: 209 ICFNR------------------------PIEKVFYSNSSDPHREFFPHLSLVPPLTGNP 244
FNR P + + + P F S +PP P
Sbjct: 321 HAFNRSDALPPGMQPNFSLPFQGPSHARGPFDSIDPRPNIPPFPTFPDQRSNIPPFPAFP 380
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
D H+S + + R+L S IIGK G ++++Q +G
Sbjct: 381 -DALMHSHASVP--------------PEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTG 425
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
I + KS +RV+ IS + SP QNA + V R + NK
Sbjct: 426 CEIKILETVPKSEDRVIVISGPAHPGDGISPAQNAILHVQRRITP-------PTANNKEG 478
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY 424
A ++V + VGCL G G S ++EM ++ I ++ +++ ++D V+QI+G+
Sbjct: 479 AAISRLIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDS 538
Query: 425 KNVQNALSEVVGRLRHNL 442
+ +Q AL ++ RLR++L
Sbjct: 539 EAIQEALMQITARLRNHL 556
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 152/354 (42%), Gaps = 67/354 (18%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
++P + ++FRL+C + VG +IG+ G+ I +I++DT C I P S+ RVI++ G
Sbjct: 389 SVPPEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPA 448
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
G +S Q A++ V R+ A + + A L+ +
Sbjct: 449 H--------------PGDGISPAQNAILHVQRRITPPTA-----NNKEGAAISRLIVSPN 489
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVT 195
++G ++GKGG + MR S A IV+L P D+++QITG + A+++AL+ +T
Sbjct: 490 QVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQEALMQIT 549
Query: 196 TCLQ-HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP--HLSLVPPLTGNPSDNASEFH 252
L+ HL + + N ++ F S DP F H S P + NAS+FH
Sbjct: 550 ARLRNHLFRDRMAAMGPN--MQPPF--GSLDPQFGAFAGSHESTSPRIY----PNASQFH 601
Query: 253 SS-------------SADADRD---------HPGLDKKG----------RKQEVALRMLF 280
+A RD PG+ +G + ++
Sbjct: 602 KDFMGRPLDEMPAPWNAKGMRDVGDPMSISGMPGMPHRGIGGFSGAGHSSMPNITRDIMV 661
Query: 281 SGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHS 334
+ + G G + ++ SGA+I+F P+ + + IS LD H+
Sbjct: 662 PRFVIPALCGHDGGCLNMIREFSGAMITFTEPIADAADTPFMISG--TLDQMHA 713
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
++S ++ PL + V R++CPT G +IG+ G II+ IR++ +I + PG D
Sbjct: 30 HTSSQQPPLVIQPGVPLIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDE 89
Query: 70 RVILVV 75
RVI++
Sbjct: 90 RVIVIT 95
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 21/144 (14%)
Query: 338 NAAVLVFARS--VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
NA + VF R E+ + G SGE V+ +LV VG L G+ S + +M +
Sbjct: 204 NAILHVFDRIFITEIGNESGDPSGERT--PVSFRLLVLDSQVGWLLGNRGSVIKQMSADS 261
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQ---NALSEVVGRLRHNLKSGEILNEAR 452
G +I+ V E++ CA D + QI+GE +V+ NA+++V+ L H + ++L
Sbjct: 262 GCEIR-VSKEKLPLCALLKDELCQITGELDSVRKGLNAVAQVL--LTHPPRESDVL---- 314
Query: 453 PRSPSGRVGGPALHKLHQSVALSP 476
PSG + H ++S AL P
Sbjct: 315 ---PSGL----SSHAFNRSDALPP 331
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 190/437 (43%), Gaps = 53/437 (12%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID--- 81
SFR++CP G S I + D+ I F G RVI + D
Sbjct: 93 TSFRILCPESKTYGF---PASFIIKAQDDSGAIITIHAPFAGDPVRVIEMADGVPRDVDG 149
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD------DVAYCG--- 132
R MF S QEA+I V R+ E E + +GD DG+ D G
Sbjct: 150 RPPMF------------SPAQEALIMVHRRILETEPD-DGDEDGEYGPRGKDARDRGKVT 196
Query: 133 --LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP----PPACAAIDDQLIQITGATLA 186
L+ +G ++GKGG+ + +MR E+ I +LP P C ++ ++++QI G
Sbjct: 197 TRLVVPRLHVGCLLGKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNC 256
Query: 187 VKKALVAVTTCLQHLSTMEKSPI-CFNRPIEKVFYSNSSD---PHREFFPHLSLVPPLTG 242
VKKA+ ++ L+ ++ P N P ++ ++ + E F + G
Sbjct: 257 VKKAVAIISDRLKESLHRDRGPFRGRNSPEHRISQADEYQQMPAYEEPFARFDQIR-NNG 315
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA 302
+ EF S+ + + +HP E+ R+L A+ ++G R I+ LQ
Sbjct: 316 SMEPPGYEFDSNGSKFN-EHPEFPY----DEIIFRILCPNDKANNLVGSRDGILEMLQVE 370
Query: 303 SGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
G + + S ER V I++ E D P Q A + + V++ G +
Sbjct: 371 VGVDVRLTDLVVGSDERTVIITSREGPDHELFPAQEALLHIQTHIVDL--------GPDN 422
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ + +LV + V C G S +S+++ T +++++ E++ CA ++D +IQI G
Sbjct: 423 DNIITTRLLVPSSEVACFEGRDGS-LSDIQRQTSANVQILPREELPSCALESDELIQIVG 481
Query: 423 EYKNVQNALSEVVGRLR 439
+ ++AL +V ++R
Sbjct: 482 GIRAARSALMQVTTKIR 498
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS--ALEYL 329
Q + R+L S G + + Q+ SGA+I+ AP RV+ ++ +
Sbjct: 91 QATSFRIL---CPESKTYGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEMADGVPRDV 147
Query: 330 DTR---HSPVQNAAVLVFARSVEVEGQQGFSSGE---------NKGDAVAVSILVGADFV 377
D R SP Q A ++V R +E E G GE ++G V ++V V
Sbjct: 148 DGRPPMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRG-KVTTRLVVPRLHV 206
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQ-VLGCAAQNDVVIQISGEYKNVQNALSEVVG 436
GCL G G + +M T T I+++ +Q C + ++ V+QI GE V+ A++ +
Sbjct: 207 GCLLGKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISD 266
Query: 437 RLRHNL 442
RL+ +L
Sbjct: 267 RLKESL 272
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
P D + FR++CP L+G I+ ++ + + GSD R +++
Sbjct: 337 FPYDEIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSREG 396
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
D E+ QEA++ + + V+ D D++ LL +++
Sbjct: 397 PDH--------------ELFPAQEALLHIQTHI------VDLGPDNDNIITTRLLVPSSE 436
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTT 196
+ G+ G +++ ++ ++ A + +LP P+CA D+LIQI G A + AL+ VTT
Sbjct: 437 VACFEGRDG-SLSDIQRQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTT 495
Query: 197 CLQHLSTMEKS 207
++ E S
Sbjct: 496 KIRSYIYREMS 506
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 202/457 (44%), Gaps = 81/457 (17%)
Query: 12 SKRRGPLNLPDDV---------VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
SKRR NL DD +R +CP G +IG+ G I IR +TK +
Sbjct: 25 SKRR---NLHDDTDQNVIGSEETVYRYLCPVKKTGSIIGKGGDIAKQIRSETKSNMRINE 81
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEG 121
PG + RV+ + + E + + GE V +A+ +V + + +G
Sbjct: 82 ALPGCEERVVTIYSTNE--------ELNHFGDDGELVCPALDALFKVHDMVVADIDHDDG 133
Query: 122 D-----GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAI- 173
+ G+ V +L + +IG V+GKGG+ + +R ++ A+I ++ P+CA
Sbjct: 134 NDDDDLGEKQTVTV-RMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPSCALTL 192
Query: 174 -DDQLIQITGATLAVKKALVAVTTCL-------QHLSTMEKSPICFNRPIEKVFYSNSSD 225
D+L+QI G L V++AL V + L QHL S + ++P + + +
Sbjct: 193 SHDELLQIIGEPLVVREALYQVASLLHANPSRFQHLLLSSSSSM--HQPGAMLMSAALTS 250
Query: 226 PHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTA 285
HR + + ADA +E + +
Sbjct: 251 SHRNYAVRRDI-------------------ADA-------------REFCVCFICPAENV 278
Query: 286 SGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFA 345
G+IGK G + ++ +GA I T + ++ IS+ E+ + + SP NAA+ +
Sbjct: 279 GGVIGKGGGFINQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQ-SPAVNAAIRLQQ 337
Query: 346 RSVEVEGQQGFSSGENKGD-AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
R E G++ D A++ +LV + +GCL G G + +SEM VT +I+++
Sbjct: 338 RCSE-------KVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQK 390
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
E V A +++ ++QI+G AL++V+ RLR N
Sbjct: 391 EDVPKIAREDEEMVQITGNPDAAMKALTQVILRLRAN 427
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 68/376 (18%)
Query: 98 VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG---------LLANTTKIGVVVGKGG 148
+ S +A+ VF+R++ GD ++ LL ++ G ++GKGG
Sbjct: 211 IPSALKAISLVFDRIFAA-------GDNNETGNASAASTPVSLRLLVLYSQAGWLLGKGG 263
Query: 149 RNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
+ +M ++G +I +L P+CA ++D+L QITG +V+K L AV+ L E
Sbjct: 264 SVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQITGEIDSVRKGLNAVSELLLAHPPKET 323
Query: 207 SPI------------CFNRP------IEKVFYSNSSDPHREFFPH--LSLVPPLTGNPSD 246
+ FN+ ++ F+ P + P + L PP+ G
Sbjct: 324 DAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIPLQGPSQANGPFDIIDLQPPIHG---- 379
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
H+S + ++ RML IIGK G IV+++Q +G
Sbjct: 380 -----HASVP--------------IESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCE 420
Query: 307 ISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
I + KS +R+++IS + SP QNA +L R + + +S + +G A+
Sbjct: 421 IKVLDTVPKSEDRIISISGPAHPSDGISPAQNA-ILHVQRKIMLP-----TSDKKEGPAI 474
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKN 426
++V A+ VGC+ G G S ++EM ++G I ++ +++ ++D V+QISG +
Sbjct: 475 C-RLIVSANQVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEA 533
Query: 427 VQNALSEVVGRLRHNL 442
+Q AL ++ RLR++L
Sbjct: 534 IQEALMQITARLRNHL 549
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 25/198 (12%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
G ++P + +SFR++CP VG +IG+ G+I+ +I++DT C I P S+ R+I +
Sbjct: 379 GHASVPIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISIS 438
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFER-MWEVEAEVEGDGDGDDVAYCGLL 134
G +S Q A++ V + M + EG A C L+
Sbjct: 439 GPAH--------------PSDGISPAQNAILHVQRKIMLPTSDKKEG------PAICRLI 478
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKAL 191
+ ++G V+GKGG + MR SGA I++L P D+++QI+G+ A+++AL
Sbjct: 479 VSANQVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEAL 538
Query: 192 VAVTTCLQ-HLSTMEKSP 208
+ +T L+ HL +++ P
Sbjct: 539 MQITARLRNHLFRVDRMP 556
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
+SS + + V FR++CP G +IG+ G+II+ IR +T+ RI + PG D
Sbjct: 30 HSSPHKSQFKIEPGVPFFRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDE 89
Query: 70 RVILVV 75
RVI +
Sbjct: 90 RVIFIT 95
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 188/452 (41%), Gaps = 66/452 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+V +RL+CP +G +IG+ GS+I +R T RI E G R+I + S
Sbjct: 30 MVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDE---- 85
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
G E+ QEA+ V R+ E +A E D +L ++G V
Sbjct: 86 ----------PGAELCRAQEALFAVQSRLSEADAAQE-----DTCCVVRMLVEQAQVGCV 130
Query: 144 VGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL-- 198
+GKGG ++ +R +GA I + PACA +D L+ + G AV AL ++ L
Sbjct: 131 LGKGGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRT 190
Query: 199 --QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
Q ++P+ FN + + P + + P+ P + H+
Sbjct: 191 HSQRKPQQARAPMTFN---ITAVATAAVQPEQAQHRRQPMREPVLA-PIARPHQCHNCLP 246
Query: 257 DADRDHP---GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI------ 307
DA P + + EV LR+L +IG+RG ++R++++ +GA I
Sbjct: 247 DAHAMQPRMTAVQEASAVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGS 306
Query: 308 ----SFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS------ 357
+F K +RV+T++A E SP + A L+ ++ + G G
Sbjct: 307 QGARAFPPSEKKGVDRVITVAAAEAAGAAVSPTEEAVCLM---ALCLLGPSGLPPVPCIR 363
Query: 358 ---SGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG----- 409
G A A+S+L VG + G G + ++++ +G ++LV E
Sbjct: 364 ILVPTPQGGTAEALSLL----QVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPR 419
Query: 410 --CAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
A Q V+QI G A+ V +LR
Sbjct: 420 DVAAGQMHKVVQIEGPITATVKAVRAVCAQLR 451
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 194/438 (44%), Gaps = 63/438 (14%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
N+ D V +R +CP G +IG+ G I IR +TK + PG + RV+
Sbjct: 7 NIHDTV--YRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVV------ 58
Query: 79 SIDRRIMFCENDVVVEGGE----VSSTQEAVIRVFERMWEVEAEVEGD------GDGDDV 128
M+ N+ + G+ V +A+ +V + + + +G G+ V
Sbjct: 59 -----TMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTV 113
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAI--DDQLIQITGAT 184
+L + +IG V+GKGG+ + +R ++ A+I ++ PACA D+L+ I G
Sbjct: 114 TV-RMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEP 172
Query: 185 LAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP 244
L V++AL V + L +P R F HL L +
Sbjct: 173 LVVREALYQVASLLH------------------------DNPSR--FQHLLLSSSSSSMH 206
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
A ++ + R++ +E + + G+IGK G + ++ +G
Sbjct: 207 QPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETG 266
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
A I T + ++ IS+ E+ + + SP NAA+ + R E G++ D
Sbjct: 267 ATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSE-------KVGKDAND 318
Query: 365 -AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
A++ +LV + +GCL G G + +SEM VT +I+++ E V A +++ ++QI+G
Sbjct: 319 LAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGS 378
Query: 424 YKNVQNALSEVVGRLRHN 441
AL++V+ RLR N
Sbjct: 379 PDAAMKALTQVILRLRAN 396
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 137/276 (49%), Gaps = 26/276 (9%)
Query: 175 DQLIQITGATLAVKKALVAVTTCL-------QHLSTMEKSPICFNRPIEKVFYSNSSDPH 227
D+L+QITG VKKAL ++T L QHL T S ++ + N+ P
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTSAMSNA--HQSGGSLTGPNAGAPI 58
Query: 228 REFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG 287
P L+ P G D SE+ ++ A RD +E +LR++ G
Sbjct: 59 VGLAP---LMGPYGGYKGDTGSEWPNAFYPAPRDSVS------AKEFSLRLVCPTGNIGG 109
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
+IGK G++++ ++ SGA I + ++ + +++IS+ E+ + SP +AAV + +
Sbjct: 110 VIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISSKEFFEDPISPTIDAAVRLQPKC 169
Query: 348 VEVEGQQGFSSGENKGDAVAVS-ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQ 406
E S GD+ + +LV +GCL G G S +SEM VT +I+++ E
Sbjct: 170 SE-------KSDRESGDSTFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKEN 222
Query: 407 VLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ A+++D ++QI+G+ +NAL +V RL+ N
Sbjct: 223 LPKVASEDDEMVQITGDLDVARNALIQVTTRLKTNF 258
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 21/177 (11%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S RLVCPT +GG+IG+ GS+I IR+++ I + +D +I SI +
Sbjct: 97 SLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCII------SISSKEF 150
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
F + +S T +A +R+ + +E GD LL T++IG ++G
Sbjct: 151 FED--------PISPTIDAAVRLQPKC----SEKSDRESGDSTFTTRLLVPTSRIGCLIG 198
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
KGG ++ MR + A I +L P A+ DD+++QITG + AL+ VTT L+
Sbjct: 199 KGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDLDVARNALIQVTTRLK 255
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 194/435 (44%), Gaps = 47/435 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP +G +IGR G I +R ++K I G + R++ + +
Sbjct: 52 YRYLCPLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSE------- 104
Query: 87 CENDVVVEGGE-VSSTQEAVIRVFERMWEVEAEVEGDG--------------DGDDVAYC 131
E+++ + GE V Q+A+ V +R+ + + + V
Sbjct: 105 -ESNLFGDSGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTV 163
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVK 188
+L +IG V+GKGG+ + +R E+GA+I +L P A D+L+ I G V+
Sbjct: 164 RMLVPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVR 223
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNA 248
KAL V T L ++P + +N F + L G
Sbjct: 224 KALYQVATRLH------ENPSRSQHLLLSSSSTNMYQSGGGMFVTPTAGASLMGLYGSYK 277
Query: 249 SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
+ SS RD +G +E +LR++ G+IGK G I++ ++ S A I
Sbjct: 278 GGWSSSYYSDQRD------EGSSKEFSLRLVCPIGNIGGVIGKGGGIIKQIRQESRASIK 331
Query: 309 FAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAV 368
+ + + ++ ISA E+ + + S AA+ + R E + + GD+V
Sbjct: 332 VDSSAAEGDDCIIFISAKEFFEDQ-SATLTAALRLQPRCSE-------KTERDSGDSVIT 383
Query: 369 S-ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
+ +LV +GCL G G + +SEM +VT I+++ + + A+++D ++QI+G +
Sbjct: 384 TRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSHDVA 443
Query: 428 QNALSEVVGRLRHNL 442
NAL VV RL+ NL
Sbjct: 444 SNALLHVVLRLKANL 458
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 22/177 (12%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S RLVCP +GG+IG+ G II IR++++ I + D +I +
Sbjct: 298 SLRLVCPIGNIGGVIGKGGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAK-------E 350
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
F E+ S+T A +R+ R E + E D GD V LL ++IG ++G
Sbjct: 351 FFEDQ--------SATLTAALRLQPRCSE---KTERDS-GDSVITTRLLVPRSQIGCLMG 398
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
KGG ++ MR + A I +L P A+ DD+++QITG+ AL+ V L+
Sbjct: 399 KGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSHDVASNALLHVVLRLK 455
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 190/430 (44%), Gaps = 61/430 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP G +IG+ G I IR +TK + PG + RV+ M+
Sbjct: 46 YRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVV-----------TMY 94
Query: 87 CENDVVVEGGE----VSSTQEAVIRVFERMWEVEAEVEGD------GDGDDVAYCGLLAN 136
N+ + G+ V +A+ +V + + + +G G+ V +L
Sbjct: 95 STNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTV-RMLVP 153
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAI--DDQLIQITGATLAVKKALV 192
+ +IG V+GKGG+ + +R ++ A+I ++ PACA D+L+ I G L V++AL
Sbjct: 154 SDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALY 213
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
V + L +P R F HL L + A
Sbjct: 214 QVASLLH------------------------DNPSR--FQHLLLSSSSSSMHQPGAMLMS 247
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP 312
++ + R++ +E + + G+IGK G + ++ +GA I
Sbjct: 248 AALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTS 307
Query: 313 LTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD-AVAVSIL 371
T + ++ IS+ E+ + + SP NAA+ + R E G++ D A++ +L
Sbjct: 308 ETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSE-------KVGKDANDLAISTRLL 359
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V + +GCL G G + +SEM VT +I+++ E V A +++ ++QI+G AL
Sbjct: 360 VSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKAL 419
Query: 432 SEVVGRLRHN 441
++V+ RLR N
Sbjct: 420 TQVILRLRAN 429
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 190/430 (44%), Gaps = 61/430 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP G +IG+ G I IR +TK + PG + RV+ M+
Sbjct: 21 YRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVV-----------TMY 69
Query: 87 CENDVVVEGGE----VSSTQEAVIRVFERMWEVEAEVEGD------GDGDDVAYCGLLAN 136
N+ + G+ V +A+ +V + + + +G G+ V +L
Sbjct: 70 STNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTV-RMLVP 128
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAI--DDQLIQITGATLAVKKALV 192
+ +IG V+GKGG+ + +R ++ A+I ++ PACA D+L+ I G L V++AL
Sbjct: 129 SDQIGCVIGKGGQVIQNLRNDTNAQIRVIKDHLPACALTLSHDELLLIIGEPLVVREALY 188
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
V + L +P R F HL L + A
Sbjct: 189 QVASLLH------------------------DNPSR--FQHLLLSSSSSSMHQPGAMLMS 222
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP 312
++ + R++ +E + + G+IGK G + ++ +GA I
Sbjct: 223 AALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTS 282
Query: 313 LTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD-AVAVSIL 371
T + ++ IS+ E+ + + SP NAA+ + R E G++ D A++ +L
Sbjct: 283 ETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSE-------KVGKDANDLAISTRLL 334
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V + +GCL G G + +SEM VT +I+++ E V A +++ ++QI+G AL
Sbjct: 335 VSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKAL 394
Query: 432 SEVVGRLRHN 441
++V+ RLR N
Sbjct: 395 TQVILRLRAN 404
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 26/183 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR- 83
V FR++CP GG+IG+ G+II R DT +I + G D RVIL+V +R
Sbjct: 100 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 159
Query: 84 -IMFC-----------------ENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG 125
C N V V+ E S Q+A++RVFER+ +V+ E E
Sbjct: 160 ASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 219
Query: 126 DDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLI 178
+D+ C LLA + ++G V+G+GG+ V ++R ESGA+I +LP PACA+ D+LI
Sbjct: 220 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 279
Query: 179 QIT 181
Q+
Sbjct: 280 QVV 282
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 35/185 (18%)
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA----- 325
K +V R+L G+IGK GAI+R + +GA I + ERV+ I A
Sbjct: 97 KPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKS 156
Query: 326 ----------------------------LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
+ D SP Q A V VF R ++V+ ++
Sbjct: 157 KREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEK 216
Query: 358 SGENKGDAVAVS--ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
+ VAV +L ++ VGC+ G G V ++ +G I+++ + + CA+ D
Sbjct: 217 EKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGD 276
Query: 416 VVIQI 420
+IQ+
Sbjct: 277 ELIQV 281
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 168/350 (48%), Gaps = 32/350 (9%)
Query: 103 EAVIRVFERMWEVEAEV-EGDGDGD-DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGA 160
+A++ VF+R++ E E GD G+ + LL +++G ++GK G + +M +S
Sbjct: 247 KAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDSCC 306
Query: 161 KIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEK- 217
+I + P CA D+L QITG +V+K L V L F P ++
Sbjct: 307 EIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLL------------FTHPPKES 354
Query: 218 -VFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGR----KQ 272
V +++S R FF ++PP G + F + + P G +
Sbjct: 355 DVLGAHNSGSSRSFFNQPDVLPP--GMQPNLHLPFQGPNVAHLPNFPEALMHGHGSVPPE 412
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
+ R+L S GIIGK G ++S+QN +G I + KS +R+V IS +
Sbjct: 413 PLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDG 472
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
SP QNA + V + V +S +G A+ ++V + VGCL G G S ++EM
Sbjct: 473 ISPAQNAILHVQRKIVP-------TSNTKEGPAIC-RLIVSPNQVGCLLGKGGSIIAEMR 524
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
++G I ++ +++ +ND V+QISG + +Q AL ++ RLR++L
Sbjct: 525 KLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHL 574
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 23/185 (12%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
++P + ++FRL+C + VGG+IG+ G+ I SI+ DT C I P S+ R++ + G
Sbjct: 408 SVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPA 467
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
G +S Q A++ V ++ EG A C L+ +
Sbjct: 468 H--------------PGDGISPAQNAILHVQRKIVPTSNTKEGP------AICRLIVSPN 507
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVT 195
++G ++GKGG + MR SGA I++L P +D+++QI+GA+ A+++AL+ +T
Sbjct: 508 QVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQIT 567
Query: 196 TCLQH 200
L++
Sbjct: 568 ARLRN 572
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
FR++CPT G +IG+ G II+ IR++T +I + PG D RVI++
Sbjct: 90 FRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVIT 138
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 18/159 (11%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V+FRL+C VG +IG+SG +I S++ T +I P S RVILV
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPS------ 78
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V E GE+S+ QEA+++VF+R+ +V A G GD V C LLA T+++G V+
Sbjct: 79 -------VTEDGELSTAQEALLKVFDRVLDVAA---GTEVGDLVVSCRLLAETSQVGAVI 128
Query: 145 GKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQIT 181
GK G+ V ++R+++G KI +L PA A D++++++
Sbjct: 129 GKAGKVVEKIRMDTGCKIRVLNEGLPAGTAPSDEIVEVS 167
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYL-DTR 332
V R+L IIGK G +++SLQ A+GA I S +RV+ +SA D
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTEDGE 84
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGD-AVAVSILVGADFVGCLTGSGSSAVSEM 391
S Q A + VF R ++V ++G GD V+ +L VG + G V ++
Sbjct: 85 LSTAQEALLKVFDRVLDV------AAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKI 138
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
TG I+++ E + A +D ++++S
Sbjct: 139 RMDTGCKIRVL-NEGLPAGTAPSDEIVEVS 167
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI 58
D VVS RL+ T VG +IG++G ++ IR DT C+I
Sbjct: 110 DLVVSCRLLAETSQVGAVIGKAGKVVEKIRMDTGCKI 146
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 36/335 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D ++ +R++CP V+G +IG+SG +I+SIR +++ R+ FPG+ R+I + I
Sbjct: 33 DGLIVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCH--IK 90
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD--DVAYCGLLANTTK 139
+ +D + + Q+A+++V + A + GD D D C +L ++
Sbjct: 91 EKEDVDVDDDFNHTNPLCAAQDALLKVHAAISNAVASL-GDSDKRLRDKEECQILVPASQ 149
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQLIQITGATLAVKKALVA 193
++GK G + R+R ++ I ++ P +CA D + ITG + AVKKAL A
Sbjct: 150 SANIIGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALFA 209
Query: 194 VTTCLQHLSTMEKSPI-------------CFNRPIEKV--FYSNSSD--PHREFFPHL-- 234
V+ + + E+ P+ + PI + FY N+ R P L
Sbjct: 210 VSAIMYKFNPKEEIPLEATVPEPPPSIIIPSDVPIYQPGGFYPNAEPIVSSRSVPPILGA 269
Query: 235 SLVPPLTGNPSDNASEF--HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKR 292
+ +P L G D S + ++S+ P R +E+ +R+L +IGK
Sbjct: 270 THIPELQGY-GDMGSSWPVYTSTLPV---VPSFGNVSRYEELIIRVLCPFDKIGRVIGKG 325
Query: 293 GAIVRSLQNASGALISFAAPLTKSGERVVTISALE 327
G+ ++S++ ASGA I E ++T++A E
Sbjct: 326 GSTIKSIRQASGARIEVDDTKADRDECIITVTATE 360
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 18/186 (9%)
Query: 266 DKKGRKQE--VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
D KG + + R+L +IGK G ++ S+++ S A + P + +R++TI
Sbjct: 26 DDKGTNNDGLIVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITI 85
Query: 324 --------SALEYLDTRHS----PVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSIL 371
D H+ Q+A + V A G S + D IL
Sbjct: 86 YCHIKEKEDVDVDDDFNHTNPLCAAQDALLKVHAAISNAVASLG-DSDKRLRDKEECQIL 144
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV---LGCAAQNDVVIQISGEYKNVQ 428
V A + G + + + T T IK++ + CA D + I+GE + V+
Sbjct: 145 VPASQSANIIGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVK 204
Query: 429 NALSEV 434
AL V
Sbjct: 205 KALFAV 210
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 186/448 (41%), Gaps = 69/448 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID---RR 83
FR++CP G ++ +R D+ + F G RVI V + R
Sbjct: 91 FRILCPECKAYGF---PPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-----GDDVAYCG-----L 133
MF S QEA++ V R+ E +A+ + G D G L
Sbjct: 148 PMF------------SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRL 195
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP----PPACAAIDDQLIQITGATLAVKK 189
+ +G ++GKGG+ + +MR+E+ I +LP P C ++ ++++Q+ G VKK
Sbjct: 196 IVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKK 255
Query: 190 ALVAVTTCLQHLSTMEKSPIC--FNRPIEKV-------------FYSNSSDPHREFFPHL 234
A+ +T L+ ++ P N P ++ Y S + +
Sbjct: 256 AVAIITDRLKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNT 315
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
S+ PP EF S+ +HP + ++ R+L ++
Sbjct: 316 SMEPP--------GYEFDSNDGKV-IEHPDI----LYDDIIFRILCPNDKVDNLVATNDG 362
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
I+ LQ G + + + S ERVV I++ E D P Q A + + V++
Sbjct: 363 ILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELFPAQEAVLHIQTHIVDL---- 418
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
G +K + + +LV + + C G S +S+++ T +++++ E + CA ++
Sbjct: 419 ----GPDKDNIITTRLLVPSSEIACFDGREGS-LSDIQRQTSANVQILPKEDLPLCALES 473
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNL 442
D +IQI GE +NAL +V +LR L
Sbjct: 474 DELIQIVGEISAARNALIQVTTKLRSFL 501
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P L DD++ FR++CP V L+ + I+ ++ D + GSD RV+++
Sbjct: 335 PDILYDDII-FRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITS 393
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
D E+ QEAV+ + + ++ D D++ LL
Sbjct: 394 REGPDH--------------ELFPAQEAVLHIQTHIVDLGP------DKDNIITTRLLVP 433
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVA 193
+++I G+ G +++ ++ ++ A + +LP P CA D+LIQI G A + AL+
Sbjct: 434 SSEIACFDGREG-SLSDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQ 492
Query: 194 VTTCLQHLSTMEKS 207
VTT L+ E S
Sbjct: 493 VTTKLRSFLYREMS 506
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 186/448 (41%), Gaps = 69/448 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID---RR 83
FR++CP G ++ +R D+ + F G RVI V + R
Sbjct: 91 FRILCPECKAYGF---PPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-----GDDVAYCG-----L 133
MF S QEA++ V R+ E +A+ + G D G L
Sbjct: 148 PMF------------SPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRL 195
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP----PPACAAIDDQLIQITGATLAVKK 189
+ +G ++GKGG+ + +MR+E+ I +LP P C ++ ++++Q+ G VKK
Sbjct: 196 IVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKK 255
Query: 190 ALVAVTTCLQHLSTMEKSPIC--FNRPIEKV-------------FYSNSSDPHREFFPHL 234
A+ +T L+ ++ P N P ++ Y S + +
Sbjct: 256 AVAIITDRLKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNT 315
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
S+ PP EF S+ +HP + ++ R+L ++
Sbjct: 316 SMEPP--------GYEFDSNDGKV-IEHPDI----LYDDIIFRILCPNDKVDNLVATNDG 362
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
I+ LQ G + + + S ERVV I++ E D P Q A + + V++
Sbjct: 363 ILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELFPAQEAVLHIQTHIVDL---- 418
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN 414
G +K + + +LV + + C G S +S+++ T +++++ E + CA ++
Sbjct: 419 ----GPDKDNIITTRLLVPSSEIACFDGREGS-LSDIQRQTSANVQILPKEDLPLCALES 473
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNL 442
D +IQI GE +NAL +V +LR L
Sbjct: 474 DELIQIVGEISAARNALIQVTTKLRSFL 501
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 25/194 (12%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P L DD++ FR++CP V L+ + I+ ++ D + GSD RV+++
Sbjct: 335 PDILYDDII-FRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITS 393
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
D E+ QEAV+ + + ++ D D++ LL
Sbjct: 394 REGPDH--------------ELFPAQEAVLHIQTHIVDLGP------DKDNIITTRLLVP 433
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVA 193
+++I G+ G +++ ++ ++ A + +LP P CA D+LIQI G A + AL+
Sbjct: 434 SSEIACFDGREG-SLSDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQ 492
Query: 194 VTTCLQHLSTMEKS 207
VTT L+ E S
Sbjct: 493 VTTKLRSFLYREMS 506
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 177/408 (43%), Gaps = 30/408 (7%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTK---CRIHCEGGFP-GSDHRVILVVGSG 78
DVV FRL+ P R ++++ +RR T R+ G+P + RV +V+G
Sbjct: 36 DVVVFRLLLPRAFGDEDAMRLYAVVAPLRRHTAGLHVRVDALEGYPEDAASRVAVVLGPT 95
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
S R + + E ++S QEA++ V + + V + C +L
Sbjct: 96 SPTRPVE-ASSSSSGEPLQLSPAQEALVSVVDVGGVLHRVV---ARAPEFVSCLVLVEAA 151
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDD--QLIQITGATLAVKKALVAVTT 196
+ + G+G + ++ L A ++ ++I+ITG ++KA+VA+++
Sbjct: 152 GLEAL-GRGTLEAIASETNAELRVTSLAEGATPSVHSPKEVIEITGDRTTIRKAIVALSS 210
Query: 197 CLQ---HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
LQ H ++ S P + +S P + L S + +
Sbjct: 211 YLQGDLHACSLTTS---VTTPSPMFPWKSSEVPEPNYGD-------LHSGVSTKCANINV 260
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
D +D G + Q+++ R+L A G+IGK+G I++ + +GA I P
Sbjct: 261 PWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPF 320
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
+ ERV+TISALE +HS VQ+A + +F R EVE F E + +LV
Sbjct: 321 SGCMERVITISALES-PGKHSKVQSAILCIFDRMEEVERNLMFGKPE-----CSARVLVP 374
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
L G G + + EM TG I+++ V CA+ + V+Q S
Sbjct: 375 KSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQAS 422
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 162/354 (45%), Gaps = 66/354 (18%)
Query: 103 EAVIRVFERMWEVEAEV-EGDGDGD-DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGA 160
+A++ VF+R++ E E GD G+ + LL +++G ++GK G + +M +S
Sbjct: 247 KAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDSCC 306
Query: 161 KIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEK- 217
+I + P CA D+L QITG +V+K L V L F P ++
Sbjct: 307 EIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLL------------FTHPPKES 354
Query: 218 -VFYSNSSDP---HREFFPHLSL-----VPPLTGNPSDNASEFHSSSADADRDHPGLDKK 268
V +++S P H FP + VPP
Sbjct: 355 DVLGAHNSGPNVAHLPNFPEALMHGHGSVPP----------------------------- 385
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
+ + R+L S GIIGK G ++S+QN +G I + KS +R+V IS +
Sbjct: 386 ---EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAH 442
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
SP QNA + V + V +S +G A+ ++V + VGCL G G S +
Sbjct: 443 PGDGISPAQNAILHVQRKIVP-------TSNTKEGPAIC-RLIVSPNQVGCLLGKGGSII 494
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+EM ++G I ++ +++ +ND V+QISG + +Q AL ++ RLR++L
Sbjct: 495 AEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHL 548
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 23/185 (12%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
++P + ++FRL+C + VGG+IG+ G+ I SI+ DT C I P S+ R++ + G
Sbjct: 382 SVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPA 441
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
G +S Q A++ V ++ EG A C L+ +
Sbjct: 442 H--------------PGDGISPAQNAILHVQRKIVPTSNTKEGP------AICRLIVSPN 481
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVT 195
++G ++GKGG + MR SGA I++L P +D+++QI+GA+ A+++AL+ +T
Sbjct: 482 QVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQIT 541
Query: 196 TCLQH 200
L++
Sbjct: 542 ARLRN 546
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV 74
FR++CPT G +IG+ G II+ IR++T +I + PG D RVI++
Sbjct: 90 FRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVI 137
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 339 AAVLVFARSV--EVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTG 396
A +LVF R E+E G +SGE + V++ +LV VG L G S + +M +
Sbjct: 248 AILLVFDRIFVNEMENGTGDASGER--NHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDSC 305
Query: 397 TDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL-RHNLKSGEIL 448
+I+ V +++ CA D + QI+GE +V+ L+ V L H K ++L
Sbjct: 306 CEIR-VSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVL 357
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 23/178 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++CP +G +IGR+GSII S++ D +I PGSD R+I++
Sbjct: 24 FRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIII------------ 71
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
N+V+ + +S QEA++ + ++ V+ D D V LL + + G ++GK
Sbjct: 72 SANEVLED--NLSPAQEALLHIQSQI------VDLGPDKDGVITTKLLIPSNQTGCLLGK 123
Query: 147 GGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
GG ++ MR ++ A I +LP P CA D+++QI G A + ALV VT+ L+
Sbjct: 124 GGAIISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRSF 181
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
+E+ R+L +IG+ G+I++SLQ+ GA I + S ER++ ISA E L+
Sbjct: 20 EELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISANEVLED 79
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
SP Q A + + ++ V++ G +K + +L+ ++ GCL G G + +SEM
Sbjct: 80 NLSPAQEALLHIQSQIVDL--------GPDKDGVITTKLLIPSNQTGCLLGKGGAIISEM 131
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
T +I+++ E + CA +D ++QI G+ + + AL +V RLR
Sbjct: 132 RKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLR 179
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 187/446 (41%), Gaps = 58/446 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
SFR++CP S ++ +R D+ + F G RVI V R
Sbjct: 84 TTSFRILCPECKAYSF---SPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGAR--RE 138
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-----GDDVAYCG-----L 133
C S QEA++ V R+ E +A+ + G D G L
Sbjct: 139 ADGCPP-------MFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKTTTRL 191
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP----PPACAAIDDQLIQITGATLAVKK 189
+ +G ++GKGG+ + +MR+E+ I +L P C + ++++Q+ G VKK
Sbjct: 192 IVPKQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKK 251
Query: 190 ALVAVTTCLQHLSTMEKSPIC--FNRPIEKVFYSNSSDPHREFFPHLSLVPPLT---GNP 244
A+ +T L+ ++ P N P ++ + E+ + +P G P
Sbjct: 252 AVAIITDRLKESLHRDRGPFRGRLNSPEPRISQED------EYLGGVQQMPAYVESLGGP 305
Query: 245 S---DNAS-----EFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIV 296
+N S S+ +HP + +++ R+L A ++ R I+
Sbjct: 306 DQIRNNISMEPPGYVFDSNGGKVIEHPDI----LYEDIIFRILCPNDKADSLVATRDGIL 361
Query: 297 RSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
LQ G + + + S ERV+ I++ E D P Q A + + V++
Sbjct: 362 EMLQTDVGVDVRLSDITSDSDERVLIITSREGPDHELFPAQEAVLHIQTHIVDL------ 415
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV 416
G + + + +LV A + C G S +S+++ T +++++ E + CA ++D
Sbjct: 416 --GPDMDNIITTRLLVPASEIACFDGREGS-LSDIQRQTSANVQILPREDLPSCALESDE 472
Query: 417 VIQISGEYKNVQNALSEVVGRLRHNL 442
+IQI GE K +NAL +V +LR L
Sbjct: 473 LIQIVGEIKAARNALIQVTTKLRSFL 498
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 25/192 (13%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P L +D++ FR++CP L+ I+ ++ D + SD RV+++
Sbjct: 332 PDILYEDII-FRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITS 390
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
D E+ QEAV+ + + ++ D D++ LL
Sbjct: 391 REGPDH--------------ELFPAQEAVLHIQTHIVDLGP------DMDNIITTRLLVP 430
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVA 193
++I G+ G +++ ++ ++ A + +LP P+CA D+LIQI G A + AL+
Sbjct: 431 ASEIACFDGREG-SLSDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQ 489
Query: 194 VTTCLQHLSTME 205
VTT L+ E
Sbjct: 490 VTTKLRSFLYRE 501
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTI--SALEYLD---TRHSPVQNAAVLVFARSVE 349
V +++ SGAL++ P RV+ A D SP Q A ++V R +E
Sbjct: 103 FVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGCPPMFSPAQEALLMVHRRILE 162
Query: 350 VEGQQGFSS---GENKGDA-----VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+ G G DA ++V VGCL G G + +M T T I++
Sbjct: 163 TDADDGDEDGEYGPRGKDARDRGKTTTRLIVPKQHVGCLLGKGGKIIEQMRMETKTHIRI 222
Query: 402 VG-GEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRV 460
+ G+ C + ++ V+Q+ G+ V+ A++ + RL+ +L R SP R+
Sbjct: 223 LSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIITDRLKESLHRDRGPFRGRLNSPEPRI 282
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 8/176 (4%)
Query: 268 KGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALE 327
+G +E ++R++ G+IGK GAI+ ++ SGA I + T+ + ++ IS E
Sbjct: 8 EGSMREFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKE 67
Query: 328 YLDTRHSPVQNAAVLVFAR-SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
+ D SP AAV + R S +VE G S +LV + +GCL G G +
Sbjct: 68 FFDDSFSPTIEAAVRLQPRCSDKVERDSGIVS-------FTTRLLVPSSRIGCLIGKGGT 120
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
++EM +T +I+++ E + A+++D ++QISG+ ++AL +V+ RL+ NL
Sbjct: 121 IITEMRRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANL 176
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R+VCPT +GG+IG+ G+II+ IR+D+ I + D +I +I +
Sbjct: 15 SVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLI------AISTKEF 68
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
F ++ S T EA +R+ R + +VE D G LL +++IG ++G
Sbjct: 69 FDDS--------FSPTIEAAVRLQPRCSD---KVERD-SGIVSFTTRLLVPSSRIGCLIG 116
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
KGG +T MR + A I +LP P A+ DD+++QI+G K ALV V T L+
Sbjct: 117 KGGTIITEMRRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLK 173
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 28/281 (9%)
Query: 168 PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEK--VFYSNSSD 225
P CA D+L QITG +V+K L V L F P ++ V +++S
Sbjct: 17 PLCALPRDELCQITGELDSVRKGLNTVAQLL------------FTHPPKESDVLGAHNSG 64
Query: 226 PHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGR----KQEVALRMLFS 281
R FF ++PP G + F + + P G + + R+L S
Sbjct: 65 SSRSFFNQPDVLPP--GMQPNLHLPFQGPNVAHLPNFPEALMHGHGSVPPEPLTFRLLCS 122
Query: 282 GWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAV 341
GIIGK G ++S+QN +G I + KS +R+V IS + SP QNA +
Sbjct: 123 SDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAIL 182
Query: 342 LVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
V + V +S +G A+ ++V + VGCL G G S ++EM ++G I +
Sbjct: 183 HVQRKIVP-------TSNTKEGPAIC-RLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIV 234
Query: 402 VGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ +++ +ND V+QISG + +Q AL ++ RLR++L
Sbjct: 235 LSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHL 275
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 97/185 (52%), Gaps = 23/185 (12%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
++P + ++FRL+C + VGG+IG+ G+ I SI+ DT C I P S+ R++ + G
Sbjct: 109 SVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPA 168
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
G +S Q A++ V ++ EG A C L+ +
Sbjct: 169 H--------------PGDGISPAQNAILHVQRKIVPTSNTKEGP------AICRLIVSPN 208
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVT 195
++G ++GKGG + MR SGA I++L P +D+++QI+GA+ A+++AL+ +T
Sbjct: 209 QVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQIT 268
Query: 196 TCLQH 200
L++
Sbjct: 269 ARLRN 273
>gi|222636947|gb|EEE67079.1| hypothetical protein OsJ_24052 [Oryza sativa Japonica Group]
Length = 544
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 142/293 (48%), Gaps = 40/293 (13%)
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
RV +V+G S RR+ + E E+S QEA++ + + W V + G+ G +
Sbjct: 47 RVAVVLGPASPARRVEASSSSG--EPLELSPAQEALVALLDSGWVVH--LNGEAWGAERM 102
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP------------PPACAAIDDQL 177
C +L ++ GKG + + ESGA++ + P PP +++
Sbjct: 103 TCLVLVEAGRLEAASGKG--ILWTIANESGAEVRVTPWGGEGGAAYAAQPP------EEV 154
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP-HREFFPHLSL 236
++ITG V++ALV+V++CLQ + P+ ++S +P + FP +
Sbjct: 155 VEITGDGTTVRRALVSVSSCLQG-----------DGPLGSSTSAHSVNPILTQTFPKVP- 202
Query: 237 VPPLTGNPSDNASEFHSSSA---DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRG 293
P + SD ++E ++S D + G+++ + + R+L A G+IGK G
Sbjct: 203 EPEMGSLYSDMSTERANTSIPHIDCPQGATGIEQTECVMQFSFRLLCPVTLAGGLIGKNG 262
Query: 294 AIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR 346
++++++ SGA + P+ + ER +T+SALE + S V+NA + +F R
Sbjct: 263 MVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDR 315
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
SFRL+CP + GGLIG++G +I +I ++ + G R I V ++
Sbjct: 244 SFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFS 303
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERM 112
EN AV+R+F+RM
Sbjct: 304 MVEN--------------AVLRIFDRM 316
>gi|125558153|gb|EAZ03689.1| hypothetical protein OsI_25823 [Oryza sativa Indica Group]
Length = 610
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 142/293 (48%), Gaps = 40/293 (13%)
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
RV +V+G S RR+ + E E+S QEA++ + + W V + G+ G +
Sbjct: 113 RVAVVLGPASPARRVEASSSSG--EPLELSPAQEALVALLDSGWVVH--LNGEAWGAERM 168
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP------------PPACAAIDDQL 177
C +L ++ GKG + + ESGA++ + P PP +++
Sbjct: 169 TCLVLVEAGRLEAASGKG--ILWTIANESGAEVRVTPWGGEGGAAYAAQPP------EEV 220
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP-HREFFPHLSL 236
++ITG V++ALV+V++CLQ + P+ ++S +P + FP +
Sbjct: 221 VEITGDGTTVRRALVSVSSCLQG-----------DGPLGSSTSAHSVNPILTQTFPKVP- 268
Query: 237 VPPLTGNPSDNASEFHSSSA---DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRG 293
P + SD ++E ++S D + G+++ + + R+L A G+IGK G
Sbjct: 269 EPEMGSLYSDMSTERANTSIPHIDCPQGATGIEQTECVMQFSFRLLCPVTLAGGLIGKNG 328
Query: 294 AIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR 346
++++++ SGA + P+ + ER +T+SALE + S V+NA + +F R
Sbjct: 329 MVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFSMVENAVLRIFDR 381
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 14/87 (16%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
SFRL+CP + GGLIG++G +I +I ++ + G R I V ++
Sbjct: 310 SFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITVSALEKPGQKFS 369
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERM 112
EN AV+R+F+RM
Sbjct: 370 MVEN--------------AVLRIFDRM 382
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 55/331 (16%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI---HCEGGFPGSDHRVILVVGSGS 79
D V +L+ P G +IG+ G +I+ ++ D+K RI H FPG+ RVI++ GS +
Sbjct: 20 DKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIA 79
Query: 80 IDRRI-MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
R++ F V EG + Q V+ D + ++
Sbjct: 80 GVRQVNRFILEKVSEEGKADKAIQYGVL-----------------DKNRNRQLKMIVPNA 122
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL-VAVTTC 197
GV++GKGG N+ ++ +SGA + + A AID++++ +TG A + + C
Sbjct: 123 AAGVIIGKGGSNIKEIQDKSGAHVQVSQKKAQYAIDERILTVTGEFNERLTAWELIIWKC 182
Query: 198 LQHLSTMEKSPICFNR--------PIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNAS 249
L+ ++ + + + ++ + +Y + R + P T S
Sbjct: 183 LEDINNLPNTSVSYSHVEPAGTLPALHSNYYGGGNANDRPMDSSAASYDPYT-------S 235
Query: 250 EFHSSS-----ADADRD-----HPGLDKKGRKQ---EVALRMLFSGWTASGIIGKRGAIV 296
E +S + A ADR +P + R E +++ I+GKRG ++
Sbjct: 236 ERYSPTQVTQDAQADRQYGMQSYPPTARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVI 295
Query: 297 RSLQNASGALISFAA-----PLTKSGERVVT 322
+QN SGA I + P TK E VT
Sbjct: 296 SDIQNISGAHIQVSQRGDYIPGTKDREVTVT 326
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 53/331 (16%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
+S+++ P P D V FRL+ P VG +IGR G +I + +T+ RI G G+ R
Sbjct: 66 ASEKKWP-GWPGDCV-FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDR 123
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD---GDD 127
++L+ G + +S +AVIRVF+R+ + +E EGDG
Sbjct: 124 IVLISGREEPE--------------APLSPAMDAVIRVFKRVTGL-SESEGDGKAYGAAG 168
Query: 128 VAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITG 182
VA+C LL +T+ ++GK G + ++ +GA + +L P AA D++++++ G
Sbjct: 169 VAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQG 228
Query: 183 ATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV--PPL 240
L V+KAL AV L+ F R S D + + SL+
Sbjct: 229 EALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATI---SQDRQSDTWADKSLLHGTSQ 285
Query: 241 TGNPSDNASEFHSSSADADR----DHPGLDKKGRKQ-------------------EVALR 277
TG SD + S DR +H GL G++ ++A
Sbjct: 286 TGMGSDYSLPAKRESLYLDRETQMEHSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQT 345
Query: 278 MLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
M A IIG GA + ++ SGA+++
Sbjct: 346 MQIPLSYAEDIIGIGGANIAYIRRTSGAILT 376
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 29/254 (11%)
Query: 214 PIEKVFYSNSSDPHREFFPHLSLVPPLTGN---------PSDNASEFHSSSADADRDHPG 264
P+ S SDP E LS P N PS+N ++ + + P
Sbjct: 11 PVNGAAQSPGSDPKTE----LSETPLSASNAATAESEQAPSENLESESTAPPETEAPAPA 66
Query: 265 LDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
+KK G + R++ IIG++G +++ + + A I + +R+V
Sbjct: 67 SEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVL 126
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV--------AVSILVGA 374
IS E + SP +A + VF R G S E G A ++ +LV +
Sbjct: 127 ISGREEPEAPLSPAMDAVIRVFKRVT------GLSESEGDGKAYGAAGVAFCSIRLLVAS 180
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
L G S + +++ TG ++++ G++V AA ++ ++++ GE VQ AL V
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAV 240
Query: 435 VGRLRHNLKSGEIL 448
VG LR L +L
Sbjct: 241 VGHLRKFLVDHSVL 254
>gi|242048332|ref|XP_002461912.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
gi|241925289|gb|EER98433.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
Length = 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 154/334 (46%), Gaps = 35/334 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKC-RIHCEGGFPGSD--HRVILVVGSGSIDRR 83
FRL+ P R + ++ +RR T ++ E P S V V+G + RR
Sbjct: 35 FRLLLPPSFSDADTMRLYAAVNPLRRRTAALQVRVEPLDPASAGGRVVAAVLGPTAPVRR 94
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEV----EAEVEGDGDGDDVAYCGLLANTTK 139
+ + E +S QEA++ V + + E E G V C LL + +
Sbjct: 95 VEASSSSA--EPLALSPAQEALVAVIDTQGALYCAGEEEARGKAPPGRVT-CLLLVDADR 151
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVM-------LPPPACAAIDDQLIQITGATLAVKKALV 192
+ G+G + R+ +E+GA + + LPP +++++ITG AV+KALV
Sbjct: 152 LEASAGRG--VMERIALEAGADVRVAMWEEGALPPRGQPP--EEVVEITGDRTAVRKALV 207
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
A+++CLQ + S + + +++S P P + + S+ ++EF
Sbjct: 208 ALSSCLQGDLPIGNSTAYDKKEGSILPWASSEVPG----------PNMGTSCSEVSTEFA 257
Query: 253 SSS---ADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
S + G + Q+V+ R+L + A G+IGKRG I++ +++ +GA I
Sbjct: 258 QGSVAKTHCPEGNTGYVQSKTLQQVSFRLLLPTYLAGGLIGKRGLIIKGIEDETGACIDV 317
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
AP+T ERV+TI ALE + ++NA LV
Sbjct: 318 GAPVTGCKERVITICALE-ITGEQVNIRNALSLV 350
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 28/283 (9%)
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSD----PHREF 230
D + I G + AVKKAL A++ + + E+ P+ P SD P F
Sbjct: 4 DNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGF 63
Query: 231 FPHLSL------VPPL---TGNPS-DNASEFHSSSADADRDHPGLDKKG--RKQEVALRM 278
+P VPP+ T P S+ S+ + P + G R +E+ +R+
Sbjct: 64 YPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRV 123
Query: 279 LFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQN 338
L +IG+ G+ ++S++ ASGA + E ++T+++ E +D S
Sbjct: 124 LCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVE 183
Query: 339 AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTD 398
A +L+ A+ + D VA+ +LV + +GC+ G S ++E+ T D
Sbjct: 184 AVLLLQAK-----------INDEDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRAD 232
Query: 399 IKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+++ E+ CA ND +I++ GE +V++AL ++V RLR +
Sbjct: 233 VRISKSERP-KCADANDELIEVVGEVGSVRDALVQIVLRLRDD 274
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++CP +G +IGR GS I S+R + + + D +I V + S+D
Sbjct: 121 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDL--- 177
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
S EAV+ + ++ D D D VA LL + IG ++GK
Sbjct: 178 -----------KSMAVEAVLLLQAKI--------NDEDDDTVA-IRLLVPSKIIGCIIGK 217
Query: 147 GGR--NVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G N R R + +I P CA +D+LI++ G +V+ ALV + L+
Sbjct: 218 SGSIINEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLR 272
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 18/94 (19%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
DD V+ RL+ P+ ++G +IG+SGSII+ IR+ T+ + +
Sbjct: 197 DDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKS-----------------E 239
Query: 82 RRIMFCENDVVVE-GGEVSSTQEAVIRVFERMWE 114
R ND ++E GEV S ++A++++ R+ +
Sbjct: 240 RPKCADANDELIEVVGEVGSVRDALVQIVLRLRD 273
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 8/171 (4%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
+E +LRM+ +IGK G I+ ++ SGA I + ++ + ++TISA E D
Sbjct: 29 KEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISAKEICDD 88
Query: 332 RHSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
++SP AA+ + R E +E G S +LV + +GCL G G + E
Sbjct: 89 QYSPTIEAALRLQPRCSEKMERDSGLFS-------FTTRLLVPSSHIGCLLGKGGLIIDE 141
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
M +T I++ +++ A +D ++QISG+ ++AL ++ RLR N
Sbjct: 142 MRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRAN 192
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 37/186 (19%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S R+VCPT +G +IG+ G+II+ IR+++ I + D +I +
Sbjct: 31 FSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLITISAK------- 83
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK----- 139
C++ + S T EA +R+ R E ++E D GL + TT+
Sbjct: 84 EICDD-------QYSPTIEAALRLQPRCSE---KMERDS--------GLFSFTTRLLVPS 125
Query: 140 --IGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALVA 193
IG ++GKGG + MR + A I+ +P P A DD+++QI+G K AL+
Sbjct: 126 SHIGCLLGKGGLIIDEMRKLTKA-IIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQ 184
Query: 194 VTTCLQ 199
++ L+
Sbjct: 185 ISRRLR 190
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%), Gaps = 3/187 (1%)
Query: 264 GLDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
G +KK G E RML GIIG++G V+ + + + I L+ + ERVV
Sbjct: 38 GAEKKWPGWPGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVV 97
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
+SA E D SP + + V R +E + G + G + +L G G L
Sbjct: 98 MVSAKEEPDATISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTITRLLLAGIQ-SGSLI 156
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
G + + +++ +G K+VG E + CA +D V++I GE NV AL VV LR
Sbjct: 157 GKQGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKF 216
Query: 442 LKSGEIL 448
L +L
Sbjct: 217 LVDRSVL 223
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 135/352 (38%), Gaps = 90/352 (25%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P+ VGG+IGR G + + +T+ RI G G+ RV++V D I
Sbjct: 52 FRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDATI-- 109
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV---EGDGDGDDVAYCGLLANTTKIGVV 143
S + +++V +R+ E EV + G + LL + G +
Sbjct: 110 ------------SPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTITR--LLLAGIQSGSL 155
Query: 144 VGKGGRNVTRMRIESG--AKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
+GK G + ++ SG AK+V P CA DD++++I G V KAL V + L+
Sbjct: 156 IGKQGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRK 215
Query: 201 L-------------------STMEKS----PICFNR----PIEKVFYSNSSD------PH 227
S ME++ P N+ P + N+S PH
Sbjct: 216 FLVDRSVLPMYEMNMSKTNQSQMEQNLSHQPWSHNQTSSLPNSGSGFGNNSKYTPTAPPH 275
Query: 228 REFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRK---------------- 271
++ PSD E HS H GL+ GR
Sbjct: 276 DNYY-----------APSDLPPETHS--------HHGLNMYGRDPLGGHSVPNAAPAPVI 316
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
+V+ RM A +IG GA + + SGA+I+ GE V I
Sbjct: 317 TQVSQRMQIPLSYADAVIGTNGANISYCRRNSGAIITIEETRGVPGEMTVEI 368
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 131/292 (44%), Gaps = 41/292 (14%)
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPI---CFNRPIEKV------------F 219
D +QITG AV+KAL AV+T + + E P+ + P + F
Sbjct: 4 DNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNF 63
Query: 220 YSNSSDPHREFFPHLSL------VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQ- 272
YS S P LS+ VP LT +++ HS P + +
Sbjct: 64 YSPSDAAISSGHPSLSILGSTPHVPELT-----VSADAHSRLPIYQSVLPVIPAYNTPKC 118
Query: 273 --EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLD 330
E+ LR+L +IGK G ++S++ SGA I E ++TI++ E D
Sbjct: 119 SGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATD 178
Query: 331 TRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
S A +L+ Q + +N+G + + +LV +GCL G G S V++
Sbjct: 179 DAKSAAVEAVLLL----------QSKINDDNEG-KMNLRLLVPGKVIGCLIGKGGSIVND 227
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
M T I + GE+ A+ +D ++++ GE +N+++AL ++V RLR ++
Sbjct: 228 MRSKTKAAIYISKGEKPRK-ASSSDELVEVFGEVENLRDALVQIVLRLRDDV 278
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++CP +G +IG+ G I SIR+++ RI + + +I + +
Sbjct: 124 LRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN--------- 174
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+T +A E + +++++ D +G LL IG ++GK
Sbjct: 175 ------------EATDDAKSAAVEAVLLLQSKINDDNEGK--MNLRLLVPGKVIGCLIGK 220
Query: 147 GGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
GG V MR ++ A I + P A+ D+L+++ G ++ ALV + L+
Sbjct: 221 GGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLR 275
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 20/180 (11%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FRL+ P VG +IGR G +I +TK RI G G+ R++L+ G ++
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLE----- 102
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG--LLANTTKIGVVV 144
+S +AVIRVF+R+ +E++ VA+C LL +T+ ++
Sbjct: 103 ---------APLSPAMDAVIRVFKRVSGF-SEIDAKNKASAVAFCSVRLLVASTQAINLI 152
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
GK G + ++ +GA + +L P AA D++++++ G + V KAL AV L+
Sbjct: 153 GKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKF 212
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 242 GNPSDN--ASEFHSSSADADRDHPGLDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVR 297
G SDN A+E S++AD +K+ G R++ IIG++G +++
Sbjct: 10 GVSSDNPAAAEPPSTTADVPPPDAAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIK 69
Query: 298 SLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFS 357
+ A I + +R+V IS E L+ SP +A + VF R GFS
Sbjct: 70 KTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSPAMDAVIRVFKRV------SGFS 123
Query: 358 S--GENKGDAVA---VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
+NK AVA V +LV + L G S + +++ TG ++++ G++V AA
Sbjct: 124 EIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAA 183
Query: 413 QNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
++ ++++ GE V AL VVG LR L +L
Sbjct: 184 ADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVL 219
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 49/326 (15%)
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHL---------STMEKSPICFNRPIEKVFYSNSSD 225
D + ITG + +VK+AL AV++ + +T+ ++P P E +Y
Sbjct: 4 DNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSEVPYY----- 58
Query: 226 PHREFFPHLSLVPPLTGNPS----DNASEFHSSSADADRDHP-----------GLDKKGR 270
PH +P + P P N + AD P G+D +
Sbjct: 59 PHGGLYPSSDPIIPPRAVPQIMGGTNIQDVQGY-ADIGNTWPLYSSALPVVSGGVDAS-Q 116
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLD 330
+E+ +RML +IG+ G+ ++S++ ASG I E ++ I+ E
Sbjct: 117 SEELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPS 176
Query: 331 TRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
S A +L+ QG S E+ + V++ +LV + +GC+ G S ++E
Sbjct: 177 DLKSMAVEAVLLI----------QGKISDEDDTE-VSIQLLVPSKVIGCIIGKSGSIINE 225
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
+ T DI++ G++ CA ND ++++ G V++AL +++ RLR + +L E
Sbjct: 226 IRKRTRADIRISKGDKP-KCADVNDELVEVGGAIDCVRDALIQIILRLRDD-----VLRE 279
Query: 451 ARPRSPSGRVGGPALHKLHQSVALSP 476
R + +GG +L+ + +L P
Sbjct: 280 -RDTGHNPTIGGESLYSGGAAYSLPP 304
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 84/176 (47%), Gaps = 27/176 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS-IDRRIM 85
R++CP+ +G +IGR GS I S+R+ + RI + D +I++ + S D + M
Sbjct: 122 IRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLKSM 181
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
E ++++ G++S D D +V+ LL + IG ++G
Sbjct: 182 AVEAVLLIQ-GKIS----------------------DEDDTEVS-IQLLVPSKVIGCIIG 217
Query: 146 KGGR--NVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
K G N R R + +I P CA ++D+L+++ GA V+ AL+ + L+
Sbjct: 218 KSGSIINEIRKRTRADIRISKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLR 273
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D VS +L+ P+ V+G +IG+SGSII+ IR+ T+ I G D
Sbjct: 198 DTEVSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADIRISKG-----------------D 240
Query: 82 RRIMFCENDVVVE-GGEVSSTQEAVIRVFERM 112
+ ND +VE GG + ++A+I++ R+
Sbjct: 241 KPKCADVNDELVEVGGAIDCVRDALIQIILRL 272
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 135/342 (39%), Gaps = 56/342 (16%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
P D V FRL+ P VGG+IGR G + + +T+ RI G PG+ R+++V
Sbjct: 6 WPGDNV-FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSARED 64
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD---GDDVAYCGLLAN 136
+ +S E ++RV R+ E D + G LL
Sbjct: 65 PE--------------AAISPAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVA 110
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALV 192
T+ G ++G+ G + ++ SGA + +LP P CA DD+++++TG V++A
Sbjct: 111 ATQAGSLIGRQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATE 170
Query: 193 AVTTCLQHLSTMEKS--PIC-FNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNAS 249
V L+ +++S P+ NR + SN ++ S N S N S
Sbjct: 171 LVVAHLRKF-LVDRSVLPLFELNRAVAN--QSNQQSTASQWQQPSSTQQQQPPNYSSNDS 227
Query: 250 EFHSS------------SADADRDHPGLDKKGRK----------------QEVALRMLFS 281
++ + S D H GL GR +V M
Sbjct: 228 SYYGAAELPHHSQPQQQSHDLANHHHGLSLYGRDPTLGGTIVPPTPAPVITQVTQHMQIP 287
Query: 282 GWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
A IIG GA + ++ SGA I+ + GE V I
Sbjct: 288 LSYADAIIGGAGANISYMRRTSGATITIQETRSVPGEMTVEI 329
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ GIIG++G V+ + + + I + + ER+V +SA E + SP
Sbjct: 12 FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 71
Query: 336 VQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
+ V R +E E + + G V+ +LV A G L G + + ++D
Sbjct: 72 AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS 131
Query: 395 TGTDIKLV-GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+G ++++ E++ CA +D V++++GE +NVQ A VV LR L +L
Sbjct: 132 SGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRSVL 186
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 140/351 (39%), Gaps = 70/351 (19%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
P D V FRL+ PT +VGG+IGR G + + +T+ RI G G+ R ++V
Sbjct: 81 WPGDNV-FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEE 139
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-------GDDVAYCG 132
+ VS + ++RV +R+ +E +G G+ G
Sbjct: 140 PE--------------APVSPAMDGILRVHKRI--IEGGPDGRGELGRAQQGGSGTISTR 183
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKK 189
LL T+ G ++G+ G + ++ SGA + +L P CA DD+L+++ G +V K
Sbjct: 184 LLVAGTQAGSLIGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHK 243
Query: 190 ALVAVTTCLQH-------LSTMEKSPICFNRP-IEKVFYSNSSDPHREFFPHLSLVPPLT 241
A+ + + L+ L E N+P IE+ PH+ + + S P +
Sbjct: 244 AVELIVSHLRKFLVDRSVLPLFEADRTIGNQPQIEENL------PHQSWGHNQSSSVPSS 297
Query: 242 GNPSDNASEFHSSSADADRDHP------------GLDKKGRK-----------------Q 272
G +++ SS+ D +P GL GR
Sbjct: 298 GGAGLGNTQYMSSAFQHDNYYPPSDLPLESQGHHGLSVYGRDPSLAGHSVANPPPAPVIT 357
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
+V M A IIG GA + ++ SGA I+ GE V I
Sbjct: 358 QVTQHMQIPLSYADAIIGTAGANISYMRRNSGATIAVQETRGVPGEMTVEI 408
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 266 DKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
DKK G + R+L GIIG++G V+ + + + I L + ER V +
Sbjct: 75 DKKWPGWPGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMV 134
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVE--VEGQQGFSSGENKGDA-VAVSILVGADFVGCL 380
SA E + SP + + V R +E +G+ + G ++ +LV G L
Sbjct: 135 SAKEEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSL 194
Query: 381 TGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRH 440
G + + +++ +G ++++ E + CA +D ++++ GE +V A+ +V LR
Sbjct: 195 IGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRK 254
Query: 441 NLKSGEIL 448
L +L
Sbjct: 255 FLVDRSVL 262
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 15/223 (6%)
Query: 235 SLVPPLTGNPSDN-ASEFHSSSADADRDHPGLDKK---GRKQEVALRMLFSGWTASGIIG 290
+L P G SDN A+E S+ A+ P +K G R++ IIG
Sbjct: 3 TLDPIQNGVSSDNPAAEPSSTPAEDPTPDPAAAEKRWPGWPGHCVFRLIVPVLKVGSIIG 62
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEV 350
++G +++ + A I + +R+V IS E + SP NA + VF R
Sbjct: 63 RKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSPAMNAVIRVFKRV--- 119
Query: 351 EGQQGFSS--GENKGDAVA---VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGE 405
GFS ENK AVA V +LV + L G S + +++ TG ++++ G+
Sbjct: 120 ---SGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGD 176
Query: 406 QVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+V AA ++ ++++ GE V AL VVG LR L +L
Sbjct: 177 EVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVL 219
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FRL+ P VG +IGR G +I +TK RI G G+ R++L+ G +
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPE----- 102
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG--LLANTTKIGVVV 144
+S AVIRVF+R+ +E++ + VA+C LL +T+ ++
Sbjct: 103 ---------APLSPAMNAVIRVFKRVSGF-SEIDAENKASAVAFCSVRLLVASTQAINLI 152
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
GK G + ++ +GA + +L P AA D++++++ G + V KAL AV L+
Sbjct: 153 GKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKF 212
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
P D V FRLV P VGG+IGR G + + +T+ RI G PG+ R+++V
Sbjct: 9 WPGDNV-FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSARED 67
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE------VEAEVEGDGDGDDVAYCGL 133
+ +S E ++RV R+ E V+AE+ G L
Sbjct: 68 PE--------------AAISPAMEGLLRVHRRVIEGAEPESVDAEI---APGGAPVSSRL 110
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKA 190
L T+ G ++G+ G + ++ SGA + +LP P CA DD+++++ G V++A
Sbjct: 111 LVAATQAGSLIGRQGATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRA 170
Query: 191 LVAVTTCLQHL 201
+ V + L+
Sbjct: 171 MELVVSHLRKF 181
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ GIIG++G V+ + + + I + + ER+V +SA E + SP
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 74
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDA-VAVSILVGADFVGCLTGSGSSAVSEMEDV 394
+ V R +E + + G A V+ +LV A G L G + + ++D
Sbjct: 75 AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT 134
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+G +++++ E++ CA +D V+++ G+ +NVQ A+ VV LR L +L
Sbjct: 135 SGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDRSVL 188
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S KRR + V FR+V P+ +G +IG+ GS I IR +TK I + R
Sbjct: 50 SPKRRAK----NQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEER 105
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
VI++ S EN +S + A+++V + + E + + D V
Sbjct: 106 VIIISSKDS--------EN-------VISDAENALLQVASLILK---EDDSNTDALKVGV 147
Query: 131 CGLLANTTKI-------GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLI 178
++AN ++ G ++G G+N+ ++R SGA I +LP P CA+ D+++
Sbjct: 148 GHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMV 207
Query: 179 QITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVP 238
QI+G AV KAL + L+ +P R+ +
Sbjct: 208 QISGDVPAVLKALEEIGCQLRE------------------------NPPRQVIS----IS 239
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
P+ ++ S+ + A AD V L M+ G+IG+ G+ +
Sbjct: 240 PIYNPNTNRTSQQYLDPASADY-------------VTLNMMIPETLVGGLIGRCGSNISR 286
Query: 299 LQNASGALISF 309
++N SGA+I
Sbjct: 287 IRNESGAMIKV 297
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
D+ S++ + DH ++ + Q+V R++ +IGK G+ ++ ++ + A
Sbjct: 32 DDGGVIASATGEVADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKA 91
Query: 306 LISFAAPLTKSGERVVTISALE----YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
I A + + ERV+ IS+ + D ++ +Q A++++ + G
Sbjct: 92 TIKIADAIARHEERVIIISSKDSENVISDAENALLQVASLILKEDDSNTD---ALKVGVG 148
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV--VIQ 419
A A+ +L+ GCL G + ++ + +G I ++ Q+ CA+ +D ++Q
Sbjct: 149 HVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQ 208
Query: 420 ISGEYKNVQNALSEVVGRLRHN 441
ISG+ V AL E+ +LR N
Sbjct: 209 ISGDVPAVLKALEEIGCQLREN 230
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
D V+ ++ P +VGGLIGR GS IS IR ++ I GG +HR I GS
Sbjct: 260 DYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSA 315
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 75/311 (24%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S KRR + V FR+V P+ +G +IG+ GS I IR +TK I + R
Sbjct: 50 SPKRRAK----NQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEER 105
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
VI++ S EN +S + A+++V + + E + + D V
Sbjct: 106 VIIISSKDS--------EN-------VISDAENALLQVASLILK---EDDSNTDALKVGV 147
Query: 131 CGLLANTTKI-------GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLI 178
++AN ++ G ++G G+N+ ++R SGA I +LP P CA+ D+++
Sbjct: 148 GHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMV 207
Query: 179 QITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVP 238
QI+G AV KAL + L+ +P R+ +
Sbjct: 208 QISGDVPAVLKALEEIGCQLRE------------------------NPPRQVIS----IS 239
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
P+ ++ S+ + A AD V L M+ G+IG+ G+ +
Sbjct: 240 PIYNPNTNRTSQQYLDPASADY-------------VTLNMMIPETLVGGLIGRCGSNISR 286
Query: 299 LQNASGALISF 309
++N SGA+I
Sbjct: 287 IRNESGAMIKV 297
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
D+ S++ + DH ++ + Q+V R++ +IGK G+ ++ ++ + A
Sbjct: 32 DDGGVIASATGEVADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKA 91
Query: 306 LISFAAPLTKSGERVVTISALE----YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
I A + + ERV+ IS+ + D ++ +Q A++++ + G
Sbjct: 92 TIKIADAIARHEERVIIISSKDSENVISDAENALLQVASLILKEDDSNTD---ALKVGVG 148
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV--VIQ 419
A A+ +L+ GCL G + ++ + +G I ++ Q+ CA+ +D ++Q
Sbjct: 149 HVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQ 208
Query: 420 ISGEYKNVQNALSEVVGRLRHN 441
ISG+ V AL E+ +LR N
Sbjct: 209 ISGDVPAVLKALEEIGCQLREN 230
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
D V+ ++ P +VGGLIGR GS IS IR ++ I GG +HR I GS
Sbjct: 260 DYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSA 315
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 9/172 (5%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
+E +LR++ +IGK G I+ ++ SGA I + + + + ++TISA E D
Sbjct: 29 KEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYD- 87
Query: 332 RHSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
+SP AAV + R E +E G S +LV + +GCL G G + + E
Sbjct: 88 HYSPTIEAAVRLQPRCSEKMERDSGLIS-------FTTRLLVPSSRIGCLLGKGGAIIDE 140
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
M +T I++ E + A+ +D ++QI+G+ ++AL ++ RLR N+
Sbjct: 141 MRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANV 192
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 24/178 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R+VCPT +G +IG+ G+II+ IR+++ I + D +I + D
Sbjct: 32 SLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYD---- 87
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
S T EA +R+ R E ++E D G LL +++IG ++G
Sbjct: 88 -----------HYSPTIEAAVRLQPRCSE---KMERD-SGLISFTTRLLVPSSRIGCLLG 132
Query: 146 KGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
KGG + MR + A I+ +P P A+ DD+++QI G K AL+ ++ L+
Sbjct: 133 KGGAIIDEMRKLTKA-IIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLR 189
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 45/227 (19%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ P S ++ P P D V FRL+ P VG +IGR G +I + +T+ RI
Sbjct: 65 NHTGP----SDKKWP-GWPGDCV-FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLD 118
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
G G+ RV+L+ G ++ +S +AVIRVF+R V G
Sbjct: 119 GAVGTPDRVVLISGKEELE--------------SPLSPAMDAVIRVFKR-------VSGL 157
Query: 123 GDGDDVA---YCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAID 174
+ +D A +C LL +T+ ++GK G + ++ +GA + +L P A D
Sbjct: 158 SENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGAD 217
Query: 175 DQLIQITGATLAVKKALVAVTTCLQH-------LSTMEKSPICFNRP 214
++++++ G +L V KAL V L+ L EKS FN P
Sbjct: 218 ERMVELQGESLKVLKALEGVVGHLRKFLVDHSVLPLFEKS---FNTP 261
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 244 PSDNAS-EFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA 302
PSD+A+ E + + +D+ PG + R++ IIG++G +++ +
Sbjct: 55 PSDSAAHEPSNHTGPSDKKWPGWPG-----DCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 109
Query: 303 SGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
+ A I + +RVV IS E L++ SP +A + VF R G S E++
Sbjct: 110 TRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRV------SGLSENEDE 163
Query: 363 GDA--VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQI 420
A ++ +LV + L G S + +++ TG ++++ G+++ A ++ ++++
Sbjct: 164 AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVEL 223
Query: 421 SGEYKNVQNALSEVVGRLRHNLKSGEIL 448
GE V AL VVG LR L +L
Sbjct: 224 QGESLKVLKALEGVVGHLRKFLVDHSVL 251
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
D++V++R++CP V+G +IG++G +I+SIR++T+ ++ FPG + RVI + +
Sbjct: 36 DELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIY--CYVK 93
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVAYCGLLANTTKI 140
++ +D + + Q+A++RV + V + ++ D D C +L +++
Sbjct: 94 KKEDVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEECRILVPSSQS 153
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPA------CAAIDDQLI 178
++GK G + ++R ++ A I + P A CA D I
Sbjct: 154 ANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDNFI 197
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 138/319 (43%), Gaps = 51/319 (15%)
Query: 123 GDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG 182
G+ D++ +L IG V+GK G+ + +R E+ AK+ ++ P +D++I I
Sbjct: 33 GNNDELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDP--FPGPNDRVITI-- 88
Query: 183 ATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG 242
C+ + E V + H+ F
Sbjct: 89 --------------------------YCYVKKKEDVELDDEFHDHQPFCA---------- 112
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA 302
D HS+ ++A D+K + +E R+L ++ IIGK G ++ L++
Sbjct: 113 -AQDALLRVHSAISNAVSSVLDSDRKMKDKE-ECRILVPSSQSANIIGKAGTTIKKLRSK 170
Query: 303 SGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
+ A I K A+++ + SP ++ V A + QG + E+
Sbjct: 171 TRATIKVTP---KDASDPTHSCAMDFDNFIMSPDDLKSMAVEA----ILLLQGKINDEDD 223
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
D V++ +LV +GC+ G S ++E+ T DI++ G++ CA +D ++++ G
Sbjct: 224 -DTVSIRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRISKGQKP-KCADSSDELVEVLG 281
Query: 423 EYKNVQNALSEVVGRLRHN 441
E +V++AL ++V RLR +
Sbjct: 282 EVGSVRDALVQIVLRLRDD 300
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 17/102 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
DD VS RL+ P V+G +IG+SGSII+ IRR TK I G
Sbjct: 223 DDTVSIRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRISKGQKP--------------- 267
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
+ +++V GEV S ++A++++ R+ + +A E DG
Sbjct: 268 -KCADSSDELVEVLGEVGSVRDALVQIVLRLRD-DALKEKDG 307
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 123/324 (37%), Gaps = 53/324 (16%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFC 87
R++ P+ +IG++G+ I +R T+ I +V S M
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATI-----------KVTPKDASDPTHSCAMDF 193
Query: 88 ENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKG 147
+N ++ S EA++ + ++ + + DD LL IG ++GK
Sbjct: 194 DNFIMSPDDLKSMAVEAILLLQGKIND---------EDDDTVSIRLLVPCKVIGCIIGKS 244
Query: 148 GR--NVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
G N R R ++ +I P CA D+L+++ G +V+ ALV + L+ + E
Sbjct: 245 GSIINEIRRRTKADIRISKGQKPKCADSSDELVEVLGEVGSVRDALVQIVLRLRDDALKE 304
Query: 206 K----SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRD 261
K +P P+ YS S LS VPP+T D E S
Sbjct: 305 KDGSHNPSVGADPL----YSGGSGISVPSL--LSSVPPVTPLAYDQRPETGSGLGLLSSS 358
Query: 262 H-----------PGLDKK----------GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQ 300
+ G D G L ML ++GK GA + +++
Sbjct: 359 NLYGYGSLTMGDNGYDSMSSYSSSKLYGGLPPPSTLEMLVPANAVGKVLGKGGANIANIR 418
Query: 301 NASGALISFAAPLTKSGERVVTIS 324
SGA+I + + G+R+ IS
Sbjct: 419 KISGAMIEISDAKSARGDRIAHIS 442
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 299 LQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSS 358
++ +GA I + ERV+ +S+ E++D R SP A + + ++ E ++G
Sbjct: 22 IRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQFKTSEKSIEEG--- 78
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
K + LV ++ +GCL G G S +SEM T +I+++ + + CA +N+ ++
Sbjct: 79 ---KEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELV 135
Query: 419 QISGEYKNVQNALSEVVGRLRHNL 442
Q+ GE + AL ++ RLR N+
Sbjct: 136 QVIGEVDVAREALIQIATRLRSNV 159
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 50 IRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVF 109
IR++T I P D RVI+V +D RI S T EAV+ +
Sbjct: 22 IRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRI--------------SPTLEAVLHLQ 67
Query: 110 ERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP-- 167
+ E E +G V L + IG ++GKGG ++ MR + A I ++
Sbjct: 68 FKTSEKSIEEGKEG----VITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDN 123
Query: 168 -PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
P CA +++L+Q+ G ++AL+ + T L+
Sbjct: 124 IPKCAGENEELVQVIGEVDVAREALIQIATRLR 156
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 51/292 (17%)
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPI---CFNRPIEKV------------F 219
D +QITG AV+KAL AV+T + + E P+ + P + F
Sbjct: 4 DNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNF 63
Query: 220 YSNSSDPHREFFPHLSL------VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQ- 272
YS S P LS+ VP LT +++ HS P + +
Sbjct: 64 YSPSDAAISSGHPSLSILGSTPHVPELT-----VSADAHSRLPIYQSVLPVIPAYNTPKC 118
Query: 273 --EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLD 330
E+ LR+L +IGK G ++S++ SGA I E ++TI++ E D
Sbjct: 119 SGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATD 178
Query: 331 TRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
S A +L+ Q + +N+G +GCL G G S V++
Sbjct: 179 DAKSAAVEAVLLL----------QSKINDDNEG-----------KVIGCLIGKGGSIVND 217
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
M T I + GE+ A+ +D ++++ GE +N+++AL ++V RLR ++
Sbjct: 218 MRSKTKAAIYISKGEKPRK-ASSSDELVEVFGEVENLRDALVQIVLRLRDDV 268
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++CP +G +IG+ G I SIR+++ RI + + +I + +
Sbjct: 124 LRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN--------- 174
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+T +A E + +++++ D +G IG ++GK
Sbjct: 175 ------------EATDDAKSAAVEAVLLLQSKINDDNEG------------KVIGCLIGK 210
Query: 147 GGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
GG V MR ++ A I + P A+ D+L+++ G ++ ALV + L+
Sbjct: 211 GGSIVNDMRSKTKAAIYISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLR 265
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 1/175 (0%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ +G G+IG+RG +++ L + A + P R+V ISA E +P
Sbjct: 96 FRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQAELAP 155
Query: 336 VQNAAVLVFARSVEVEG-QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
+AAV +F ++EG F+ + + + +LV L G + + M++
Sbjct: 156 AMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLMQES 215
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
TGT I+++ +++L + +++I G V NAL V+G LR L +L+
Sbjct: 216 TGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRRFLVDHSVLH 270
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 34/300 (11%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FRLV VGGLIGR G +I + T+ R+ G R++L+ +
Sbjct: 96 FRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQ----- 150
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEA---EVEGDGDGDDVAYCGLLANTTKIGVV 143
E++ +A +R+F+ + ++E + G ++ LL + +
Sbjct: 151 ---------AELAPAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHL 201
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAA---IDDQLIQITGATLAVKKALVAVTTCLQH 200
+GK G + M+ +G I ++ + +++++++I GA+L V AL +V L+
Sbjct: 202 IGKQGTTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRR 261
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD-------NASEFHS 253
F R E+V +S + +LV SD N + S
Sbjct: 262 FLVDHSVLHLFERKNEEVAEVQNSSKENQVTNDYALVVNQDLLLSDSRSHHNPNGGRYLS 321
Query: 254 SSADADRDHPGLDKKGRKQEVAL------RMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
D P + R+ V+L M A IIG RG + +++ SGA++
Sbjct: 322 YGHDPSVCDP-YSRDIRRPTVSLISKITQTMRIPLPQAEEIIGVRGQTIAHIRSVSGAMV 380
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 180/440 (40%), Gaps = 69/440 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR V GS+++ I
Sbjct: 290 LRILVQSDMVGAIIGRQGSTIRQITQQTRARVDV--------HRKDNV---GSLEKAITI 338
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 339 Y--------GNPENCTNACKRILEVMQQ-EANNTNKGE-----ICLKILAHNNLIGRIIG 384
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVAVTTCLQHLSTM 204
KGG + R+ E+ KI + + + +++I + GA + +A ++ L+
Sbjct: 385 KGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQSYEN 444
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL-TGNPSDNASEFHSSSADADRDHP 263
+ + P FP L + + T + ++ A +P
Sbjct: 445 DLQAMA---------------PQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYP 489
Query: 264 GLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFA-----APLTKSG 317
+G L+ A G IIG +G+ +R++ SGA + A P
Sbjct: 490 AGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQN 549
Query: 318 ERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFV 377
ER VTI + A L+F + E +GF +G + + V I+V + V
Sbjct: 550 ERRVTIVGSPEAQWK------AQYLIFEKMRE----EGFVAGSDD-VRLTVEIMVPSSQV 598
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEYKNVQNALSEVVG 436
G + G G V E++ VTG+ IKL EQ G + Q D + I G + +VQ+A
Sbjct: 599 GRIIGKGGQNVRELQRVTGSVIKL--PEQ--GASPQEDETTVHIIGPFFSVQSAQR---- 650
Query: 437 RLRHNLKSGEILNEARPRSP 456
R+R + + + RPR P
Sbjct: 651 RIRAMVLQSVVPLQGRPRQP 670
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 9/188 (4%)
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTK- 315
D R+ P +E ++R+L + +IG+ GA VR ++ +GA I L K
Sbjct: 50 DPYRNRPLQYPVPEPEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQE-LHKD 108
Query: 316 -SGERVVTISALEYLDTRHSPVQNAAVLVFAR---SVEVEGQQGFSSGENKGDAVAVSIL 371
SGER++ IS+ E SP A +L+ ++ S E + SGE+K + ++
Sbjct: 109 ASGERLIVISSKEIPADPVSPTIEALILLHSKVSASKVSEPSESEPSGEHK---LVTRLV 165
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V + VGC+ G G ++EM G +I++ + N+ ++Q+SG + AL
Sbjct: 166 VPSKKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREAL 225
Query: 432 SEVVGRLR 439
+E+ RLR
Sbjct: 226 TEIASRLR 233
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 28/225 (12%)
Query: 14 RRGPLNLP---DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
R PL P + S R++C + ++G +IGRSG+ + + + T RI + +
Sbjct: 53 RNRPLQYPVPEPEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGE 112
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERM--WEVEAEVEGDGDGDDV 128
++V+ S I VS T EA+I + ++ +V E + G+
Sbjct: 113 RLIVISSKEI-------------PADPVSPTIEALILLHSKVSASKVSEPSESEPSGEHK 159
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATL 185
L+ + K+G ++G+GG+ +T MR GA+I + P + +++L+Q++G+
Sbjct: 160 LVTRLVVPSKKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPD 219
Query: 186 AVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF 230
++AL + + L+ + F+ P +F P REF
Sbjct: 220 IAREALTEIASRLRD-RILRDGISSFDGPPADIF------PSREF 257
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 71/295 (24%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FR+V P+ +G +IG+ G I IR DTK I + RVI++
Sbjct: 102 VIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSK------- 154
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI---- 140
+ND V E + Q A + + E + D V + ANT ++
Sbjct: 155 ---DNDEKVTDAEKALEQIAHL--------ILKEDDSSLDASKVTAGHVAANTIRLLIAG 203
Query: 141 ---GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATLAVKKALV 192
G ++G G+N+ ++R SGA I +L P P CA+ D+++Q++G AV KAL
Sbjct: 204 SQAGGLIGMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALE 263
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
+ L+ +P R+ ++ +P+ N +
Sbjct: 264 EIGCQLRE------------------------NPPRQV---------ISISPTYNYAAIR 290
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
S P LD V ML S G+IG+ G+ + ++N SGA+I
Sbjct: 291 PS-------QPYLDPTS-VDYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMI 337
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 7/180 (3%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
K+ + Q+V R++ +IGK G ++ ++ + A I A + + ERV+ IS+
Sbjct: 95 KRAKGQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSK 154
Query: 327 ---EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
E + ++ A L+ ++G + + +L+ G L G
Sbjct: 155 DNDEKVTDAEKALEQIAHLILKEDDSSLDASKVTAGHVAAN--TIRLLIAGSQAGGLIGM 212
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAA--QNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ ++ D +G I ++ Q+ CA+ ++D V+Q+SG+ V AL E+ +LR N
Sbjct: 213 SGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLREN 272
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
D V+F ++ +VGGLIGR GS IS IR ++ I GG HR I GS
Sbjct: 302 DYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSA 357
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 31/201 (15%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S++ R P P D V FR++ P VG +IGR G I + +T+ RI G + R
Sbjct: 62 SAEERWP-GWPGDCV-FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDR 119
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
++L+ G + +S +AV+RVF R+ + D D DDV
Sbjct: 120 IVLISGKEEPE--------------AYMSPAMDAVLRVFRRVSGLP-----DNDDDDVQN 160
Query: 131 CG-------LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQI 180
G LL +T+ ++GK G + + SGA + +L P AA D++++ +
Sbjct: 161 AGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDL 220
Query: 181 TGATLAVKKALVAVTTCLQHL 201
G L + KAL A+ L+
Sbjct: 221 QGEALKILKALEAIVGHLRRF 241
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
RM+ IIG++G ++ + + A I + +R+V IS E + SP
Sbjct: 76 FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVA-VSILVGADFVGCLTGSGSSAVSEMEDV 394
+A + VF R V +N G + V +LV + L G S + + +
Sbjct: 136 AMDAVLRVF-RRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVEN 194
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+G ++++ E+ AAQ++ ++ + GE + AL +VG LR L
Sbjct: 195 SGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFL 242
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D V FR++ P VG +IGR G I + +T+ RI G + R++L+ G
Sbjct: 71 PGDCV-FRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEP 129
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV-----AYCG--L 133
+ +S +AV+RVF R+ + D D DDV A+C L
Sbjct: 130 E--------------AYMSPAMDAVLRVFRRVSGLP-----DNDDDDVQNAGSAFCSVRL 170
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKA 190
L +T+ ++GK G + + SGA + +L P AA D++++ + G L + KA
Sbjct: 171 LVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKA 230
Query: 191 LVAVTTCLQHL 201
L A+ L+
Sbjct: 231 LEAIVGHLRKF 241
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
RM+ IIG++G ++ + + A I + +R+V IS E + SP
Sbjct: 76 FRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAV-AVSILVGADFVGCLTGSGSSAVSEMEDV 394
+A + VF R V +N G A +V +LV + L G S + + +
Sbjct: 136 AMDAVLRVF-RRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVEN 194
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+G ++++ E+ AAQ++ ++ + GE + AL +VG LR L
Sbjct: 195 SGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFL 242
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 154/374 (41%), Gaps = 64/374 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
+S+++ P P D V FRL+ P VG +IGR G +I + +T+ RI G G+ R
Sbjct: 66 ASEKKWP-GWPGDCV-FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDR 123
Query: 71 VILVVGSGSIDRRIM-----FCEN---DVVVEGGE-----VSSTQEAVIRVFERMWEVEA 117
+ G ++++++ +N V++ G E +S +AVIRVF+R+ + +
Sbjct: 124 I------GXMEKKMLSVLLKVVDNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGL-S 176
Query: 118 EVEGDGDGDDVA----YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PAC 170
E EGDG D V +C + G +N+ E + +L P
Sbjct: 177 ESEGDGLFDQVNTGEHWCICASTVRSWFAHFGSKFQNLXAFSXE----VYLLXQNEVPFY 232
Query: 171 AAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF 230
AA D++++++ G L V+KAL AV L+ F R S D +
Sbjct: 233 AAADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATI---SQDRQSDT 289
Query: 231 FPHLSLV--PPLTGNPSDNASEFHSSSADADR----DHPGLDKKGRKQ------------ 272
+ SL+ TG SD + S DR +H GL G++
Sbjct: 290 WADKSLLHGTSQTGMGSDYSLPAKRESLYLDRETQMEHSGLPMYGQEHGLSGIRSSGLGR 349
Query: 273 -------EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI-- 323
++A M A IIG GA + ++ SGA+++ E V I
Sbjct: 350 AGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKG 409
Query: 324 -SALEYLDTRHSPV 336
S+ E++ PV
Sbjct: 410 TSSQEFISNHKEPV 423
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 36/233 (15%)
Query: 244 PSDNASEFHSSSADADRDHPGLDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQN 301
PS+N +++ + + P +KK G + R++ IIG++G +++ +
Sbjct: 46 PSENLESESTAAPETEAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCE 105
Query: 302 ASGALISFAAPLTKSGERV---------------------VTISALEYLDTRHSPVQNAA 340
+ A I + +R+ V IS E + SP +A
Sbjct: 106 ETRARIRVLDGAVGTSDRIGXMEKKMLSVLLKVVDNLLEKVLISGREEPEAPLSPAMDAV 165
Query: 341 VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV---SEMEDVTG- 396
+ VF R G S E++GD + + G + C + S S+ +++
Sbjct: 166 IRVFKRVT------GLS--ESEGDGLFDQVNTGEHWCICASTVRSWFAHFGSKFQNLXAF 217
Query: 397 -TDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
++ L+ +V AA ++ ++++ GE VQ AL VVG LR L +L
Sbjct: 218 SXEVYLLXQNEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVL 270
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P +RL+ + VG +IG++G+I+ +IR +T RI G P D RVI++
Sbjct: 99 PQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDA 158
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
R + QEA+ +V R+ E E EG A +L T+
Sbjct: 159 AR--------------HTDAAQEALFKVHARVHEHE---EGPHPPPANATTRMLVCHTQA 201
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQ 179
G ++GK G + +R SGA I +LP P C +D+++Q
Sbjct: 202 GCLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSNDRVVQ 243
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 259 DRDHPGLDKK-------GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
DRD P K+ G + E R+L +IGK G IV+++++ +GA I
Sbjct: 81 DRDGPPDAKRQAIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVE 140
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS-I 370
+ ERV+ ISA Q A V AR E E G + A A + +
Sbjct: 141 GVPNCDERVIVISARSDAARHTDAAQEALFKVHARVHEHE------EGPHPPPANATTRM 194
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
LV GCL G + + E+ + +G IK++ E + C ND V+Q
Sbjct: 195 LVCHTQAGCLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSNDRVVQ 243
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 127/350 (36%), Gaps = 78/350 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I I DTK RI G PG+ R ++V D
Sbjct: 164 FRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPD----- 218
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD-DVAYCGLLANTTKIGVVVG 145
C V+G ++RV +++ V+ G LL T+ G ++G
Sbjct: 219 CSIPPAVDG---------LLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIG 269
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHL- 201
K G + + +G I +L P A DD +++I G + V KA+ V L+
Sbjct: 270 KQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRKFL 329
Query: 202 ----------STMEKSPICFNR-----PIEKVF------------------------YSN 222
+ M++ + N+ P + + Y
Sbjct: 330 VDRSIVGVFETQMQRPDVRANQNVPPGPPHQPWGPPQGFPAPGPGSGGGPAFPPNTQYMP 389
Query: 223 SSDPHREFFPHLSLVP--------PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEV 274
S + ++P L P P D + HSSSA A +Q V
Sbjct: 390 PSHNYDNYYPPADLSPMDKHLHQGPPPAYVRDVSMGIHSSSAQA------------QQSV 437
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
M A +IG GA + ++ ASGA I+ GE V IS
Sbjct: 438 TQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEIS 487
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML IIG++G +R + + A I + ER V +SA E
Sbjct: 157 GWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEE 216
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFS-SGENKGDAVAVSILVGADFVGCLTGSGSSA 387
D P + + V + V V+ S SG + V +LV G L G S
Sbjct: 217 PDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVR--PVVTRLLVADTQAGSLIGKQGST 274
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ +D TG +I+++G E + A ++D +++I GE V A+ V LR L
Sbjct: 275 IKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRKFL 329
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
++R P P D V FRL+ P VG +IGR G +I + +T+ RI G+ R++
Sbjct: 42 EKRWP-GWPGDCV-FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIV 99
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYC 131
LV G + +S +AV+R+F+R+ + E + E +A+C
Sbjct: 100 LVSGKEEPE--------------AALSPAMDAVVRIFKRVSGLSETDAENKESAAGLAFC 145
Query: 132 G--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLA 186
LL +T+ ++GK G + ++ + A + +L + A +D+++++I G L
Sbjct: 146 SIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEALK 205
Query: 187 VKKALVAVTTCLQHL 201
V KAL AV L+
Sbjct: 206 VLKALEAVVGHLRKF 220
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 249 SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
+E S++A A P G + R++ IIG++G +++ + + + I
Sbjct: 27 TETESNAAAAASTPPEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIR 86
Query: 309 -FAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV- 366
APL + +R+V +S E + SP +A V +F R V G + ENK A
Sbjct: 87 VLDAPL-GTPDRIVLVSGKEEPEAALSPAMDAVVRIFKR---VSGLSE-TDAENKESAAG 141
Query: 367 ----AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
++ +LV + L G S + +++ T ++++ G++V A ++ +++I G
Sbjct: 142 LAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQG 201
Query: 423 EYKNVQNALSEVVGRLRHNLKSGEIL 448
E V AL VVG LR L +L
Sbjct: 202 EALKVLKALEAVVGHLRKFLVDHSVL 227
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 175/432 (40%), Gaps = 94/432 (21%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR V GS+++ I
Sbjct: 189 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDNV---GSLEKAITI 237
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A ++ E M + EA G+ +LA+ IG ++GK
Sbjct: 238 Y--------GNPENCTNACKKILEVMQQ-EANSINKGE----ITLKILAHNNLIGRIIGK 284
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVAVTTCLQH----- 200
GG + R+ ++ KI + + + +++I + G + KA +++ L+
Sbjct: 285 GGTTIKRIMQDTDTKITVSSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYEND 344
Query: 201 LSTMEKSPICFN--RPIEKV-------------FYSNSSDPHREFFPHLSLVPPLTGNPS 245
L M + F P+ + Y + P +P+ + +PP G P+
Sbjct: 345 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAP----YPYQASLPPQQGVPA 400
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ QE A + + IIG +G+ +R++ SGA
Sbjct: 401 TDT-----------------------QETAF-LYIPNSSVGAIIGTKGSHIRNIIRFSGA 436
Query: 306 LISFA-----APLTKSGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSS 358
+ A P + ER VTI SP A L+F + E +GF +
Sbjct: 437 SVKIAPIEQDKPAEQQTERKVTIVG--------SPESQWKAQYLIFEKMRE----EGFVA 484
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
G + + + ILV + VG + G G V E++ VTG+ IKL +Q +A + +
Sbjct: 485 GTDD-VRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL-SEQQSTSPSADEEATV 542
Query: 419 QISGEYKNVQNA 430
I G + +VQ+A
Sbjct: 543 HIIGPFFSVQSA 554
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 36/215 (16%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+ G+ GR+ + LR+L IIG++G+ +R + + A + R
Sbjct: 175 YSGVSGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDV--------HRKD 226
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
+ +LE T + +N + +EV Q+ S NKG+ + + IL + +G +
Sbjct: 227 NVGSLEKAITIYGNPENCTNAC-KKILEVMQQEANSI--NKGE-ITLKILAHNNLIGRII 282
Query: 382 GSGSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G G + + M+D TD K+ ++ ND+ +I + G +N+ A S
Sbjct: 283 GKGGTTIKRIMQD---TDTKIT-------VSSINDINSFNLERIITVKGTIENMSKAESM 332
Query: 434 VVGRLRHNLKSGEILNEARPRSPSGRVGGPALHKL 468
+ +LR + + N+ + +P + P LH +
Sbjct: 333 ISSKLRQSYE-----NDLQAMAPQSMM-FPGLHPM 361
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 103/228 (45%), Gaps = 19/228 (8%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTK-SGERVVTISALEYLDTRHS 334
R++ +G G+IG+RG +R L + A + P +G+++V ISA E +
Sbjct: 89 FRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQAELA 148
Query: 335 PVQNAAVLVFARSVEVEG-QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
P +AA+ +F E+EG + + + + +LV + L G + +++
Sbjct: 149 PAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQE 208
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARP 453
TG+ I+++ + +L ++ +++I G NAL V+G LR L +L+
Sbjct: 209 TTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVDHSVLH---- 264
Query: 454 RSPSGRVGGPALHKLHQSVALSPEFEQETIAVQGVDQFVLPLNRSQTL 501
+ +Q++A + + +E Q + + LP++R L
Sbjct: 265 ----------LFERKNQAIAHAQDISKEN---QVSNDYALPVSRDLLL 299
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FRLV VGGLIGR G I + +T+ R+ +L G ++I+
Sbjct: 89 FRLVVAGDKVGGLIGRRGETIRRLCEETRARVR------------VLDPADGVAGQQIVL 136
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVE---AEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ E++ +A I++F+ + E+E A V ++ LL + +
Sbjct: 137 ISATEETQ-AELAPAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHL 195
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACA---AIDDQLIQITGATLAVKKALVAVTTCLQ 199
+GK G + ++ +G+ I ++ +D+++++I GA+L AL +V L+
Sbjct: 196 IGKQGIMIKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLR 254
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S KRR + V FR+V P+ +G +IG+ GS I IR +TK I + R
Sbjct: 50 SPKRRAK----NQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEER 105
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
VI++ S EN V+ E + Q A + + E +A G G A
Sbjct: 106 VIIISSKDS--------EN--VISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAI 155
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATL 185
L+A ++ G ++G G+N+ ++R SGA I +LP P CA+ D+++QI+G
Sbjct: 156 RLLIAG-SQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVP 214
Query: 186 AVKKAL 191
AV KAL
Sbjct: 215 AVLKAL 220
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 131/296 (44%), Gaps = 39/296 (13%)
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
D+ S++ + DH ++ + Q+V R++ +IGK G+ ++ ++ + A
Sbjct: 32 DDGGVIASATGEVADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKA 91
Query: 306 LISFAAPLTKSGERVVTISALE----YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
I A + + ERV+ IS+ + D ++ +Q A++++ + G
Sbjct: 92 TIKIADAIARHEERVIIISSKDSENVISDAENALLQXASLILKEDDSNTD---ALKVGVG 148
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV--VIQ 419
A A+ +L+ GCL G + ++ + +G I ++ Q+ CA+ +D ++Q
Sbjct: 149 HVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQ 208
Query: 420 ISGEYKNVQNALSEVVGRLRH----------NLKSGEIL----------NEARPRSPSG- 458
ISG+ V AL E+ +LR N+ E L N +R R+ SG
Sbjct: 209 ISGDVPAVLKALEEIGCQLRTTNLAADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGA 268
Query: 459 --RVGGPALHKLHQSVAL---SPEFEQETIAVQGVDQFVLPLNRSQTLQTEGRRHA 509
+V G + H+ + + + Q +A Q VD+++ SQ +Q G +H+
Sbjct: 269 MIKVYGGKGEQNHRQIQFGGSAQQAYQVALAKQRVDEYIY----SQLMQQAGAQHS 320
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
NL D V+ ++ P +VGGLIGR GS IS IR ++ I GG +HR I GS
Sbjct: 231 NLAADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSA 290
Query: 79 SIDRRIMFCENDV 91
++ + V
Sbjct: 291 QQAYQVALAKQRV 303
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML IIG++G ++ + + A I + ER V +SA E
Sbjct: 112 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEE 171
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D+ P + + V R V+ G +G SS G V+ +LV A G L G V
Sbjct: 172 PDSSLPPAMDGLLKVHKRIVD--GLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTV 229
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ + ++++G E + A Q+D V+++ GE V A+ + LR L
Sbjct: 230 KSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFL 283
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I I +T+ RI G PG+ R ++V D +
Sbjct: 119 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSL-- 176
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDDVAYCG-----LLANTTKI 140
+ +++V +R+ V+G +GD + G LL ++
Sbjct: 177 ------------PPAMDGLLKVHKRI------VDGLEGDSSHMPPGGKVSTRLLVAASQA 218
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G V ++ S + +L P A DD+++++ G + V KA+ + +
Sbjct: 219 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASH 278
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP 239
L+ +++S I P+ ++ S+ P PH PP
Sbjct: 279 LRKF-LVDRSVI----PLFEMQMQMSNPPIEHMPPHQPWGPP 315
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
+ V RML IIG++G ++ + + A I + ER V +SA E D+
Sbjct: 126 ERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 185
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
P + + V R V+ G +G SS G V+ +LV A G L G V +
Sbjct: 186 SLPPAMDGLLKVHKRIVD--GLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSI 243
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
++ + ++++G E + A Q+D V+++ GE V A+ + LR L
Sbjct: 244 QEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFL 294
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 35/235 (14%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
RRG L+ + V FR++ P VG +IGR G I I +T+ RI G PG+ R ++
Sbjct: 118 RRGGLDGLERVF-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVM 176
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDDVAYCG 132
V D + + +++V +R+ V+G +GD + G
Sbjct: 177 VSAKEEPD--------------SSLPPAMDGLLKVHKRI------VDGLEGDSSHMPPGG 216
Query: 133 -----LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGAT 184
LL ++ G ++GK G V ++ S + +L P A DD+++++ G
Sbjct: 217 KVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEP 276
Query: 185 LAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP 239
+ V KA+ + + L+ +++S I P+ ++ S+ P PH PP
Sbjct: 277 IGVHKAVELIASHLRKF-LVDRSVI----PLFEMQMQMSNPPIEHRPPHQPWGPP 326
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 5 SNPYGYS-SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG 63
+NP S S++R P P V FRL+ P VG +IGR G +I +T RI
Sbjct: 25 ANPTDESESEKRWP-GWPGHCV-FRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDA 82
Query: 64 FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
G+ R++L+ G ++ +S +A++R+F+R+ + +
Sbjct: 83 PVGTPDRIVLISGKEDLE--------------APLSPAMDAILRIFKRVSGLSETDNNNT 128
Query: 124 DGDDVAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLI 178
VA C LL +T+ ++GK G ++ ++ +GA I +L P+ A D+++I
Sbjct: 129 AAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERII 188
Query: 179 QITGATLAVKKALVAVTTCLQHL 201
+ G TL V KAL AV L+
Sbjct: 189 DLQGETLKVLKALEAVVGHLRKF 211
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IIG++G +++ + A I + +R+V IS E L+ SP +A + +F R
Sbjct: 58 IIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSPAMDAILRIFKRV 117
Query: 348 VEVEGQQGFSSGENKGDAVA------VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
G S +N A A + +LV + L G S++ +++ TG I++
Sbjct: 118 ------SGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRV 171
Query: 402 VGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+ G+++ A ++ +I + GE V AL VVG LR L ++
Sbjct: 172 LSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRKFLVDSSVI 218
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
+R +CP +G +I R I+ R DTK +I G + V+ + + SI+ +
Sbjct: 294 YRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIY-NFSIESNVFD 352
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
N V S TQ + RV +R+ E E ++IG V+GK
Sbjct: 353 NSNTFV------SPTQNVLFRVHDRVISDEVHDEN------------FEEASQIGCVIGK 394
Query: 147 GGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL----- 198
GG+ + +R ESGA+I +L P+ D+LIQI+G V KAL + + L
Sbjct: 395 GGQIIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPS 454
Query: 199 --QHL 201
QHL
Sbjct: 455 QSQHL 459
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 24/205 (11%)
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI------ 323
R ++ R L G II + IV+ + + IS ++ E VVTI
Sbjct: 288 RLKDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIE 347
Query: 324 -SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
+ + +T SP QN V R + E EN +A + GC+ G
Sbjct: 348 SNVFDNSNTFVSPTQNVLFRVHDRVISDEVHD-----ENFEEASQI---------GCVIG 393
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN- 441
G + + +G I+++ + + +D +IQISGE V AL ++ RL N
Sbjct: 394 KGGQIIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNP 453
Query: 442 LKSGEILNEARP--RSPSGRVGGPA 464
+S +L P S G + GP
Sbjct: 454 SQSQHLLVXTMPTGYSSGGSLMGPT 478
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 2/174 (1%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML IIG++G ++ + + A I + ER V +SA E
Sbjct: 43 GWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEE 102
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D+ P + + V R V+ G +G SS G V+ +LV A G L G V
Sbjct: 103 PDSSLPPAMDGLLKVHKRIVD--GLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTV 160
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ + ++++G E + A Q+D V+++ GE V A+ + LR L
Sbjct: 161 KSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFL 214
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I I +T+ RI G PG+ R ++V D +
Sbjct: 50 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSL-- 107
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDDVAYCG-----LLANTTKI 140
+ +++V +R+ V+G +GD + G LL ++
Sbjct: 108 ------------PPAMDGLLKVHKRI------VDGLEGDSSHMPPGGKVSTRLLVAASQA 149
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G V ++ S + +L P A DD+++++ G + V KA+ + +
Sbjct: 150 GSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASH 209
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP 239
L+ +++S I P+ ++ S+ P PH PP
Sbjct: 210 LRKF-LVDRSVI----PLFEMQMQMSNPPIEHMPPHQPWGPP 246
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 32/227 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FR+V P+ +G +IG+ G I +R +TK I + RVI++
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK------- 121
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA--YCGLLANTTKIGV 142
+N+ V E + Q A + + E +E G G VA LL ++ G
Sbjct: 122 ---DNENSVTDAEKALQQIAALILKEDGSSIEELKVGTG---HVAANTIRLLIAGSQAGS 175
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATLAVKKALVAVTTC 197
++G G+N+ ++R SGA I +L P P CA+ D+++QI+G LAV KAL +
Sbjct: 176 LIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQ 235
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP 244
L+ N P + + S + + + P S + P +G P
Sbjct: 236 LR-----------VNPPRQVISVSPTYN-YNTMHPPQSYMDPTSGKP 270
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 10/194 (5%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S++DA D ++ + +V R++ +IGK G ++ ++ + A I A +
Sbjct: 50 SNSDAS-DISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAV 108
Query: 314 TKSGERVVTISALE----YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
+ ERV+ IS+ + D + Q AA+++ +E G A +
Sbjct: 109 ARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGSSIE---ELKVGTGHVAANTIR 165
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA--QNDVVIQISGEYKNV 427
+L+ G L G+ + ++ + +G I ++ Q+ CA+ ++D V+QISG+ V
Sbjct: 166 LLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAV 225
Query: 428 QNALSEVVGRLRHN 441
AL E+ +LR N
Sbjct: 226 LKALEEIGNQLRVN 239
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FR+V P+ +G +IG+ G I +R +TK I + RVI++
Sbjct: 69 VLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSK------- 121
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA--YCGLLANTTKIGV 142
+N+ V E + Q A + + E +E G G VA LL ++ G
Sbjct: 122 ---DNENSVTDAEKALQQIAALILKEDGSSIEELKVGTG---HVAANTIRLLIAGSQAGS 175
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATLAVKKAL 191
++G G+N+ ++R SGA I +L P P CA+ D+++QI+G LAV KAL
Sbjct: 176 LIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKAL 229
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 33/268 (12%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S++DA D ++ + +V R++ +IGK G ++ ++ + A I A +
Sbjct: 50 SNSDAS-DVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAV 108
Query: 314 TKSGERVVTISALE----YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
+ ERV+ IS+ + D + Q AA+++ +E G A +
Sbjct: 109 ARYEERVIIISSKDNENSVTDAEKALQQIAALILKEDGSSIE---ELKVGTGHVAANTIR 165
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA--QNDVVIQISGEYKNV 427
+L+ G L G+ + ++ + +G I ++ Q+ CA+ ++D V+QISG+ V
Sbjct: 166 LLIAGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAV 225
Query: 428 QNALSEVVGRLRH-----NLKSGEIL---------------NEARPRSPSG---RVGGPA 464
AL E+ +LR N + E+L N +R R+ SG +V G
Sbjct: 226 LKALEEIGNQLRKTNLAVNYVTFEMLISETLVGGLIGIGGFNISRIRNESGATIKVCGGR 285
Query: 465 LHKLHQSVALSPEFEQETIAVQGVDQFV 492
+ ++ + EQ +A Q VD+++
Sbjct: 286 GEQNYRQIQFGGSAEQVALAKQRVDEYI 313
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 172/417 (41%), Gaps = 64/417 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR V GS+++ I
Sbjct: 123 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDNV---GSLEKAITI 171
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A ++ E M + E + +LA+ IG ++GK
Sbjct: 172 Y--------GNPENCTNACKKILEVMQQ-----EANNTNKGEITLKILAHNNLIGRIIGK 218
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVAVTTCLQH----- 200
GG + R+ ++ KI + + + +++I + G+ + KA +++ L+
Sbjct: 219 GGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYEND 278
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
L M + F S + + S P L G S A + SS +
Sbjct: 279 LQAMAPQSMMFPGLHPMAMMSTAG------MGYSSRGPGLYG--SGPAPYPYQSSLPTQQ 330
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-----APLTK 315
P D QE + + IIG +G+ +R++ SGA + A P +
Sbjct: 331 GVPASDT----QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQ 385
Query: 316 SGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
ER VTI SP A L+F + E +G+ +G + + + ILV
Sbjct: 386 QTERKVTIVG--------SPESQWKAQYLIFEKMRE----EGYVAG-TEDVRLTIEILVP 432
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+ VG + G G V E++ VTG+ IKL +Q +A+ + + I G + +VQ+A
Sbjct: 433 STQVGRIIGKGGQNVRELQRVTGSVIKL-SEQQATPPSAEEETTVHIIGPFFSVQSA 488
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y S +P D + L P VG +IG GS I +I R F
Sbjct: 319 PYPYQSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIR-----------F 367
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
G+ ++ + +++ E V + G S +A +FE+M E E V G
Sbjct: 368 SGASVKIAPLEQDKPAEQQ---TERKVTIVGSP-ESQWKAQYLIFEKMRE-EGYVAGT-- 420
Query: 125 GDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQIT 181
+DV +L +T++G ++GKGG+NV ++ +G+ I + A +A ++ + I
Sbjct: 421 -EDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAEEETTVHII 479
Query: 182 GATLAVKKA 190
G +V+ A
Sbjct: 480 GPFFSVQSA 488
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
GL GR+ + LR+L IIG++G+ +R + + A + R +
Sbjct: 111 GLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDNV 162
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+LE T + +N + +EV Q+ ++ NKG+ + + IL + +G + G
Sbjct: 163 GSLEKAITIYGNPENCTNAC-KKILEVMQQE--ANNTNKGE-ITLKILAHNNLIGRIIGK 218
Query: 384 GSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSEVV 435
G + + M+D TD K+ ++ ND+ +I + G N+ A S +
Sbjct: 219 GGNTIKRIMQD---TDTKIT-------VSSINDINSFNLERIITVKGSIDNMSKAESMIS 268
Query: 436 GRLRHNLKSGEILNEARPRSPSGRVGGPALHKL 468
+LR + + N+ + +P + P LH +
Sbjct: 269 SKLRQSYE-----NDLQAMAPQSMM-FPGLHPM 295
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 257 DADRDHPGLDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT 314
DAD G++KK G E RML IIG++G ++ + + A I
Sbjct: 133 DADTVSGGIEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPP 192
Query: 315 KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS--ILV 372
+ ER V +SA E D+ P + + V R V+G G SS + G VS +LV
Sbjct: 193 GTTERAVMVSAKEEPDSALPPAMDGLLRVHKRI--VDGLDGDSSHASSGTGTKVSTRLLV 250
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALS 432
A G L G V +++ + ++++G E + A Q+D V+++ G+ V A+
Sbjct: 251 PASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVE 310
Query: 433 EVVGRLRHNLKSGEIL 448
+ LR L I+
Sbjct: 311 LIASHLRKFLVDRSII 326
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 136/346 (39%), Gaps = 71/346 (20%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I I +T+ RI G PG+ R ++V D +
Sbjct: 154 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSAL-- 211
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD------GDGDDVAYCGLLANTTKI 140
+ ++RV +R+ + ++GD G G V+ LL ++
Sbjct: 212 ------------PPAMDGLLRVHKRIVD---GLDGDSSHASSGTGTKVS-TRLLVPASQA 255
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G V ++ S + +L P A DD+++++ G V KA+ + +
Sbjct: 256 GSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASH 315
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP-HLSLVPPL-----------TGNPS 245
L+ +++S I P+ ++ + PH E P H S PP GNP
Sbjct: 316 LRKF-LVDRSII----PLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYGNPQ 370
Query: 246 ----DNASEFHSSSAD-----ADRDHPGLDKKGRK------------------QEVALRM 278
E + AD + H G+ GR+ ++ +M
Sbjct: 371 YMPPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQITQQM 430
Query: 279 LFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
A +IG G + ++ ASGA ++ GE V IS
Sbjct: 431 QIPLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEIS 476
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 17 PLNLPDD-----VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRV 71
P +P++ + +RL+CP G +IG++G + ++RD+ +I E +
Sbjct: 252 PYRMPENHGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAER 311
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC 131
++ + + +D ++ + + + E ++ ER + A E +G
Sbjct: 312 VIAIEAQDVDDPTVWAPSQIA-----LLRIVETIVLDAERNTTIGAAEENNGH----IVI 362
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLA-V 187
LL +++I V+G+ G + R+R+ SG+ + +LP P CA +D+++QI+ ++ V
Sbjct: 363 RLLLPSSQIRNVIGRFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENV 422
Query: 188 KKALVAVTTCLQ 199
AL +TT L+
Sbjct: 423 ASALAMITTQLR 434
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 8/180 (4%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKS-GERVVTIS 324
+ G + + R+L A +IGK G V+ LQ SGA I P+ + ERV+ I
Sbjct: 257 ENHGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAIE 316
Query: 325 ALEYLD-TRHSPVQNAAVLVFARSVEVEGQQGFSSG---ENKGDAVAVSILVGADFVGCL 380
A + D T +P Q A+L ++ ++ ++ + G EN G V + +L+ + + +
Sbjct: 317 AQDVDDPTVWAPSQ-IALLRIVETIVLDAERNTTIGAAEENNGHIV-IRLLLPSSQIRNV 374
Query: 381 TGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGE-YKNVQNALSEVVGRLR 439
G + + + +G+ ++++ + CA +ND V+QIS E +NV +AL+ + +LR
Sbjct: 375 IGRFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLR 434
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 169/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 135
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 136 Y--------GNPDNCTNACKRILEVMQQ-EALSTNKGE-----ICLKILAHNNLIGRIIG 181
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 182 KSGNTIKRIMQDTDTKITV------SSIND----INSYNL---ERIITVKGLIENMSRAE 228
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 229 ------NQISTKLRQSYENDLQAIAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 282
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG +G+ +RS+ S A + A
Sbjct: 283 FAMSKTPASVVPPAFPND--MQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIA 339
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 340 PLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDDVR- 388
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G++
Sbjct: 389 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGQFY 448
Query: 426 NVQNA 430
+VQ+A
Sbjct: 449 SVQSA 453
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 30/191 (15%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+PG+ GR+ + LR+L IIG++G+ +R++ S A + R
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKE 124
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
+ +LE T + N R +EV Q+ S+ NKG+ + + IL + +G +
Sbjct: 125 NVGSLEKSITIYGNPDNCTN-ACKRILEVMQQEALST--NKGE-ICLKILAHNNLIGRII 180
Query: 382 G-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G SG++ M+D TD K+ ++ ND+ +I + G +N+ A ++
Sbjct: 181 GKSGNTIKRIMQD---TDTKIT-------VSSINDINSYNLERIITVKGLIENMSRAENQ 230
Query: 434 VVGRLRHNLKS 444
+ +LR + ++
Sbjct: 231 ISTKLRQSYEN 241
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 129/314 (41%), Gaps = 77/314 (24%)
Query: 7 PYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPG 66
P G ++KR DV+ FR+V P+ +G +IG+ G I IR +TK I
Sbjct: 58 PEGSAAKRAKA----QDVI-FRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIAR 112
Query: 67 SDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD 126
+ RVI++ E+D VV E + + A + + E E +
Sbjct: 113 HEERVIIISSK----------ESDCVVSDAENALKKIATL--------ILKEDESPAESS 154
Query: 127 DVAYCGLL-ANTTKI-------GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI-- 173
V G L ANT ++ G ++G G+N+ ++R SGA I +L P P CA+
Sbjct: 155 KVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNIEKLRNSSGATITVLAPNQLPLCASAHE 214
Query: 174 DDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
D+++QI+G V KA+ + L+ P ++V + + + P
Sbjct: 215 SDRVVQISGDVPVVLKAVEEIGCQLRE------------NPPKQVISISPTYNYATVRPT 262
Query: 234 LSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRG 293
V P +SAD V L M+ S G+IG+ G
Sbjct: 263 QPYVDP--------------TSADY---------------VTLEMMVSETLVGGLIGRCG 293
Query: 294 AIVRSLQNASGALI 307
+ + ++N SGA+I
Sbjct: 294 SNISRIRNESGAMI 307
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 104/239 (43%), Gaps = 25/239 (10%)
Query: 226 PHREFFPH-------------LSLVPPLTGNPSDNASEFHSSSAD----ADRDHPGLDKK 268
P+ +++P ++ VPP++ P D + D AD K+
Sbjct: 6 PYTQYYPQTTSTVMPQPGGIPMNTVPPVSFPPPDIYAATAKRRRDEFDVADEPEGSAAKR 65
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
+ Q+V R++ +IGK G ++ ++ + A I A + + ERV+ IS+ E
Sbjct: 66 AKAQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKES 125
Query: 329 LDTRHSPVQNA----AVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSG 384
D S +NA A L+ + E + G A + +L+ G L G
Sbjct: 126 -DCVVSDAENALKKIATLIL-KEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVS 183
Query: 385 SSAVSEMEDVTGTDIKLVGGEQVLGCAA--QNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ ++ + +G I ++ Q+ CA+ ++D V+QISG+ V A+ E+ +LR N
Sbjct: 184 GQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLREN 242
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 134/314 (42%), Gaps = 47/314 (14%)
Query: 9 GYSSKR--RGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPG 66
G+ +KR RG D+V FR+V + +G +IG+ GS I+ +R DT RI
Sbjct: 81 GFRAKRAARG-----RDIV-FRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTP 134
Query: 67 SDHRVILVVGSG-------SIDRRIMFCENDVVVEGGEVSSTQEAVIR-VFERMWEVEAE 118
+ RVI++ G + ++ ++ ++ E GE S+T + R V M
Sbjct: 135 LEDRVIIISSKGEEEEETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMR---- 190
Query: 119 VEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAID- 174
LL ++ G ++G G+ + +R +SGA I +LP P CA+
Sbjct: 191 --------------LLIAGSQAGSLIGASGKTIKEIRNDSGATIKILPQNLSPICASASE 236
Query: 175 -DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
D+L+QI+G V KAL + L+ E + RP +Y+ S +
Sbjct: 237 TDRLVQISGEVSQVLKALDHIGVTLREHPPRE---VISTRP---TYYAGLSPANGLMVLP 290
Query: 234 LSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRG 293
+++P N S + A + +V + M A G+IGKRG
Sbjct: 291 QTVLPGY--NMQTGNSNYSYLGAAGRAAGGTISAAFALPKVTVEMKIPSSVAGGVIGKRG 348
Query: 294 AIVRSLQNASGALI 307
+ +++ SGA++
Sbjct: 349 DNISQIRSLSGAIV 362
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
+ R +++ R++ + +IGK+G+ + L+ +GA I A P+T +RV+ IS+
Sbjct: 86 RAARGRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSK 145
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSS--GENKGDAVAVSILVGADFVGCLTGSG 384
+ S + A + + +E G+ ++ G + +L+ G L G+
Sbjct: 146 GEEEEETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGAS 205
Query: 385 SSAVSEMEDVTGTDIKLV--GGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+ E+ + +G IK++ + A++ D ++QISGE V AL + LR +
Sbjct: 206 GKTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREH 264
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 172/417 (41%), Gaps = 64/417 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR G+ I I + T+ R+ HR V GS+++ I
Sbjct: 114 LRILVQSDMVGAIIGRQGTTIRQITQLTRARVDV--------HRKDNV---GSLEKAITI 162
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A ++ E M + E + +LA+ IG ++GK
Sbjct: 163 Y--------GNPENCTNACKKILEVMQQ-----EANNTNKGEITLKILAHNNLIGRIIGK 209
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVAVTTCLQH----- 200
GG + R+ ++ KI + + + +++I + G+ + KA +++ L+
Sbjct: 210 GGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYEND 269
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
L M + F S + + S P L G S A + SS +
Sbjct: 270 LQAMAPQSMMFPGLHPMAMMSTAG------MGYSSRGPGLYG--SGPAPYPYQSSLPTQQ 321
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-----APLTK 315
P D QE + + IIG +G+ +R++ SGA + A P +
Sbjct: 322 GVPASDT----QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQ 376
Query: 316 SGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
ER VTI SP A L+F + E +G+ +G + + + ILV
Sbjct: 377 QTERKVTIVG--------SPESQWKAQYLIFEKMRE----EGYVAG-TEDVRLTIEILVP 423
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+ VG + G G V E++ VTG+ IKL +Q +A+ + + I G + +VQ+A
Sbjct: 424 STQVGRIIGKGGQNVRELQRVTGSVIKL-SEQQATPPSAEEETTVHIIGPFFSVQSA 479
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y S +P D + L P VG +IG GS I +I R F
Sbjct: 310 PYPYQSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIR-----------F 358
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
G+ ++ + +++ E V + G S +A +FE+M E E V G
Sbjct: 359 SGASVKIAPLEQDKPAEQQ---TERKVTIVGSP-ESQWKAQYLIFEKMRE-EGYVAGT-- 411
Query: 125 GDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQIT 181
+DV +L +T++G ++GKGG+NV ++ +G+ I + A +A ++ + I
Sbjct: 412 -EDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAEEETTVHII 470
Query: 182 GATLAVKKA 190
G +V+ A
Sbjct: 471 GPFFSVQSA 479
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
++R P P D V FRL+ P VGG+IGR G +I + +TK R+ G R+I
Sbjct: 60 EQRWP-GWPGDCV-FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRII 117
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFER---MWEVEAEVEGDGDGDDVA 129
L+ G ++ +S +AVIR+F+R + E ++E +G G +
Sbjct: 118 LISGKEELE--------------AAISPAMDAVIRIFKRVSGLSETDSENKGPA-GVTLC 162
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC---AAIDDQLIQITGATLA 186
LL +T+ ++GK G + ++ SGA + +L A +++++ + G L
Sbjct: 163 SIRLLVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALM 222
Query: 187 VKKALVAVTTCLQHL 201
V KAL AV L+
Sbjct: 223 VLKALEAVIGHLRKF 237
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 18/214 (8%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ GIIG++G +++ L + + A + +R++ IS E L+ SP
Sbjct: 72 FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISP 131
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGCLTGSGSSAVSEM 391
+A + +F R V G S ENKG A ++ +LV + L G + + +
Sbjct: 132 AMDAVIRIFKR---VSGLSETDS-ENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSI 187
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL--- 448
++ +G ++++ G++V A + ++ + GE V AL V+G LR L IL
Sbjct: 188 QESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDHSILPVY 247
Query: 449 ----NEARP---RSPSGRVGGPALHKLHQSVALS 475
N + P R P LH Q+ S
Sbjct: 248 EKTYNASLPQQDRQAETWSDKPLLHTTSQTSMFS 281
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 13/170 (7%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTK--SGERVVTISALEYL 329
+E ++R+L + +IGK GA VR ++ +GA I + K SGER++ IS+ E
Sbjct: 31 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQE-IDKDASGERLIIISSNEIP 89
Query: 330 DTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVS 389
SP A +L+ + V ++ SS ++V + VGC+ G G ++
Sbjct: 90 AEPISPAIEALILLHDK-VSAPSEKHHSS---------TRLVVPSSKVGCIIGEGGKVIT 139
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+M TG +I++ + +D ++Q++G + AL+E+ RLR
Sbjct: 140 DMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 189
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 24/178 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I
Sbjct: 33 FSIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLI 81
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ N++ E +S EA+I + ++ V A E L+ ++K+G ++
Sbjct: 82 IISSNEIPAE--PISPAIEALILLHDK---VSAPSEKHHSS-----TRLVVPSSKVGCII 131
Query: 145 GKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+GG+ +T MR +GA+I + P + DD+L+Q+ G + AL + + L+
Sbjct: 132 GEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 189
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 168/423 (39%), Gaps = 76/423 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR + GS+++ I
Sbjct: 190 LRILVQSDMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDNL---GSLEKAITI 238
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A ++ E M + EA G+ +LA+ IG ++GK
Sbjct: 239 Y--------GNPENCTNACKKILEVMHQ-EASNTNKGE----ITLKILAHNNLIGRIIGK 285
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTTCLQ 199
GG + R+ ++ KI + ++I+D ++I + G+ + KA ++ L+
Sbjct: 286 GGNTIKRIMQDTDTKITV------SSINDINSFNLERIITVKGSIENMSKAEAMISNKLR 339
Query: 200 H-----LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSS 254
L M + F S +S + P L P P S
Sbjct: 340 QSYENDLQAMAPQSMMFPGLHPMAMMSTASMGYNSRGPALYGTGPA---PYPYQSNLTPQ 396
Query: 255 SADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---- 310
D QE + + IIG +G+ +R++ SGA + A
Sbjct: 397 QGVLTSD---------AQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLES 446
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSSGENKGDAVA 367
P + ER VTI SP A L+F + E +GF SG + +
Sbjct: 447 DKPAEQQTERKVTIVG--------SPESQWKAQYLIFEKMRE----EGFVSG-TEDVRLT 493
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
V ILV + VG + G G V E++ VTG+ IKL +Q A + + I G + +V
Sbjct: 494 VEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKL-SEQQATPPTADEETTVHIIGPFFSV 552
Query: 428 QNA 430
Q+A
Sbjct: 553 QSA 555
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 102/247 (41%), Gaps = 36/247 (14%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
GL GR+ + LR+L IIG++G+ +R + + A + R +
Sbjct: 178 GLPGAGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDNL 229
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+LE T + +N + +EV Q+ +S NKG+ + + IL + +G + G
Sbjct: 230 GSLEKAITIYGNPENCTN-ACKKILEVMHQE--ASNTNKGE-ITLKILAHNNLIGRIIGK 285
Query: 384 GSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSEVV 435
G + + M+D TD K+ ++ ND+ +I + G +N+ A + +
Sbjct: 286 GGNTIKRIMQD---TDTKIT-------VSSINDINSFNLERIITVKGSIENMSKAEAMIS 335
Query: 436 GRLRHNLKSGEILNEARPRSPSGRVGGPALHKLHQSVALSPEFEQETIAVQGVDQFVLPL 495
+LR + + N+ + +P + P LH + S + A+ G P
Sbjct: 336 NKLRQSYE-----NDLQAMAPQSMM-FPGLHPMAMMSTASMGYNSRGPALYGTGPAPYPY 389
Query: 496 NRSQTLQ 502
+ T Q
Sbjct: 390 QSNLTPQ 396
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 103/234 (44%), Gaps = 28/234 (11%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FR+V P VG +IGR G +I + +TK R+ G G+ RV+L
Sbjct: 38 KRWP-GWPGDSV-FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVL 95
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG- 132
V G G ++ +A+IRVF+R+ + +V D A G
Sbjct: 96 VSGKEE--------------PGLDLPPAMDALIRVFKRVNGI-TDVAADSTTQTAAPPGV 140
Query: 133 ----LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITGA 183
LL + ++GK G ++ ++ +GA I ++ P D+++++I G
Sbjct: 141 CAARLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGE 200
Query: 184 TLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV 237
T V KAL AV+ L+ F + V S+D + PH S+V
Sbjct: 201 TEKVLKALQAVSNHLRKFLVDHSVLPLFEKTNAPVSQDRSADTWAD-MPHHSIV 253
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 6/178 (3%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
RM+ IIG++G +++ L + A + + ERVV +S E P
Sbjct: 49 FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPP 108
Query: 336 VQNAAVLVFARS---VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
+A + VF R +V + G A ++ GA + + G+S + ++
Sbjct: 109 AMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGAS-IKAIQ 167
Query: 393 DVTGTDIKLVGGEQVLG--CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+ TG I+++ ++ ++ +++I GE + V AL V LR L +L
Sbjct: 168 EGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVL 225
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 169/430 (39%), Gaps = 90/430 (20%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR V GS+++ I
Sbjct: 132 LRILVQSDMVGAIIGRQGSTIRQITQQTRARVDV--------HRKDNV---GSLEKAITI 180
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY---CGLLANTTKIGVV 143
N + A R+ E M + EA G Y +LA+ IG +
Sbjct: 181 YGNP--------ENCTNACKRILEVMQQ-EANNTNKGYAKKYYYEICLKILAHNNLIGRI 231
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTT 196
+GKGG + R+ E+ KI + ++I+D ++I + GA + +A ++
Sbjct: 232 IGKGGNTIKRIMQETDTKITV------SSINDINSFNLERIITVKGAIDNMSRAEAQISA 285
Query: 197 CLQHLSTMEKSPICFNRPIEKVFYSN---SSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
L+ Y N + P FP L P+ +
Sbjct: 286 KLRQS------------------YENDLQAMAPQTMMFPGLH---PMAMMATAGIGYGSR 324
Query: 254 SSADADRDHPGLDKKGRKQ-----EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
+PG+ G Q + + IIG +G+ +R++ SGA +
Sbjct: 325 GLYTGQAPYPGMYPAGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVK 384
Query: 309 FA-----APLTKSGERVVTISALEYLDTRHSP--VQNAAVLVFARSVEVEGQQGFSSGEN 361
A P ER VTI SP A L+F + E +GF +G +
Sbjct: 385 IAPIDETKPQETQNERRVTIVG--------SPEAQWKAQYLIFEKMRE----EGFVAGSD 432
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQI 420
+ V I+V + VG + G G V E++ VTG+ IKL EQ G + Q D + I
Sbjct: 433 DVR-LTVEIMVPSSQVGRIIGKGGQNVRELQRVTGSVIKL--PEQ--GASPQEDETTVHI 487
Query: 421 SGEYKNVQNA 430
G + +VQ+A
Sbjct: 488 IGPFFSVQSA 497
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 167/429 (38%), Gaps = 80/429 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 135
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTTKIG 141
G + A R+ E M + E G+ C +LA+ IG
Sbjct: 136 Y--------GNPENCTNACKRILEVMQQ---EAISTNKGELSPECSEICLKILAHNNLIG 184
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++GK G + R+ ++ KI + ++I+D I L + ++ V ++++
Sbjct: 185 RIIGKSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENM 231
Query: 202 STMEKSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSD 246
S E N+ K+ S +D P FP L + + T P
Sbjct: 232 SRAE------NQISTKLRQSYENDLQAIAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFP 285
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
+ F S A P QE + IIG RG+ +RS+ S A
Sbjct: 286 SCQSFAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNAS 342
Query: 307 ISFA-----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+ A PL + ER VTI + A ++F + E +GF G +
Sbjct: 343 LKIAPLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTD 392
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
+ V +LV + VG + G G V E++ VTG+ IKL + + I
Sbjct: 393 DV-RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHII 451
Query: 422 GEYKNVQNA 430
G + +VQ+A
Sbjct: 452 GLFYSVQSA 460
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 44/219 (20%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 51 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 110
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 111 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEAIST- 160
Query: 360 ENKGD------AVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
NKG+ + + IL + +G + G SG++ M+D TD K+ ++
Sbjct: 161 -NKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSS 209
Query: 413 QNDV-------VIQISGEYKNVQNALSEVVGRLRHNLKS 444
ND+ +I + G +N+ A +++ +LR + ++
Sbjct: 210 INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYEN 248
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + ++K RI G PG R +++ D
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPD----- 164
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-------DDVAYCGLLANTTK 139
+S + + RV++R+ + DGD +V LL ++
Sbjct: 165 ---------APISPAMDGLFRVYKRITD-----GSDGDSGQPERNISNVGPTRLLVPASQ 210
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G ++GK G + ++ S + + ++ P A DD++++I G + V+KAL ++ + L
Sbjct: 211 AGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Query: 199 QHL 201
+
Sbjct: 271 RKF 273
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 12/209 (5%)
Query: 245 SDNA-----SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
SDNA + S +AD+ PG E R+L IIG++G ++ +
Sbjct: 79 SDNAYNGEVKQQDSLPVEADKKWPGW-----PGESVFRILIPAQKVGAIIGRKGEFIKKM 133
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A I ER V ISA + D SP + V+ R +
Sbjct: 134 CEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLFRVYKRITDGSDGDSGQPE 193
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
N + +LV A G L G + + ++D + + +++V E + A +D V++
Sbjct: 194 RNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVE 251
Query: 420 ISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
I GE VQ AL + LR L +L
Sbjct: 252 IQGEPVGVQKALESIASHLRKFLVDRSVL 280
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 167/429 (38%), Gaps = 80/429 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 135
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTTKIG 141
G + A R+ E M + E G+ C +LA+ IG
Sbjct: 136 Y--------GNPENCTNACKRILEVMQQ---EAISTNKGELSPECSEICLKILAHNNLIG 184
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++GK G + R+ ++ KI + ++I+D I L + ++ V ++++
Sbjct: 185 RIIGKSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENM 231
Query: 202 STMEKSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSD 246
S E N+ K+ S +D P FP L + + T P
Sbjct: 232 SRAE------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFP 285
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
+ F S A P QE + IIG RG+ +RS+ S A
Sbjct: 286 SCQSFAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNAS 342
Query: 307 ISFA-----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+ A PL + ER VTI + A ++F + E +GF G +
Sbjct: 343 LKIAPLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTD 392
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
+ V +LV + VG + G G V E++ VTG+ IKL + + I
Sbjct: 393 DV-RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHII 451
Query: 422 GEYKNVQNA 430
G + +VQ+A
Sbjct: 452 GLFYSVQSA 460
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 96/219 (43%), Gaps = 44/219 (20%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 51 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 110
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 111 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEAIST- 160
Query: 360 ENKGD------AVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
NKG+ + + IL + +G + G SG++ M+D TD K+ ++
Sbjct: 161 -NKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSS 209
Query: 413 QNDV-------VIQISGEYKNVQNALSEVVGRLRHNLKS 444
ND+ +I + G +N+ A +++ +LR + ++
Sbjct: 210 INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYEN 248
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 24/196 (12%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FRLV P VG +IGR G +I + +TK R+ G G+ R++L
Sbjct: 41 KRWP-GWPGDSV-FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL 98
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCG 132
V SG D G E+ +A++RVF+R+ + + EG C
Sbjct: 99 V--SGKED------------PGLELPPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCA 144
Query: 133 --LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITGATL 185
LL + ++GK G + ++ +GA I ++ P D+++I+I G T
Sbjct: 145 ARLLVPGAQAINLIGKQGATIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTE 204
Query: 186 AVKKALVAVTTCLQHL 201
V KAL AV+ L+
Sbjct: 205 KVLKALQAVSNHLRKF 220
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 5/177 (2%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +++ L + A + + ER+V +S E P
Sbjct: 52 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELPP 111
Query: 336 VQNAAVLVFARSVEVE--GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+A + VF R + + +G + G A ++ GA + L G + + +++
Sbjct: 112 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAIN-LIGKQGATIKAIQE 170
Query: 394 VTGTDIKLVGGEQVLG--CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
TG I+++ ++ ++ +I+I G+ + V AL V LR L +L
Sbjct: 171 STGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKFLVDHSVL 227
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 167/429 (38%), Gaps = 80/429 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 138 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 186
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTTKIG 141
G + A R+ E M + E G+ C +LA+ IG
Sbjct: 187 Y--------GNPENCTNACKRILEVMQQ---EAISTNKGELSPECSEICLKILAHNNLIG 235
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++GK G + R+ ++ KI + ++I+D I L + ++ V ++++
Sbjct: 236 RIIGKSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENM 282
Query: 202 STMEKSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSD 246
S E N+ K+ S +D P FP L + + T P
Sbjct: 283 SRAE------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFP 336
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
+ F S A P QE + IIG RG+ +RS+ S A
Sbjct: 337 SCQSFAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNAS 393
Query: 307 ISFA-----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+ A PL + ER VTI + A ++F + E +GF G +
Sbjct: 394 LKIAPLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTD 443
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
+ V +LV + VG + G G V E++ VTG+ IKL + + I
Sbjct: 444 DVR-LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHII 502
Query: 422 GEYKNVQNA 430
G + +VQ+A
Sbjct: 503 GLFYSVQSA 511
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 105/243 (43%), Gaps = 50/243 (20%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 102 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 161
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 162 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEAIST- 211
Query: 360 ENKGD------AVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
NKG+ + + IL + +G + G SG++ M+D TD K+ ++
Sbjct: 212 -NKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSS 260
Query: 413 QNDV-------VIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPAL 465
ND+ +I + G +N+ A +++ +LR + ++ L P+S + P L
Sbjct: 261 INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYEND--LQAMAPQS----LMFPGL 314
Query: 466 HKL 468
H +
Sbjct: 315 HPM 317
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + ++K RI G PG R +++ D
Sbjct: 112 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPD----- 166
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-------DDVAYCGLLANTTK 139
+S + + RV++R+ + DGD +V LL ++
Sbjct: 167 ---------APISPAMDGLFRVYKRITD-----GSDGDSGQPERNISNVGPTRLLVPASQ 212
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G ++GK G + ++ S + + ++ P A DD++++I G + V+KAL ++ + L
Sbjct: 213 AGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 272
Query: 199 QHL 201
+
Sbjct: 273 RKF 275
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 12/209 (5%)
Query: 245 SDNA-----SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
SDNA + S +AD+ PG E R+L IIG++G ++ +
Sbjct: 81 SDNAYNGEVKQQDSLPVEADKKWPGWPG-----ESVFRILIPAQKVGAIIGRKGEFIKKM 135
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A I ER V ISA + D SP + V+ R +
Sbjct: 136 CEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLFRVYKRITDGSDGDSGQPE 195
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
N + +LV A G L G + + ++D + + +++V E + A +D V++
Sbjct: 196 RNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVE 253
Query: 420 ISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
I GE VQ AL + LR L +L
Sbjct: 254 IQGEPVGVQKALESIASHLRKFLVDRSVL 282
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 168/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSVEKSITI 135
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 136 Y--------GNPENCTNACKRILEVMQQ-EALSTNKGE-----ICLKILAHNNLIGRIIG 181
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 182 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 228
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 229 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 282
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG +G+ +RS+ S A + A
Sbjct: 283 FAMSKTPASVVPPVFPND--LQETTF-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIA 339
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 340 PLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDD-VR 388
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 389 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFY 448
Query: 426 NVQNA 430
+VQ+A
Sbjct: 449 SVQSA 453
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 51 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 110
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + ++E T + +N R +EV Q+ S+
Sbjct: 111 TQQSRARVDV--------HRKENVGSVEKSITIYGNPENCTNAC-KRILEVMQQEALST- 160
Query: 360 ENKGDAVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-- 416
NKG+ + + IL + +G + G SG++ M+D TD K+ ++ ND+
Sbjct: 161 -NKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSSINDINS 208
Query: 417 -----VIQISGEYKNVQNALSEVVGRLRHNLKS 444
+I + G +N+ A +++ +LR + ++
Sbjct: 209 FNLERIITVKGLIENMSRAENQISTKLRQSYEN 241
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 167/429 (38%), Gaps = 80/429 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 193
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTTKIG 141
G + A R+ E M + E G+ C +LA+ IG
Sbjct: 194 Y--------GNPENCTNACKRILEVMQQ---EAISTNKGELSPECSEICLKILAHNNLIG 242
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++GK G + R+ ++ KI + ++I+D I L + ++ V ++++
Sbjct: 243 RIIGKSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENM 289
Query: 202 STMEKSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSD 246
S E N+ K+ S +D P FP L + + T P
Sbjct: 290 SRAE------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFP 343
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
+ F S A P QE + IIG RG+ +RS+ S A
Sbjct: 344 SCQSFAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNAS 400
Query: 307 ISFA-----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+ A PL + ER VTI + A ++F + E +GF G +
Sbjct: 401 LKIAPLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTD 450
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
+ V +LV + VG + G G V E++ VTG+ IKL + + I
Sbjct: 451 DV-RLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHII 509
Query: 422 GEYKNVQNA 430
G + +VQ+A
Sbjct: 510 GLFYSVQSA 518
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 105/243 (43%), Gaps = 50/243 (20%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 109 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 168
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 169 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEAIST- 218
Query: 360 ENKGD------AVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
NKG+ + + IL + +G + G SG++ M+D TD K+ ++
Sbjct: 219 -NKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSS 267
Query: 413 QNDV-------VIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPAL 465
ND+ +I + G +N+ A +++ +LR + ++ L P+S + P L
Sbjct: 268 INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYEND--LQAMAPQS----LMFPGL 321
Query: 466 HKL 468
H +
Sbjct: 322 HPM 324
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 24/196 (12%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FRLV P VG +IGR G +I + TK R+ G G+ R++L
Sbjct: 31 KRWP-GWPGDSV-FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVL 88
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCG 132
V SG D G E+S +A++RVF+R+ + + EG C
Sbjct: 89 V--SGKED------------PGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCA 134
Query: 133 --LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITGATL 185
LL + ++GK G + ++ +GA I ++ P D+++++I G T
Sbjct: 135 ARLLVPGAQAINLIGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTE 194
Query: 186 AVKKALVAVTTCLQHL 201
V KAL AV+ L+
Sbjct: 195 KVLKALQAVSNHLRKF 210
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +++ L + A + + ER+V +S E SP
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 336 VQNAAVLVFARSVEVE--GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+A + VF R + + +G + G A ++ GA + L G + + +++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAIN-LIGKQGATIKAIQE 160
Query: 394 VTGTDIKLVGGE--QVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
TG I+++ + + ++ +++I G+ + V AL V LR L +L
Sbjct: 161 STGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVL 217
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + ++K RI G PG R +++ D
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPD----- 164
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-------DDVAYCGLLANTTK 139
+S + + RV++R+ + DGD +V LL ++
Sbjct: 165 ---------APISPAMDGLFRVYKRITD-----GSDGDSGQPERNISNVGPTRLLVPASQ 210
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G ++GK G + ++ S + + ++ P A DD++++I G + V+KAL ++ + L
Sbjct: 211 AGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Query: 199 QHL 201
+
Sbjct: 271 RKF 273
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 12/209 (5%)
Query: 245 SDNA-----SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
SDNA + S +AD+ PG E R+L IIG++G ++ +
Sbjct: 79 SDNAYNGEVKQQDSLPVEADKKWPGWPG-----ESVFRILIPAQKVGAIIGRKGEFIKKM 133
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A I ER V ISA + D SP + V+ R +
Sbjct: 134 CEESKARIKILDGPPGVPERTVMISAKDEPDAPISPAMDGLFRVYKRITDGSDGDSGQPE 193
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
N + +LV A G L G + + ++D + + +++V E + A +D V++
Sbjct: 194 RNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVE 251
Query: 420 ISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
I GE VQ AL + LR L +L
Sbjct: 252 IQGEPVGVQKALESIASHLRKFLVDRSVL 280
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 174/417 (41%), Gaps = 64/417 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + ++ R+ HR V GS+++ I
Sbjct: 149 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDV--------HRKDNV---GSLEKAITI 197
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A ++ + M + EA G+ +LA+ IG ++GK
Sbjct: 198 Y--------GNPENCTNACKKILDVMQQ-EAASTNKGE----ITLKILAHNNLIGRIIGK 244
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVAVTTCLQH----- 200
GG + R+ ++ +KI + + + +++I + G + KA +++ L+
Sbjct: 245 GGNTIKRIMQDTDSKITVSSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYEND 304
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
L M + F S + + S P L G S A + SS +
Sbjct: 305 LQAMAPQSMMFPGLHPMAMMSTAG------MGYSSRGPGLYG--SGPAPYPYQSSLPTQQ 356
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-----APLTK 315
P D QE + + IIG +G+ +R++ SGA + A P +
Sbjct: 357 GVPASDT----QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQ 411
Query: 316 SGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
ER VTI SP A L+F + E +G+ +G + + + ILV
Sbjct: 412 QTERKVTIIG--------SPESQWKAQYLIFEKMRE----EGYVAG-TEDVRLTIEILVP 458
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+ VG + G G V E++ VTG+ IKL +Q +A+ + + I G + +VQ+A
Sbjct: 459 STQVGRIIGKGGQNVRELQRVTGSVIKL-SEQQATPPSAEEETTVHIIGPFFSVQSA 514
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y S +P D + L P VG +IG GS I +I R F
Sbjct: 345 PYPYQSSLPTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIR-----------F 393
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
G+ ++ + +++ E V + G S +A +FE+M E E V G
Sbjct: 394 SGASVKIAPLEQDKPAEQQ---TERKVTIIGSP-ESQWKAQYLIFEKMRE-EGYVAGT-- 446
Query: 125 GDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQIT 181
+DV +L +T++G ++GKGG+NV ++ +G+ I + A +A ++ + I
Sbjct: 447 -EDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSAEEETTVHII 505
Query: 182 GATLAVKKA 190
G +V+ A
Sbjct: 506 GPFFSVQSA 514
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 36/213 (16%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
GL GR+ + LR+L IIG++G+ +R + S A + R +
Sbjct: 137 GLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDV--------HRKDNV 188
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+LE T + +N + ++V Q+ S+ NKG+ + + IL + +G + G
Sbjct: 189 GSLEKAITIYGNPENCTN-ACKKILDVMQQEAAST--NKGE-ITLKILAHNNLIGRIIGK 244
Query: 384 GSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSEVV 435
G + + M+D TD K+ ++ ND+ +I + G +N+ A S +
Sbjct: 245 GGNTIKRIMQD---TDSKIT-------VSSINDINSFNLERIITVKGTIENMSKAESMIS 294
Query: 436 GRLRHNLKSGEILNEARPRSPSGRVGGPALHKL 468
+LR + + N+ + +P + P LH +
Sbjct: 295 SKLRQSYE-----NDLQAMAPQSMM-FPGLHPM 321
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + ++K RI G PG R +++ D
Sbjct: 110 FRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPD----- 164
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-------DDVAYCGLLANTTK 139
+S + + RV++R+ + DGD +V LL ++
Sbjct: 165 ---------APISPAMDGLFRVYKRITD-----GSDGDSGQPERNISNVGPTRLLVPASQ 210
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G ++GK G + ++ S + + ++ P A DD++++I G + V+KAL ++ + L
Sbjct: 211 AGSLIGKQGATIKSIQDSSKSIVRIVETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Query: 199 QHL 201
+
Sbjct: 271 RKF 273
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 7/192 (3%)
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKS 316
+AD+ PG E R+L IIG++G ++ + S A I
Sbjct: 96 EADKKWPGWPG-----ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGV 150
Query: 317 GERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADF 376
ER V ISA + D SP + V+ R + N + +LV A
Sbjct: 151 PERTVMISAKDEPDAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQ 210
Query: 377 VGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVG 436
G L G + + ++D + + +++V E + A +D V++I GE VQ AL +
Sbjct: 211 AGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIAS 268
Query: 437 RLRHNLKSGEIL 448
LR L +L
Sbjct: 269 HLRKFLVDRSVL 280
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 24/196 (12%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FRLV P VG +IGR G +I + TK R+ G G+ R++L
Sbjct: 31 KRWP-GWPGDSV-FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVL 88
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCG 132
V SG D G E+S +A++RVF+R+ + + EG C
Sbjct: 89 V--SGKED------------PGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCA 134
Query: 133 --LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITGATL 185
LL + ++GK G + ++ +GA I ++ P D+++++I G T
Sbjct: 135 ARLLVPGAQAINLIGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTE 194
Query: 186 AVKKALVAVTTCLQHL 201
V KAL AV+ L+
Sbjct: 195 KVLKALQAVSNHLRKF 210
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +++ L + A + + ER+V +S E SP
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 336 VQNAAVLVFARSVEVE--GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+A + VF R + + +G + G A ++ GA + L G + + +++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAIN-LIGKQGATIKAIQE 160
Query: 394 VTGTDIKLVGGE--QVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
TG I+++ + + ++ +++I G+ + V AL V LR L +L
Sbjct: 161 STGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVL 217
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 168/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 135
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 136 Y--------GNPENCTNACKRILEVMQQ-EAISTNKGE-----ICLKILAHNNLIGRIIG 181
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 182 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 228
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 229 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 282
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG RG+ +RS+ S A + A
Sbjct: 283 FAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIA 339
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 340 PLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDDV-R 388
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 389 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFY 448
Query: 426 NVQNA 430
+VQ+A
Sbjct: 449 SVQSA 453
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 51 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 110
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 111 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEAIST- 160
Query: 360 ENKGDAVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-- 416
NKG+ + + IL + +G + G SG++ M+D TD K+ ++ ND+
Sbjct: 161 -NKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSSINDINS 208
Query: 417 -----VIQISGEYKNVQNALSEVVGRLRHNLKS 444
+I + G +N+ A +++ +LR + ++
Sbjct: 209 FNLERIITVKGLIENMSRAENQISTKLRQSYEN 241
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
++ +R P P D V FR++ P VG +IGR G I + ++K RI G PG R
Sbjct: 102 ANDKRWP-GWPGDSV-FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPER 159
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+++ D +I S + ++R+ +R+ DG D +
Sbjct: 160 AVMISAKDEPDEQI--------------SPAMDGLLRIHKRI----------ADGSDGEF 195
Query: 131 ------------CGLLANTTKIGVVVGKGGRNVTRMRIESGA--KIVMLPPPACAAIDDQ 176
LL ++ G ++GK G + ++ S A +IV PP A DD+
Sbjct: 196 GQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSSKAVVRIVENVPP-VALNDDR 254
Query: 177 LIQITGATLAVKKALVAVTTCLQHL 201
+++I G L+V+KA+ + + L+
Sbjct: 255 VVEIQGEPLSVQKAVELIASHLRKF 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 2/173 (1%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R+L IIG++G ++ + S A I ER V ISA + D + SP
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISP 175
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
+ + + R + + + G +LV A G L G + + ++D +
Sbjct: 176 AMDGLLRIHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+++V E V A +D V++I GE +VQ A+ + LR L +L
Sbjct: 236 KAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDHSVL 286
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 168/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 145 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 193
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 194 Y--------GNPENCTNACKRILEVMQQ-EALSTNKGE-----ICLKILAHNNLIGRIIG 239
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 240 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 286
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 287 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 340
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG +G+ +RS+ S A + A
Sbjct: 341 FAMSKTPASVVPPAFPND--MQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIA 397
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 398 PLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDDVR- 446
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 447 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFY 506
Query: 426 NVQNA 430
+VQ+A
Sbjct: 507 SVQSA 511
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+PG+ GR+ + LR+L IIG++G+ +R++ S A + R
Sbjct: 131 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKE 182
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
+ +LE T + +N R +EV Q+ S+ NKG+ + + IL + +G +
Sbjct: 183 NVGSLEKSITIYGNPENCTNAC-KRILEVMQQEALST--NKGE-ICLKILAHNNLIGRII 238
Query: 382 G-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G SG++ M+D TD K+ ++ ND+ +I + G +N+ A ++
Sbjct: 239 GKSGNTIKRIMQD---TDTKIT-------VSSINDINSFNLERIITVKGLIENMSRAENQ 288
Query: 434 VVGRLRHNLKS 444
+ +LR + ++
Sbjct: 289 ISTKLRQSYEN 299
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 91/221 (41%), Gaps = 30/221 (13%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I I +TK RI G PG R ++V DR I
Sbjct: 128 FRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRPI-- 185
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAE-VEGDGDGDDVAYCGLLANTTKIGVVVG 145
+ ++RV +++ V+ + V+ LL T+ G ++G
Sbjct: 186 ------------PPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIG 233
Query: 146 KGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
K G + ++ SG I +L P A DD +++I G + V KA+ + L+
Sbjct: 234 KQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKF- 292
Query: 203 TMEKSPICFNRPIEKVFYSNSSDP----HREFFPHLSLVPP 239
+R I VF + P ++ PH + PP
Sbjct: 293 -------LVDRSIVGVFETQMQRPDVRVNQNVPPHQNWGPP 326
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 3/194 (1%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML IIG++G ++ + + A I ER V +SA E
Sbjct: 121 GWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEE 180
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D P + + V + + V+ + S G +V +LV G L G S +
Sbjct: 181 PDRPIPPAIDGLLRVHKQVINVD-RDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTI 239
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
++D +G I+++G E + A ++D +++I GE V A+ + LR L I+
Sbjct: 240 KSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIV 299
Query: 449 N--EARPRSPSGRV 460
E + + P RV
Sbjct: 300 GVFETQMQRPDVRV 313
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 168/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 128
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 129 Y--------GNPENCTNACKRILEVMQQ-EAISTNKGE-----ICLKILAHNNLIGRIIG 174
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 175 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 221
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 222 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 275
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG RG+ +RS+ S A + A
Sbjct: 276 FAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIA 332
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 333 PLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDDVR- 381
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 382 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFY 441
Query: 426 NVQNA 430
+VQ+A
Sbjct: 442 SVQSA 446
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 44 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 103
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 104 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEAIST- 153
Query: 360 ENKGDAVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-- 416
NKG+ + + IL + +G + G SG++ M+D TD K+ ++ ND+
Sbjct: 154 -NKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSSINDINS 201
Query: 417 -----VIQISGEYKNVQNALSEVVGRLRHNLKS 444
+I + G +N+ A +++ +LR + ++
Sbjct: 202 FNLERIITVKGLIENMSRAENQISTKLRQSYEN 234
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 171/425 (40%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 135
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 136 Y--------GNPENCTNACKRILEVMQQ-EANSTNKGE-----ICLKILAHNNLIGRIIG 181
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 182 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 228
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPLT--GN--------PSDNASE 250
N+ K+ S +D P FP L + ++ GN P +
Sbjct: 229 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQG 282
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A+ P QE + IIG +G+ +RS+ S A + A
Sbjct: 283 FAMSKTPANVVPPVFPND--MQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIA 339
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 340 PIDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDD-VR 388
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ + +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 389 LTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFY 448
Query: 426 NVQNA 430
+VQ+A
Sbjct: 449 SVQSA 453
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 30/191 (15%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+PG+ GR+ + LR+L IIG++G+ +R++ S A + R
Sbjct: 73 YPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKE 124
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
+ +LE T + +N R +EV Q+ S+ NKG+ + + IL + +G +
Sbjct: 125 NVGSLEKSITIYGNPENCTNAC-KRILEVMQQEANST--NKGE-ICLKILAHNNLIGRII 180
Query: 382 G-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G SG++ M+D TD K+ ++ ND+ +I + G +N+ A ++
Sbjct: 181 GKSGNTIKRIMQD---TDTKIT-------VSSINDINSFNLERIITVKGLIENMSRAENQ 230
Query: 434 VVGRLRHNLKS 444
+ +LR + ++
Sbjct: 231 ISTKLRQSYEN 241
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 26/204 (12%)
Query: 6 NPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFP 65
NP +S P D V FRL+ P VG +IGR G +I + +T+ RI
Sbjct: 43 NPEPSASTSANWPGWPGDCV-FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPI 101
Query: 66 GSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD- 124
G+ RV+L+ G ++ +S +AVIRVF+R V EG+
Sbjct: 102 GTPDRVVLISGKEDVE--------------APLSPAMDAVIRVFKR---VSGLPEGNAQE 144
Query: 125 ----GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQL 177
G + LL +T+ ++GK G + ++ +GA + +L P A D+++
Sbjct: 145 LGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQESTGASVRVLSENEVPFYVATDERI 204
Query: 178 IQITGATLAVKKALVAVTTCLQHL 201
+ + G + V +AL A+ L+
Sbjct: 205 VDLQGEAMKVLEALEAIVGHLRKF 228
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +++ + + + A I + +RVV IS E ++ SP
Sbjct: 63 FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLSP 122
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS---ILVGADFVGCLTGSGSSAVSEME 392
+A + VF R V G ++ E +A S +LV + L G S + ++
Sbjct: 123 AMDAVIRVFKR---VSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQ 179
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+ TG ++++ +V A ++ ++ + GE V AL +VG LR L +L
Sbjct: 180 ESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRKFLVDHSVL 235
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 136/362 (37%), Gaps = 80/362 (22%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
++R P P + V FR++ P VG +IGR G +I I +T+ RI G PG+ R +
Sbjct: 168 EKRWP-GWPGETV-FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAV 225
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDDVAYC 131
+V G + + + + ++RV R+ V+G DG+
Sbjct: 226 MVSGKEEPESSL--------------PPSMDGLLRVHMRI------VDGLDGEPSQAPPA 265
Query: 132 G-----LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGA 183
LL ++ G ++GK G V ++ S + +L P A DD+++++ G
Sbjct: 266 SKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGE 325
Query: 184 TLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF----FPHLSLVPP 239
+V KAL + + L+ +R I F + P R+ PH + PP
Sbjct: 326 PTSVHKALELIASHLRKF--------LVDRSIIPFFENQMQKPTRQMDHMPAPHQAWGPP 377
Query: 240 LTGNPSDNASEF-------------HSSSADA---------DRDHPGLDKKGRK------ 271
PS + H S + H G+ GR+
Sbjct: 378 QGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVH 437
Query: 272 ---------QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
Q+V +M A +IG G+ + + SGA ++ GE V
Sbjct: 438 VSSAPPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVE 497
Query: 323 IS 324
+S
Sbjct: 498 VS 499
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
E RML IIG++G +++ + + A I + ER V +S E ++
Sbjct: 177 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 236
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
P + + V R V+ G G S V+ +LV A G L G V ++
Sbjct: 237 LPPSMDGLLRVHMRIVD--GLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQ 294
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ + ++++G E + A Q+D V+++ GE +V AL + LR L
Sbjct: 295 EASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFL 344
>gi|358343600|ref|XP_003635888.1| Poly(rC)-binding protein [Medicago truncatula]
gi|358344098|ref|XP_003636130.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355501823|gb|AES83026.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355502065|gb|AES83268.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 241
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 47/66 (71%)
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
A+++++G +VGKGG+N++ +R SG+ I + P P CAA D++LI ITG ++ AL +
Sbjct: 26 AHSSQVGAIVGKGGKNISNIRNNSGSNIRVCPAPHCAAKDEELILITGGYRCIENALRKI 85
Query: 195 TTCLQH 200
T+ +++
Sbjct: 86 TSIIRN 91
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 377 VGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVG 436
VG + G G +S + + +G++I++ CAA+++ +I I+G Y+ ++NAL ++
Sbjct: 31 VGAIVGKGGKNISNIRNNSGSNIRVCPAPH---CAAKDEELILITGGYRCIENALRKITS 87
Query: 437 RLRHNLKSGEILNEAR 452
+R+N + E+L EAR
Sbjct: 88 IIRNNPLTNEVLAEAR 103
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
++R P P D V FRL+ P VG +IGR G +I + +T+ RI G+ R++
Sbjct: 43 EKRWP-GWPGDCV-FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIV 100
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERM---WEVEAEVEGDGDGDDVA 129
LV G + +S +AV+R+F+R+ E +AE + G +
Sbjct: 101 LVSGKEDPE--------------AALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAFS 146
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC---AAIDDQLIQITGATLA 186
LL +T+ ++GK G + ++ + A + +L A ++++++I G L
Sbjct: 147 SIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALK 206
Query: 187 VKKALVAVTTCLQHL 201
V KAL AV L+
Sbjct: 207 VLKALEAVVGHLRKF 221
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALIS-FAAPLTKSGERVVTISALEYLDTRHS 334
R++ IIG++G +++ + + + I APL + +R+V +S E + S
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPL-GTPDRIVLVSGKEDPEAALS 113
Query: 335 PVQNAAVLVFARSVEVEGQQGFSS--GENKGDAV-----AVSILVGADFVGCLTGSGSSA 387
P +A V +F R GFS EN+ A ++ +LV + L G S
Sbjct: 114 PAMDAVVRIFKRV------SGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSL 167
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEI 447
+ +++ T ++++ G++V A N+ +++I GE V AL VVG LR L +
Sbjct: 168 IKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVDHSV 227
Query: 448 L 448
L
Sbjct: 228 L 228
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 175/422 (41%), Gaps = 58/422 (13%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI--HCEGGFPGSDHRVILVVGSGSIDRRI 84
R++ + +VG +IGR GS I I + ++ R+ H + GS + I + G+ D
Sbjct: 145 LRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNV-GSLEKAITIYGNP--DNCT 201
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY---CGLLANTTKIG 141
C+ + V E ++T + + D G +Y +LA+ IG
Sbjct: 202 NACKKILEVMQQEANNTNKGY----------DEGSNSDDHGAVNSYEITLKILAHNNLIG 251
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVAVTTCLQH 200
++GKGG + R+ ++ KI + + + +++I + G + KA +++ L+
Sbjct: 252 RIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERIITVKGTIENMSKAESMISSKLRQ 311
Query: 201 -----LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSS 255
L M + F S + + S P L G S A + SS
Sbjct: 312 SYENDLQAMAPQSMMFPGLHPMAMMSTAG------MGYSSRGPGLYG--SGPAPYPYQSS 363
Query: 256 ADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA----- 310
+ P D QE + + IIG +G+ +R++ SGA + A
Sbjct: 364 LQTQQGVPASDT----QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQD 418
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSSGENKGDAVAV 368
P + ER VTI SP A L+F + E +G+ SG + + +
Sbjct: 419 KPAEQQTERKVTIVG--------SPESQWKAQYLIFEKMRE----EGYVSG-TEDVRLTI 465
Query: 369 SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQ 428
ILV + VG + G G V E++ VTG+ IKL +Q +A + + I G + +VQ
Sbjct: 466 EILVPSAQVGRIIGKGGQNVRELQRVTGSVIKL-SEQQATPPSADEETTVHIIGPFFSVQ 524
Query: 429 NA 430
+A
Sbjct: 525 SA 526
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 24/189 (12%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y S + +P D + L P VG +IG GS I +I R F
Sbjct: 357 PYPYQSSLQTQQGVPASDTQETTFLYIPNNSVGAIIGTKGSHIRNIIR-----------F 405
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
G+ ++ + +++ E V + G S +A +FE+M E E V G
Sbjct: 406 SGASVKIAPLEQDKPAEQQ---TERKVTIVGSP-ESQWKAQYLIFEKMRE-EGYVSGT-- 458
Query: 125 GDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQIT 181
+DV +L + ++G ++GKGG+NV ++ +G+ I + A +A ++ + I
Sbjct: 459 -EDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSADEETTVHII 517
Query: 182 GATLAVKKA 190
G +V+ A
Sbjct: 518 GPFFSVQSA 526
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 90/225 (40%), Gaps = 44/225 (19%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
GL GR+ + LR+L IIG++G+ +R + S A + R +
Sbjct: 133 GLPGSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDV--------HRKDNV 184
Query: 324 SALEYLDTRHSPVQN-----AAVLVFARSVEVEGQQGFSSGENKGDAVAVS-------IL 371
+LE T + N +L + +G+ G N D AV+ IL
Sbjct: 185 GSLEKAITIYGNPDNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKIL 244
Query: 372 VGADFVGCLTGSGSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGE 423
+ +G + G G + + M+D TD K+ ++ ND+ +I + G
Sbjct: 245 AHNNLIGRIIGKGGNTIKRIMQD---TDTKIT-------VSSINDINSFNLERIITVKGT 294
Query: 424 YKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPALHKL 468
+N+ A S + +LR + + N+ + +P + P LH +
Sbjct: 295 IENMSKAESMISSKLRQSYE-----NDLQAMAPQSMM-FPGLHPM 333
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 177/429 (41%), Gaps = 87/429 (20%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR G+ I I + T+ R+ HR V GS+++ I
Sbjct: 116 LRILVQSDMVGAIIGRQGTTIRQITQQTRARVDV--------HRKDNV---GSLEKAITI 164
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A ++ E M +AE G+ +LA+ IG ++GK
Sbjct: 165 Y--------GNPDNCTNACKKILEVM---QAEASNTNKGE--ISLKILAHNNLIGRIIGK 211
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GG + R+ ++ +KI + ++I+D I L + ++ V + ++S E
Sbjct: 212 GGNTIKRIMQDTDSKITV------SSIND----INSFNL---ERIITVKGTIDNMSRAE- 257
Query: 207 SPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPLTGNPSDNASE------FHSSS 255
S I K+ S +D P FP L + ++ N +S + S
Sbjct: 258 SEIS-----AKLRQSYENDLQAMAPQTMMFPGLHPMAMMSTNNMGYSSRPGAFGGVYGSG 312
Query: 256 ADADRD--------HPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGAL 306
A G + G QE LF +A G IIG +G +R++ SGA
Sbjct: 313 APIPYSPIYPPAGPQQGPSQGGDSQETTF--LFIPNSAVGAIIGTKGTHIRNIIRFSGAS 370
Query: 307 ISFAAPLTKSG-----ERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGEN 361
+ A+ + G ER VTI + T S + A L+F + E +GF N
Sbjct: 371 VKIASLEQEKGTEPPAERKVTI-----VGTPESQWK-AQYLIFEKMRE----EGFIGSGN 420
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQIS 421
+ V ILVG + G G V E++ TG+ IKL EQ AQ + + I
Sbjct: 421 DDVKLTVEILVGR-----IIGKGGQNVRELQHATGSIIKL--PEQGAAPPAQEETTVHII 473
Query: 422 GEYKNVQNA 430
G + +VQ+A
Sbjct: 474 GPFFSVQSA 482
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 37/194 (19%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC------EGGFPGS 67
++GP D + L P VG +IG G+ I +I R + + +G P +
Sbjct: 327 QQGPSQGGDSQETTFLFIPNSAVGAIIGTKGTHIRNIIRFSGASVKIASLEQEKGTEPPA 386
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDD 127
+ +V +V G S +A +FE+M E E + G G+ DD
Sbjct: 387 ERKVTIV---------------------GTPESQWKAQYLIFEKMRE-EGFI-GSGN-DD 422
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACA--AIDDQLIQITGATL 185
V L +G ++GKGG+NV ++ +G+ I+ LP A A ++ + I G
Sbjct: 423 VK----LTVEILVGRIIGKGGQNVRELQHATGS-IIKLPEQGAAPPAQEETTVHIIGPFF 477
Query: 186 AVKKALVAVTTCLQ 199
+V+ A + + +Q
Sbjct: 478 SVQSAQRRIRSMVQ 491
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 182/447 (40%), Gaps = 71/447 (15%)
Query: 1 MMHHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIR--RDTKCRI 58
+ + +P+G+ + RG + P +++ P VVG +IG+ GS + I +D++ R+
Sbjct: 21 WIKNPSPFGFGA--RGSPDTP-----LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARV 73
Query: 59 --HCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVE 116
H G PGSD V G + A IR+ E + + E
Sbjct: 74 DVHRREG-PGSD---------------------KVATIYGAPEACGAAAIRILEIVRKEE 111
Query: 117 AEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-D 175
D+ +LA+ IG ++G+ GRN+ ++ ++G +I + + + D
Sbjct: 112 K--------DNELPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELSPYNMD 163
Query: 176 QLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL- 234
+ I I G + +A +T L+ T + + + ++ Y + + FP L
Sbjct: 164 RTISIHGEVKGISEAEQQITEKLRQFET-DMAAMS-----QQSLYPGLNSQQMQMFPGLQ 217
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
S P N S S F + + + G QE ++ SG IIG RG
Sbjct: 218 SPTAPPAYNVSYQGSYFFKNVSQSV-FFSGNSSSNNTQETVTLLIPSG-AVGAIIGSRGT 275
Query: 295 IVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQ 354
+R++ +GA I + + VTI + + A +F + ++ EG
Sbjct: 276 HIRNISRIAGASIRIHVNADRDAKARVTIVGVPESQWK------AQFCIFDK-LKQEGWF 328
Query: 355 GFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL-VGGEQVLGCAAQ 413
G G + I + VG + G G V E++ +T +++ + GE
Sbjct: 329 GNEEGR-----LTTQITIPGKLVGRIIGKGGVNVRELQRITSSEVTIPRQGE----LNTS 379
Query: 414 NDVVIQISGEY---KNVQNALSEVVGR 437
++ + I+G + ++ Q + ++VGR
Sbjct: 380 EEIPVSITGTFFSNQSAQRKIRDLVGR 406
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 129/348 (37%), Gaps = 78/348 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G +I I +T+ RI G PG+ R ++V G + +
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSL-- 246
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDDVA-----YCGLLANTTKI 140
+ + ++RV R+ V+G DG+ LL ++
Sbjct: 247 ------------PPSMDGLLRVHMRI------VDGLDGEASQAPPPSKVSTRLLVPASQA 288
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G V ++ S + +L P A DD+++++ G +V +AL + +
Sbjct: 289 GSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASH 348
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF----FPHLSLVPPLTGNPSDNASEF-- 251
L+ +R I F + P R+ PH S PP PS +
Sbjct: 349 LRKF--------LVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGH 400
Query: 252 -----------HSSSADA---------DRDHPGLDKKGRK---------------QEVAL 276
H S + H G+ GR+ Q+V
Sbjct: 401 NPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQ 460
Query: 277 RMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
+M A +IG G+ + + SGA ++ GE V +S
Sbjct: 461 QMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVS 508
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 2/170 (1%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
E RML IIG++G +++ + + A I + ER V +S E ++
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
P + + V R V+ G G +S V+ +LV A G L G V ++
Sbjct: 246 LPPSMDGLLRVHMRIVD--GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQ 303
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ + ++++G E + A Q+D V+++ GE +V AL + LR L
Sbjct: 304 EASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFL 353
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 129/348 (37%), Gaps = 78/348 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G +I I +T+ RI G PG+ R ++V G + +
Sbjct: 189 FRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSL-- 246
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDDVA-----YCGLLANTTKI 140
+ + ++RV R+ V+G DG+ LL ++
Sbjct: 247 ------------PPSMDGLLRVHMRI------VDGLDGEASQAPPPSKVSTRLLVPASQA 288
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G V ++ S + +L P A DD+++++ G +V +AL + +
Sbjct: 289 GSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASH 348
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREF----FPHLSLVPPLTGNPSDNASEF-- 251
L+ +R I F + P R+ PH S PP PS +
Sbjct: 349 LRKF--------LVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGH 400
Query: 252 -----------HSSSADA---------DRDHPGLDKKGRK---------------QEVAL 276
H S + H G+ GR+ Q+V
Sbjct: 401 NPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQ 460
Query: 277 RMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
+M A +IG G+ + + SGA ++ GE V +S
Sbjct: 461 QMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVS 508
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
E RML IIG++G +++ + + A I + ER V +S E ++
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
P + + V R V+ G G +S V+ +LV A G L G V ++
Sbjct: 246 LPPSMDGLLRVHMRIVD--GLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQ 303
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+ + ++++G E + A Q+D V+++ GE +V AL + LR L I+
Sbjct: 304 EASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSII 359
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 168/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 129
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 130 Y--------GNPENCTNACKRILEVMQQ-EALSTNKGE-----ICLKILAHNNLIGRIIG 175
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 176 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 222
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 223 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 276
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG +G+ +RS+ S A + A
Sbjct: 277 FAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIA 333
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 334 PLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDDVR- 382
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 383 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFY 442
Query: 426 NVQNA 430
+VQ+A
Sbjct: 443 SVQSA 447
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 45 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 104
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 105 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTNAC-KRILEVMQQEALST- 154
Query: 360 ENKGDAVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-- 416
NKG+ + + IL + +G + G SG++ M+D TD K+ ++ ND+
Sbjct: 155 -NKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSSINDINS 202
Query: 417 -----VIQISGEYKNVQNALSEVVGRLRHNLKS 444
+I + G +N+ A +++ +LR + ++
Sbjct: 203 FNLERIITVKGLIENMSRAENQISTKLRQSYEN 235
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 168/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 81 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 129
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 130 Y--------GNPENCTNACKRILEVMQQ-EALSTNKGE-----ICLKILAHNNLIGRIIG 175
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 176 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 222
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 223 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 276
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG +G+ +RS+ S A + A
Sbjct: 277 FAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIA 333
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 334 PLDADKPLDQQTERKVTIVGTPEGQWK------AQFMIFEKMRE----EGFMCGTDDVR- 382
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 383 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFY 442
Query: 426 NVQNA 430
+VQ+A
Sbjct: 443 SVQSA 447
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 45 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 104
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 105 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTNAC-KRILEVMQQEALST- 154
Query: 360 ENKGDAVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-- 416
NKG+ + + IL + +G + G SG++ M+D TD K+ ++ ND+
Sbjct: 155 -NKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSSINDINS 202
Query: 417 -----VIQISGEYKNVQNALSEVVGRLRHNLKS 444
+I + G +N+ A +++ +LR + ++
Sbjct: 203 FNLERIITVKGLIENMSRAENQISTKLRQSYEN 235
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 129/354 (36%), Gaps = 83/354 (23%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I I +TK RI G PG R ++V D
Sbjct: 127 FRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPD----- 181
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG------LLANTTKI 140
C V+G ++RV +++ V+ ++ D G LL T+
Sbjct: 182 CPIPPAVDG---------LLRVHKQVINVDRDL-----ADSALAAGRSVVTRLLVADTQA 227
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G + ++ SG I +L P A DD +++I G + V KA+ +
Sbjct: 228 GSLIGKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVH 287
Query: 198 LQHL-----------STMEKSPICFNR--PIEKVF------------------------- 219
L+ + M+ S + N+ P + +
Sbjct: 288 LRKFLVDRSIVGVFETQMQMSDVRVNQNLPPHQNWGPPPQGFPAPAGGGGGGGPAFAPNH 347
Query: 220 -YSNSSDPHREFFPHLSLVP--------PLTGNPSDNASEFHSSSADADRDHPGLDKKGR 270
Y S + ++P L P P D + HSSSA ++
Sbjct: 348 QYMPPSHHYDSYYPPTELPPMDKHLHQGPPPAYARDASMGIHSSSAQP--------QQSV 399
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
+V M A +IG G + ++ ASGA I+ GE V IS
Sbjct: 400 VTKVTQHMQIPLTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEIS 453
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 21/236 (8%)
Query: 226 PHREFFPHLSLVPPLTGN----PSDNASEFHSSSADADRDHPGLDKKGRK---------- 271
P +F H V L G+ P ++ E H + D D L K+G +
Sbjct: 59 PENDFVGHEHDVGGLAGDADSPPEEHVEEVHGA-GDVPEDFDSLPKQGSEIDSKGNEIKK 117
Query: 272 -----QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
E RML IIG++G ++ + + A I ER V +SA
Sbjct: 118 WPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAK 177
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
E D P + + V + + V+ + S G +V +LV G L G S
Sbjct: 178 EEPDCPIPPAVDGLLRVHKQVINVD-RDLADSALAAGRSVVTRLLVADTQAGSLIGKQGS 236
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ ++D +G I+++G E + A ++D +++I GE V A+ + LR L
Sbjct: 237 TIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFL 292
>gi|313240346|emb|CBY32688.1| unnamed protein product [Oikopleura dioica]
Length = 568
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 177/442 (40%), Gaps = 71/442 (16%)
Query: 6 NPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIR--RDTKCRI--HCE 61
+P+G+ + RG + P +++ P VVG +IG+ GS + I +D++ R+ H
Sbjct: 182 SPFGFGA--RGSPDTP-----LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRR 234
Query: 62 GGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
G PGSD V G + A IR+ E + + E
Sbjct: 235 EG-PGSDK---------------------VATIYGAPEACGAAAIRILEIVRKEEK---- 268
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQI 180
D+ +LA+ IG ++G+ GRN+ ++ ++G +I + + + D+ I I
Sbjct: 269 ----DNELPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELSPYNMDRTISI 324
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL-SLVPP 239
G + +A +T L+ T + + + ++ Y + + FP L S P
Sbjct: 325 HGEVKGISEAEQQITEKLRQFET-DMAAMS-----QQSLYPGLNSQQMQMFPGLQSPTAP 378
Query: 240 LTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
N S S F + + + G QE ++ SG IIG RG +R++
Sbjct: 379 PAYNVSYQGSYFFKNVSQSVF-FSGNSSSNNTQETVTLLIPSG-AVGAIIGSRGTHIRNI 436
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
+GA I + + VTI + Q A ++ EG G G
Sbjct: 437 SRIAGASIRIHVNADRDAKARVTIVGV-------PESQWKAQFCIFDKLKQEGWFGNEEG 489
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL-VGGEQVLGCAAQNDVVI 418
+ I + VG + G G V E++ +T +++ + GE ++ +
Sbjct: 490 R-----LTTQITIPGKLVGRIIGKGGVNVRELQRITSSEVTIPRQGE----LNTSEEIPV 540
Query: 419 QISGEY---KNVQNALSEVVGR 437
I+G + ++ Q + ++VGR
Sbjct: 541 SITGTFFSNQSAQRKIRDLVGR 562
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 170/435 (39%), Gaps = 82/435 (18%)
Query: 15 RGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV 74
+GP PD R++ + +VG +IGR G I I + T+ R+ HR V
Sbjct: 3 QGPQRQPD--FPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDV--------HRKENV 52
Query: 75 VGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLL 134
GS+++ I N + A RV E M + E D +L
Sbjct: 53 ---GSLEKAITIYGNP--------ENCTNACRRVLEVMQQ-----EADNTNKGEISLKIL 96
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVA 193
A+ IG ++GKGG + R+ +E+ KI + ++ + +++I I G + +A
Sbjct: 97 AHNNLIGRIIGKGGSTIKRVMLETETKITVSSLNDVSSFNMERVITIKGTIDNMSRAEGM 156
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL-----------SLVPPLTG 242
++ L+ + ++ + P FP L P + G
Sbjct: 157 ISAKLRQ---------SYESDLQAM------APQSMMFPGLHPMAMMSTVGMGFSPSVRG 201
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQN 301
P A + A A G G L+ +A G IIG RG+ +R++
Sbjct: 202 TPPAAAPGMYPPGA-APYAQAGPAGVGETS-----FLYIPNSAVGAIIGTRGSHIRNIIR 255
Query: 302 ASGALISFAA-----PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
SGA + + ER VTI + A L+F + E +GF
Sbjct: 256 FSGASVKITSLPEGTTAEPQAERKVTIVGTPEAQWK------AQYLIFEKMRE----EGF 305
Query: 357 -SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND 415
+GE+ + V +LV + VG + G G V EM+ T + IKL EQ G + +
Sbjct: 306 MPAGEDV--RLTVELLVASSQVGRIIGKGGQNVREMQRTTSSVIKLP--EQ--GASTGEE 359
Query: 416 VVIQISGEYKNVQNA 430
+ I G + VQ+A
Sbjct: 360 TTVHIIGNFFAVQSA 374
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +TK RI G PG R +++ D
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPD----- 177
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD-------DVAYCGLLANTTK 139
+S + ++RV +R+ + DG+ ++ LL +++
Sbjct: 178 ---------APLSPAMDGLLRVHKRITD-----SSDGESSQPQRSAGNIGPTRLLVPSSQ 223
Query: 140 IGVVVGKGGRNVTRMRIESGA--KIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G + ++ S + +IV PP A DD++++I G L V+KA+ +++
Sbjct: 224 AGSLIGKQGATIKSIQDSSKSIVRIVENVPP-VALNDDRVVEIQGEPLGVQKAVELISSH 282
Query: 198 LQHL 201
L+
Sbjct: 283 LRKF 286
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 103/257 (40%), Gaps = 26/257 (10%)
Query: 211 FNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN-----PSDNASEFHSSSADADRDHPGL 265
+N + S +P+ ++ +L TGN P+D+ E H ++ G+
Sbjct: 44 YNEQPRAQYDEGSGNPYNDYEEQANLYSEETGNQYNEDPADSYQEEHENAFSG-----GI 98
Query: 266 DKKGRKQ--------------EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
+++G Q E R+L IIG++G ++ + + A I
Sbjct: 99 NQQGNLQVNNVDDNIWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILD 158
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSIL 371
ER V ISA + D SP + + V R + + + G+ +L
Sbjct: 159 GPPGVPERAVMISAKDEPDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLL 218
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNAL 431
V + G L G + + ++D + + +++V E V A +D V++I GE VQ A+
Sbjct: 219 VPSSQAGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAV 276
Query: 432 SEVVGRLRHNLKSGEIL 448
+ LR L +L
Sbjct: 277 ELISSHLRKFLVDRSVL 293
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FRLV P VG +IGR G +I + +TK R+ G G+ R++L
Sbjct: 37 KRWP-GWPGDSV-FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL 94
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD------D 127
V G D E+ +A++RVF+R V +G +G D
Sbjct: 95 VSGKEDPDL--------------ELPPAMDALMRVFKR---VTGITDGAAEGTQAAATPD 137
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITG 182
V LL + ++GK G + ++ + A I ++ P D+++++I G
Sbjct: 138 VCAARLLVPGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQG 197
Query: 183 ATLAVKKALVAVTTCLQHL 201
T V KAL AV+ L+
Sbjct: 198 DTEKVLKALQAVSNHLRKF 216
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +++ L + A + + ER+V +S E D P
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 336 VQNAAVLVFARSVEV-EGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
+A + VF R + +G + D A +LV L G + + +++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 395 TGTDIKLVGGE--QVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
T I+++ + + ++ +++I G+ + V AL V LR L +L
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVL 223
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FR+V P+ +G +IG+ G I IR T+ I + RVI++
Sbjct: 100 VIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSK------- 152
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI---- 140
+ND +V E + Q A + + E D + + ANT ++
Sbjct: 153 ---DNDEMVTDAEKALEQIANL--------ILKEDNSSFDASKLTAGHVAANTIRLLIAG 201
Query: 141 ---GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATLAVKKALV 192
G ++G G+N+ ++R SGA I +L P P CA+ D+++Q++G V KAL
Sbjct: 202 SQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALE 261
Query: 193 AVTTCLQHLSTM 204
+ L+ +S +
Sbjct: 262 EIGCQLRSVSEL 273
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
K+ + Q+V R++ +IGK G ++ ++ + A I A + + ERV+ IS+
Sbjct: 93 KRAKGQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSK 152
Query: 327 ---EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA---VSILVGADFVGCL 380
E + ++ A L+ E F + + VA + +L+ G L
Sbjct: 153 DNDEMVTDAEKALEQIANLILK-----EDNSSFDASKLTAGHVAANTIRLLIAGSQAGGL 207
Query: 381 TGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA--QNDVVIQISGEYKNVQNALSEVVGRL 438
G + ++ + +G I ++ Q+ CA+ ++D V+Q+SG+ V AL E+ +L
Sbjct: 208 IGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQL 267
Query: 439 R 439
R
Sbjct: 268 R 268
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FRLV P VG +IGR G +I + +TK R+ G G+ R++L
Sbjct: 37 KRWP-GWPGDSV-FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL 94
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD------D 127
V G D E+ +A++RVF+R V +G +G D
Sbjct: 95 VSGKEDPDL--------------ELPPAMDALMRVFKR---VTGITDGAAEGTQAAATPD 137
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITG 182
V LL + ++GK G + ++ + A I ++ P D+++++I G
Sbjct: 138 VCAARLLVPGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQG 197
Query: 183 ATLAVKKALVAVTTCLQHL 201
T V KAL AV+ L+
Sbjct: 198 DTEKVLKALQAVSNHLRKF 216
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 73/176 (41%), Gaps = 3/176 (1%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +++ L + A + + ER+V +S E D P
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 336 VQNAAVLVFARSVEV-EGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
+A + VF R + +G + D A +LV L G + + +++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 395 TGTDIKLVGGE--QVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
T I+++ + + ++ +++I G+ + V AL V LR L +L
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVDHSVL 223
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 168/425 (39%), Gaps = 79/425 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 80 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 128
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A R+ E M + EA G+ C +LA+ IG ++G
Sbjct: 129 Y--------GNPENCTNACKRILEVMQQ-EAISTNKGE-----ICLKILAHNNLIGRIIG 174
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 175 KSGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE 221
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASE 250
N+ K+ S +D P FP L + + T P +
Sbjct: 222 ------NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQS 275
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
F S A P QE + IIG +G+ +RS+ S A + A
Sbjct: 276 FAMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIA 332
Query: 311 -----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
PL + ER VTI + A ++F + E +GF G +
Sbjct: 333 PLDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDDVR- 381
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ V +LV + VG + G G V E++ VTG+ IKL + + I G +
Sbjct: 382 LTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFY 441
Query: 426 NVQNA 430
+VQ+A
Sbjct: 442 SVQSA 446
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 39/213 (18%)
Query: 249 SEFHSSSADADR---------DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
S+ H+ D ++ +PG+ GR+ + LR+L IIG++G+ +R++
Sbjct: 44 SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTI 103
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
S A + R + +LE T + +N R +EV Q+ S+
Sbjct: 104 TQQSRARVDV--------HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEAIST- 153
Query: 360 ENKGDAVAVSILVGADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-- 416
NKG+ + + IL + +G + G SG++ M+D TD K+ ++ ND+
Sbjct: 154 -NKGE-ICLKILAHNNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSSINDINS 201
Query: 417 -----VIQISGEYKNVQNALSEVVGRLRHNLKS 444
+I + G +N+ A +++ +LR + ++
Sbjct: 202 FNLERIITVKGLIENMSRAENQISTKLRQSYEN 234
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 196/475 (41%), Gaps = 84/475 (17%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
YSS R + P R++ PT VG +IG+ G I ++ + T+ ++ H
Sbjct: 178 YSSPRPRQQDFP-----LRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDI--------H 224
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA 129
R +G+ ++ I + ST E + ++ + + ++
Sbjct: 225 RK---ENAGAAEKPIT------------IHSTPEGCSSACRMILDIMQKEANETKTNEEI 269
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKK 189
+LA+ + +G ++GK GRN+ ++ E+G KI + +++ D I T+ VK
Sbjct: 270 PLKILAHNSLVGRLIGKEGRNLKKIEEETGTKITI------SSLQDLTICNPERTITVKG 323
Query: 190 ALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTGN 243
+L A C + M+K + I + + P F L ++PP G+
Sbjct: 324 SLEAC--CKAEVEIMKKLKEAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGS 381
Query: 244 -------PSDNASEF--HSSSADADRDHPGL-------DKKGRKQEVALRMLFSGWTASG 287
P + F HSS P ++ +QEV LF A G
Sbjct: 382 RGAVPPMPPAGYNPFLSHSSHLSGLYGVPPTSAIPHQHSQQAPEQEVV--YLFIPTQAVG 439
Query: 288 -IIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFA 345
+IGK+G ++ L + +GA I A A ER+V I+ + A +F
Sbjct: 440 ALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFK------AQGRIFG 493
Query: 346 RSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGE 405
+ E + FS+ E + I V + G + G G V+E++++T ++ +V +
Sbjct: 494 KLKE---ENFFSAKEEV--KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRD 547
Query: 406 QVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLRHNLKSGEILNEARPRSP 456
Q+ +ND V ++ISG + + Q + E++ +++ + + + P SP
Sbjct: 548 QI---PDENDEVFVKISGHFFASQTAQRKIREIIQQVKQQEQKHQ---QGPPESP 596
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 24/189 (12%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D V +RL+ P VG +IGR G +I + +T+ RI G P R++L+ G
Sbjct: 24 PGDNV-YRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEP 82
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLA 135
+ +S +AV+RVF+R+ + A E D G VA LL
Sbjct: 83 E--------------AALSPAMDAVLRVFKRVSGLSAG-EADAMGSAVAGAAFSSVKLLV 127
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALV 192
+++ ++GK G + ++ + A + +L P+ A D+++++I G V KAL
Sbjct: 128 ASSQAINLIGKQGSTIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALE 187
Query: 193 AVTTCLQHL 201
V L+
Sbjct: 188 GVIGQLRKF 196
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IIG++G +++ + + A I +R+V IS E + SP +A + VF R
Sbjct: 41 IIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALSPAMDAVLRVFKRV 100
Query: 348 VEVEGQQGFSSGENK--GDAVA------VSILVGADFVGCLTGSGSSAVSEMEDVTGTDI 399
G S+GE G AVA V +LV + L G S + +++ T +
Sbjct: 101 ------SGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQGSTIKSIQESTAATV 154
Query: 400 KLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ E+ A ++ +++I GE V AL V+G+LR L
Sbjct: 155 RVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLRKFL 197
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
E RML IIG++G ++ + + A I + ER V +SA + D+
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 333 HSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
P + + V R V+ +EG + N G V+ +LV A G L G V +
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAP--NAGSKVSTRLLVAASQAGSLIGKQGGTVKSI 201
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
++ + ++++G E + A Q+D V+++ G+ V A+ + LR L I+
Sbjct: 202 QEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSII 258
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 40/231 (17%)
Query: 2 MHHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE 61
+H +P S+++ P P + V FR++ P VG +IGR G I I +T+ RI
Sbjct: 64 VHIEDPLTVVSEKKWP-GWPGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 121
Query: 62 GGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
G PG+ R ++V D V+G ++RV +R+ V+G
Sbjct: 122 DGPPGTAERAVMVSAKDEPDSAF-----PPAVDG---------LLRVHKRI------VDG 161
Query: 122 -DGDGDDVAYCG------LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACA 171
+GD G LL ++ G ++GK G V ++ ES + +L P A
Sbjct: 162 LEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA 221
Query: 172 AIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSN 222
DD+++++ G V KA+ + + L+ +R I VF N
Sbjct: 222 LQDDRVVEVLGDPAGVHKAVELIASHLRKF--------LVDRSIIPVFEMN 264
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 63 DTTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E ++++ ++ +VE++ + D +L +
Sbjct: 123 EAIMVVMEFIMDKIREKPDLTN----------KIVDVESKQTQERD----RQVKILVPNS 168
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GKGG + +++ ESG+ + + P ++ ++ I I G K A C
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CK 222
Query: 199 QHLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSS 254
LS + + P C N V Y++ S P F P TG+P + N +SS
Sbjct: 223 MILSKIVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQIAINSS 269
Query: 255 SA 256
+A
Sbjct: 270 TA 271
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 130/310 (41%), Gaps = 54/310 (17%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+ S RLVCP +GG+I + G I+ IRR++ I + ++ + + R
Sbjct: 42 IFSLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILA---KER 98
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ F G +S + R+ R+W+ LL + +IG V
Sbjct: 99 LHF-------PRGPQTSHCIFLYRMCMRLWDWNCP-------SGTFTVRLLVSFNQIGCV 144
Query: 144 VGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
+GKGG+ + +R ESGA+I +L P+C+ ++LIQI+ V+K L + + L
Sbjct: 145 IGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLH- 203
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
+P R + +VP G S + +S A
Sbjct: 204 -----------------------DNPSRSQHLFVYVVP--IGYSSSGSLMGLTSGA---- 234
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF-AAPLTKSGER 319
P +D+ K E +L ++ G+IGK I+ ++ GA I + + ++ +
Sbjct: 235 --PIMDEASSK-EFSLCLVCPIGNIGGMIGKGDVIINQIRQEFGATIKVDSTSVVEANDC 291
Query: 320 VVTISALEYL 329
+VTISA E L
Sbjct: 292 LVTISAKERL 301
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF-AAPLTKSGERVVTISALEYLDTRH 333
+LR++ G+I K G + ++ SGA+I + ++ + +VTI A E L
Sbjct: 44 SLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFPR 103
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
P + + ++ + + S V +LV + +GC+ G G + +
Sbjct: 104 GPQTSHCIFLYRMCMRLWDWNCPSG------TFTVRLLVSFNQIGCVIGKGGQIIQSIRS 157
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
+G I+++ + + C+ ++ +IQIS E V+ L ++ RL N
Sbjct: 158 ESGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDN 205
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
E RML IIG++G ++ + + A I + ER V +SA + D+
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 333 HSPVQNAAVLVFARSVE-VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEM 391
P + + V R V+ +EG + N G V+ +LV A G L G V +
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAP--NAGSKVSTRLLVAASQAGSLIGKQGGTVKSI 201
Query: 392 EDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
++ + ++++G E + A Q+D V+++ G+ V A+ + LR L I+
Sbjct: 202 QEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRSII 258
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 2 MHHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE 61
+H +P S+++ P P + V FR++ P VG +IGR G I I +T+ RI
Sbjct: 64 VHIEDPLTVVSEKKWP-GWPGESV-FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 121
Query: 62 GGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
G PG+ R ++V D V+G ++RV +R+ V+G
Sbjct: 122 DGPPGTAERAVMVSAKDEPDSAF-----PPAVDG---------LLRVHKRI------VDG 161
Query: 122 -DGDGDDVAYCG------LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACA 171
+GD G LL ++ G ++GK G V ++ ES + +L P A
Sbjct: 162 LEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFA 221
Query: 172 AIDDQLIQITGATLAVKKALVAVTTCLQHL 201
DD+++++ G V KA+ + + L+
Sbjct: 222 LQDDRVVEVLGDPAGVHKAVELIASHLRKF 251
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +TK RI G PG R +++ D
Sbjct: 123 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPD----- 177
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG--DGDGDDVAYCGLLANTTKIGVVV 144
+S + ++RV +R+ + G ++ LL +++ G ++
Sbjct: 178 ---------APLSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLI 228
Query: 145 GKGGRNVTRMRIESGA--KIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
GK G + ++ S + +IV PP A DD++++I G L V+KA+ + + L+
Sbjct: 229 GKQGATIKSIQDSSKSVVRIVENVPP-VALNDDRVVEIQGEPLGVQKAVELIASHLRKF 286
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 7/209 (3%)
Query: 240 LTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
+G+P D A + +S + D D G E R+L IIG++G ++ +
Sbjct: 92 FSGDP-DMAQKDNSQVNNVDDDK----WPGWPGESVFRILVPAQKVGAIIGRKGEFIKKM 146
Query: 300 QNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
+ A I ER V ISA + D SP + + V R + +
Sbjct: 147 CEETKARIKILDGPPGVPERAVMISAKDEPDAPLSPAVDGLLRVHKRITDSSNGESGQLQ 206
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
+ G+ +LV + G L G + + ++D + + +++V E V A +D V++
Sbjct: 207 RSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVE 264
Query: 420 ISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
I GE VQ A+ + LR L +L
Sbjct: 265 IQGEPLGVQKAVELIASHLRKFLVDRSVL 293
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 168/425 (39%), Gaps = 85/425 (20%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
RL+ + +VG +IGR GS I I ++++ R+ HR V GS+++ I
Sbjct: 128 LRLLVASEMVGAIIGRQGSTIRQITQNSRARVDV--------HRKDNV---GSLEKAITI 176
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A R+ E M + E + +LA+ IG ++GK
Sbjct: 177 Y--------GNPENCTSACKRILEVMQQ-----EANNTNKGEICLKILAHNNLIGRIIGK 223
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
G + R+ ++ KI + ++I+D I L + ++ V + ++S E
Sbjct: 224 SGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGSIDNMSRGE- 269
Query: 207 SPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPLT--GN-----------PSDNA 248
++ K+ S +D P FP L + ++ GN P +
Sbjct: 270 -----SQISAKLRQSYENDLQALAPQSIMFPGLHPMAMMSTAGNGMGFAGRSGMYPGSSY 324
Query: 249 SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
+ +A PG+ + + IIG +G+ +R++ SGA +
Sbjct: 325 PMYQPPTA------PGVPPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVK 378
Query: 309 FA-----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKG 363
A PL + ER VTI + A L+F + E +GF SG +
Sbjct: 379 IAPLEADKPLEQQTERKVTIVGTPEAQWK------AQYLIFEKMRE----EGFVSGTDDV 428
Query: 364 DAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
+ V ILV + VG + G G V E++ VTG+ IKL E + + I G
Sbjct: 429 R-LTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL--PEHTAATPVDEETTVHIIGP 485
Query: 424 YKNVQ 428
+ +VQ
Sbjct: 486 FFSVQ 490
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 24/171 (14%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCE 88
L P VG +IG GS I +I R F G+ ++ + ++++ E
Sbjct: 348 LYIPNNAVGAIIGTKGSHIRNIIR-----------FSGASVKIAPLEADKPLEQQ---TE 393
Query: 89 NDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY-CGLLANTTKIGVVVGKG 147
V + G + +A +FE+M E E V G DDV +L + ++G ++GKG
Sbjct: 394 RKVTIVGTP-EAQWKAQYLIFEKMRE-EGFVSGT---DDVRLTVEILVPSAQVGRIIGKG 448
Query: 148 GRNVTRMRIESGAKIVMLPPPACAAIDDQ-LIQITGATLAVKKALVAVTTC 197
G+NV ++ +G+ I + A +D++ + I G +V+ V+V C
Sbjct: 449 GQNVRELQRVTGSIIKLPEHTAATPVDEETTVHIIGPFFSVQ---VSVENC 496
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 46 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 105
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 106 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 151
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 152 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 205
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 206 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 249
>gi|320542558|ref|NP_001189200.1| pasilla, isoform L [Drosophila melanogaster]
gi|318068744|gb|ADV37291.1| pasilla, isoform L [Drosophila melanogaster]
Length = 758
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 254 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 313
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 314 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 359
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 360 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 413
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 414 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 460
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 128 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 173
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 174 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 227
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 228 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 271
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 186/446 (41%), Gaps = 78/446 (17%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
GY S R + P R++ PT VG +IG+ G+ I + + T+ ++
Sbjct: 188 GYGSPRPRQHDFP-----LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-------- 234
Query: 69 HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDD 127
HR +G+ ++ I + ST E + ++ + E +D
Sbjct: 235 HRK---ENAGAAEKPIT------------IHSTPEGCSAACRMILDIMQKEANETKTTED 279
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
+ +LA+ + +G ++GK GRN+ ++ ++G KI + +++ D I T+ V
Sbjct: 280 IP-LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITI------SSLQDLTIYNPERTITV 332
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLT 241
K ++ A C + +K + I + + P F L ++PP
Sbjct: 333 KGSIDAC--CKAEVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAA 390
Query: 242 GNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQ 300
G P + SS P + + +QEV LF A G +IGK+G ++ L
Sbjct: 391 GPP----TRIPPSS-------PEMSQSAPEQEVV--YLFIPTQAVGALIGKKGQHIKQLA 437
Query: 301 NASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
+ +GA I A A ER+V I+ + A +F + E + FS+
Sbjct: 438 HFAGASIKIAPAESPDVTERMVIITGTPEAQFK------AQGRIFGKLKE---ENFFSAK 488
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVI 418
E + I V + G + G G V+E++++T ++ +V +Q +ND V +
Sbjct: 489 EEV--KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ---TPDENDEVFV 542
Query: 419 QISGEY---KNVQNALSEVVGRLRHN 441
+ISG + + Q + E++ +++
Sbjct: 543 KISGHFFASQTAQRKIREIIQQVKQQ 568
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 174/424 (41%), Gaps = 78/424 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR + G+ ++ I
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDSL---GAAEKAITI 237
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N E +++ EV + E G G+ +LA+ IG ++G
Sbjct: 238 YGNP------------ENCTNACKKIMEVTQQEAYGLSKGE--ISLRILAHNNLIGRIIG 283
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTTCL 198
KGG + ++ ++ KI + ++I+D ++I + G+ + KA +++ L
Sbjct: 284 KGGTTIKKIMQDTDTKITV------SSINDINNFNLERIITVKGSIDNMSKAESMISSKL 337
Query: 199 QH-----LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
+ L M + F S + + P L P A +
Sbjct: 338 RQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGTGP--------APYPYQ 389
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA--- 310
+S + P G QE A + + IIG +G+ +R++ SGA + A
Sbjct: 390 TSLPTQQGIP----IGDTQETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIE 444
Query: 311 --APLTKSGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSSGENKGDAV 366
P+ + +R VTI SP A L+F + E +GF G + +
Sbjct: 445 QDKPVEQQNDRKVTIVG--------SPESQWKAQYLIFEKMRE----EGFVGG-TEDVRL 491
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKN 426
+ ILV + VG + G G V E++ VTG+ IKL +Q +A + +QI G + +
Sbjct: 492 TIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL-SEQQSTSPSADEEATVQIIGPFFS 550
Query: 427 VQNA 430
VQ+A
Sbjct: 551 VQSA 554
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+ G+ GR+ + LR+L IIG++G+ +R + + A + R
Sbjct: 175 YSGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKD 226
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
++ A E T + +N + +EV Q+ + G +KG+ +++ IL + +G +
Sbjct: 227 SLGAAEKAITIYGNPENCTN-ACKKIMEVTQQEAY--GLSKGE-ISLRILAHNNLIGRII 282
Query: 382 GSGSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G G + + + M+D TD K+ ++ ND+ +I + G N+ A S
Sbjct: 283 GKGGTTIKKIMQD---TDTKIT-------VSSINDINNFNLERIITVKGSIDNMSKAESM 332
Query: 434 VVGRLRHNLKSGEILNEARPRSPSGRVGGPALHKL 468
+ +LR + + N+ + +P + P LH +
Sbjct: 333 ISSKLRQSYE-----NDLQAMAPQSLM-FPGLHPM 361
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y + +P D + L P VG +IG GS I +I R F
Sbjct: 385 PYPYQTSLPTQQGIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR-----------F 433
Query: 65 PGSDHRVILVVGSGSIDRRIMFCEND-VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
G+ ++ + +++ +ND V G S +A +FE+M E E V G
Sbjct: 434 SGASVKIAPIEQDKPVEQ-----QNDRKVTIVGSPESQWKAQYLIFEKMRE-EGFV---G 484
Query: 124 DGDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQI 180
+DV +L +T++G ++GKGG+NV ++ +G+ I + + +A ++ +QI
Sbjct: 485 GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQI 544
Query: 181 TGATLAVKKA 190
G +V+ A
Sbjct: 545 IGPFFSVQSA 554
>gi|24645370|ref|NP_731356.1| pasilla, isoform C [Drosophila melanogaster]
gi|11526808|gb|AAG36790.1|AF220423_1 PASILLA splice variant 4 [Drosophila melanogaster]
gi|23170800|gb|AAF54378.2| pasilla, isoform C [Drosophila melanogaster]
Length = 561
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 57 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 116
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 117 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 162
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 163 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 216
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 217 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 263
>gi|442618214|ref|NP_001262415.1| pasilla, isoform R [Drosophila melanogaster]
gi|440217247|gb|AGB95797.1| pasilla, isoform R [Drosophila melanogaster]
Length = 780
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 276 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 335
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 336 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 381
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 382 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 435
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 436 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 482
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 176/424 (41%), Gaps = 78/424 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR + G+ ++ I
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDSL---GAAEKAITI 237
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N E +++ EV + E G G+ +LA+ IG ++G
Sbjct: 238 YGNP------------ENCTNACKKIMEVTQQEAYGLSKGE--ISLRILAHNNLIGRIIG 283
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTTCL 198
KGG + ++ ++ KI + ++I+D ++I + G+ + KA +++ L
Sbjct: 284 KGGTTIKKIMQDTDTKITV------SSINDINNFNLERIITVKGSIDNMSKAESMISSKL 337
Query: 199 QH-----LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
+ L M + F S + + S P L G S A +
Sbjct: 338 RQSYENDLQAMAPQSLMFPGLHPMAMMSTAG------MGYSSRGPGLYG--SGPAPYPYQ 389
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA--- 310
+S + P G QE A + + IIG +G+ +R++ SGA + A
Sbjct: 390 TSLPTQQGIP----IGDTQETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIE 444
Query: 311 --APLTKSGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVEGQQGFSSGENKGDAV 366
P+ + +R VTI SP A L+F + E +GF G + +
Sbjct: 445 QDKPVEQQNDRKVTIVG--------SPESQWKAQYLIFEKMRE----EGFVGG-TEDVRL 491
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKN 426
+ ILV + VG + G G V E++ VTG+ IKL +Q +A + +QI G + +
Sbjct: 492 TIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL-SEQQSTSPSADEEATVQIIGPFFS 550
Query: 427 VQNA 430
VQ+A
Sbjct: 551 VQSA 554
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y + +P D + L P VG +IG GS I +I R F
Sbjct: 385 PYPYQTSLPTQQGIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR-----------F 433
Query: 65 PGSDHRVILVVGSGSIDRRIMFCEND-VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
G+ ++ + +++ +ND V G S +A +FE+M E E V G
Sbjct: 434 SGASVKIAPIEQDKPVEQ-----QNDRKVTIVGSPESQWKAQYLIFEKMRE-EGFV---G 484
Query: 124 DGDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQI 180
+DV +L +T++G ++GKGG+NV ++ +G+ I + + +A ++ +QI
Sbjct: 485 GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQI 544
Query: 181 TGATLAVKKA 190
G +V+ A
Sbjct: 545 IGPFFSVQSA 554
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+ G+ GR+ + LR+L IIG++G+ +R + + A + R
Sbjct: 175 YSGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKD 226
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
++ A E T + +N + +EV Q+ + G +KG+ +++ IL + +G +
Sbjct: 227 SLGAAEKAITIYGNPENCTN-ACKKIMEVTQQEAY--GLSKGE-ISLRILAHNNLIGRII 282
Query: 382 GSGSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G G + + + M+D TD K+ ++ ND+ +I + G N+ A S
Sbjct: 283 GKGGTTIKKIMQD---TDTKIT-------VSSINDINNFNLERIITVKGSIDNMSKAESM 332
Query: 434 VVGRLRHNLKS 444
+ +LR + ++
Sbjct: 333 ISSKLRQSYEN 343
>gi|442618212|ref|NP_001262414.1| pasilla, isoform Q [Drosophila melanogaster]
gi|440217246|gb|AGB95796.1| pasilla, isoform Q [Drosophila melanogaster]
Length = 517
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 13 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 72
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 73 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 118
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 119 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 172
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 173 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 219
>gi|161078120|ref|NP_001036697.1| pasilla, isoform J [Drosophila melanogaster]
gi|19527741|gb|AAL89985.1| AT03366p [Drosophila melanogaster]
gi|113194765|gb|ABI31154.1| pasilla, isoform J [Drosophila melanogaster]
Length = 539
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 35 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 94
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 95 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 140
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 141 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 194
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 195 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 241
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 29/184 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +TK RI G PG R +++ D
Sbjct: 233 FRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPD----- 287
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD-------DVAYCGLLANTTK 139
+S + ++RV +R+ + DG+ ++ LL +++
Sbjct: 288 ---------APLSPAMDGLLRVHKRITD-----SSDGESSQPQRSAGNIGPTRLLVPSSQ 333
Query: 140 IGVVVGKGGRNVTRMRIESGA--KIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G + ++ S + +IV PP A DD++++I G L V++A+ +++
Sbjct: 334 AGSLIGKQGATIKSIQDSSKSIVRIVENVPP-VALNDDRVVEIQGEPLGVQEAVELISSH 392
Query: 198 LQHL 201
L+
Sbjct: 393 LRKF 396
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E R+L IIG++G ++ + + A I ER V ISA +
Sbjct: 226 GWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDE 285
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D SP + + V R + + + G+ +LV + G L G + +
Sbjct: 286 PDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATI 345
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
++D + + +++V E V A +D V++I GE VQ A+ + LR L +L
Sbjct: 346 KSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDRSVL 403
>gi|24645368|ref|NP_731355.1| pasilla, isoform D [Drosophila melanogaster]
gi|23170799|gb|AAN13428.1| pasilla, isoform D [Drosophila melanogaster]
Length = 583
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 79 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 138
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 139 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 184
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 185 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 238
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 239 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 285
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 107/237 (45%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ +VE++ + D +L + G++
Sbjct: 128 VLEFIMDKIREKPDLTN----------KIVDVESKQTQERD----KQVKILVPNSTAGMI 173
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 174 IGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 227
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 228 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 271
>gi|161078118|ref|NP_001036691.1| pasilla, isoform I [Drosophila melanogaster]
gi|113194762|gb|ABI31151.1| pasilla, isoform I [Drosophila melanogaster]
Length = 519
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 79 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 138
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 139 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 184
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 185 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 238
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 239 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 282
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 176/439 (40%), Gaps = 108/439 (24%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR + G+ ++ I
Sbjct: 139 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDSL---GAAEKAITI 187
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N E +++ EV + E G G+ +LA+ IG ++G
Sbjct: 188 YGNP------------ENCTNACKKIMEVTQQEAYGLSKGE--ISLRILAHNNLIGRIIG 233
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTTCL 198
KGG + ++ ++ KI + ++I+D ++I + G+ + KA +++ L
Sbjct: 234 KGGTTIKKIMQDTDTKITV------SSINDINNFNLERIITVKGSIDNMSKAESMISSKL 287
Query: 199 QH-----LSTMEKSPICFN--RPIEKV-------------FYSNSSDPHREFFPHLSLVP 238
+ L M + F P+ + Y + P +P+ + +P
Sbjct: 288 RQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAP----YPYQTSLP 343
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
G P G QE A + + IIG +G+ +R+
Sbjct: 344 TQQGIPI-----------------------GDTQETAF-LYIPNTSVGAIIGSKGSHIRN 379
Query: 299 LQNASGALISFA-----APLTKSGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVE 351
+ SGA + A P+ + +R VTI SP A L+F + E
Sbjct: 380 IIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG--------SPESQWKAQYLIFEKMRE-- 429
Query: 352 GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA 411
+GF G + + + ILV + VG + G G V E++ VTG+ IKL +Q +
Sbjct: 430 --EGFVGG-TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL-SEQQSTSPS 485
Query: 412 AQNDVVIQISGEYKNVQNA 430
A + +QI G + +VQ+A
Sbjct: 486 ADEEATVQIIGPFFSVQSA 504
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y + +P D + L P VG +IG GS I +I R F
Sbjct: 335 PYPYQTSLPTQQGIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR-----------F 383
Query: 65 PGSDHRVILVVGSGSIDRRIMFCEND-VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
G+ ++ + +++ +ND V G S +A +FE+M E E V G
Sbjct: 384 SGASVKIAPIEQDKPVEQ-----QNDRKVTIVGSPESQWKAQYLIFEKMRE-EGFV---G 434
Query: 124 DGDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQI 180
+DV +L +T++G ++GKGG+NV ++ +G+ I + + +A ++ +QI
Sbjct: 435 GTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQI 494
Query: 181 TGATLAVKKA 190
G +V+ A
Sbjct: 495 IGPFFSVQSA 504
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+ G+ GR+ + LR+L IIG++G+ +R + + A + R
Sbjct: 125 YSGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKD 176
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
++ A E T + +N + +EV Q+ + G +KG+ +++ IL + +G +
Sbjct: 177 SLGAAEKAITIYGNPENCTN-ACKKIMEVTQQEAY--GLSKGE-ISLRILAHNNLIGRII 232
Query: 382 GSGSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G G + + + M+D TD K+ ++ ND+ +I + G N+ A S
Sbjct: 233 GKGGTTIKKIMQD---TDTKIT-------VSSINDINNFNLERIITVKGSIDNMSKAESM 282
Query: 434 VVGRLRHNLKS 444
+ +LR + ++
Sbjct: 283 ISSKLRQSYEN 293
>gi|24645366|ref|NP_731354.1| pasilla, isoform B [Drosophila melanogaster]
gi|11526802|gb|AAG36787.1|AF220420_1 PASILLA splice variant 1 [Drosophila melanogaster]
gi|11526804|gb|AAG36788.1|AF220421_1 PASILLA splice variant 2 [Drosophila melanogaster]
gi|23170798|gb|AAN13427.1| pasilla, isoform B [Drosophila melanogaster]
Length = 475
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 35 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 94
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 95 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 140
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 141 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 194
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 195 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 238
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 107/249 (42%), Gaps = 31/249 (12%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FRLV P VG +IGR G +I + +TK ++ G G+ R++L
Sbjct: 47 KRWP-GWPGDSV-FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVL 104
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA---- 129
V SG D + E+ +A++RVF+R V +G +G A
Sbjct: 105 V--SGKEDPAL------------ELPPAMDALMRVFKR---VSGITDGAAEGTQAATAPG 147
Query: 130 YCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITG 182
C LL + ++GK G ++ ++ +GA I ++ P D+++++I G
Sbjct: 148 VCAARLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQG 207
Query: 183 ATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG 242
T V KAL AV+ L+ F + V S+D + H S+V
Sbjct: 208 ETEKVLKALQAVSNHLRKFLVDHSVLPLFEKTNATVTQDRSTDAWTD-ISHPSIVSAQIN 266
Query: 243 NPSDNASEF 251
P E+
Sbjct: 267 QPPPVVDEY 275
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +++ L + A + + ER+V +S E P
Sbjct: 58 FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPP 117
Query: 336 VQNAAVLVFARSVEVE--GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+A + VF R + +G + G A ++ GA + + G+S + +++
Sbjct: 118 AMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGAS-IKAIQE 176
Query: 394 VTGTDIKLVGGEQVLG--CAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
TG I+++ ++ +++ +++I GE + V AL V LR L +L
Sbjct: 177 GTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVL 233
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 121/289 (41%), Gaps = 51/289 (17%)
Query: 53 DTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERM 112
+T+ RI G G+ R++L+ G + +S +AVIRVF+R+
Sbjct: 4 ETRARIRVLDGAVGTSDRIVLISGREEPE--------------APLSPAMDAVIRVFKRV 49
Query: 113 WEVEAEVEGDGDG---DDVAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP- 166
+ +E EGDG VA+C LL +T+ ++GK G + ++ +GA + +L
Sbjct: 50 TGL-SESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSG 108
Query: 167 --PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSS 224
P AA D++++++ G L V+KAL AV L+ F R S
Sbjct: 109 DEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATI---SQ 165
Query: 225 DPHREFFPHLSLV--PPLTGNPSDNASEFHSSSADADR----DHPGLDKKGRKQ------ 272
D + + SL+ TG SD + S DR +H GL G++
Sbjct: 166 DRQSDTWADKSLLHGTSQTGMGSDYSLPAKRESLYLDRETQMEHSGLPMYGQEHGLSGIR 225
Query: 273 -------------EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
++A M A IIG GA + ++ SGA+++
Sbjct: 226 SSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILT 274
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 316 SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV--------A 367
+ +R+V IS E + SP +A + VF R G S E G A +
Sbjct: 18 TSDRIVLISGREEPEAPLSPAMDAVIRVFKRVT------GLSESEGDGKAYGAAGVAFCS 71
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
+ +LV + L G S + +++ TG ++++ G++V AA ++ ++++ GE V
Sbjct: 72 IRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKV 131
Query: 428 QNALSEVVGRLRHNLKSGEIL 448
Q AL VVG LR L +L
Sbjct: 132 QKALEAVVGHLRKFLVDHSVL 152
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 168/424 (39%), Gaps = 81/424 (19%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I +I + ++ R+ HR V GS+++ I
Sbjct: 87 LRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV--------HRKENV---GSLEKSITI 135
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
G + A R+ E M + EA G+ +LA+ IG ++GK
Sbjct: 136 Y--------GNPENCTNACKRILEVMQQ-EALSTNKGE----ICLKILAHNNLIGRIIGK 182
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
G + R+ ++ KI + ++I+D I L + ++ V ++++S E
Sbjct: 183 SGNTIKRIMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE- 228
Query: 207 SPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASEF 251
N+ K+ S +D P FP L + + T P + F
Sbjct: 229 -----NQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSF 283
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA- 310
S A P QE + IIG +G+ +RS+ S A + A
Sbjct: 284 AMSKTPASVVPPVFPND--LQETTY-LYIPNNAVGAIIGTKGSHIRSIMRFSNASLKIAP 340
Query: 311 ----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
PL + ER VTI + A ++F + E +GF G + +
Sbjct: 341 LDADKPLDQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDD-VRL 389
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND--VVIQISGEY 424
V +LV + VG + G G V E++ VTG+ IKL E L A D + I G +
Sbjct: 390 TVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPAGGDEETPVHIIGPF 447
Query: 425 KNVQ 428
+VQ
Sbjct: 448 YSVQ 451
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 30/199 (15%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S + +PG+ GR+ + LR+L IIG++G+ +R++ S A +
Sbjct: 65 SQRNQRNTYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV---- 120
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
R + +LE T + +N R +EV Q+ S+ NKG+ + + IL
Sbjct: 121 ----HRKENVGSLEKSITIYGNPENCTN-ACKRILEVMQQEALST--NKGE-ICLKILAH 172
Query: 374 ADFVGCLTG-SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYK 425
+ +G + G SG++ M+D TD K+ ++ ND+ +I + G +
Sbjct: 173 NNLIGRIIGKSGNTIKRIMQD---TDTKIT-------VSSINDINSFNLERIITVKGLIE 222
Query: 426 NVQNALSEVVGRLRHNLKS 444
N+ A +++ +LR + ++
Sbjct: 223 NMSRAENQISTKLRQSYEN 241
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 17 PLNLPDDVV-SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
P P+D+ + L P VG +IG GS I SI R F + ++ +
Sbjct: 294 PPVFPNDLQETTYLYIPNNAVGAIIGTKGSHIRSIMR-----------FSNASLKIAPLD 342
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-DDVAY-CGL 133
+D++ E V + G +A +FE+M E EG G DDV L
Sbjct: 343 ADKPLDQQ---TERKVTIVGTP-EGQWKAQYMIFEKMRE-----EGFMCGTDDVRLTVEL 393
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVM----LPPPA 169
L ++++G ++GKGG+NV ++ +G+ I + L PPA
Sbjct: 394 LVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPA 433
>gi|25012554|gb|AAN71378.1| RE36563p, partial [Drosophila melanogaster]
Length = 605
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 101 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 160
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 161 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 206
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 207 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 260
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 261 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 307
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 176/439 (40%), Gaps = 108/439 (24%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR + G+ ++ I
Sbjct: 189 LRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKDSL---GAAEKAITI 237
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N E +++ EV + E G G+ +LA+ IG ++G
Sbjct: 238 YGNP------------ENCTNACKKIMEVTQQEAYGLSKGE--ISLRILAHNNLIGRIIG 283
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTTCL 198
KGG + ++ ++ KI + ++I+D ++I + G+ + KA ++ L
Sbjct: 284 KGGTTIKKIMQDTDTKITV------SSINDINNFNLERIITVKGSIDNMSKAESMISNKL 337
Query: 199 QH-----LSTMEKSPICFN--RPIEKV-------------FYSNSSDPHREFFPHLSLVP 238
+ L M + F P+ + Y + P +P+ + +P
Sbjct: 338 RQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAP----YPYQASLP 393
Query: 239 PLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRS 298
G P G QE A + + IIG +G+ +R+
Sbjct: 394 TQQGIPI-----------------------GDTQETAF-LYIPNTSVGAIIGSKGSHIRN 429
Query: 299 LQNASGALISFA-----APLTKSGERVVTISALEYLDTRHSPVQN--AAVLVFARSVEVE 351
+ SGA + A P+ + +R VTI SP A L+F + E
Sbjct: 430 IIRFSGASVKIAPIEQDKPVDQQNDRKVTIVG--------SPESQWKAQYLIFEKMRE-- 479
Query: 352 GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA 411
+GF +G + + + ILV + VG + G G V E++ VTG+ IKL +Q +
Sbjct: 480 --EGFVAG-TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL-SEQQSTSPS 535
Query: 412 AQNDVVIQISGEYKNVQNA 430
A + +QI G + +VQ+A
Sbjct: 536 ADEEATVQIIGPFFSVQSA 554
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 7 PYGYSSKRRGPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
PY Y + +P D + L P VG +IG GS I +I R F
Sbjct: 385 PYPYQASLPTQQGIPIGDTQETAFLYIPNTSVGAIIGSKGSHIRNIIR-----------F 433
Query: 65 PGSDHRVILVVGSGSIDRRIMFCEND-VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
G+ ++ + +D+ +ND V G S +A +FE+M E E V G
Sbjct: 434 SGASVKIAPIEQDKPVDQ-----QNDRKVTIVGSPESQWKAQYLIFEKMRE-EGFVAGT- 486
Query: 124 DGDDVAYC-GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC--AAIDDQLIQI 180
+DV +L +T++G ++GKGG+NV ++ +G+ I + + +A ++ +QI
Sbjct: 487 --EDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSADEEATVQI 544
Query: 181 TGATLAVKKA 190
G +V+ A
Sbjct: 545 IGPFFSVQSA 554
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
+ G+ GR+ + LR+L IIG++G+ +R + + A + R
Sbjct: 175 YSGVSGSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDV--------HRKD 226
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
++ A E T + +N + +EV Q+ + G +KG+ +++ IL + +G +
Sbjct: 227 SLGAAEKAITIYGNPENCTNAC-KKIMEVTQQEAY--GLSKGE-ISLRILAHNNLIGRII 282
Query: 382 GSGSSAVSE-MEDVTGTDIKLVGGEQVLGCAAQNDV-------VIQISGEYKNVQNALSE 433
G G + + + M+D TD K+ ++ ND+ +I + G N+ A S
Sbjct: 283 GKGGTTIKKIMQD---TDTKIT-------VSSINDINNFNLERIITVKGSIDNMSKAESM 332
Query: 434 VVGRLRHNLKS 444
+ +LR + ++
Sbjct: 333 ISNKLRQSYEN 343
>gi|366993026|ref|XP_003676278.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
gi|342302144|emb|CCC69917.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
Length = 445
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
P+D V R++C ++G G IS I++DT RI+ G R+I V G+
Sbjct: 70 FPEDNVHLRMLCSVKEASLVVGPKGESISKIKKDTSTRINVSENIRGVPERIIYVRGA-- 127
Query: 80 IDRRIMFCEN--DVVVEGGEVSSTQEAVIRVFERMWEVEAEVE---GDGDGDDVAYCGLL 134
C+N + + + E +I F+ E E + E D++ LL
Sbjct: 128 -------CDNVANAYLNIAKAIRKNEGII--FQGPEEDEKDREEGSQSKSSDELVTIHLL 178
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
+ IG ++GK G + + S K+ P ++ +D+++ ITG A++KA +
Sbjct: 179 ISHHLIGYIIGKHGSRLKEIEQTSSCKLYASPDQLFSS-NDRILTITGFPDAIQKATRCI 237
Query: 195 -TTCLQ-HLSTMEKSPICFNRPIEKVFYSNSSDPH 227
T L H ST +K I + I SNSS +
Sbjct: 238 GQTILDCHESTSKKRAIFYQPSIGYSALSNSSSYY 272
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 90/221 (40%), Gaps = 55/221 (24%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
+R+ P P D V FRL+ P VG +IGR G + + +T+ RI G PG+ R++
Sbjct: 39 ERKWP-GWPGDNV-FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIV 96
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC- 131
LV + +S + ++RV R+ E GDG+ V +
Sbjct: 97 LVSAKEDPE--------------ATISPAMDGLLRVHRRVTE-----GSSGDGEPVEHII 137
Query: 132 --------GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGA 183
LL T+ G ++G+ P CA DD+++++ G
Sbjct: 138 LPSGLVQSRLLVTATQAGSLIGRQEEL-----------------PLCALADDRMVEVQGE 180
Query: 184 TLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSS 224
L V+KA+ V + L+ +R + ++F N S
Sbjct: 181 ILKVQKAMELVVSHLRKF--------LVDRSVLQLFEFNVS 213
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 253 SSSADADRDHPGLDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
S+ A + + P ++K G + R++ IIG++G V+ + + + I
Sbjct: 26 STVAGSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKIL 85
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
+ + ER+V +SA E + SP + + V R E G G GE + S
Sbjct: 86 DGVPGTLERIVLVSAKEDPEATISPAMDGLLRVHRRVTE--GSSG--DGEPVEHIILPSG 141
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG-CAAQNDVVIQISGEYKNVQN 429
LV + + T +GS L+G ++ L CA +D ++++ GE VQ
Sbjct: 142 LVQSRLLVTATQAGS---------------LIGRQEELPLCALADDRMVEVQGEILKVQK 186
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+ VV LR L +L
Sbjct: 187 AMELVVSHLRKFLVDRSVLQ 206
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FR++ P VG +IGR G I + +K RI G PG R ++
Sbjct: 105 KRWP-GWPGDSV-FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVI 162
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-------GD 126
+ D I S + ++R+ +R+ + DG+
Sbjct: 163 ISAKDEPDEPI--------------SPAMDGLLRIHKRITDG-----SDGEFGQPQRGAS 203
Query: 127 DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGA--KIVMLPPPACAAIDDQLIQITGAT 184
+V LL ++ G ++GK G + ++ S + +IV PP A DD++++I G
Sbjct: 204 NVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSVVRIVENVPP-VALNDDRVVEIQGEP 262
Query: 185 LAVKKALVAVTTCLQHL 201
L V KA+ + L+
Sbjct: 263 LGVHKAVELIANHLRKF 279
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 8/189 (4%)
Query: 264 GLDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
G DK+ G + R+L IIG++G ++ + S A I ER V
Sbjct: 102 GEDKRWPGWPGDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAV 161
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKG--DAVAVSILVGADFVGC 379
ISA + D SP + + + R +G G +G + +LV A G
Sbjct: 162 IISAKDEPDEPISPAMDGLLRIHKRI--TDGSDGEFGQPQRGASNVGPTRLLVPASQAGS 219
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
L G + + ++D + + +++V E V A +D V++I GE V A+ + LR
Sbjct: 220 LIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLR 277
Query: 440 HNLKSGEIL 448
L +L
Sbjct: 278 KFLVDHSVL 286
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 86/211 (40%), Gaps = 17/211 (8%)
Query: 252 HSSSADADRDHPGLDK-KGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
H SAD G ++ G RML S IIG++G VR L + A +
Sbjct: 39 HLDSADDTNCSAGENRYPGWPGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVI 98
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
+ ERVV I A E D P +A + V+ V +G G AV I
Sbjct: 99 GGHFAAAERVVLIFAKEQPDEPIPPAMDALLRVYQNIVNDDGL-----GMGSDSAVVTRI 153
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGC-----AAQNDVVIQISGEYK 425
L+ ++ L G S ++ +E+ + TDI+ VL C A D +++I G+
Sbjct: 154 LIPSEQALNLIGEQGSMINLIEEASQTDIR------VLDCNLPPAALDEDRIVEIWGQPT 207
Query: 426 NVQNALSEVVGRLRHNLKSGEILNEARPRSP 456
V+ AL V LR L ++ P P
Sbjct: 208 RVRKALELVARHLRKYLVDRSVIPLFDPHVP 238
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ + VG +IG+ G + + +TK + GG + RV+L+ D I
Sbjct: 64 FRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEPI-- 121
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG---DDVAYCGLLANTTKIGVV 143
+A++RV++ + V DG G D +L + + +
Sbjct: 122 ------------PPAMDALLRVYQNI------VNDDGLGMGSDSAVVTRILIPSEQALNL 163
Query: 144 VGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+G+ G + + S I +L PPA A +D++++I G V+KAL V L+
Sbjct: 164 IGEQGSMINLIEEASQTDIRVLDCNLPPA-ALDEDRIVEIWGQPTRVRKALELVARHLR 221
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
LL ++IG ++GKGG N+ +MR ESGA+I +P P CA D+L+ I+G AVK
Sbjct: 53 LLVANSQIGSLIGKGGNNIQKMRTESGAQI-QIPRKDELPGCAFSFDELVVISGDATAVK 111
Query: 189 KALVAVTTCLQHLSTMEKSP 208
KAL AV+ L E+ P
Sbjct: 112 KALYAVSAFLYKHLPKEQIP 131
Score = 38.5 bits (88), Expect = 9.1, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
+LV +G L G G + + +M +G I++ +++ GCA D ++ ISG+ V+
Sbjct: 53 LLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKK 112
Query: 430 ALSEVVGRLRHNLKSGEI 447
AL V L +L +I
Sbjct: 113 ALYAVSAFLYKHLPKEQI 130
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 47/198 (23%)
Query: 13 KRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
+R+ P P D V FRL+ P VG +IGR G + + +T+ RI G PG+ R++
Sbjct: 39 ERKWP-GWPGDNV-FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIV 96
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC- 131
LV + +S + ++RV R+ E GDG+ V +
Sbjct: 97 LVSAKEDPE--------------ATISPAMDGLLRVHRRVTE-----GSSGDGEPVEHII 137
Query: 132 --------GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGA 183
LL T+ G ++G+ P CA DD+++++ G
Sbjct: 138 LPSGLVQSRLLVTATQAGSLIGRQEEL-----------------PLCALADDRMVEVQGE 180
Query: 184 TLAVKKALVAVTTCLQHL 201
L V+KA+ V + L+
Sbjct: 181 ILKVQKAMELVVSHLRKF 198
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 253 SSSADADRDHPGLDKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
S+ A + + P ++K G + R++ IIG++G V+ + + + I
Sbjct: 26 STVAGSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKIL 85
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
+ + ER+V +SA E + SP + + V R E G G GE + S
Sbjct: 86 DGVPGTLERIVLVSAKEDPEATISPAMDGLLRVHRRVTE--GSSG--DGEPVEHIILPSG 141
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG-CAAQNDVVIQISGEYKNVQN 429
LV + + T +GS L+G ++ L CA +D ++++ GE VQ
Sbjct: 142 LVQSRLLVTATQAGS---------------LIGRQEELPLCALADDRMVEVQGEILKVQK 186
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+ VV LR L +L
Sbjct: 187 AMELVVSHLRKFLVDRSVLQ 206
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 114/290 (39%), Gaps = 61/290 (21%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V FR+V P+ +G +IG+ G I IR DTK I + RVI++ +
Sbjct: 51 VIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKEN----- 105
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI---- 140
EN + E ++ + VE G V + ANT ++
Sbjct: 106 ---ENGATDAENALQRIAELILNEDDGGSSAGGGVE---IGKLVNAGHVAANTIRLLIAG 159
Query: 141 ---GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATLAVKKALV 192
G ++G G+N+ ++R SGA I +L P P CA+ D+++QI+G V KAL
Sbjct: 160 SQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALE 219
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVF-----YSNSSDPHREFFPHLS--------LVPP 239
+ L+ P ++V Y+ S+ P +++ P + +VP
Sbjct: 220 EIGCQLRE------------NPPKQVISISPSYNYSAVPFQQYAPQAAADYVTMEMMVPE 267
Query: 240 -----LTGNPSDNASEFHSSSADADRDHPG--------LDKKGRKQEVAL 276
L G N S S + H G + G Q+VAL
Sbjct: 268 TMMGGLIGRSGSNISRIRVESGAVIKVHGGKGAQKHRHIQLAGSSQQVAL 317
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 12/221 (5%)
Query: 233 HLSLVPPLTGNPSDNASEFHSSSADADRD--HPGLDKKGRKQEVALRMLFSGWTASGIIG 290
L+ PP T P NA + D D K+ + +V R++ +IG
Sbjct: 8 QLNPSPPGTELPKLNALPVTAKRRRDDFDGGETSAAKRQARADVIFRIVVPSGKIGKVIG 67
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSGERVVTISALE----YLDTRHSPVQNAAVLVFAR 346
K+G ++ ++ + A I A + + ERV+ IS+ E D ++ + A +++
Sbjct: 68 KQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENENGATDAENALQRIAELILNED 127
Query: 347 SVEVEGQQGFSSGE--NKGDAVA--VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
G G+ N G A + +L+ G L G + ++ + +G I ++
Sbjct: 128 DGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQAGSLIGMSGQNIVKLRNSSGAMITVL 187
Query: 403 GGEQVLGCAA--QNDVVIQISGEYKNVQNALSEVVGRLRHN 441
Q+ CA+ ++D V+QISG+ V AL E+ +LR N
Sbjct: 188 APNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQLREN 228
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG---- 78
D V+ ++ P ++GGLIGRSGS IS IR ++ I GG HR I + GS
Sbjct: 257 DYVTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKVHGGKGAQKHRHIQLAGSSQQVA 316
Query: 79 -SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERM 112
+ R + + +V + G + + ++F R+
Sbjct: 317 LAKQRVDEYIYSQLVQQAGTQQYDEAGMAKIFVRL 351
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---------------LTKSGERV 320
+R+L +G A +IG G + L+N+SGA+I+ AP + SG+
Sbjct: 153 IRLLIAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVP 212
Query: 321 VTISALEYL--DTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVG 378
V + ALE + R +P + + + + Q ++ + D V + ++V +G
Sbjct: 213 VVLKALEEIGCQLRENPPKQVISISPSYNYSAVPFQQYAP-QAAADYVTMEMMVPETMMG 271
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
L G S +S + +G IK+ GG+ AQ IQ++G + V A V
Sbjct: 272 GLIGRSGSNISRIRVESGAVIKVHGGK-----GAQKHRHIQLAGSSQQVALAKQRV 322
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 103/232 (44%), Gaps = 25/232 (10%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FR+V P VG +IGR G +I + +TK R+ G G+ R++L
Sbjct: 42 KRWP-GWPGDNV-FRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVL 99
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDDVAYCG 132
V S D G E+ +A+IRVF+R+ + + EG C
Sbjct: 100 V--SAKED------------PGLELPPAMDALIRVFKRVNGISDGAAEGTQTSAAPGVCA 145
Query: 133 --LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITGATL 185
L+ + ++GK G ++ ++ +GA I ++ P D+++++I G T
Sbjct: 146 ARLVVPGAQAINLIGKQGASIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGETE 205
Query: 186 AVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV 237
V KAL AV+ L+ F + V S++ + PH S+V
Sbjct: 206 KVLKALQAVSNHLRKFLVDHSVLPLFEKTNAPVSQDRSAETWND-MPHHSIV 256
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 5/177 (2%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
RM+ IIG++G +++ L + A + + ER+V +SA E P
Sbjct: 53 FRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELPP 112
Query: 336 VQNAAVLVFAR--SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+A + VF R + +G + G A ++ GA + + G+S + +++
Sbjct: 113 AMDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGAS-IKAIQE 171
Query: 394 VTGTDIKLVGGEQ--VLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
TG I+++ ++ ++ +++I GE + V AL V LR L +L
Sbjct: 172 GTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVDHSVL 228
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
+LV +GCL G G + V+EM +T +I+++ E + A+++D ++QISG+ ++
Sbjct: 10 LLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLDVAKD 69
Query: 430 ALSEVVGRLRHNL 442
AL +VV RLR NL
Sbjct: 70 ALMQVVTRLRANL 82
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKK 189
LL T++IG ++GKGG VT MR + A I +L P A+ DD+++QI+G K
Sbjct: 10 LLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLDVAKD 69
Query: 190 ALVAVTTCLQ 199
AL+ V T L+
Sbjct: 70 ALMQVVTRLR 79
>gi|51092069|gb|AAT94448.1| RE39088p [Drosophila melanogaster]
Length = 563
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 123 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 182
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 183 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 228
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 229 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 282
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 283 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 326
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 164/417 (39%), Gaps = 79/417 (18%)
Query: 35 VVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+VG +IGR G+ I +I + ++ R+ HR V GS+++ I
Sbjct: 86 MVGAIIGRQGTTIRTITQQSRARVDV--------HRKENV---GSLEKSITIY------- 127
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVGKGGRNVTR 153
G + A R+ E M + EA G+ C +LA+ IG ++GK G + R
Sbjct: 128 -GNPENCTNACKRILEVMQQ-EALSTNKGE-----ICLKILAHNNLIGRIIGKSGNTIKR 180
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNR 213
+ ++ KI + ++I+D I L + ++ V ++++S E N+
Sbjct: 181 IMQDTDTKITV------SSIND----INSFNL---ERIITVKGLIENMSRAE------NQ 221
Query: 214 PIEKVFYSNSSD-----PHREFFPHLSLVPPL----------TGNPSDNASEFHSSSADA 258
K+ S +D P FP L + + T P + F S A
Sbjct: 222 ISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPA 281
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-----APL 313
P QE + IIG +G+ +RS+ S A + A PL
Sbjct: 282 SVVPPAFPND--MQETTF-LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPL 338
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVG 373
+ ER VTI + A ++F + E +GF G + + V +LV
Sbjct: 339 DQQTERKVTIVGTPEGQWK------AQYMIFEKMRE----EGFMCGTDDVR-LTVELLVA 387
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+ VG + G G V E++ VTG+ IKL + + I G + +VQ+A
Sbjct: 388 SSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSA 444
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 26/159 (16%)
Query: 17 PLNLPDDV--VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV 74
P P+D+ +F L P VG +IG GS I SI R F + ++ +
Sbjct: 285 PPAFPNDMQETTF-LYIPNNAVGAIIGTKGSHIRSIMR-----------FSSASLKIAPL 332
Query: 75 VGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-DDVAYC-G 132
+D++ E V + G +A +FE+M E EG G DDV
Sbjct: 333 DADKPLDQQ---TERKVTIVGTP-EGQWKAQYMIFEKMRE-----EGFMCGTDDVRLTVE 383
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACA 171
LL ++++G ++GKGG+NV ++ +G+ ++ LP A A
Sbjct: 384 LLVASSQVGRIIGKGGQNVRELQRVTGS-VIKLPEHALA 421
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/438 (21%), Positives = 179/438 (40%), Gaps = 70/438 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I ++ + T+ ++ HR +G+ ++ I
Sbjct: 199 LRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDI--------HRK---ENAGAAEKPIT- 246
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+ ST E + E+ + + + ++A+ IG ++GK
Sbjct: 247 -----------IHSTPEGCSAACRMIMEIMQKEANETKAMEDIPLKIIASNNYIGRLIGK 295
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK +L A C + M+K
Sbjct: 296 QGRNLKKIEEETGTKITI------SSLQDLNIYNNERTITVKGSLEAC--CNAEVEIMKK 347
Query: 207 SPICFNRPIEKVFYSNSSDPHREF---------FPHL-------SLVPPLTGNPSDNASE 250
+ I + S P P L S +PP+ G N
Sbjct: 348 LREAYENDIAAINQQTSLIPGLNLNALGIFSSTLPVLSPAAGPRSTMPPV-GPAGYNPFL 406
Query: 251 FHSSSADADRDHP---GLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGAL 306
HSS + P + + QE + LF A G +IGK+G ++ L + +GA
Sbjct: 407 GHSSHLSSLYGVPPASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGAS 466
Query: 307 ISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
I A A + + ER+V I+ + A +F + E + F+ E
Sbjct: 467 IKVAPAEMPDATERMVIITGTPEAQFK------AQGRIFGKLKE---ENIFTGKEEV--R 515
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY- 424
+ I V + G + G G V+E++ +T ++ +V +Q +N+VV++I G +
Sbjct: 516 LETHIKVPSTAAGRVIGKGGKTVNELQSLTSAEV-IVPRDQT--PDEKNEVVVKICGHFF 572
Query: 425 --KNVQNALSEVVGRLRH 440
+ Q + E++ +++
Sbjct: 573 ANQTAQRKIREIIQQVKQ 590
>gi|390335393|ref|XP_003724136.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 696
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 47/214 (21%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC--EGGFPGSDHRVILVVGSGSIDR 82
++ L+ P VVG +IGR G ISS++ ++ C I E G G DR
Sbjct: 124 INDELLVPDKVVGLIIGRQGQQISSLQSESGCNIQIAPENGISG--------------DR 169
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-----EAEVEGDGDGDDVAYCGLLANT 137
++ + T EAV+ + ++ + E EG+ D +L
Sbjct: 170 QVTL------------TGTPEAVMHAKSLILDIVNKASQNEAEGNMTVD------MLIPA 211
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
TK+G+V+GKGG + +++ ++G ++VM+ A D+ ++I+G + +++A V+
Sbjct: 212 TKVGLVIGKGGETIKQLQEQAGVRMVMIQEGPVATGMDKPLRISGDSQKIEEAKRLVSEV 271
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFF 231
+++ ++S FYS PH++
Sbjct: 272 MENAKNNDRSS-------GDNFYSRGG-PHKDVI 297
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IIG++G + SLQ+ SG I A SG+R VT++ ++ A+S
Sbjct: 138 IIGRQGQQISSLQSESGCNIQIAPENGISGDRQVTLTGT------------PEAVMHAKS 185
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
+ ++ S E +G+ + V +L+ A VG + G G + ++++ G + ++ Q
Sbjct: 186 LILDIVNKASQNEAEGN-MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMI---QE 241
Query: 408 LGCAAQNDVVIQISGEYKNVQNA---LSEVVGRLRHNLKS 444
A D ++ISG+ + ++ A +SEV+ ++N +S
Sbjct: 242 GPVATGMDKPLRISGDSQKIEEAKRLVSEVMENAKNNDRS 281
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 63 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
++ D + E ++++ ++ + E++ + D +L +
Sbjct: 123 EGIMTVLDFIMDKIREKPDLTT----------KIIDAESKQTQERD----KQVKILVPNS 168
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GKGG + +++ ESG+ + + P ++ ++ I I G K A C
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CK 222
Query: 199 QHLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSS 254
LS + + P C N V Y++ S P F P TG+P + N + +SS
Sbjct: 223 MILSKIVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSS 269
Query: 255 SA 256
+A
Sbjct: 270 TA 271
>gi|194741910|ref|XP_001953430.1| GF17214 [Drosophila ananassae]
gi|190626489|gb|EDV42013.1| GF17214 [Drosophila ananassae]
Length = 532
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS---TEA 124
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
IMF D +++ ++ + ++ ++AE + + D L+ N+T G++
Sbjct: 125 IMFVL-DFIMD--KIREKPDLTTKI------IDAESKQTQERDKQVKI-LVPNSTA-GMI 173
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 174 IGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 227
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 228 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 271
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 128/341 (37%), Gaps = 60/341 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VGG+IGR G I I +T+ R+ G PG+ R +++
Sbjct: 49 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEE------- 101
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTTKIG 141
G V + ++RV +R+ + +E D G LL ++ G
Sbjct: 102 -------PGSSVPPAVDGLLRVHKRIID---GLESDFTHAPSGVAGKVSTKLLVPASQAG 151
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++GK G V ++ S + +L P A DD+++++ G V KAL + + L
Sbjct: 152 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHL 211
Query: 199 -QHLSTMEKSPIC-FNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN-----------PS 245
+ L PI N ++ PH+ + P L P + G P
Sbjct: 212 RKFLVDRGVIPIFEMNMQTANTHHAEHMPPHQSWGPPQGLPPNVGGGSGFGPPSQYMPPP 271
Query: 246 DNASEFHSSS---ADADRD-HPGLDKKGRKQEVAL------------------RMLFSGW 283
++ + DR H G+ GR + + +M
Sbjct: 272 RQLDSYYPPAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQIPLS 331
Query: 284 TASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
A +IG GA + ++ ASGA ++ GE V IS
Sbjct: 332 YADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEIS 372
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML GIIG++G ++ + + A + + +R V ISA E
Sbjct: 42 GWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEE 101
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
+ P + + V R ++ + V+ +LV A G L G V
Sbjct: 102 PGSSVPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTV 161
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ + ++++G E + A Q+D V+++ G+ V AL + LR L
Sbjct: 162 KSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFL 215
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 26/165 (15%)
Query: 3 HHSNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEG 62
+H+ P S ++ P P D V FRL+ P VG +IGR G +I + +T+ RI
Sbjct: 65 NHTGP----SDKKWP-GWPGDCV-FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLD 118
Query: 63 GFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD 122
G G+ RV+L+ G ++ +S +AVIRVF+R+ + + +
Sbjct: 119 GAVGTPDRVVLISGKEELE--------------SPLSPAMDAVIRVFKRV----SGLSEN 160
Query: 123 GDGDDVAYCG--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
D ++C LL +T+ ++GK G + ++ +GA + +L
Sbjct: 161 EDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVL 205
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 244 PSDNAS-EFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA 302
PSD+A+ E + + +D+ PG + R++ IIG++G +++ +
Sbjct: 55 PSDSAAHEPSNHTGPSDKKWPGW-----PGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEE 109
Query: 303 SGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
+ A I + +RVV IS E L++ SP +A + VF R G S E++
Sbjct: 110 TRARIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKR------VSGLSENEDE 163
Query: 363 GDA--VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
A ++ +LV + L G S + +++ TG ++++ G
Sbjct: 164 AKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSG 207
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 128 VLEFIMDKIREKPDL--TNKIVDAESKQTQERDKQVK------------ILVPNSTAGMI 173
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 174 IGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 227
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 228 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 271
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 171/424 (40%), Gaps = 80/424 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + ++ R+ HR V GS+++ I
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDV--------HRKDNV---GSVEKAITI 115
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVG 145
G + A ++ E M + EA G+ C +LA+ IG ++G
Sbjct: 116 Y--------GNPENCTMACKKILEVMQQ-EANSTNKGE-----ICLKILAHNNLIGRIIG 161
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
K G + R+ ++ KI + ++I+D I+ L + ++ V ++++S E
Sbjct: 162 KSGNTIKRIMQDTDTKITV------SSIND----ISSFNL---ERIITVKGSIENMSKGE 208
Query: 206 KSPICFNRPIEKVFYSNSSD-----PHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
S I K+ S +D P FP L P + + N F +A A
Sbjct: 209 -SQIS-----AKLRQSYENDLQALAPQTIMFPGLH--PMAMMSTAGNGMGFTGRTAGATA 260
Query: 261 D---------HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA- 310
+PG + QE + IIG +G +R++ SGA + A
Sbjct: 261 SASGSGATGMYPGSNFPIEVQETTY-LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAP 319
Query: 311 ----APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
P + ER VTI + A L+F + E +GF SG + +
Sbjct: 320 LEADKPQEQQTERKVTIIGTPEAQWK------AQYLIFEKMRE----EGFVSGTDD-VRL 368
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKN 426
V I V + VG + G G V E++ VTG+ IKL E + + I G + +
Sbjct: 369 TVEIFVPSAQVGRIIGKGGQNVRELQRVTGSIIKL--PEHTASAPVDEETTVHIIGPFFS 426
Query: 427 VQNA 430
VQ+A
Sbjct: 427 VQSA 430
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
+FRL+ P VG +IGR G II I T RIH G+ ++L+ R+
Sbjct: 28 AFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRL- 86
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV--- 142
S EAVI VF+R+ + ++G+G + L + T +G
Sbjct: 87 -------------SPAMEAVIEVFKRVTGLYP-IDGNGMCSKASEVKLSSVTFLVGYSQA 132
Query: 143 --VVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
++GK G V + SG + +L P + D+++I+I G L V A+ AV L
Sbjct: 133 LSIIGKEGSRVRAIEESSGTTVGILSRVPFYVSPDERIIKIQGQVLKVMAAMEAV---LY 189
Query: 200 HL 201
HL
Sbjct: 190 HL 191
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 6/192 (3%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
++A A P G + A R++ G IIG+ G I++ + +GA I +
Sbjct: 7 TAASASGRKPAEKWPGWPGQNAFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLP 66
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSV---EVEGQQGFSSGENKGDAVAVSI 370
+ + +V ISA E R SP A + VF R ++G G S ++ +V+
Sbjct: 67 AGTTDCIVLISAKEQPHLRLSPAMEAVIEVFKRVTGLYPIDG-NGMCSKASEVKLSSVTF 125
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
LVG + G S V +E+ +GT + ++ +V + ++ +I+I G+ V A
Sbjct: 126 LVGYSQALSIIGKEGSRVRAIEESSGTTVGILS--RVPFYVSPDERIIKIQGQVLKVMAA 183
Query: 431 LSEVVGRLRHNL 442
+ V+ LR L
Sbjct: 184 MEAVLYHLRLYL 195
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 30/193 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D V FRL+ P VG +IGR G ++ + +T+ RI G G R++L+ G
Sbjct: 8 PGDNV-FRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEP 66
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD-------DVAYCG- 132
+ S +AV+RVF+R V G+GD A+C
Sbjct: 67 E--------------APQSPAMDAVMRVFKR---VSGLSPGEGDNTGSAAAAAGSAFCSI 109
Query: 133 -LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVK 188
LL +++ ++GK G + ++ +GA + ++ P+ A D+++++I G + V
Sbjct: 110 RLLVASSQAINLIGKQGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVF 169
Query: 189 KALVAVTTCLQHL 201
KAL AV L+
Sbjct: 170 KALEAVIGQLRKF 182
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALIS-FAAPLTKSGERVVTISALEYLDTRHS 334
R++ IIG+RG +V+ + + + A I PL S +R+V IS E + S
Sbjct: 13 FRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGIS-DRIVLISGKEEPEAPQS 71
Query: 335 PVQNAAVLVFARSVEVEGQQGFSSGENKGDAV----------AVSILVGADFVGCLTGSG 384
P +A + VF R G S GE ++ +LV + L G
Sbjct: 72 PAMDAVMRVFKRV------SGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQ 125
Query: 385 SSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
S + +++ TG + ++ +++ A ++ +++I GE V AL V+G+LR L
Sbjct: 126 GSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFL 183
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 280 FSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNA 339
F W +IGK+G+ ++ L++ +GA I A P+ + +R V IS+ + S
Sbjct: 508 FLEWKIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRS-CAEL 566
Query: 340 AVLVFARSVEVEGQQGFSSG----ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
A+L + +G S +++G +L+ G L G + + + +
Sbjct: 567 ALLEVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSS 626
Query: 396 GTDIKLVGGEQVLGCAA--QNDVVIQISGEYKNVQNALSEVVGRLRHN 441
++++ +Q+ C+A + D ++QISGE VQ A+ V LR N
Sbjct: 627 SASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 674
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 119/339 (35%), Gaps = 96/339 (28%)
Query: 36 VGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS--GSIDRRIMFCENDVVV 93
+G +IG+ GS I +R +T I ++ R +L+ G DR C ++
Sbjct: 513 IGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRS---CAELALL 569
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA----------YCGLLANTTKIGVV 143
E V+ + + +GDG A LL ++ G +
Sbjct: 570 E----------VVTILLK--------DGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSL 611
Query: 144 VGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATLAVKKALVAVTTCL 198
+GK G N+ +R S A + +LP P C+A D+L+QI+G AV+ A+ V L
Sbjct: 612 IGKAGANIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANL 671
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSD---------PHRE----------------FFPH 233
+ E P P K Y D PH PH
Sbjct: 672 RDNPPKETVP---TNPEAKTAYFLGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGLQPH 728
Query: 234 -----------LSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSG 282
L+ PPL NP A R P L K V+ M
Sbjct: 729 PLAGPAYAGGVLAQAPPLYANP-------------AARLPPMLPK------VSAEMSVPS 769
Query: 283 WTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
G+IGK G + +++ SGA I S ER +
Sbjct: 770 SVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTI 808
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
LL ++IG ++GKGG N+ +MR ESGA+I +P P CA D+L+ I+G AVK
Sbjct: 53 LLVANSQIGSLIGKGGNNIQKMRTESGAQI-QIPRKDELPGCAFSFDELVVISGDAKAVK 111
Query: 189 KALVAVTTCLQHLSTMEKSP 208
KAL +V+ L E+ P
Sbjct: 112 KALYSVSAFLYKHPPKEQIP 131
Score = 38.9 bits (89), Expect = 7.0, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
+LV +G L G G + + +M +G I++ +++ GCA D ++ ISG+ K V+
Sbjct: 53 LLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKK 112
Query: 430 ALSEV 434
AL V
Sbjct: 113 ALYSV 117
>gi|313226221|emb|CBY21364.1| unnamed protein product [Oikopleura dioica]
Length = 545
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 97/448 (21%), Positives = 182/448 (40%), Gaps = 92/448 (20%)
Query: 6 NPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIR--RDTKCRI--HCE 61
+P+G+ + RG + P +++ P VVG +IG+ GS + I +D++ R+ H
Sbjct: 168 SPFGFGA--RGSPDTP-----LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRR 220
Query: 62 GGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
G PGSD +V + G+ + A IR+ E + + E
Sbjct: 221 EG-PGSD-KVATIYGAPE--------------------ACGAAAIRILEIVRKEEK---- 254
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQI 180
D+ +LA+ IG ++G+ GRN+ ++ ++G +I + + + D+ I I
Sbjct: 255 ----DNELPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELSPYNMDRTISI 310
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL 240
G + +A +T L+ T + + + ++ Y + + FP L
Sbjct: 311 HGEVKGISEAEQQITEKLRQFET-DMAAMS-----QQSLYPGLNSQQMQMFPGLQ---SP 361
Query: 241 TGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQ 300
T P+ N S +SS++ QE ++ SG IIG RG +R++
Sbjct: 362 TAPPAYNVSYQGNSSSN------------NTQETVTLLIPSG-AVGAIIGSRGTHIRNIS 408
Query: 301 NASGALISFAAPLTKSGE-------RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ 353
+GA I A ++ + RV + E Q A ++ EG
Sbjct: 409 RIAGASIRIHALEGENADADRDAKARVTIVGVPES--------QWKAQFCIFDKLKQEGW 460
Query: 354 QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL-VGGEQVLGCAA 412
G G + I + VG + G G V E++ +T +++ + GE
Sbjct: 461 FGNEEGR-----LTTQITIPGKLVGRIIGKGGVNVRELQRITSSEVTIPRQGE----LNT 511
Query: 413 QNDVVIQISGEY---KNVQNALSEVVGR 437
++ + I+G + ++ Q + ++VGR
Sbjct: 512 SEEIPVSITGTFFSNQSAQRKIRDLVGR 539
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 31/212 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 148 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 207
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M D + E ++ T + V ++ E + +V+ +L + G++
Sbjct: 208 VMEFIMDKIREKPDL--TNKIVDTDSKQTQERDKQVK------------ILVPNSTAGMI 253
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ESG+ + + P ++ ++ I I G K A C LS
Sbjct: 254 IGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKNA------CKMILSK 307
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFP 232
+ + P C N V Y++ S P F P
Sbjct: 308 IVEDPQSGTCLN-----VSYADVSGPVANFNP 334
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP----PACAAIDDQLIQITGATLAVK 188
LL ++IG ++GKGG N+ +MR ESGA+I +P P CA D+L+ I+G AVK
Sbjct: 53 LLVANSQIGSLIGKGGNNIQKMRTESGAQI-QIPRKDELPGCAFSFDELVVISGDAKAVK 111
Query: 189 KALVAVTTCLQHLSTMEKSP 208
KAL +V+ L E+ P
Sbjct: 112 KALYSVSAFLYKHPPKEQIP 131
Score = 38.9 bits (89), Expect = 7.2, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
+LV +G L G G + + +M +G I++ +++ GCA D ++ ISG+ K V+
Sbjct: 53 LLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKK 112
Query: 430 ALSEV 434
AL V
Sbjct: 113 ALYSV 117
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 38/203 (18%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
+R P P D V FRLV P VG +IGR G +I + +TK R+ G G+ R++L
Sbjct: 37 KRWP-GWPGDSV-FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVL 94
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD------- 126
V G D E+ +A++RVF+ V G DG
Sbjct: 95 VSGKEDPDL--------------ELPPAMDALMRVFK-------XVTGITDGAAEXTQAA 133
Query: 127 ---DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLI 178
DV LL + ++GK G + ++ + A I ++ P D++++
Sbjct: 134 ATPDVCAARLLVPGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIV 193
Query: 179 QITGATLAVKKALVAVTTCLQHL 201
+I G T V KAL AV+ L+
Sbjct: 194 EIQGDTEKVLKALQAVSNHLRKF 216
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%)
Query: 278 MLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQ 337
ML IIG++G ++ + + A I + ER V +SA E D+ P
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 338 NAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGT 397
+ + V R ++ ++ G V+ +LV A G L G V +++ +
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 398 DIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
++++G E + A Q+D V+++ GE V A+ + LR L
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFL 165
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 128/349 (36%), Gaps = 81/349 (23%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCE 88
++ P VG +IGR G I I +T+ RI G PG+ R ++V D +
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSL---- 56
Query: 89 NDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDDVAYCG-------LLANTTKI 140
+ ++RV +R+ ++G D D + LL ++
Sbjct: 57 ----------PPAMDGLLRVHKRI------IDGLDSDSSNTPPTSGAKVSTRLLVPASQA 100
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTC 197
G ++GK G V ++ S + +L P A DD+++++ G V KA+ + +
Sbjct: 101 GSLIGKQGGTVKSIQEASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASH 160
Query: 198 LQHLSTMEKSPICFNRPIEKVF-----YSNSS----DPHREFFPHLSLVPPLTGNPSDNA 248
L+ +R I +F SN S PH+ + P L P G P
Sbjct: 161 LRKF--------LVDRSIIPLFEMQMQMSNPSMEQMPPHQSWGPPQPLPPNHGGGPGYGQ 212
Query: 249 S--------EFHSSSADAD-------RDHPGLDKKGRK------------------QEVA 275
+ + + AD + H G+ GR+ ++
Sbjct: 213 NPQYMPPPRQLDNYYPPADMPPLMEKQPHQGISAYGREAPMGSHASSNAQAAPSMITQIT 272
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
+M A +IG GA + ++ ASGA ++ G V IS
Sbjct: 273 QQMQIPLSYADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEIS 321
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 217 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 265
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 266 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 313
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 314 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 365
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 366 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSMLPPPAGPRGVPPAPPYHPFATHSG 425
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 426 YFSSLYPPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 485
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 486 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 534
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 535 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 591
Query: 430 ALSEV 434
A ++
Sbjct: 592 AQRKI 596
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D V FRL+ P VG +IGR G ++ + +T+ RI G G R++L+ G
Sbjct: 50 PGDNV-FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEP 108
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD---------DVAYC 131
+ +S +AV+RVF+R V G+GD A+C
Sbjct: 109 E--------------APLSPAMDAVLRVFKR---VSGLSPGEGDNTGSAAAAAAAGSAFC 151
Query: 132 G--LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLA 186
LL +++ ++GK G + ++ +G + ++ P A D+++++I G +
Sbjct: 152 SIRLLVASSQAINLIGKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMK 211
Query: 187 VKKALVAVTTCLQHL 201
V KAL AV L+
Sbjct: 212 VFKALEAVIGHLRKF 226
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 18/179 (10%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
R++ IIG++G +V+ + + + A I +R+V IS E + SP
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLSP 114
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAV------------AVSILVGADFVGCLTGS 383
+A + VF R G S GE ++ +LV + L G
Sbjct: 115 AMDAVLRVFKRV------SGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGK 168
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
S + +++ TG ++++ + + A ++ +++I GE V AL V+G LR L
Sbjct: 169 QGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKFL 227
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 129/349 (36%), Gaps = 76/349 (21%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VGG+IGR G I I +T+ R+ G PG+ R +++
Sbjct: 46 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEE------- 98
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTTKIG 141
G V + ++R+ +R+ + +E D G LL ++ G
Sbjct: 99 -------PGSSVPPAVDGLLRIHKRIID---GLESDFTHAPSGVAGKVSTKLLVPASQAG 148
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++GK G V ++ S + +L P A DD+++++ G V KAL + + L
Sbjct: 149 SLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHL 208
Query: 199 QHLSTMEKSPICFNRPIEKVFYSN--SSDPHR--EFFPHLSLVPPLTGN----------- 243
+ +R + +F N +++PH PH S P
Sbjct: 209 RKF--------LVDRGVIPIFEMNMQTANPHHAEHMPPHQSWGPSQGLPPNVGGGPGFGP 260
Query: 244 ------PSDNASEFHSSS---ADADRD-HPGLDKKGRKQEVAL----------------- 276
P ++ S+ DR H G+ GR + +
Sbjct: 261 PSQYMPPPRQLDSYYPSAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQIT 320
Query: 277 -RMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
+M A +IG GA + ++ ASGA ++ GE V IS
Sbjct: 321 QQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEIS 369
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML GIIG++G ++ + + A + + +R V ISA E
Sbjct: 39 GWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEE 98
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
+ P + + + R ++ + V+ +LV A G L G V
Sbjct: 99 PGSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTV 158
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ + ++++G E + A Q+D V+++ G+ V AL + LR L
Sbjct: 159 KSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFL 212
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 7/168 (4%)
Query: 280 FSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNA 339
F W +IGK+G+ ++ L++ +GA I A P+ + +R V IS+ + + + A
Sbjct: 509 FLEWKIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELA 568
Query: 340 AVLVFARSVEVEGQQGFSSG----ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
+ V ++ +G S +++G +L+ G L G + + + +
Sbjct: 569 LLEVVTILLK-DGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSS 627
Query: 396 GTDIKLVGGEQVLGCAA--QNDVVIQISGEYKNVQNALSEVVGRLRHN 441
++++ +Q+ C+A + D ++QISGE VQ A+ V LR N
Sbjct: 628 SASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 675
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 117/339 (34%), Gaps = 96/339 (28%)
Query: 36 VGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEG 95
+G +IG+ GS I +R +T I ++ R +L+ EG
Sbjct: 514 IGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKN---------------EG 558
Query: 96 GEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA------------YCGLLANTTKIGVV 143
G + E + EV + DGDG + LL ++ G +
Sbjct: 559 GSDRTCAELALL------EVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSL 612
Query: 144 VGKGGRNVTRMRIESGAKIVMLPP---PACAAI--DDQLIQITGATLAVKKALVAVTTCL 198
+GK G N+ +R S A + +LP P C+A D+L+QI+G AV+ A+ V L
Sbjct: 613 IGKAGANIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANL 672
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSD---------PHRE----------------FFPH 233
+ E P P K Y D PH PH
Sbjct: 673 RDNPPKETVPTT---PEAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQPH 729
Query: 234 -----------LSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSG 282
L+ PPL NP A R P L K V+ M
Sbjct: 730 PLAGPAYAGGVLAQAPPLYANP-------------AARLPPMLPK------VSAEMSVPS 770
Query: 283 WTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
G+IGK G + +++ SGA I S ER +
Sbjct: 771 SVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVERTI 809
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 19/201 (9%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVT 322
+ KG Q ++ML + A +IGK G+I+ S++N +G + + + + ERV+
Sbjct: 10 NNKGTSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLV 69
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA--VAVSILVGADFVGCL 380
+ + + NA +++ + ++ Q F +N A I+V V +
Sbjct: 70 LCG------KQEQINNALLIILDKIRQITT-QNFQDKQNINTAPKYTCRIVVPKSAVSAI 122
Query: 381 TGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRH 440
G G + +++D TG I++ E L N+ +I I G ++++ + +V +++
Sbjct: 123 IGKGGQQIKQLQDSTGAKIQISSREDGL-----NERIISIIGPFESISDTAIKVTNSIQN 177
Query: 441 NLKSGEILN--EARPRSPSGR 459
+ ++LN ++ S +GR
Sbjct: 178 DPNLKDLLNVIYSKDTSMNGR 198
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH---CEGGFPGSDHRVILVVGSGSIDRRI 84
+++ V G +IG++GSII+SI T C + FP + RV+++
Sbjct: 21 KMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLC--------- 71
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA---YCGLLANTTKIG 141
G+ A++ + +++ ++ + D + A C ++ + +
Sbjct: 72 -----------GKQEQINNALLIILDKIRQITTQNFQDKQNINTAPKYTCRIVVPKSAVS 120
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
++GKGG+ + +++ +GAKI + +++++I I G ++ + VT +Q+
Sbjct: 121 AIIGKGGQQIKQLQDSTGAKIQI--SSREDGLNERIISIIGPFESISDTAIKVTNSIQN 177
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 17/178 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +++ RI G PG R +++ D
Sbjct: 128 FRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL--- 184
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGD-DVAYCGLLANTTKIGVVV 144
VS + ++RV +R+ + +++E + G V LL ++ G ++
Sbjct: 185 -----------VSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLI 233
Query: 145 GKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
GK G + ++ S + +L P A DD++++I G L V KA+ + + L+
Sbjct: 234 GKQGATIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLRKF 291
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 75/185 (40%), Gaps = 4/185 (2%)
Query: 266 DKK--GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
DKK G E R+L +IG++G ++ + S A I ER V I
Sbjct: 116 DKKWPGWPGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMI 175
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
SA + D SP + + V R + + G +LV A G L G
Sbjct: 176 SAKDEPDALVSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGK 235
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLK 443
+ + ++D + ++++ E V A +D V++I GE +V A+ + LR L
Sbjct: 236 QGATIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHLRKFLV 293
Query: 444 SGEIL 448
+L
Sbjct: 294 DRSVL 298
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IIG++G +V+ + +GA I + +R+V IS E D + SP +A VF R
Sbjct: 68 IIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVSPAMDAVFRVFKRV 127
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
+EG + + +L+ + L G S + E+++ +G ++++ + V
Sbjct: 128 AGLEGGDP-GAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQERSGASLRVLSEDDV 186
Query: 408 LGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ A ++ +++I GE V +A VV +LR L
Sbjct: 187 VPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFL 221
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
P D V +RLV P VG +IGR G ++ + T RI G G+ R++L+ G
Sbjct: 50 WPGDNV-YRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGRED 108
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD----GDDVAYCG--L 133
D +VS +AV RVF+R+ A +EG GD A+C L
Sbjct: 109 PD--------------AQVSPAMDAVFRVFKRV----AGLEG-GDPGAAAAGFAFCSFKL 149
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP-----PPACAAIDDQLIQITGATLAVK 188
L +++ ++G+ G + ++ SGA + +L P A A D+++++I G L V
Sbjct: 150 LMASSQAVHLIGRHGSTIKEIQERSGASLRVLSEDDVVPYATA--DERIVEIRGEGLKVL 207
Query: 189 KALVAVTTCLQHL 201
A AV L+
Sbjct: 208 DAFEAVVRQLRKF 220
>gi|344232044|gb|EGV63923.1| hypothetical protein CANTEDRAFT_104592 [Candida tenuis ATCC 10573]
Length = 408
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 135/326 (41%), Gaps = 55/326 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
+ ++++RL+ + G LIG+SGS+I+SIR++T + + R++ V SG++D
Sbjct: 94 NALINYRLLISSKESGCLIGQSGSVINSIRQETDTKAGISKLLAHTQERILTV--SGTLD 151
Query: 82 ---RRIMFCENDVV------------VEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD 126
+ I + ++ G + S+ E R + + G
Sbjct: 152 NCSKAISYFSQALIEAQQHEADAASTASAGPMPSSVEEYPHFPLRQLSIHKNIAGHS--- 208
Query: 127 DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITG 182
LL +++G ++G G + R++ G ++ LP +++L+++ G
Sbjct: 209 --TVLRLLIPNSQMGTIIGAKGARIQRIQQVFGVSMIASKSFLP-----GSNERLVELQG 261
Query: 183 ATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG 242
+ + AL ++ CL +E F + +Y P R P + +V PL
Sbjct: 262 SVPELYAALRVISRCL-----IED----FGGVVGTSYY--VPRPRR---PDVPVVAPL-- 305
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA 302
P + + A P + V M FS +IGK G+ ++ ++
Sbjct: 306 -PVSAPAAPGTGPASDSSSSPA-------RLVTTSMAFSKDIVGALIGKSGSRIQGVRKI 357
Query: 303 SGALISFAAPLTKSGERVVTISALEY 328
SGA+I + L S ER+ TIS Y
Sbjct: 358 SGAIIGISDELEGSSERIFTISGSTY 383
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 46 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 105
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ + E++ + D +L + G++
Sbjct: 106 VLDFIMDKIREKPDLTT----------KIIDAESKQTQERD----KQVKILVPNSTAGMI 151
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + P ++ ++ I I G K A C LS
Sbjct: 152 IGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 205
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 206 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 249
>gi|390177070|ref|XP_003736272.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388858896|gb|EIM52345.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 266 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 325
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ + E++ + D +L + G++
Sbjct: 326 VLDFIMDKIREKPDLTT----------KIIDAESKQTQERDKQ----VKILVPNSTAGMI 371
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + P ++ ++ I I G K A C LS
Sbjct: 372 IGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 425
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 426 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 472
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 111/304 (36%), Gaps = 52/304 (17%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSID 81
+S P +VG +IGR G I+ ++ ++ C+I GG P D
Sbjct: 125 LSEEYAVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSGGLP---------------D 169
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
R N +E + + R+ ER +G G GD L+ + K+G
Sbjct: 170 RMCTLTGNPQAIE-----RAKALIDRIIERGQGPAVGSDG-GLGDGNTTIELMIPSNKVG 223
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
+V+GKGG + +++ +G K+VM+ + D+ ++++G K A V +
Sbjct: 224 LVIGKGGEMIKKLQERAGVKMVMIQDATTSGTSDKPLRVSGDPQKCKHARELVNELI--- 280
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR- 260
+ +P E F + G + R
Sbjct: 281 -------------------GDKDNPGMEMFGER-----MDGGYDRERDDDRDFERRGGRG 316
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERV 320
D+ ML + +IG+ G +++ +QN +GA I F S ER+
Sbjct: 317 DYGPRMGGPPGGGGGFEMLVPRFAVGIVIGRGGDMIKKIQNETGARIQFRPDDGHSPERL 376
Query: 321 VTIS 324
IS
Sbjct: 377 AVIS 380
>gi|390177064|ref|XP_003736269.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858893|gb|EIM52342.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 554
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 52 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 111
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ + E++ + D +L + G++
Sbjct: 112 VLDFIMDKIREKPDLTT----------KIIDAESKQTQERDKQ----VKILVPNSTAGMI 157
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + P ++ ++ I I G K A C LS
Sbjct: 158 IGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 211
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 212 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 258
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 244 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 303
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ + E++ + D +L + G++
Sbjct: 304 VLDFIMDKIREKPDLTT----------KIIDAESKQTQERDKQ----VKILVPNSTAGMI 349
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + P ++ ++ I I G K A C LS
Sbjct: 350 IGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 403
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 404 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 447
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 122
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
++ D + E ++++ ++ + E++ + D +L +
Sbjct: 123 EGIMTVVDFIMDKIREKPDLTT----------KIIDAESKQAQERD----KQVKILVPNS 168
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GKGG + +++ ESG+ + + P ++ ++ I I G K A C
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CK 222
Query: 199 QHLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSS 254
LS + + P C N V Y++ + P F P TG+P + N + +SS
Sbjct: 223 MILSKIVEDPQSGTCLN-----VSYADVNGPVANFNP--------TGSPYATNQNAINSS 269
Query: 255 SA 256
+A
Sbjct: 270 TA 271
>gi|125773159|ref|XP_001357838.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54637571|gb|EAL26973.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 570
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 127
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ + E++ + D +L + G++
Sbjct: 128 VLDFIMDKIREKPDLTT----------KIIDAESKQTQERD----KQVKILVPNSTAGMI 173
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + P ++ ++ I I G K A C LS
Sbjct: 174 IGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 227
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSA 256
+ + P C N V Y++ S P F P TG+P + N + +SS+A
Sbjct: 228 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTA 271
>gi|334349275|ref|XP_003342183.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1-like [Monodelphis domestica]
Length = 676
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 52/235 (22%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 51 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDAFGGQLPPMHQQQRSVMTEEYKVPDGMVG 109
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 110 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 151
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 152 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 207
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPI 209
+ +G K+VM+ D+ ++ITG V+ + + + L + K PI
Sbjct: 208 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQVSQQLILRIIXELGGLHKVPI 262
>gi|390177066|ref|XP_003736270.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388858894|gb|EIM52343.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 74 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 133
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ + E++ + D +L + G++
Sbjct: 134 VLDFIMDKIREKPDLTT----------KIIDAESKQTQERDKQ----VKILVPNSTAGMI 179
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + P ++ ++ I I G K A C LS
Sbjct: 180 IGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 233
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 234 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 280
>gi|195158519|ref|XP_002020133.1| GL13824 [Drosophila persimilis]
gi|194116902|gb|EDW38945.1| GL13824 [Drosophila persimilis]
Length = 554
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 74 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMV 133
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ D + E ++++ ++ + E++ + D +L + G++
Sbjct: 134 VLDFIMDKIREKPDLTT----------KIIDAESKQTQERDKQ----VKILVPNSTAGMI 179
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + P ++ ++ I I G K A C LS
Sbjct: 180 IGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CKMILSK 233
Query: 204 MEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSSSADAD 259
+ + P C N V Y++ S P F P TG+P + N + +SS+A +
Sbjct: 234 IVEDPQSGTCLN-----VSYADVSGPVANFNP--------TGSPYATNQNAINSSTASLN 280
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 130/321 (40%), Gaps = 61/321 (19%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV 237
+ ++G V KA+ A+ +Q + +S C N + Y+N + P P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGPVANSNP----- 226
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
TG+P + ++ + SA E+A+ G I+GK G +
Sbjct: 227 ---TGSPYASPADLAAESAK------------ELVEIAVPENLVG----AILGKGGKTLV 267
Query: 298 SLQNASGALISFAAPLTKSGE 318
Q +GA I ++K GE
Sbjct: 268 EYQELTGARIQ----ISKKGE 284
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 122
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
++ D + E ++++ ++ + E++ + D +L +
Sbjct: 123 EGIMTVVDFIMDKIREKPDLTT----------KIIDAESKQAQERD----KQVKILVPNS 168
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GKGG + +++ ESG+ + + P ++ ++ I I G K A C
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CK 222
Query: 199 QHLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSS 254
LS + + P C N V Y++ + P F P TG+P + N + +SS
Sbjct: 223 MILSKIVEDPQSGTCLN-----VSYADVNGPVANFNP--------TGSPYATNQNAINSS 269
Query: 255 SA 256
+A
Sbjct: 270 TA 271
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 122
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
++ D + E ++++ ++ + E++ + D +L +
Sbjct: 123 EGIMTVVDFIMDKIREKPDLTT----------KIIDAESKQAQERD----KQVKILVPNS 168
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GKGG + +++ ESG+ + + P ++ ++ I I G K A C
Sbjct: 169 TAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIGDKENNKNA------CK 222
Query: 199 QHLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSS 254
LS + + P C N V Y++ + P F P TG+P + N + +SS
Sbjct: 223 MILSKIVEDPQSGTCLN-----VSYADVNGPVANFNP--------TGSPYATNQNAINSS 269
Query: 255 SA 256
+A
Sbjct: 270 TA 271
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 186/446 (41%), Gaps = 74/446 (16%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
GY S R + P R++ PT VG +IG+ G+ I + + T+ ++
Sbjct: 188 GYGSPRPRQHDFP-----LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-------- 234
Query: 69 HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDD 127
HR +G+ ++ I + ST E + ++ + E +D
Sbjct: 235 HRK---ENAGAAEKPIT------------IHSTPEGCSAACRMILDIMQKEANETKTTED 279
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
+ +LA+ + +G ++GK GRN+ ++ ++G KI + +++ D I T+ V
Sbjct: 280 IP-LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITI------SSLQDLTIYNPERTITV 332
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLT 241
K ++ A C + +K + I + + P F L ++PP
Sbjct: 333 KGSIDAC--CKAEVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAA 390
Query: 242 GNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQ 300
G S + A A + ++ +QEV LF A G +IGK+G ++ L
Sbjct: 391 GPRS-------AVPAVAPAGYNPFLQQAPEQEVV--YLFIPTQAVGALIGKKGQHIKQLA 441
Query: 301 NASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
+ +GA I A A ER+V I+ + A +F + E + FS+
Sbjct: 442 HFAGASIKIAPAESPDVTERMVIITGTPEAQFK------AQGRIFGKLKE---ENFFSAK 492
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVI 418
E + I V + G + G G V+E++++T ++ +V +Q +ND V +
Sbjct: 493 EEV--KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ---TPDENDEVFV 546
Query: 419 QISGEY---KNVQNALSEVVGRLRHN 441
+ISG + + Q + E++ +++
Sbjct: 547 KISGHFFASQTAQRKIREIIQQVKQQ 572
>gi|390335395|ref|XP_003724137.1| PREDICTED: far upstream element-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 689
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 39/186 (20%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC--EGGFPGSDHRVILVVGSGSIDRRIMF 86
P +VG +IGR G ISS++ ++ C I E G G DR++
Sbjct: 142 FFVPNKMVGLIIGRQGQQISSLQSESGCNIQIAPENGISG--------------DRQVTL 187
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEV-----EAEVEGDGDGDDVAYCGLLANTTKIG 141
+ T EAV+ + ++ + E EG+ D +L TK+G
Sbjct: 188 ------------TGTPEAVMHAKSLILDIVNKASQNEAEGNMTVD------MLIPATKVG 229
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
+V+GKGG + +++ ++G ++VM+ A D+ ++I+G + +++A V+ +++
Sbjct: 230 LVIGKGGETIKQLQEQAGVRMVMIQEGPVATGMDKPLRISGDSQKIEEAKRLVSEVMENA 289
Query: 202 STMEKS 207
++S
Sbjct: 290 KNNDRS 295
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IIG++G + SLQ+ SG I A SG+R VT++ ++ A+S
Sbjct: 152 IIGRQGQQISSLQSESGCNIQIAPENGISGDRQVTLTGT------------PEAVMHAKS 199
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
+ ++ S E +G+ + V +L+ A VG + G G + ++++ G + ++ Q
Sbjct: 200 LILDIVNKASQNEAEGN-MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMI---QE 255
Query: 408 LGCAAQNDVVIQISGEYKNVQNA---LSEVVGRLRHNLKS 444
A D ++ISG+ + ++ A +SEV+ ++N +S
Sbjct: 256 GPVATGMDKPLRISGDSQKIEEAKRLVSEVMENAKNNDRS 295
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML IIG++G ++ L + A I + ER V +SA E
Sbjct: 35 GWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEE 94
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D +P + + V ++VE ++G V+ +LV A G L G + +
Sbjct: 95 PDAPIAPAIDGLLRVHKCIMDVESDVPSAAGV----MVSTRLLVVAAQAGSLIGKQGATI 150
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ + ++++ GE + A QND V++I GE +V A+ + LR L
Sbjct: 151 KSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFL 203
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +TK RI G PG+ R ++V D
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPD----- 96
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
++ + ++RV + + +VE++V G V+ LL + G ++GK
Sbjct: 97 ---------APIAPAIDGLLRVHKCIMDVESDVPS-AAGVMVS-TRLLVVAAQAGSLIGK 145
Query: 147 GGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
G + ++ S + +L P A +D +++I G +V KA+ + + L+
Sbjct: 146 QGATIKSIQEASNCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKF--- 202
Query: 205 EKSPICFNRPIEKVFYSNSSDPHRE 229
+R + KVF P+ +
Sbjct: 203 -----LVDRSVIKVFEMEMQKPNTQ 222
>gi|390335391|ref|XP_003724135.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 695
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 39/186 (20%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC--EGGFPGSDHRVILVVGSGSIDRRIMF 86
P +VG +IGR G ISS++ ++ C I E G G DR++
Sbjct: 128 FFVPNKMVGLIIGRQGQQISSLQSESGCNIQIAPENGISG--------------DRQVTL 173
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEV-----EAEVEGDGDGDDVAYCGLLANTTKIG 141
+ T EAV+ + ++ + E EG+ D +L TK+G
Sbjct: 174 ------------TGTPEAVMHAKSLILDIVNKASQNEAEGNMTVD------MLIPATKVG 215
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
+V+GKGG + +++ ++G ++VM+ A D+ ++I+G + +++A V+ +++
Sbjct: 216 LVIGKGGETIKQLQEQAGVRMVMIQEGPVATGMDKPLRISGDSQKIEEAKRLVSEVMENA 275
Query: 202 STMEKS 207
++S
Sbjct: 276 KNNDRS 281
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARS 347
IIG++G + SLQ+ SG I A SG+R VT++ ++ A+S
Sbjct: 138 IIGRQGQQISSLQSESGCNIQIAPENGISGDRQVTLTGT------------PEAVMHAKS 185
Query: 348 VEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQV 407
+ ++ S E +G+ + V +L+ A VG + G G + ++++ G + ++ Q
Sbjct: 186 LILDIVNKASQNEAEGN-MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMI---QE 241
Query: 408 LGCAAQNDVVIQISGEYKNVQNA---LSEVVGRLRHNLKS 444
A D ++ISG+ + ++ A +SEV+ ++N +S
Sbjct: 242 GPVATGMDKPLRISGDSQKIEEAKRLVSEVMENAKNNDRS 281
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
++ P VG +IGR G +I I+ TK R+ + G + RV L+ GS
Sbjct: 296 VIVPKHAVGMVIGRGGDMIKRIQEQTKARVQFKPGDRDAPERVALITGS 344
>gi|57529674|ref|NP_001006535.1| far upstream element-binding protein 1 [Gallus gallus]
gi|53136708|emb|CAG32683.1| hypothetical protein RCJMB04_32l4 [Gallus gallus]
Length = 627
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 98/235 (41%), Gaps = 52/235 (22%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 52 NSNDYGYGGQKR-PLKDGDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMTEEYKVPDGMVG 110
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 111 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 152
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 153 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 208
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPI 209
+ +G K+VM+ D+ ++ITG V++A V ++ + PI
Sbjct: 209 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVPI 263
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
H ++ D+ PG E R+L +IG++G ++ + S A I
Sbjct: 90 HDATVPDDKKWPGWPG-----ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLE 144
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR---SVEVEGQQGFSSGENKGDAVAV 368
ER V ISA + DT P + + V R +E E Q + N G
Sbjct: 145 GPPAVPERAVMISAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTG---PT 201
Query: 369 SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQ 428
+LV A G L G + + ++D + +++V E V A +D V++I GE +
Sbjct: 202 RLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSH 259
Query: 429 NALSEVVGRLRHNLKSGEIL 448
A+ + LR L +L
Sbjct: 260 KAVELIASHLRKFLVDRSVL 279
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ PT VG +IGR G I + +++ RI G P R +++ D
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDT---- 164
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG---LLANTTKIGVV 143
E+ + ++RV R+ + E E D G LL ++ G +
Sbjct: 165 ----------ELPPAVDGLLRVHRRITD-GLETETDQPQRATVNTGPTRLLVPASQAGSL 213
Query: 144 VGKGGRNVTRMRIESGAKIVM-----LPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+GK G + I+ +K V+ +PP A DD++++I G KA+ + + L
Sbjct: 214 IGKQGATIK--SIQDASKCVLRIVENVPP--VALNDDRVVEIQGEPHDSHKAVELIASHL 269
Query: 199 QHL 201
+
Sbjct: 270 RKF 272
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 171/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 242
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 243 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 290
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 291 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 342
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP +G +P S
Sbjct: 343 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFATHSG 402
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 403 YFSSLYPHHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 462
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 463 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 511
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 512 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 568
Query: 430 ALSEV 434
A ++
Sbjct: 569 AQRKI 573
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 180/444 (40%), Gaps = 67/444 (15%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
Y SS + PL+ P R++ PT VG +IG+ G I ++ + T+ ++
Sbjct: 260 YPGSSTQPKPLDFP-----LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDI------- 307
Query: 68 DHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDD 127
HR +G+ ++ I EG + EA + E M + E + ++
Sbjct: 308 -HRK---ENAGAAEKPITI---HATPEG-----SSEACRLILEIM---QKEADETKSAEE 352
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
+ +LA+ + +G ++GK GRN+ ++ ++G KI + P + D I T+ V
Sbjct: 353 IPL-KILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISP------LQDLTIYNPERTITV 405
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLT 241
K ++ A + + M+K + + V + P F LS++P
Sbjct: 406 KGSIEACSNA--EVEIMKKLREAYENDVVAVNQQANLIPGLNLSALGIFSTGLSMLPSTA 463
Query: 242 G----------NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGK 291
G NP + S + S A R + ++ + + IIGK
Sbjct: 464 GPHGATAASPYNPFASHSPYLSGLYGASRVGAFPHQHSVPEQEVVNLFIPTQAVGAIIGK 523
Query: 292 RGAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEV 350
+G ++ L +GA I A A + ER+V I+ + A +F + E
Sbjct: 524 KGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFK------AQGRIFGKLKE- 576
Query: 351 EGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGC 410
+ F+ E + I V + G + G G V+E++++T ++ +V +Q
Sbjct: 577 --ENFFNPKEEV--KLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD- 630
Query: 411 AAQNDVVIQISGEYKNVQNALSEV 434
+V+++I G + Q A ++
Sbjct: 631 -ENEEVIVKIIGHFFASQTAQRKI 653
>gi|428180127|gb|EKX48995.1| hypothetical protein GUITHDRAFT_68316, partial [Guillardia theta
CCMP2712]
Length = 276
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+L+ G +IG+SGS I S++ T C+I FPG+ RV+L+ G+
Sbjct: 1 VQLLVSNKDAGTVIGKSGSTIQSVQSRTGCKIRISNNNDFFPGTQDRVLLITGT---TEA 57
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+M ++ E E + T E E D DV L+ T GV+
Sbjct: 58 VMMGAKAIITELLENNHTGE--------------ENPVDPATKDVVITMLVPEKTS-GVI 102
Query: 144 VGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAV 194
+GKGG N+ M ESGAK+ + +D++++ G K+A+ V
Sbjct: 103 IGKGGENIKHMIEESGAKMKLNSKDTKIPGLDERVLTCDGKLANAKRAMEMV 154
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI------HCEGGFPGSDHRVILVVGSGSI 80
FRLV P VGG+IGR G I + +T+ R+ H +G F R++LV +
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAF----SRIVLVSAREEV 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD----GDDVAYCGLLAN 136
+ E+S A I++F+ + E+E ++ DG +++ LL
Sbjct: 156 E--------------AELSPAMNAAIKIFKHINEIE-DINSDGTLMAPAPEISSVRLLVP 200
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAA---IDDQLIQITGATLAVKKALVA 193
+ V+GK G + ++ +G+ + ++ + + +++++I GA+L V AL
Sbjct: 201 FAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKL 260
Query: 194 VTTCLQHL 201
V L+
Sbjct: 261 VLGLLRKF 268
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALIS-FAAPLTKSG-ERVVTISALEYLDTRH 333
R++ GIIG+RG ++ L + + A + AP R+V +SA E ++
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAEL 159
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS---ILVGADFVGCLTGSGSSAVSE 390
SP NAA+ +F E+E S G A +S +LV + G +
Sbjct: 160 SPAMNAAIKIFKHINEIEDIN--SDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKS 217
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
+++ TG+ ++++ +++L + +++I+G V NAL V+G LR L +L+
Sbjct: 218 IQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHL 277
Query: 451 ARPRSP 456
++P
Sbjct: 278 FERKNP 283
>gi|312380039|gb|EFR26147.1| hypothetical protein AND_07973 [Anopheles darlingi]
Length = 552
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 35/239 (14%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D F+ + P+ G +IG+ G I+S+++D R+ +PG+ RV L+ SG+
Sbjct: 39 DNYHFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKSHDFYPGTTERVCLI--SGT 96
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
+D + D +++ IR M + E + + +L +
Sbjct: 97 VDGILTVL--DFIIDK----------IREKPDMTKALTEADAKQAQERDKQVKILVPNST 144
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+++GK G + +++ ESG+ + + P + ++ I I G K VA L
Sbjct: 145 AGMIIGKAGAYIKQIKEESGSYVQISQKPKDLTLQERCITIIGEKENNK---VACKMILA 201
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP--SDNASEFHSSSA 256
+ S C N V Y++ + P F P TG+P + F SS+A
Sbjct: 202 KIVEDPSSGTCLN-----VSYADINGPVANFNP--------TGSPFAASQTPNFSSSTA 247
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 139/348 (39%), Gaps = 61/348 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI------HCEGGFPGSDHRVILVVGSGSI 80
FRLV P VGG+IGR G I + +T+ R+ H +G F R++LV +
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAF----SRIVLVSAREEV 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD----GDDVAYCGLLAN 136
+ E+S A I++F+ + E+E ++ DG +++ LL
Sbjct: 156 E--------------AELSPAMNAAIKIFKHINEIE-DINSDGTLMAPAPEISSVRLLVP 200
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAA---IDDQLIQITGATLAVKKALVA 193
+ V+GK G + ++ +G+ + ++ + + +++++I GA+L V AL
Sbjct: 201 FAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKL 260
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSS-DPHREFFPHLSLVPPLTG-NPSDNASEF 251
V L+ F R +V S +P F L G +PS +A
Sbjct: 261 VLGLLRKFLVDHGVLHLFERKNPEVAQPQSRGNPKGSRF--------LYGHDPSFHAPYS 312
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
S AD + K R ++ L IIG RG V +++ SGA++
Sbjct: 313 RDLSQPADSL---ITKITRTMQIPLA------DVGEIIGVRGENVELIRSVSGAVVVLEK 363
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
RV+ + T H VQ A + G +G SG
Sbjct: 364 IGNGQEVRVMIEGTPSQVQTAHQLVQEA----------LSGDRGLPSG 401
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALIS-FAAPLTKSG-ERVVTISALEYLDTRH 333
R++ GIIG+RG ++ L + + A + AP R+V +SA E ++
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAEL 159
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS---ILVGADFVGCLTGSGSSAVSE 390
SP NAA+ +F E+E S G A +S +LV + G +
Sbjct: 160 SPAMNAAIKIFKHINEIEDIN--SDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKS 217
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
+++ TG+ ++++ +++L + +++I+G V NAL V+G LR L +L+
Sbjct: 218 IQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHL 277
Query: 451 ARPRSP 456
++P
Sbjct: 278 FERKNP 283
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 190/451 (42%), Gaps = 69/451 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ ++ HR +G+ ++ I
Sbjct: 31 LRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDI--------HRK---ENAGATEKAIT- 78
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+ S++E + + E+ + D + +LA+ + +G ++GK
Sbjct: 79 -----------IHSSKEGCSQACRMILEIMEKEANDTKIVEEVPLKILAHNSLVGRLIGK 127
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVK----KALVAVTTCLQHLS 202
GRN+ ++ ++G KI + +A+ D + T++V+ + A ++ L
Sbjct: 128 EGRNLKKIEQDTGTKITI------SALQDLTVYNQERTISVRGGVEECCKAEGEIMKKLR 181
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG------NPSDNASEFHSSSA 256
++ + + + F +S++PP +G P++ + S
Sbjct: 182 EAHENDVASVNQQTNMMAGLNLSALGIFSSGMSVLPPASGLRGSLSTPANYSPLLGPSIM 241
Query: 257 DADRDHP-----GLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFA 310
P L + G +QEV LF A G +IGK+G ++ L + +GA I A
Sbjct: 242 GGLYGVPSSGALSLQQAGGEQEVVY--LFIPTPAVGALIGKKGQHIKELAHFAGASIKIA 299
Query: 311 APLT-KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
AP + ER+V I+ + A ++ + E + F++ E +
Sbjct: 300 APESPDEPERMVIITGPPEAQFK------AQGRIYGKLKE---ENFFTAKEE--VKLEAH 348
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +DV ++I G + +
Sbjct: 349 IKVPSTAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENDDVFVKIIGHFFASQT 405
Query: 427 VQNALSEVVGRLRHNLKSGEILNEARPRSPS 457
Q + E+V +K E ++ P++PS
Sbjct: 406 AQRKIREIV----QQVKQQERKHQQMPQTPS 432
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML IIG++G ++ L + A I + ER V +SA E
Sbjct: 35 GWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEE 94
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D +P + + V ++VE ++G V+ +LV A G L G + +
Sbjct: 95 PDAPIAPAIDGLLRVHKCIMDVESDVPSAAGV----MVSTRLLVVAAQAGSLIGKQGATI 150
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ + ++++ GE + A QND V++I GE +V A+ + LR L
Sbjct: 151 KSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFL 203
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +TK RI G PG+ R ++V D
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPD----- 96
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
++ + ++RV + + +VE++V G V+ LL + G ++GK
Sbjct: 97 ---------APIAPAIDGLLRVHKCIMDVESDVPS-AAGVMVS-TRLLVVAAQAGSLIGK 145
Query: 147 GGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
G + ++ S + +L P A +D +++I G +V KA+ + + L+
Sbjct: 146 QGATIKSIQEASNCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKF--- 202
Query: 205 EKSPICFNRPIEKVFYSNSSDPHRE 229
+R + KVF P+ +
Sbjct: 203 -----LVDRSVIKVFEMEMQKPNTQ 222
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 44/267 (16%)
Query: 3 HHSNPYGYSS---KRRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSI 46
H+ P+ S R+ PL P + S +++ P+ G +IG+ G
Sbjct: 19 HNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQT 78
Query: 47 ISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQE 103
I ++++T I +PG+ RV L+ G+ + + V E + + E
Sbjct: 79 IVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTE 138
Query: 104 AVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV 163
V + + V + D V L+ + G+++GKGG V + +SGA +
Sbjct: 139 PV-SILQPQTTV--------NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 189
Query: 164 MLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNS 223
+ P + ++++ I+G +K AV +Q + +S C N + YSN
Sbjct: 190 LSQKPDGINLQERVVTISGEPEQNRK---AVEIIVQKIQEDPQSSSCLN-----ISYSNI 241
Query: 224 SDPHREFFPHLSLVPPLTGNPSDNASE 250
S P P TG+P N++E
Sbjct: 242 SGPVANSNP--------TGSPYANSAE 260
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 99/245 (40%), Gaps = 41/245 (16%)
Query: 11 SSKRRGPLNLPDDVVS--------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKC 56
S R+ PL P + S +++ P+ G +IG+ G I ++R+T
Sbjct: 6 SDSRKRPLETPTEATSTKRSNTAGEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGA 65
Query: 57 RIHCEGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSS--TQEAVIRVFER 111
I +PG+ RV LV GS ++ N + + EV T+ + +
Sbjct: 66 TIKLSKSKDFYPGTTERVCLVQGSA---ESLLSVHNFIAEKVREVPQGGTKNDLGVLLPP 122
Query: 112 MWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACA 171
+ AE L+ T G+++GKGG V + ESGA + + PA
Sbjct: 123 QTTINAE--------RAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQKPAGP 174
Query: 172 AIDDQLIQITGATLAVKKALVAV-----------TTCLQHLSTMEKSPICFNRPIEKVFY 220
+ ++++ ++G V+KA+ ++ TT L T + P+ + P +
Sbjct: 175 NLHERVVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLNISYTNSQGPVANSNPTGSPYA 234
Query: 221 SNSSD 225
S++
Sbjct: 235 GGSAE 239
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FP 65
G ++K+ + D++V +++ P+ VG LIG+ G + +++ ++ CR+ +P
Sbjct: 18 GPATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYP 77
Query: 66 GSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFE-RMWEVEAEVEGDGD 124
G++ R+ LV G + ++ +DV++E +F+ + E + E++
Sbjct: 78 GTNERICLVKGKIASVLKV----SDVILEKIREKVDNNTPSDIFDHKGMERKNEMK---- 129
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
L+ T G+V+GK G + +R ++GA I + P
Sbjct: 130 --------LVVPNTSAGMVIGKSGARIKEIREQTGANIQVYP 163
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 185/446 (41%), Gaps = 81/446 (18%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
GY S R + P R++ PT VG +IG+ G+ I + + T+ ++
Sbjct: 188 GYGSPRPRQHDFP-----LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-------- 234
Query: 69 HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDD 127
HR +G+ ++ I + ST E + ++ + E +D
Sbjct: 235 HRK---ENAGAAEKPIT------------IHSTPEGCSAACRMILDIMQKEANETKTTED 279
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
+ +LA+ + +G ++GK GRN+ ++ ++G KI + +++ D I T+ V
Sbjct: 280 IP-LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITI------SSLQDLTIYNPERTITV 332
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLT 241
K ++ A C + +K + I + + P F L ++PP
Sbjct: 333 KGSIDAC--CKAEVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAA 390
Query: 242 GNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQ 300
G S + A A + P +QEV LF A G +IGK+G ++ L
Sbjct: 391 GPRS-------AVPAVAPQQAP-------EQEVV--YLFIPTQAVGALIGKKGQHIKQLA 434
Query: 301 NASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
+ +GA I A A ER+V I+ + A +F + E + FS+
Sbjct: 435 HFAGASIKIAPAESPDVTERMVIITGTPEAQFK------AQGRIFGKLKE---ENFFSAK 485
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVI 418
E + I V + G + G G V+E++++T ++ +V +Q +ND V +
Sbjct: 486 EEV--KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ---TPDENDEVFV 539
Query: 419 QISGEY---KNVQNALSEVVGRLRHN 441
+ISG + + Q + E++ +++
Sbjct: 540 KISGHFFASQTAQRKIREIIQQVKQQ 565
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 172/413 (41%), Gaps = 55/413 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ R++ PT VG +IG+ G+ I +I + T +I HR +G+ ++ I
Sbjct: 195 IPLRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDI--------HRK---ENAGAAEKPI 243
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ ST E + + E+ + D + +LA+ +G ++
Sbjct: 244 T------------IHSTPEGCSKACTTIMEIMQKEALDTKFTEEIPLKILAHNNFVGRLI 291
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++G KI + P + D + T+ VK ++ A + + + M
Sbjct: 292 GKEGRNLKKIEQDTGTKITISP------LQDLTLYNPERTITVKGSIEACSRAEEEV--M 343
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + ++ P L L P T + S F S A H G
Sbjct: 344 KKVREAYESDMAAMNLQSNLIPGLNLNA-LGLFPSGTPGMGPSMSNFPPSGA-----HGG 397
Query: 265 LDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFA-APLTKSGERVVT 322
G + E LF A G IIGK+G ++ L + +GA I A A + +R+V
Sbjct: 398 CSSFGGQPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVI 457
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I + A +F + E + F G + + I V + G + G
Sbjct: 458 IVGPPEAQFK------AQCRIFGKLKE----ENF-FGPKEEVKLEAHIKVPSFAAGRVIG 506
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEYKNVQNALSEV 434
G V+E++++T ++ +V +Q +ND V+++ISG + Q A ++
Sbjct: 507 KGGKTVNELQNLTCAEV-VVPRDQT---PDENDQVIVKISGHFFACQLAQRKI 555
>gi|328702094|ref|XP_003241800.1| PREDICTED: hypothetical protein LOC100161431 isoform 2
[Acyrthosiphon pisum]
gi|328702096|ref|XP_001944651.2| PREDICTED: hypothetical protein LOC100161431 isoform 1
[Acyrthosiphon pisum]
Length = 657
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 100/239 (41%), Gaps = 35/239 (14%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D + +++ P G +IG+ G I+ ++ +T +I +PG+ RV ++ GS
Sbjct: 193 DGMYHMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISGSS 252
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-----EAEVEGDGDGDDVAYCGL 133
S IM A+ + ER+ E + GD D +
Sbjct: 253 S--EHIM-----------------AALTFIMERIREKPDASNRVQNSGDAIADREKQVKI 293
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
L + G+++GK G + +++ +SG + + + ++ I ++G T KK
Sbjct: 294 LIPNSTAGMIIGKAGAYIKQLKEDSGCFVQISQKAKDTTLQERCITVSGNTEGNKK---- 349
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
CL L+ + + P+ + P + Y++ + P F P S T N S+N + ++
Sbjct: 350 --VCLCILNKIIEDPLSASCP--NLSYADVNGPVANFNPTGSPYALATTNCSNNQTSYN 404
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 7/186 (3%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALIS-FAAPLTKSG-ERVVTISALEYLDTRH 333
R++ GIIG+RG ++ L + + A + AP R+V +SA E ++
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAEL 159
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS---ILVGADFVGCLTGSGSSAVSE 390
SP NAA+ +F E+E S G A +S +LV + G +
Sbjct: 160 SPAMNAAIKIFKHINEIEDIN--SDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKS 217
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
+++ TG+ ++++ +++L + +++I+G V NAL V+G LR L +L+
Sbjct: 218 IQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHL 277
Query: 451 ARPRSP 456
++P
Sbjct: 278 FERKNP 283
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 32/188 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI------HCEGGFPGSDHRVILVVGSGSI 80
FRLV P VGG+IGR G I + +T+ R+ H +G F R++LV +
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAF----SRIVLVSAREEV 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD----GDDVAYCGLLAN 136
+ E+S A I++F+ + E+E ++ DG +++ LL
Sbjct: 156 E--------------AELSPAMNAAIKIFKHINEIE-DINSDGTLMAPAPEISSVRLLVP 200
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAA---IDDQLIQITGATLAVKKALVA 193
+ V+GK G + ++ +G+ + ++ + + +++++I GA+L V AL
Sbjct: 201 FAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKL 260
Query: 194 VTTCLQHL 201
V L+
Sbjct: 261 VLGLLRKF 268
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 143/338 (42%), Gaps = 68/338 (20%)
Query: 17 PLNLPDDV----VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVI 72
PL +D ++ R + + G +IG++G ++ +R +T + PG RV+
Sbjct: 33 PLKTEEDYAVAELTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVL 92
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGD---GDGDD 127
V G +R R + + A+ +EG G G
Sbjct: 93 TVTGQ----------------------------LRSLARAYAIVAKGLLEGAPQMGMGGI 124
Query: 128 VAYCG-----LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLI 178
V+ G LL + ++G ++G+ G + ++ SG ++V MLP ++++
Sbjct: 125 VSNNGTHPIRLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIV 179
Query: 179 QITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYS----NSSDPHREFFPHL 234
++ G ++KA+ + CL + +N + NS+ P + +
Sbjct: 180 EVQGTPEGIEKAIWEIGKCLLDDWQRGTGTVLYNPAVRASLSGSQPLNSNPPAGNGYQNN 239
Query: 235 --SLVPPLTGNPSD--NASEFHSSSADA-DRDHPGLDKKGRK---QEVALRMLFSGWTAS 286
S TGN +D + S S++DA +R +P + + G + Q +++ G
Sbjct: 240 ANSRQYNRTGNGADFSDGSYNRRSNSDAGNRGYPQVTEDGEEIQTQNISIPADMVGC--- 296
Query: 287 GIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
IIG+ G + ++ +SGA IS A AP ++GER+ TI
Sbjct: 297 -IIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTI 333
>gi|195572282|ref|XP_002104125.1| GD18616 [Drosophila simulans]
gi|194200052|gb|EDX13628.1| GD18616 [Drosophila simulans]
Length = 330
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+S+++DT R+ +PG+ RV L+ GS
Sbjct: 78 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 137
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E ++++ ++ +VE++ + D +L +
Sbjct: 138 EAIMVVMEFIMDKIREKPDLTN----------KIVDVESKQTQERDKQ----VKILVPNS 183
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG 182
G+++GKGG + +++ ESG+ + + P ++ ++ I I G
Sbjct: 184 TAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCITIIG 227
>gi|332222252|ref|XP_003260281.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Nomascus leucogenys]
Length = 645
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 24/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ + ++ GDG A+ ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKKEDPDSGFH-HGDGPGNAFQEIMIPASKA 198
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 199 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 248
>gi|365982663|ref|XP_003668165.1| hypothetical protein NDAI_0A07680 [Naumovozyma dairenensis CBS 421]
gi|343766931|emb|CCD22922.1| hypothetical protein NDAI_0A07680 [Naumovozyma dairenensis CBS 421]
Length = 394
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 126/310 (40%), Gaps = 53/310 (17%)
Query: 141 GVVVGKGGRNVTRMRIESGAKIVM-LPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
++GK G + R+R ++ KI + P C D+++Q G+ V KA+V CL
Sbjct: 82 AALIGKKGATIKRIREDNDVKIAINASSPLCT---DRILQCNGSIENVSKAIV---DCL- 134
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADAD 259
KV N + P + F S + L P+ S+F + D D
Sbjct: 135 -----------------KVIKENVNKPTKPF--SFSFLNSLMSKPT--TSDFKNVKTDED 173
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL-QNASGALISFAAPLTKSGE 318
++ ++R++ S +IGK G I++ L ++ +++ L S E
Sbjct: 174 LENVQ----------SIRLILSTSMIGAVIGKNGNIIKKLMEDHDVRIVASKRQLPDSFE 223
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAV---------S 369
R++ I L V + VL R ++ +G++ + K S
Sbjct: 224 RILEIQGLANEIAECLTVVSHIVLA-NRVIDPKGERRYVPHAEKHARNNNNTNTKKYTGS 282
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY-KNVQ 428
++V +VG L G S ++ + T T+I +V + +N I G+Y KNV+
Sbjct: 283 VVVPEKYVGTLIGVKGSRINNLRSFTNTEINIVNFKD--EATNENKSRFTIVGKYEKNVK 340
Query: 429 NALSEVVGRL 438
A S ++ L
Sbjct: 341 TAESMLIRNL 350
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 83
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 84 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 134
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 191
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 192 AVSAIVQKVQEDPQSSSCLN 211
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E RML IIG++G ++ L + A I + ER V +SA E
Sbjct: 35 GWPGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEE 94
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D +P + + V ++VE ++G V+ +LV A G L G + +
Sbjct: 95 PDAPIAPAIDGLLRVHKCIMDVESDVPSAAGV----MVSTRLLVVAAQAGSLIGKQGATI 150
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+++ + ++++ GE + A QND V++I GE +V A+ + LR L
Sbjct: 151 KSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFL 203
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +TK RI G PG+ R ++V D I
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPI-- 99
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+ + ++RV + + +VE++V + LL + G ++GK
Sbjct: 100 ------------APAIDGLLRVHKCIMDVESDV--PSAAGVMVSTRLLVVAAQAGSLIGK 145
Query: 147 GGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
G + ++ S + +L P A +D +++I G +V KA+ + + L+
Sbjct: 146 QGATIKSIQEASNCIVRVLGENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKF--- 202
Query: 205 EKSPICFNRPIEKVFYSNSSDPHRE 229
+R + KVF P+ +
Sbjct: 203 -----LVDRSVIKVFEMEMQKPNTQ 222
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTIS- 324
G + E L++L + A IIGK G + LQ +GA I + + ERV +
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 87
Query: 325 ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVSILVG 373
E L+ HS A V E Q + E N A ++V
Sbjct: 88 TAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVP 138
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
G + G G + V + + +G ++L ++ G Q VV +SGE + V A+S
Sbjct: 139 NSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSA 195
Query: 434 VVGRLRHNLKSGEILN 449
+V +++ + +S LN
Sbjct: 196 IVQKVQEDPQSSSCLN 211
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 15 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 74
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 75 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 131
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 132 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 185
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 186 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 226
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 34 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 89
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 90 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 140
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 141 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 197
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 198 AVSAIVQKVQEDPQSSSCLN 217
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 174/435 (40%), Gaps = 65/435 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 175
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 176 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 223
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V+ + A + M+K
Sbjct: 224 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVRGTIEACANA--EIEIMKK 275
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 276 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSG 335
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 336 YFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 395
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 396 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 444
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +V+++I G + +
Sbjct: 445 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 501
Query: 427 VQNALSEVVGRLRHN 441
Q + E+V +++
Sbjct: 502 AQRKVREIVQQVKQQ 516
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
H ++ D+ PG E R+L +IG++G ++ + S A I
Sbjct: 90 HDATVPDDKKWPGWPG-----ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLE 144
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR---SVEVEGQQGFSSGENKGDAVAV 368
ER V ISA + DT P + + V R +E E Q + N G
Sbjct: 145 GPPAVPERAVMISAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTG---PT 201
Query: 369 SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQ 428
+LV A G L G + + ++D + +++V E V A +D V++I GE +
Sbjct: 202 RLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSH 259
Query: 429 NALSEVVGRLRHNLKSGEIL 448
A+ + LR L +L
Sbjct: 260 KAVELIASHLRKFLVDRSVL 279
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ PT VG +IGR G I + +++ RI G P R +++ D
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDT---- 164
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG---LLANTTKIGVV 143
E+ + ++RV R+ + E E D G LL ++ G +
Sbjct: 165 ----------ELPPAVDGLLRVHRRITD-GLETETDQPQRATVNTGPTRLLVPASQAGSL 213
Query: 144 VGKGGRNVTRMRIESGAKIVM-----LPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+GK G T I+ +K V+ +PP A DD++++I G KA+ + + L
Sbjct: 214 IGKQG--ATIKSIQDASKCVLRIVENVPP--VALNDDRVVEIQGEPHDSHKAVELIASHL 269
Query: 199 QHL 201
+
Sbjct: 270 RKF 272
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 174/435 (40%), Gaps = 65/435 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 200 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 248
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 249 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 296
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V+ + A + M+K
Sbjct: 297 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVRGTIEACANA--EIEIMKK 348
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 349 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSG 408
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 409 YFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 468
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 469 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 517
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +V+++I G + +
Sbjct: 518 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 574
Query: 427 VQNALSEVVGRLRHN 441
Q + E+V +++
Sbjct: 575 AQRKIREIVQQVKQQ 589
>gi|70933846|ref|XP_738237.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514288|emb|CAH87175.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 262
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTI 323
K G Q ++ML + A IIGK G+I+ ++N +G + + + + +RV+ I
Sbjct: 12 KCGTSQLCFVKMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVI 71
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ +L R + + + ENK ++V V + G
Sbjct: 72 CGKQEEINNVI----IIILDKIRQISIPNNMHVNKNENKTQTYTCRVVVPKSAVSAIIGK 127
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLK 443
G + ++++ TGT I++ E L N+ +I I G + +V++ ++V+ ++ +
Sbjct: 128 GGHQIKQLQNNTGTKIQISNREDGL-----NERIISIVGSFDSVRDTTTKVIASIQTDPN 182
Query: 444 SGEILN 449
++LN
Sbjct: 183 LKDLLN 188
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRI 84
+++ V G +IG++GSIIS I T C + FP + RV+++ G
Sbjct: 22 KMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGK------- 74
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ + + ++ + V + + C ++ + + ++
Sbjct: 75 ---------QEEINNVIIIILDKIRQISIPNNMHVNKNENKTQTYTCRVVVPKSAVSAII 125
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
GKGG + +++ +G KI + +++++I I G+ +V+ V +Q
Sbjct: 126 GKGGHQIKQLQNNTGTKIQISNRE--DGLNERIISIVGSFDSVRDTTTKVIASIQ 178
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
H ++ D+ PG E R+L +IG++G ++ + S A I
Sbjct: 90 HDATVPDDKKWPGWPG-----ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLE 144
Query: 312 PLTKSGERVVTISALEYLDTRHSPVQNAAVLVFAR---SVEVEGQQGFSSGENKGDAVAV 368
ER V ISA + DT P + + V R +E E Q + N G
Sbjct: 145 GPPAVPERAVMISAKDEPDTELPPAVDGLLRVHRRITDGLETETDQPQRATVNTG---PT 201
Query: 369 SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQ 428
+LV A G L G + + ++D + +++V E V A +D V++I GE +
Sbjct: 202 RLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSH 259
Query: 429 NALSEVVGRLRHNLKSGEIL 448
A+ + LR L +L
Sbjct: 260 KAVELIASHLRKFLVDRSVL 279
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ PT VG +IGR G I + +++ RI G P R +++ D
Sbjct: 109 FRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDT---- 164
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG---LLANTTKIGVV 143
E+ + ++RV R+ + E E D G LL ++ G +
Sbjct: 165 ----------ELPPAVDGLLRVHRRITD-GLETETDQPQRATVNTGPTRLLVPASQAGSL 213
Query: 144 VGKGGRNVTRMRIESGAKIVM-----LPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+GK G T I+ +K V+ +PP A DD++++I G KA+ + + L
Sbjct: 214 IGKQG--ATIKSIQDASKCVLRIVENVPP--VALNDDRVVEIQGEPHDSHKAVELIASHL 269
Query: 199 QHL 201
+
Sbjct: 270 RKF 272
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 83
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 84 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 134
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 191
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 192 AVSAIVQKVQEDPQSSSCLN 211
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 83
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 84 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 134
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 191
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 192 AVSAIVQKVQEDPQSSSCLN 211
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 83
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 84 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 134
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 191
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 192 AVSAIVQKVQEDPQSSSCLN 211
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 9 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 68
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 69 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 126 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 179
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 180 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 220
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 28 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 83
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 84 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 134
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 135 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 191
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 192 AVSAIVQKVQEDPQSSSCLN 211
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 7 PYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG--- 63
P +S +R D + +++ P+ G +IG+ G I ++R+T I
Sbjct: 16 PTEATSTKRSNTAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDF 75
Query: 64 FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
+PG+ RV LV GS ++ N + + EV Q A + ++ +
Sbjct: 76 YPGTTERVCLVQGSA---EALLSVHNFIAEKVREVP--QGAPKNDLGVLLPPQSTI---- 126
Query: 124 DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGA 183
+ + L+ T G+++GKGG V + ESGA + + PA + + ++++ ++G
Sbjct: 127 NAERAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQKPAGSNLHERVVTVSGE 186
Query: 184 TLAVKKALVAV-----------TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
V+KA+ ++ TT L + P+ + P + +++P
Sbjct: 187 PSQVQKAIHSIIHKSREDPPQGTTHLNISYINTQGPVANSNPTGSPYAGGAAEP 240
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 4 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 63
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 64 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 120
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 121 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 174
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 175 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 215
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 23 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 78
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 79 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 129
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 130 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 186
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 187 AVSAIVQKVQEDPQSSSCLN 206
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 73 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 132
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + + +
Sbjct: 133 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM-- 189
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 190 ------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 243
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 244 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 284
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 92 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 147
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 148 LVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 198
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 199 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 255
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 256 AVSAIVQKVQEDPQSSSCLN 275
>gi|345327623|ref|XP_001506617.2| PREDICTED: far upstream element-binding protein 1-like
[Ornithorhynchus anatinus]
Length = 827
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 240 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 295
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 296 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNSVQE--IMIPASKA 337
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 338 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 387
>gi|395536741|ref|XP_003770370.1| PREDICTED: far upstream element-binding protein 1 [Sarcophilus
harrisii]
Length = 621
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 32 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDAFGTQLPPMHQQQRSVMTEEYKVPDGMVG 90
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 91 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 132
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 133 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 188
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 189 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 224
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FP 65
G ++K+ + D++V +++ P+ VG LIG+ G + +++ ++ CR+ +P
Sbjct: 40 GPATKKAHVSDTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYP 99
Query: 66 GSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFE-RMWEVEAEVEGDGD 124
G++ R+ LV G + ++ +DV++E +F+ + E + E++
Sbjct: 100 GTNERICLVKGKIASVLKV----SDVILEKIREKVDNNTPSDIFDHKGMERKNEMK---- 151
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
L+ T G+V+GK G + +R ++GA I + P
Sbjct: 152 --------LVVPNTSAGMVIGKSGARIKEIREQTGANIQVYP 185
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 44/267 (16%)
Query: 3 HHSNPYGYSS---KRRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSI 46
H+ P+ S R+ PL P + S +++ P+ G +IG+ G
Sbjct: 19 HNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQT 78
Query: 47 ISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQE 103
I ++++T I +PG+ RV L+ G+ + + V E + + E
Sbjct: 79 IVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSTQKTE 138
Query: 104 AVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV 163
V + + V + D V L+ + G+++GKGG V + +SGA +
Sbjct: 139 PV-SILQPQTTV--------NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 189
Query: 164 MLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNS 223
+ P + ++++ I+G +K AV +Q + +S C N + YSN
Sbjct: 190 LSQKPEGINLQERVVTISGEPEQNRK---AVEIIVQKIQEDPQSSSCLN-----ISYSNI 241
Query: 224 SDPHREFFPHLSLVPPLTGNPSDNASE 250
+ P P TG+P N++E
Sbjct: 242 TGPVANSNP--------TGSPYANSTE 260
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 99/240 (41%), Gaps = 40/240 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
+ F+++ P G +IG+ G I+ ++++ R+ +PG+ RV L+ GS
Sbjct: 35 NGTFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGS- 93
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA----YCGLL 134
VEG V E ++ + + A++ D D A +L
Sbjct: 94 --------------VEG--VLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKIL 137
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
+ G+++GKGG + +++ ESGA + + A+ ++ I + G KKA +
Sbjct: 138 VPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCITVIGEMDNNKKACQLI 197
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSS 254
L + +S C + V Y+ + P F P TG+P N S HS+
Sbjct: 198 ---LAKIVEDPQSGSCLH-----VSYAEVTGPVANFNP--------TGSPYANPSSVHST 241
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D++V +++ P+ VG LIG+ G + +++ ++ CR+ +PG++ R+ LV G
Sbjct: 31 DNMVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKI 90
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFE-RMWEVEAEVEGDGDGDDVAYCGLLANT 137
+ ++ +DV++E +F+ + E + E++ L+
Sbjct: 91 ASVLKV----SDVILEKIREKVDNNTPSDIFDHKGMERKNEMK------------LVVPN 134
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
T G+V+GK G + +R ++GA I + P
Sbjct: 135 TSAGMVIGKSGARIKEIREQTGANIQVYP 163
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IGR G I + +++ RI G PG R +++ D
Sbjct: 117 FRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPD----- 171
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG-DGDGDD-------VAYCGLLANTT 138
+ + ++RV +R+ +G DG+ D V LL +
Sbjct: 172 ---------APLPPAVDGLLRVHKRI------TDGLDGESDQPQRAAGTVGPTRLLVPAS 216
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTC 197
+ G ++GK G + ++ S + +L P A DD++++I G L V KA+ + +
Sbjct: 217 QAGSLIGKQGATIKSIQDASKCVLRILESVPPVALSDDRVVEIQGEPLDVHKAVELIASH 276
Query: 198 LQHL 201
L+
Sbjct: 277 LRKF 280
>gi|449508372|ref|XP_002188229.2| PREDICTED: far upstream element-binding protein 1 [Taeniopygia
guttata]
Length = 592
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 2 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMTEEYKVPDGMVG 60
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 61 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 102
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 103 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 158
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 159 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 194
>gi|55727889|emb|CAH90697.1| hypothetical protein [Pongo abelii]
Length = 297
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 53/217 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD------------------------DVVSFRLVCPTPVV 36
+SN YGY ++R PL + PD V++ P +V
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMV 112
Query: 37 GGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 GFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE-------------- 155
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + +
Sbjct: 156 ---SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQ 210
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 174/435 (40%), Gaps = 65/435 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 237
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 238 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 285
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V+ + A + M+K
Sbjct: 286 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVRGTIEACANA--EIEIMKK 337
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 338 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSG 397
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 398 YFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 457
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 458 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 506
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +V+++I G + +
Sbjct: 507 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 563
Query: 427 VQNALSEVVGRLRHN 441
Q + E+V +++
Sbjct: 564 AQRKIREIVQQVKQQ 578
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 171/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 181
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 182 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 229
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 230 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EVEIMKK 281
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP TG +P S
Sbjct: 282 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSG 341
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 342 YFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 401
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 402 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 450
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 451 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 507
Query: 430 ALSEV 434
A ++
Sbjct: 508 AQRKI 512
>gi|383422519|gb|AFH34473.1| far upstream element-binding protein 1 [Macaca mulatta]
Length = 643
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|308482640|ref|XP_003103523.1| hypothetical protein CRE_28671 [Caenorhabditis remanei]
gi|308259944|gb|EFP03897.1| hypothetical protein CRE_28671 [Caenorhabditis remanei]
Length = 349
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
+++S +++ P+ +G +IGR+G ++++R+D KC+I +PG+ R+ V G
Sbjct: 81 EILSIKMLIPSLAIGAIIGRNGQELNTLRKDHKCQIQISKDGDTYPGTTERICFVKG--- 137
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA-EVEGDGDGDDVAYCGLLANTT 138
R+ N +V + S QE + + +A ++E GD++ ++ T
Sbjct: 138 ---RL----NHIV---AVIESIQEKIRKKCPNQTGNDAFDLENTLRGDEIK---IVMPYT 184
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV-AVTTC 197
+V+GK N+ +R G +I + P A D L ++ AL+ AV
Sbjct: 185 SSRMVIGKSKANIKLIRKHFGCQIEIYPQDGSAEADTSLDRVVTVAHEESAALLRAVRRI 244
Query: 198 LQHL 201
L+H+
Sbjct: 245 LKHV 248
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 73/409 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 181
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 182 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 229
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 230 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EVEIMKK 281
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLD 266
F + V + H +F SL PP P + H S +
Sbjct: 282 LREAFENDMLAV------NTHSGYFS--SLYPPHQFGPFPH----HHSYPE--------- 320
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISA 325
QE+ + + IIGK+GA ++ L +GA I A A ER+V I+
Sbjct: 321 -----QEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 374
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ A +F + E + F+ E + I V + G + G G
Sbjct: 375 PPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAGRVIGKGG 423
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 424 KTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 469
>gi|387015918|gb|AFJ50078.1| Far upstream element-binding protein 1-like [Crotalus adamanteus]
Length = 682
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 119 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 174
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 175 ----------------SVQSAKRLLDQIVEKGRPTPGFHHGDGPGNAVQE--IMIPASKA 216
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 217 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 266
>gi|194382840|dbj|BAG64590.1| unnamed protein product [Homo sapiens]
Length = 629
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|327276689|ref|XP_003223100.1| PREDICTED: far upstream element-binding protein 1-like [Anolis
carolinensis]
Length = 660
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 19/167 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
V++ P +VG +IGR G IS I++++ C+I G R ++ G+
Sbjct: 98 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPERSCMLTGTPE---- 153
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
V S + + ++ E+ GDG G+ V ++ +K G+V
Sbjct: 154 -------------SVQSAKRLLDQIVEKGRPTPGFHHGDGPGNAVQE--IMIPASKAGLV 198
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 199 IGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 245
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
F+++ P G +IG+ G I+ ++++ R+ +PG+ RV L+ GS
Sbjct: 40 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGS------ 93
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA----YCGLLANTTK 139
VEG V E ++ + + A++ D D A +L +
Sbjct: 94 ---------VEG--VLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNST 142
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+++GKGG + +++ ESGA + + A+ ++ I + G KKA + L
Sbjct: 143 AGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCITVIGEMDNNKKACQLI---LA 199
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSS 254
+ +S C + V Y+ + P F P TG+P N S HS+
Sbjct: 200 KIVEDPQSGSCLH-----VSYAEVTGPVANFNP--------TGSPYANPSSVHST 241
>gi|84662730|ref|NP_476513.2| far upstream element-binding protein 1 [Mus musculus]
gi|74144333|dbj|BAE36030.1| unnamed protein product [Mus musculus]
Length = 642
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 50 NSNDYGYGGQKR-PLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKVPDGMVG 108
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 109 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 150
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 151 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 206
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 207 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 242
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 174/435 (40%), Gaps = 65/435 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 193 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 241
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 242 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 289
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V+ + A + M+K
Sbjct: 290 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVRGTIEACANA--EIEIMKK 341
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 342 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSG 401
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 402 YFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 461
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 462 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 510
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +V+++I G + +
Sbjct: 511 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 567
Query: 427 VQNALSEVVGRLRHN 441
Q + E+V +++
Sbjct: 568 AQRKIREIVQQVKQQ 582
>gi|354468080|ref|XP_003496495.1| PREDICTED: far upstream element-binding protein 1-like [Cricetulus
griseus]
Length = 649
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 106 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 161
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 162 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 203
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 204 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 253
>gi|359319788|ref|XP_003639165.1| PREDICTED: far upstream element-binding protein 1-like [Canis lupus
familiaris]
Length = 663
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|83320094|ref|NP_001032742.1| far upstream element-binding protein 1 [Rattus norvegicus]
gi|123780056|sp|Q32PX7.1|FUBP1_RAT RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|79160170|gb|AAI07943.1| Far upstream element (FUSE) binding protein 1 [Rattus norvegicus]
Length = 639
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 50 NSNDYGYGGQKR-PLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKVPDGMVG 108
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 109 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 150
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 151 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 206
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 207 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 242
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 104/256 (40%), Gaps = 41/256 (16%)
Query: 11 SSKRRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
S R+ PL P + S +++ P+ G +IG+ G I ++++T
Sbjct: 30 SDSRKRPLETPTEASSTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGAT 89
Query: 58 IHCEGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE 114
I +PG+ RV L+ G+ + + V E + S E V + +
Sbjct: 90 IKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSSQKTEPV-SILQPQTT 148
Query: 115 VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID 174
V + D + L+ + G+++GKGG V + +SGA + + P +
Sbjct: 149 V--------NPDRIKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ 200
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL 234
++++ ++G +K AV +Q + +S C N + YSN + P P
Sbjct: 201 ERVVTVSGEPEQNRK---AVEIIVQKIQEDPQSSSCLN-----ISYSNITGPVANSNP-- 250
Query: 235 SLVPPLTGNPSDNASE 250
TG+P N++E
Sbjct: 251 ------TGSPFANSTE 260
>gi|149026247|gb|EDL82490.1| far upstream element (FUSE) binding protein 1, isoform CRA_b
[Rattus norvegicus]
gi|149026248|gb|EDL82491.1| far upstream element (FUSE) binding protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 395
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 50 NSNDYGYGGQKR-PLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKVPDGMVG 108
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 109 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 150
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 151 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 206
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 207 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 242
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 174/435 (40%), Gaps = 65/435 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 140 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 188
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 189 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 236
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V+ + A + M+K
Sbjct: 237 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVRGTIEACANA--EIEIMKK 288
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 289 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSG 348
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 349 YFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 408
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 409 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 457
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +V+++I G + +
Sbjct: 458 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 514
Query: 427 VQNALSEVVGRLRHN 441
Q + E+V +++
Sbjct: 515 AQRKIREIVQQVKQQ 529
>gi|426215780|ref|XP_004002147.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Ovis
aries]
Length = 655
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|74198585|dbj|BAE39771.1| unnamed protein product [Mus musculus]
Length = 654
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 96 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 151
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 152 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 193
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 194 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 243
>gi|410033139|ref|XP_003949493.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|426330100|ref|XP_004026062.1| PREDICTED: far upstream element-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 655
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|355689343|gb|AER98802.1| far upstream element binding protein 1 [Mustela putorius furo]
Length = 593
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|410967578|ref|XP_003990295.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Felis
catus]
Length = 655
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 184/443 (41%), Gaps = 77/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S+ ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 245 SASKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 291
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 292 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 336
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ +K
Sbjct: 337 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITIKG- 389
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 390 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 442
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ + + +P +++ + V L + IIGK+G ++ L +GA
Sbjct: 443 PTSGPPSAMTP----PYPQFEQQSETETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGA 496
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 497 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 544
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 545 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQT---PDENDQVVVKIT 599
Query: 422 GEYKNVQNA---LSEVVGRLRHN 441
G + Q A + E++ +++ +
Sbjct: 600 GHFYACQVAQRKIQEILTQVKQH 622
>gi|119626763|gb|EAX06358.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Homo
sapiens]
Length = 656
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|297278996|ref|XP_001103908.2| PREDICTED: far upstream element-binding protein 1 [Macaca mulatta]
gi|402855025|ref|XP_003892147.1| PREDICTED: far upstream element-binding protein 1 [Papio anubis]
gi|16878077|gb|AAH17247.1| FUBP1 protein [Homo sapiens]
gi|123998487|gb|ABM86845.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
gi|157929090|gb|ABW03830.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
Length = 653
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|119626762|gb|EAX06357.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 654
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|40225729|gb|AAH10083.1| FUBP1 protein [Homo sapiens]
Length = 304
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 53/217 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD------------------------DVVSFRLVCPTPVV 36
+SN YGY ++R PL + PD V++ P +V
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMV 112
Query: 37 GGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 GFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE-------------- 155
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + +
Sbjct: 156 ---SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQ 210
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|338725292|ref|XP_001496721.3| PREDICTED: far upstream element-binding protein 1 [Equus caballus]
Length = 644
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|417403610|gb|JAA48604.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 647
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|348586742|ref|XP_003479127.1| PREDICTED: far upstream element-binding protein 1-like [Cavia
porcellus]
Length = 643
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGSQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 86/187 (45%), Gaps = 17/187 (9%)
Query: 268 KGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTIS 324
K Q ++ML + A +IGK G+I+ S++N +G + + + + ERV+ +
Sbjct: 12 KATSQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLC 71
Query: 325 ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA--VAVSILVGADFVGCLTG 382
+ + NA +++ + ++ Q F +N + I+V V + G
Sbjct: 72 G------KQEQINNALLIILDKIRQITT-QNFQDKQNMNTSPKYTCRIVVPKSAVSAIIG 124
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G + +++D TG I++ E L N+ +I I G ++++ + +V ++++
Sbjct: 125 KGGQQIKQLQDTTGAKIQISSREDGL-----NERIISIIGPFESISDTAIKVTNSIQNDP 179
Query: 443 KSGEILN 449
++LN
Sbjct: 180 NLKDLLN 186
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH---CEGGFPGSDHRVILVVGSGSIDRRI 84
+++ V G +IG++GSII+SI T C + FP + RV++
Sbjct: 21 KMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLV----------- 69
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA---YCGLLANTTKIG 141
C G+ A++ + +++ ++ + D + + C ++ + +
Sbjct: 70 -LC--------GKQEQINNALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVS 120
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
++GKGG+ + +++ +GAKI + +++++I I G ++ + VT +Q+
Sbjct: 121 AIIGKGGQQIKQLQDTTGAKIQISSRE--DGLNERIISIIGPFESISDTAIKVTNSIQN 177
>gi|37078458|sp|Q91WJ8.1|FUBP1_MOUSE RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|15928578|gb|AAH14763.1| Fubp1 protein [Mus musculus]
gi|148679986|gb|EDL11933.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Mus
musculus]
Length = 651
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 96 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 151
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 152 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 193
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 194 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 243
>gi|17402900|ref|NP_003893.2| far upstream element-binding protein 1 [Homo sapiens]
gi|332809274|ref|XP_513511.3| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
troglodytes]
gi|397472594|ref|XP_003807825.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Pan
paniscus]
gi|426330096|ref|XP_004026060.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|116241370|sp|Q96AE4.3|FUBP1_HUMAN RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1; AltName: Full=DNA helicase
V; Short=hDH V
gi|17158056|gb|AAA17976.2|AAA17976 FUSE binding protein [Homo sapiens]
gi|119626761|gb|EAX06356.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Homo
sapiens]
gi|380817628|gb|AFE80688.1| far upstream element-binding protein 1 [Macaca mulatta]
gi|410225756|gb|JAA10097.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410258414|gb|JAA17174.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410301636|gb|JAA29418.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410331317|gb|JAA34605.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
Length = 644
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 168/409 (41%), Gaps = 73/409 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLD 266
F + +++ H +F SL PP P + H S +
Sbjct: 345 LREAFENDM------LAANTHSGYFS--SLCPPHQFGPFPH----HHSYPE--------- 383
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISA 325
QE+ + + IIGK+GA ++ L +GA I A A ER+V I+
Sbjct: 384 -----QEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 437
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ A +F + E + F+ E + I V + G + G G
Sbjct: 438 PPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAGRVIGKGG 486
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 487 KTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 532
>gi|291398647|ref|XP_002715950.1| PREDICTED: far upstream element-binding protein [Oryctolagus
cuniculus]
Length = 643
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|296489207|tpg|DAA31320.1| TPA: far upstream element-binding protein [Bos taurus]
Length = 610
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT-ISALEYLDTRHS 334
LR+L + A IIGK+G V+++Q A +S P +++ ERVV ++A+E
Sbjct: 42 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSV--PDSQTPERVVQLVAAVEN------ 93
Query: 335 PVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
V ++ AR EV Q S + +LV G + G G S + E+ +
Sbjct: 94 -VVKCVEMIIARIDEVHDNQDRDS--------ELKVLVHQSHAGAVIGRGGSRIKELREE 144
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRH 440
G D+K+ C + +IQI+G+ + + L ++ L+
Sbjct: 145 NGVDLKVYSE----CCPQSTERIIQINGKPEKIVACLVTIINTLKE 186
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 34/201 (16%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
L D RL+ + G +IG+ G + +I+ T+C + RV+ +V
Sbjct: 35 LADGKYELRLLVTSRGAGAIIGKKGESVKNIQ--TECDATVSVPDSQTPERVVQLV---- 88
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
+ E V++ E + EV + D D + +L + +
Sbjct: 89 --------------------AAVENVVKCVEMIIARIDEVHDNQDRD--SELKVLVHQSH 126
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G V+G+GG + +R E+G + + C +++IQI G + LV + L+
Sbjct: 127 AGAVIGRGGSRIKELREENGVDLKVY-SECCPQSTERIIQINGKPEKIVACLVTIINTLK 185
Query: 200 HLSTMEKSPICFNRPIEKVFY 220
+ K P +RP E +F+
Sbjct: 186 EIPI--KGP---SRPYESIFF 201
>gi|70949112|ref|XP_743997.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523758|emb|CAH77309.1| hypothetical protein PC000132.02.0 [Plasmodium chabaudi chabaudi]
Length = 234
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTI 323
K G Q ++ML + A IIGK G+I+ ++N +G + + + + +RV+ I
Sbjct: 12 KCGTSQLCFVKMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVI 71
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ +L R + + + ENK ++V V + G
Sbjct: 72 CGKQEEINNVI----IIILDKIRQISIPNNMHVNKNENKTQTYTCRVVVPKSAVSAIIGK 127
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLK 443
G + ++++ TGT I++ E L N+ +I I G + +V++ ++V+ ++ +
Sbjct: 128 GGHQIKQLQNNTGTKIQISNREDGL-----NERIISIVGSFDSVRDTTTKVIASIQTDPN 182
Query: 444 SGEILN 449
++LN
Sbjct: 183 LKDLLN 188
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/175 (18%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRI 84
+++ V G +IG++GSIIS I T C + FP + RV+++ G
Sbjct: 22 KMLINNLVAGSIIGKNGSIISGIENKTGCSLKLSPNNSYFPNTQKRVLVICGK------- 74
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ + + ++ + V + + C ++ + + ++
Sbjct: 75 ---------QEEINNVIIIILDKIRQISIPNNMHVNKNENKTQTYTCRVVVPKSAVSAII 125
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
GKGG + +++ +G KI + +++++I I G+ +V+ V +Q
Sbjct: 126 GKGGHQIKQLQNNTGTKIQISNRE--DGLNERIISIVGSFDSVRDTTTKVIASIQ 178
>gi|390466101|ref|XP_002751042.2| PREDICTED: far upstream element-binding protein 1 isoform 1
[Callithrix jacchus]
gi|395821882|ref|XP_003784259.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Otolemur garnettii]
gi|403257696|ref|XP_003921434.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410967576|ref|XP_003990294.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Felis
catus]
Length = 644
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|116003917|ref|NP_001070314.1| far upstream element-binding protein 1 [Bos taurus]
gi|115305288|gb|AAI23717.1| Far upstream element (FUSE) binding protein 1 [Bos taurus]
Length = 643
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 171/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 187
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 188 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 235
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 236 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EVEIMKK 287
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP TG +P S
Sbjct: 288 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSG 347
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 348 YFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 407
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 408 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 456
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 457 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 513
Query: 430 ALSEV 434
A ++
Sbjct: 514 AQRKI 518
>gi|311259162|ref|XP_003127965.1| PREDICTED: far upstream element-binding protein 1 [Sus scrofa]
gi|426215778|ref|XP_004002146.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Ovis
aries]
Length = 644
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 73/409 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLD 266
F + V + H +F SL PP P + H S +
Sbjct: 345 LREAFENDMLAV------NTHSGYFS--SLYPPHQFGPFPH----HHSYPE--------- 383
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISA 325
QE+ + + IIGK+GA ++ L +GA I A A ER+V I+
Sbjct: 384 -----QEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 437
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ A +F + E + F+ E + I V + G + G G
Sbjct: 438 PPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAGRVIGKGG 486
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 487 KTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 532
>gi|170592745|ref|XP_001901125.1| KH domain containing protein [Brugia malayi]
gi|158591192|gb|EDP29805.1| KH domain containing protein [Brugia malayi]
Length = 354
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT-ISALEYLDTRHS 334
LR+L + A IIGK+G V+++Q A +S P +++ ERVV ++A+E
Sbjct: 69 LRLLVTSRGAGAIIGKKGESVKNIQTECDATVSV--PDSQTPERVVQLVAAVEN------ 120
Query: 335 PVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDV 394
V ++ AR EV Q S + +LV G + G G S + E+ +
Sbjct: 121 -VVKCVEMIIARIDEVHDNQNRDS--------ELKVLVHQSHAGAVIGRGGSRIKELREE 171
Query: 395 TGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRH 440
G D+K+ C + +IQI+G+ + + L ++ L+
Sbjct: 172 NGVDLKVYSE----CCPQSTERIIQINGKPEKIVACLVTIINTLKE 213
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 34/201 (16%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
L D RL+ + G +IG+ G + +I+ T+C + RV+ +V +
Sbjct: 62 LADGKYELRLLVTSRGAGAIIGKKGESVKNIQ--TECDATVSVPDSQTPERVVQLVAA-- 117
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
V + + V + R+ EV D + +L + +
Sbjct: 118 ------------------VENVVKCVEMIIARIDEVHDNQNRDSE------LKVLVHQSH 153
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G V+G+GG + +R E+G + + C +++IQI G + LV + L+
Sbjct: 154 AGAVIGRGGSRIKELREENGVDLKVY-SECCPQSTERIIQINGKPEKIVACLVTIINTLK 212
Query: 200 HLSTMEKSPICFNRPIEKVFY 220
+ K P +RP E +F+
Sbjct: 213 EIPI--KGP---SRPYESIFF 228
>gi|301773894|ref|XP_002922363.1| PREDICTED: far upstream element-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 646
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|395730346|ref|XP_002810731.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Pongo abelii]
Length = 667
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 154
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 155 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 210
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 211 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 73/409 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 176
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 177 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 224
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 225 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EVEIMKK 276
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLD 266
F + V + H +F SL PP P + H S +
Sbjct: 277 LREAFENDMLAV------NTHSGYFS--SLYPPHQFGPFPH----HHSYPE--------- 315
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISA 325
QE+ + + IIGK+GA ++ L +GA I A A ER+V I+
Sbjct: 316 -----QEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 369
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ A +F + E + F+ E + I V + G + G G
Sbjct: 370 PPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAGRVIGKGG 418
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 419 KTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 464
>gi|417403606|gb|JAA48602.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 646
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|344278782|ref|XP_003411171.1| PREDICTED: far upstream element-binding protein 1 [Loxodonta
africana]
Length = 642
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 98 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 153
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 154 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 195
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 196 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 245
>gi|355558120|gb|EHH14900.1| hypothetical protein EGK_00902 [Macaca mulatta]
gi|355761156|gb|EHH61761.1| hypothetical protein EGM_19848 [Macaca fascicularis]
Length = 654
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 155
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 156 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 197
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 198 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 247
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 44/267 (16%)
Query: 3 HHSNPYGYSS---KRRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSI 46
H+ P+ S R+ PL P + S +++ P+ G +IG+ G
Sbjct: 19 HNQQPHMESDPPDSRKRPLETPTEASSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQT 78
Query: 47 ISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQE 103
I ++++T I +PG+ RV L+ G+ + + V E + + E
Sbjct: 79 IVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTE 138
Query: 104 AVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV 163
V + + V + D V L+ + G+++GKGG V + +SGA +
Sbjct: 139 PV-SILQPQTTV--------NPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQ 189
Query: 164 MLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNS 223
+ P + ++++ I+G +K AV +Q + +S C N + YSN
Sbjct: 190 LSQKPEGINLQERVVTISGEPEQNRK---AVEIIVQKIQEDPQSSSCLN-----ISYSNI 241
Query: 224 SDPHREFFPHLSLVPPLTGNPSDNASE 250
+ P P TG+P N++E
Sbjct: 242 TGPVANSNP--------TGSPYANSTE 260
>gi|440898065|gb|ELR49638.1| Far upstream element-binding protein 1 [Bos grunniens mutus]
Length = 675
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 131 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 186
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 187 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 228
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 229 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 278
>gi|281349073|gb|EFB24657.1| hypothetical protein PANDA_011323 [Ailuropoda melanoleuca]
Length = 568
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 12 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 67
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 68 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 109
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 110 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 159
>gi|390466103|ref|XP_003733520.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Callithrix jacchus]
gi|395821884|ref|XP_003784260.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Otolemur garnettii]
gi|403257698|ref|XP_003921435.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410967580|ref|XP_003990296.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Felis
catus]
Length = 665
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 121 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 176
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 177 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 218
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 219 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 268
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 73/409 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EVEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLD 266
F + V + H +F SL PP P + H S +
Sbjct: 345 LREAFENDMLAV------NTHSGYFS--SLYPPHQFGPFPH----HHSYPE--------- 383
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISA 325
QE+ + + IIGK+GA ++ L +GA I A A ER+V I+
Sbjct: 384 -----QEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITG 437
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGS 385
+ A +F + E + F+ E + I V + G + G G
Sbjct: 438 PPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAGRVIGKGG 486
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 487 KTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 532
>gi|426215782|ref|XP_004002148.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Ovis
aries]
Length = 665
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 121 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 176
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 177 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 218
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 219 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 268
>gi|417403740|gb|JAA48667.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 667
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 121 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 176
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 177 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 218
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 219 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 268
>gi|332809276|ref|XP_003308215.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|397472596|ref|XP_003807826.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
paniscus]
gi|426330098|ref|XP_004026061.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|194390162|dbj|BAG61843.1| unnamed protein product [Homo sapiens]
Length = 665
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 121 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 176
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 177 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 218
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 219 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 268
>gi|361123942|gb|EHK96076.1| putative RNA-binding protein rnc1 [Glarea lozoyensis 74030]
Length = 376
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 143/331 (43%), Gaps = 70/331 (21%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG+ G ++ +R +T C+ G RV+ + G
Sbjct: 52 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGCKAGVSKVVQGVHDRVLTIAG-------- 103
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD---GDGDDVAYCG-----LLAN 136
G E S A++ +A +EG G G VA G LL +
Sbjct: 104 ----------GCEAISKAYAIV--------AKALLEGAPQMGMGGVVAQSGSHPIKLLIS 145
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+
Sbjct: 146 HNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQKAVW 200
Query: 193 AVTTCL-----QHLSTMEKSPICFNRP----IEKVFYSNSSDPHREFFPHLSLVPPLTGN 243
+ CL + T+ +P+ +P + P ++ + + TGN
Sbjct: 201 EICKCLVDDWQRGTGTVLYNPVVRTQPGAAGGMGGGQALGGSPRGDYGNNRVM---RTGN 257
Query: 244 PSDNASE----FHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRG 293
+D ++E +++ +D+D R P D+ G + Q +++ G IIG+ G
Sbjct: 258 GADFSNEAPRSYNNRRSDSDAAQRGPPTHDENGEELQTQNISIPSDMVGC----IIGRAG 313
Query: 294 AIVRSLQNASGALISFA-APLTKSGERVVTI 323
+ + ++ SGA IS A +P ++GER+ TI
Sbjct: 314 SKISEIRKTSGARISIAKSPHDETGERMFTI 344
>gi|112180378|gb|AAH23780.1| Far upstream element (FUSE) binding protein 1 [Mus musculus]
gi|148679987|gb|EDL11934.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Mus
musculus]
Length = 640
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 53/217 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD------------------------DVVSFRLVCPTPVV 36
+SN YGY ++R PL + PD V++ P +V
Sbjct: 50 NSNDYGYGGQKR-PLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQSRSVMTEEYKVPDGMV 108
Query: 37 GGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 109 GFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE-------------- 151
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + +
Sbjct: 152 ---SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQ 206
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ +G K+VM+ D+ ++ITG V++A
Sbjct: 207 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 243
>gi|449275835|gb|EMC84592.1| Far upstream element-binding protein 1, partial [Columba livia]
Length = 611
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 61 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 116
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 117 ----------------SVQSAKRLLDQIVEKGRPTPGFHHGDGPGNAVQE--IMIPASKA 158
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 159 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 208
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 173/416 (41%), Gaps = 66/416 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 242
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 243 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 290
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 291 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 342
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG-NPSDNASEFHSSSADAD 259
F + V + P F LS++PP +G + A+ +H +
Sbjct: 343 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFA---- 398
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGE 318
+P +QE+ + + IIGK+GA ++ L +GA I A A E
Sbjct: 399 -QYP-------EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE 449
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVG 378
R+V I+ + A +F + E + F+ E + I V + G
Sbjct: 450 RMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAG 498
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
+ G G V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 499 RVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 551
>gi|148229383|ref|NP_001090529.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|25992563|gb|AAN77161.1| FUSE binding protein-like protein [Xenopus laevis]
Length = 610
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 33/184 (17%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
VV+ P +VG +IGR G IS I++++ C+I GG P
Sbjct: 88 VVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP--------------- 132
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVI---RVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
DR M G S QEA + ++ E+ G+G G+ V ++
Sbjct: 133 DRSCMLT--------GSPDSVQEAKMLLDQIVEKGRPTPGFHHGEGSGNAVQE--IMIPA 182
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA--LVAVT 195
+K G+V+GKGG + +++ +G K+VM+ D+ ++I G V++A +V
Sbjct: 183 SKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQAKEMVLEL 242
Query: 196 TCLQ 199
C Q
Sbjct: 243 ICDQ 246
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 193 RKRPLETPPEVVCTKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 252
Query: 61 EGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
+PG+ RV LV G+ + + V E + + T+ V+ + +
Sbjct: 253 SKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQ-AMTKPEVVNILQ------- 304
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+ + D L+ + G+++GKGG V + +SGA + + P + +++
Sbjct: 305 -PQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERV 363
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
+ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 364 VTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 404
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 9/187 (4%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTIS- 324
G + E L++L + A IIGK G + LQ +GA I + + ERV +
Sbjct: 212 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 271
Query: 325 ALEYLDTRHSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
E L+ HS + + EV + N A ++V G + G
Sbjct: 272 TAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIG 331
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G + V + + +G ++L ++ G Q VV +SGE + V A+S +V +++ +
Sbjct: 332 KGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQKVQEDP 388
Query: 443 KSGEILN 449
+S LN
Sbjct: 389 QSSSCLN 395
>gi|224161506|ref|XP_002338339.1| predicted protein [Populus trichocarpa]
gi|222871934|gb|EEF09065.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 420 ISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPALHKLHQSVALSPEFE 479
I+GE KNVQNAL +V +LR NL E+LN R SP R G + LHQS S +
Sbjct: 1 ITGEEKNVQNALFQVTCKLRGNLLPTEMLNGLRAGSPYRRAG--EITMLHQSAGESLDSN 58
Query: 480 QETIAVQGVDQ 490
QET + VDQ
Sbjct: 59 QETSFGKRVDQ 69
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 176 QLIQITGAT-LAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL 234
QL QITG++ +A+KKA++ VT+CLQ EK + + + P
Sbjct: 79 QLPQITGSSSVAIKKAVIDVTSCLQDCPPYEKDEVDLS-----LGAGRRRRSGSSGEPMC 133
Query: 235 SLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGA 294
SL+P +S + D DH K + +V RM+ S A IIG G+
Sbjct: 134 SLLPT------------YSENIATDGDH---KKPNEQSQVQFRMICSHGAAGSIIGTGGS 178
Query: 295 IVRSLQNAS 303
IVR+LQN +
Sbjct: 179 IVRALQNQT 187
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 23 DVVSF--------RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRV 71
D+V F +++ P+ G +IG+ G I ++++T I +PG+ RV
Sbjct: 68 DIVGFHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERV 127
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC 131
L+ G+ + + V E + + E V + + V + D V
Sbjct: 128 CLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPV-SILQPQTTV--------NPDRVKQA 178
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL 191
L+ + G+++GKGG V + +SGA + + P + ++++ I+G +K
Sbjct: 179 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTISGEPEQNRK-- 236
Query: 192 VAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
AV +Q + +S C N + YSN S P P TG+P N++E
Sbjct: 237 -AVEIIVQKIQEDPQSSSCLN-----ISYSNISGPVANSNP--------TGSPYANSAE 281
>gi|344237478|gb|EGV93581.1| Far upstream element-binding protein 1 [Cricetulus griseus]
Length = 449
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 75 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 130
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 131 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 172
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 173 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 222
>gi|351695694|gb|EHA98612.1| Far upstream element-binding protein 1 [Heterocephalus glaber]
Length = 359
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 54/227 (23%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 56 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGSQSPPMHQQQRSVMTEEYKAPDGMVG 114
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 115 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 156
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S ++ + ++ E+ + GDG G+ V ++ + K G+V+GKG + ++
Sbjct: 157 --SVQSAKQLLDQIVEKGRQAPGFHHGDGPGNAVQE--IMISVNKAGLVIGKGRETIKQL 212
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA--LVAVTTCLQ 199
+ +G K VM+ D+ ++ITG V++A +V C Q
Sbjct: 213 QERAGVKTVMIQDGPQNTGADKPLRITGEPYKVQQAKEMVLELICDQ 259
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 175
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E E ++V +LA+ +G ++GK
Sbjct: 176 ---HATPEG-----TSEACRMILEIM---QKEAEDTKLAEEVP-LKILAHNGLVGRLIGK 223
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 224 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTIDACANA--EMEIMKK 275
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P + S
Sbjct: 276 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSVPYHPFASHSG 335
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 336 YFPNMYPHHHFGPFPHHHSYPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 395
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 396 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 444
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q A +V+++I G + Q
Sbjct: 445 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDENA--EVIVRIIGHFFASQT 501
Query: 430 ALSEV 434
A ++
Sbjct: 502 AQRKI 506
>gi|147898765|ref|NP_001090218.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|47718038|gb|AAH70981.1| MGC78835 protein [Xenopus laevis]
gi|213626654|gb|AAI69815.1| Hypothetical protein MGC78835 [Xenopus laevis]
Length = 653
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 33/184 (17%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
VV+ P +VG +IGR G IS I++++ C+I GG P
Sbjct: 88 VVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP--------------- 132
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVI---RVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
DR M G S QEA + ++ E+ G+G G+ V ++
Sbjct: 133 DRSCMLT--------GSPDSVQEAKMLLDQIVEKGRPTPGFHHGEGSGNAVQE--IMIPA 182
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA--LVAVT 195
+K G+V+GKGG + +++ +G K+VM+ D+ ++I G V++A +V
Sbjct: 183 SKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQAKEMVLEL 242
Query: 196 TCLQ 199
C Q
Sbjct: 243 ICDQ 246
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV L+ G+
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 126
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + E V + + V + D V L+ + G++
Sbjct: 127 VHNFIAEKVREMPQSAQKPEPV-SILQPQTTV--------NPDRVKQAKLIVPNSTAGLI 177
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ I+G +K AV +Q +
Sbjct: 178 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK---AVEIIVQKIQE 234
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+S C N + YSN S P P TG+P N +E
Sbjct: 235 DPQSSSCLN-----ISYSNVSGPVANSNP--------TGSPYANTAE 268
>gi|74206095|dbj|BAE23532.1| unnamed protein product [Mus musculus]
Length = 700
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 96 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 151
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 152 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 193
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 194 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 243
>gi|26325406|dbj|BAC26457.1| unnamed protein product [Mus musculus]
Length = 306
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 116 VMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE- 171
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
V S + + ++ E+ GDG G+ V ++ +K
Sbjct: 172 ----------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKA 213
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
G+V+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 214 GLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 263
>gi|344231257|gb|EGV63139.1| hypothetical protein CANTEDRAFT_93908 [Candida tenuis ATCC 10573]
Length = 562
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 76/207 (36%), Gaps = 32/207 (15%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
VVSFR+ CP G ++G+ G I+ IR ++ G R++ V GS
Sbjct: 140 VVSFRMYCPVKEAGLIVGKKGEQINHIRDRANVKVFVSDNIKGVPERIVTVRGSA----- 194
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVF---ERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
E V + F R E E E LL +
Sbjct: 195 -------------------ENVAKAFGLAVRAILDEPEDEASSINSSSYDLRLLIPHPLV 235
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVT-TCLQ 199
G ++GK G + S AK+ P + D+++ I G + A+ A+ V L+
Sbjct: 236 GYIIGKQGSKFREIEENSAAKLKAAETPLPYST-DRILLINGVSDAIHIAVYYVAQVVLE 294
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDP 226
H + K I F P Y +S+P
Sbjct: 295 HKDALSKQKIVFYNPAN---YQPNSNP 318
>gi|357602329|gb|EHJ63352.1| hypothetical protein KGM_14186 [Danaus plexippus]
Length = 546
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
F+++ P+ V G +IG+ G I+ +++DT R+ +PG+ R L+ GS
Sbjct: 68 FKVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGS------ 121
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
E +VV + +E V V+A++ D D +L + G++
Sbjct: 122 ---VEGIMVVLDFIMEKIKEKPELVKPFPEGVDAKMPQDRDKQ----VKILVPNSTAGMI 174
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +SG+ + + ++ ++ I + G KKA + + LQ +
Sbjct: 175 IGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCITVVGEKENNKKACLMI---LQKVVD 231
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFP 232
+S C N V Y++ + P + P
Sbjct: 232 DPQSGSCPN-----VSYADVAGPVANYNP 255
>gi|148679985|gb|EDL11932.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Mus
musculus]
Length = 426
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 52/216 (24%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 82 NSNDYGYGGQKR-PLEDGDQPDAKKVPPQNDSFGAQLPPMHQQQRSVMTEEYKVPDGMVG 140
Query: 38 GLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 141 FIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE--------------- 182
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + ++
Sbjct: 183 --SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQL 238
Query: 155 RIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ D+ ++ITG V++A
Sbjct: 239 QERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 274
>gi|347968782|ref|XP_312014.5| AGAP002896-PA [Anopheles gambiae str. PEST]
gi|333467844|gb|EAA08028.5| AGAP002896-PA [Anopheles gambiae str. PEST]
Length = 537
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 35/242 (14%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVG 76
L D F+ + P+ G +IG+ G I+S+++D R+ +PG+ R+ L+ G
Sbjct: 19 LRSDNYHFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTTERICLISG 78
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
+ ++ D + E +++ + + E +A+ + D +L
Sbjct: 79 TVEGILAVLDFITDKIREKPDIT----------KALTEADAKQAQERDKQ----VKILVP 124
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
T G+++GK G + +++ ESG+ + + P + ++ I I G + +A
Sbjct: 125 NTTAGMIIGKAGAYIKQIKEESGSYVQISQKPKDLTLQERCITIIGEK---ENNRIACKM 181
Query: 197 CLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP--SDNASEFHSS 254
L + S C N V Y++ + P F P TG+P + F SS
Sbjct: 182 ILAKIVEDPSSGTCLN-----VSYADINGPVANFNP--------TGSPFAASQNPNFSSS 228
Query: 255 SA 256
+A
Sbjct: 229 TA 230
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV L+ G+
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 67
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + E V + + V + D V L+ + G++
Sbjct: 68 VHNFIAEKVREMPQSAQKPEPV-SILQPQTTV--------NPDRVKQAKLIVPNSTAGLI 118
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ I+G +K AV +Q +
Sbjct: 119 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK---AVEIIVQKIQE 175
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+S C N + YSN S P P TG+P N +E
Sbjct: 176 DPQSSSCLN-----ISYSNVSGPVANSNP--------TGSPYANTAE 209
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 173/416 (41%), Gaps = 67/416 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 242
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 243 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 290
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 291 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 342
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG-NPSDNASEFHSSSADAD 259
F + V + P F LS++PP +G + A+ +H +
Sbjct: 343 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFA---- 398
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGE 318
+P +QE+ + + IIGK+GA ++ L +GA I A A E
Sbjct: 399 --YP-------EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSE 448
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVG 378
R+V I+ + A +F + E + F+ E + I V + G
Sbjct: 449 RMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAG 497
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
+ G G V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 498 RVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 550
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 100/232 (43%), Gaps = 39/232 (16%)
Query: 14 RRGPLNLPDDVVS-------------FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
R+ PL P +VV +++ P+ G +IG+ G I ++++T I
Sbjct: 94 RKRPLETPPEVVCTKRINTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 153
Query: 61 EGG---FPGSDHRVILVVGSG-SIDRRIMFCENDVVVEGGEV--SSTQEAVIRVFERMWE 114
+PG+ RV LV G+ +++ F V E+ + T+ V+ + +
Sbjct: 154 SKSKDFYPGTTERVCLVQGTAEALNAAHSFIAEKV----REIPQAMTKPEVVNILQPQTT 209
Query: 115 VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID 174
+ + D L+ + G+++GKGG V + +SGA + + P +
Sbjct: 210 M--------NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ 261
Query: 175 DQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP 226
++++ ++G V KA+ A+ +Q + +S C N + Y+N + P
Sbjct: 262 ERVVTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN-----ISYANVAGP 305
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 35/200 (17%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVV 321
G + E L++L + A IIGK G + LQ +GA I L+KS ERV
Sbjct: 113 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVC 168
Query: 322 TIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVS 369
+ E L+ HS A V E Q + E N A
Sbjct: 169 LVQGTAEALNAAHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAK 219
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
++V G + G G + V + + +G ++L ++ G Q VV +SGE + V
Sbjct: 220 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHK 276
Query: 430 ALSEVVGRLRHNLKSGEILN 449
A+S +V +++ + +S LN
Sbjct: 277 AVSAIVQKVQEDPQSSSCLN 296
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 172/410 (41%), Gaps = 93/410 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR V GS+++ I
Sbjct: 150 LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDV--------HRKDNV---GSLEKAITI 198
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
N E ++ EV + + + DV +LA+ IG ++GK
Sbjct: 199 YGNP------------ENCTNACRKILEVMQQEATNTNKSDV-ILKILAHNNLIGRIIGK 245
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTTCLQ 199
G + R+ E+ KI + ++I+D ++I + G+ + KA ++ L+
Sbjct: 246 EGNTIKRIMSETETKITV------SSINDINSFNYERIITVKGSIENMSKAEAQISAKLR 299
Query: 200 H-----LSTMEKSPICFN--RPIEKVFYSNSSDP-------HREFFPHL------SLVPP 239
L +M + F P+ + + + P +++F P S +PP
Sbjct: 300 QSFENDLQSMAPQTVMFPGLHPMAMMSATGITYPGRGGPTSYQQFAPAPYPPMYPSTIPP 359
Query: 240 LTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRS 298
+ NP+ +AD QE A LF +A G IIG +G+ +RS
Sbjct: 360 I--NPA--------LAADV-------------QETAF--LFIPNSAVGAIIGTKGSNIRS 394
Query: 299 LQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ----- 353
+ SGA + A+ T++ ++ V +A + + + + V + +G
Sbjct: 395 MIRFSGASVKVAS--TENEKQGVVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFDKL 452
Query: 354 --QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+GF N+ + V ILV + VG + G G S V E++ VTG+ IKL
Sbjct: 453 RDEGFVPN-NEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKL 501
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 292 RGAIVRSLQNASGALISFAAPLTKSGERVVTI-------SALEYLDTRHSPVQNAAVLVF 344
R I++ L+ + I +++ E VVTI +A + T SP Q+A +F
Sbjct: 6 RTEIIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDA---LF 62
Query: 345 ARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG 404
+V ++ S + V V +LV +D +GC+ G G + + +G I ++
Sbjct: 63 RVHDKVVSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKN 122
Query: 405 EQVLGCAAQNDVVIQISGE 423
+ +L CA D ++QISGE
Sbjct: 123 DHLLSCALSFDELVQISGE 141
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 46 IISSIRRDTKCRIHCEGGFPGSDHRVILVVG----SGSIDRRIMFCENDVVVEGGEVSST 101
II +R DTK +I + + V+ + + + D F VS T
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTF-----------VSPT 57
Query: 102 QEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAK 161
Q+A+ RV +++ + E + V LL + +IG V+GKGG+ + + ESGA+
Sbjct: 58 QDALFRVHDKVVSEKVHSEDFEEASQVT-VQLLVTSDQIGCVIGKGGQIIQNIYSESGAQ 116
Query: 162 IVMLPPP---ACAAIDDQLIQITG 182
I +L +CA D+L+QI+G
Sbjct: 117 IYILKNDHLLSCALSFDELVQISG 140
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 28/227 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV L+ G+
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNN 124
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + E V + + V + D V L+ + G++
Sbjct: 125 VHDFIAEKVREMPQSAQKTEPV-SILQPQTTV--------NPDRVKQAKLVVPNSTAGLI 175
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ I+G +K AV +Q +
Sbjct: 176 IGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTISGEPEQNRK---AVEIIVQKIQE 232
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+S C N + YSN S P P TG+P N++E
Sbjct: 233 DPQSSSCLN-----ISYSNISGPVANSNP--------TGSPYANSAE 266
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 169/403 (41%), Gaps = 85/403 (21%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR V GS+++ I
Sbjct: 150 LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDV--------HRKDNV---GSLEKAITI 198
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
N E ++ EV + + + DV +LA+ IG ++GK
Sbjct: 199 YGNP------------ENCTNACRKILEVMQQEATNTNKSDV-ILKILAHNNLIGRIIGK 245
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH-----L 201
G + R+ E+ KI + + +++I + G+ + KA ++ L+ L
Sbjct: 246 EGNTIKRIMSETETKITV-----SSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDL 300
Query: 202 STMEKSPICFN--RPIEKVFYSNSSDP-------HREFFPHL------SLVPPLTGNPSD 246
+M + F P+ + + + P +++F P S +PP+ NP+
Sbjct: 301 QSMAPQTVMFPGLHPMAMMSATGITYPGRGGPTSYQQFAPAPYPPMYPSTIPPI--NPA- 357
Query: 247 NASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGA 305
+AD QE A LF +A G IIG +G+ +RS+ SGA
Sbjct: 358 -------LAADV-------------QETAF--LFIPNSAVGAIIGTKGSNIRSMIRFSGA 395
Query: 306 LISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ-------QGFSS 358
+ A+ T++ ++ V +A + + + + V + +G +GF
Sbjct: 396 SVKVAS--TENEKQGVVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFDKLRDEGFVP 453
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
N+ + V ILV + VG + G G S V E++ VTG+ IKL
Sbjct: 454 N-NEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKL 495
>gi|357123010|ref|XP_003563206.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 311
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 60/298 (20%)
Query: 37 GGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IG++GSI+ S+ + RI+ + FPG+ RV+LV G +F
Sbjct: 39 GCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTSRVVLVSG--------LF------- 83
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
+ +A+ + ER+ +GD D A L+ + G ++GKGG +
Sbjct: 84 -----NQLMDAMELILERLV-----YQGDQVIDSKATIALVVPSVCCGALIGKGGATLKA 133
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH--LSTMEKSPICF 211
+ ++ A I + P + D+L+ ITG+ +A+ + + L L ++ + I F
Sbjct: 134 ITQKASAGIKISPQDNSYGLHDRLVTITGSLDNQLRAIFLILSKLLEDVLYSIPIARIVF 193
Query: 212 NR-PIEKVFYSN-SSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKG 269
+R P V Y N SD H + + P +P N + + + A AD +H G
Sbjct: 194 SRYPASPVEYENVGSDEHVGRYQNKPNTP--VRSPDKNDGQEYLTIAIAD-EHIG----- 245
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTIS 324
+IG+ G + + SGA I +A + + +R V IS
Sbjct: 246 -----------------AVIGRAGRSINEITQVSGACIRISAKGDFIADTCDREVVIS 286
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 29/197 (14%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA-----PLTKSGERVVTI 323
G+K+ V L S A IIGK G+IV+S+++ SGA I+ + P T S RVV +
Sbjct: 24 GKKKHVMF--LVSHMEAGCIIGKAGSIVKSMESQSGARINISRHDQLFPGTTS--RVVLV 79
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
S L + + +A L+ R V +G Q S ++++V + G L G
Sbjct: 80 SGL------FNQLMDAMELILERLV-YQGDQVIDS------KATIALVVPSVCCGALIGK 126
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA----LSEVVGRLR 439
G + + + IK+ + G +D ++ I+G N A LS+++ +
Sbjct: 127 GGATLKAITQKASAGIKISPQDNSYGL---HDRLVTITGSLDNQLRAIFLILSKLLEDVL 183
Query: 440 HNLKSGEILNEARPRSP 456
+++ I+ P SP
Sbjct: 184 YSIPIARIVFSRYPASP 200
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 179/436 (41%), Gaps = 70/436 (16%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I + ST E + + E+ + D + +
Sbjct: 234 KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALV 192
LA+ +G ++GK GRN+ ++ ++ KI + P + ++ I + G+ KA
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSVETCAKAEE 341
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
+ ++ + E N + N +D L L PP +G P
Sbjct: 342 EIMKKIRE--SYENDIASMNVQTHLIPGLNLND--------LGLFPPTSGMPP------- 384
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-- 310
+S P + + + + + + IIGK+G ++ L +GA I A
Sbjct: 385 PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA 444
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
AP K R+V I+ + A ++ + E + F S + + A
Sbjct: 445 EAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEEVKLEA-H 491
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---K 425
I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+G + +
Sbjct: 492 IRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKITGHFYACQ 547
Query: 426 NVQNALSEVVGRLRHN 441
Q + E++ +++ +
Sbjct: 548 VAQRKIQEILTQVKQH 563
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 16/215 (7%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT+S
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--CSCPERIVTVSG------SR 73
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
S + A L+ + E Q ++ + + ++V A G L G G S + E+ +
Sbjct: 74 SAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIRE 133
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARP 453
+TG I++ ++L + + V +SG + + + + + + G + P
Sbjct: 134 ITGCSIQV--ASEMLPNSTERAVT--LSGSAEAITQCIYHICCVMLESPPKGATI----P 185
Query: 454 RSPSGRVGGPALHKLHQSVALSPEFEQETIAVQGV 488
P +V GP + Q+ + + V G+
Sbjct: 186 YRPKPQVNGPVIVANGQAYTIQGNYAVPAQEVSGI 220
>gi|194377024|dbj|BAG63073.1| unnamed protein product [Homo sapiens]
Length = 642
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 46/213 (21%)
Query: 4 HSNPYGYSSKRRGPL---NLPD-----------------------DVVSFRLVCPTPVVG 37
+SN YGY ++R PL + PD V++ P +VG
Sbjct: 54 NSNDYGYGGQKR-PLEDGDQPDAKKVAPQNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVG 112
Query: 38 GLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGE 97
+IGR G IS I++++ C+I G R ++ G+
Sbjct: 113 FIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPE-----------------S 155
Query: 98 VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIE 157
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + +++
Sbjct: 156 VQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQLQER 213
Query: 158 SGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+G K+VM+ D+ ++ITG V++A
Sbjct: 214 AGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 246
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 172/410 (41%), Gaps = 93/410 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ + +VG +IGR GS I I + T+ R+ HR V GS+++ I
Sbjct: 150 LRILVHSDMVGAIIGRGGSTIRQITQQTRARVDV--------HRKDNV---GSLEKAITI 198
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
N E ++ EV + + + DV +LA+ IG ++GK
Sbjct: 199 YGNP------------ENCTNACRKILEVMQQEATNTNKSDV-ILKILAHNNLIGRIIGK 245
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDD-------QLIQITGATLAVKKALVAVTTCLQ 199
G + R+ E+ KI + ++I+D ++I + G+ + KA ++ L+
Sbjct: 246 EGNTIKRIMSETETKITV------SSINDINSFNYERIITVKGSIENMSKAEAQISAKLR 299
Query: 200 H-----LSTMEKSPICFN--RPIEKVFYSNSSDP-------HREFFPHL------SLVPP 239
L +M + F P+ + + + P +++F P S +PP
Sbjct: 300 QSFENDLQSMAPQTVMFPGLHPMAMMSATGITYPGRGGPTSYQQFAPAPYPPMYPSTIPP 359
Query: 240 LTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRS 298
+ NP+ +AD QE A LF +A G IIG +G+ +RS
Sbjct: 360 I--NPA--------LAADV-------------QETAF--LFIPNSAVGAIIGTKGSNIRS 394
Query: 299 LQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ----- 353
+ SGA + A+ T++ ++ V +A + + + + V + +G
Sbjct: 395 MIRFSGASVKVAS--TENEKQGVVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFDKL 452
Query: 354 --QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+GF N+ + V ILV + VG + G G S V E++ VTG+ IKL
Sbjct: 453 RDEGFVPN-NEEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIKL 501
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 169/427 (39%), Gaps = 62/427 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 199 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKPI 247
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ ST E + E+ + D D +LA+ +G ++
Sbjct: 248 ------------SIHSTPEGCSAACRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLI 295
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + P + D + T+ VK ++ A CL M
Sbjct: 296 GKEGRNLKKVEQDTDTKITISP------LQDLTLYNPERTITVKGSIEAC--CLAEQEIM 347
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSL--VPPLTGNPSDNASEFHSSSADADRDH 262
+K ++ I + + P L+L + + + +S
Sbjct: 348 KKVREAYDNDIA------AMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPG----- 396
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVV 321
P G ++ + + +IGK+G ++ L +GA I A A S R+V
Sbjct: 397 PPYGPMGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMV 456
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
++ + A ++ + E + F G + + I V A G +
Sbjct: 457 IVTGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIKVAAAAAGRVI 505
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KNVQNALSEVVGRL 438
G G V+E++++T ++ +V EQ + V+++I G + + Q + +++ ++
Sbjct: 506 GKGGKTVNELQNLTAAEV-VVPREQT--PDEHDQVIVKIIGHFYASQLAQRKIRDILTQV 562
Query: 439 RHNLKSG 445
+ K G
Sbjct: 563 KQQQKGG 569
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 180/443 (40%), Gaps = 80/443 (18%)
Query: 9 GYSSKRRGP----------LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI 58
G+SS+ +GP L+ P R++ PT VG +IG+ G I ++ + T+ ++
Sbjct: 172 GHSSREQGPSPGGSSQPKQLDFP-----LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKV 226
Query: 59 HCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE 118
HR +G+ ++ I EG EA + + M + E
Sbjct: 227 DI--------HRK---ENAGAAEKPITI---HATPEG-----CSEACRMILDIM---QKE 264
Query: 119 VEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLI 178
E +++ +LA+ + +G ++GK GRN+ ++ ++G KI + P + D I
Sbjct: 265 AEETKSAEEIP-LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISP------LQDLTI 317
Query: 179 QITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFP 232
T+ VK ++ A + + M K + I V + P F
Sbjct: 318 YNPERTITVKGSIEACSNAEAEI--MNKLREAYENDIVTVNQQANLIPGLNLNALGIFST 375
Query: 233 HLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKR 292
LS++P TG S ++ A + QEV + + IIGK+
Sbjct: 376 GLSMLPSGTGVRRPAVSTPYNPFAVPE------------QEV-VNLFIPTQAVGAIIGKK 422
Query: 293 GAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVE 351
G ++ L +GA I A A ++ ER+V I+ + A +F + E
Sbjct: 423 GQHIKQLARFAGASIKIAPAESPEASERMVIITGPPEAQFK------AQGRIFGKLKE-- 474
Query: 352 GQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA 411
+ F+ E + I V + G + G G V+E++++T ++ +V +Q
Sbjct: 475 -ENFFNPKEEV--KLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PD 528
Query: 412 AQNDVVIQISGEYKNVQNALSEV 434
+VV++I G + Q A ++
Sbjct: 529 ENEEVVVKIIGHFFASQTAQRKI 551
>gi|45190789|ref|NP_985043.1| AER186Cp [Ashbya gossypii ATCC 10895]
gi|74693470|sp|Q756R8.1|HEK2_ASHGO RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|44983831|gb|AAS52867.1| AER186Cp [Ashbya gossypii ATCC 10895]
gi|374108267|gb|AEY97174.1| FAER186Cp [Ashbya gossypii FDAG1]
Length = 316
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 143 VVGKGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++G+GG + +R +G KI + +C+ D+L+++TG+ AV +L V L
Sbjct: 47 ILGRGGNTIDNIRKANGVKIGISTKEKSCS---DRLLEVTGSIDAVANSLADVVKVLTAD 103
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV-PPLTGNPSDNASEFHSSSADADR 260
T E+ +P + F HL+ + PP PS + +E
Sbjct: 104 DTNEEDA--------------EPEPEQHIFKHLNFILPP----PSPDEAE---------- 135
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA-SGALISFAAPLTKSGER 319
D KQ LR++ + S IIG G+ ++ L + S L+ L S +R
Sbjct: 136 -----DPMKVKQIGNLRLIVTNSQVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDR 190
Query: 320 VVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF--SSGENKGDAVAVSILVGADFV 377
++ I + ++ + +++ + + V ++ + S +K V ++ + A++V
Sbjct: 191 ILEIQG--FPNSIANCIKDISQTLIKDDVLDTKEKRYYPHSKHSKDIHVTATVAIPAEYV 248
Query: 378 GCLTGSGSSAVSEMEDVTGTDI 399
G L G G + ++ + T T I
Sbjct: 249 GALLGHGGNRIANLRKYTRTKI 270
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 169/427 (39%), Gaps = 62/427 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 199 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKPI 247
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ ST E + E+ + D D +LA+ +G ++
Sbjct: 248 ------------SIHSTPEGCSAACRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLI 295
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + P + D + T+ VK ++ A CL M
Sbjct: 296 GKEGRNLKKVEQDTDTKITISP------LQDLTLYNPERTITVKGSIEAC--CLAEQEIM 347
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSL--VPPLTGNPSDNASEFHSSSADADRDH 262
+K ++ I + + P L+L + + + +S
Sbjct: 348 KKVREAYDNDIA------AMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVPG----- 396
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVV 321
P G ++ + + +IGK+G ++ L +GA I A A S R+V
Sbjct: 397 PPYGPMGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMV 456
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
++ + A ++ + E + F G + + I V A G +
Sbjct: 457 IVTGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIKVAAAAAGRVI 505
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KNVQNALSEVVGRL 438
G G V+E++++T ++ +V EQ + V+++I G + + Q + +++ ++
Sbjct: 506 GKGGKTVNELQNLTAAEV-VVPREQT--PDEHDQVIVKIIGHFYASQLAQRKIRDILTQV 562
Query: 439 RHNLKSG 445
+ K G
Sbjct: 563 KQQQKGG 569
>gi|147906092|ref|NP_001080641.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|28278093|gb|AAH44277.1| Fubp1 protein [Xenopus laevis]
Length = 653
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
V++ P +VG +IGR G IS I++D+ C+I I +G DR
Sbjct: 88 VLTEEYKVPDGMVGFIIGRGGEQISRIQQDSGCKIQ------------IAPDSAGMPDRS 135
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG--DGDGDDVAYCGLLANTTKIG 141
M G S Q A R+ +++ E G G+G A ++ +K G
Sbjct: 136 CMLT--------GSPDSVQ-AAKRLLDQIVEKGRPTPGFHHGEGSGNAVQEIMIPASKAG 186
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+V+GKGG + +++ +G K+VM+ D+ ++I G V++A
Sbjct: 187 LVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQA 235
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
+ +L+ ++ GCL G G + +SEM T +I+++ E + CA +D ++QI G+ +
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 426 NVQNALSEVVGRLR 439
+ AL +V RLR
Sbjct: 63 AARAALVQVTSRLR 76
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAIDDQLIQITGATLAVKK 189
LL + + G ++GKGG ++ MR ++ A I +LP P CA D+++QI G A +
Sbjct: 7 LLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIRAARA 66
Query: 190 ALVAVTTCLQ 199
ALV VT+ L+
Sbjct: 67 ALVQVTSRLR 76
>gi|170048061|ref|XP_001851517.1| nova [Culex quinquefasciatus]
gi|167870269|gb|EDS33652.1| nova [Culex quinquefasciatus]
Length = 534
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 43/243 (17%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D F+ + P+ G +IG+ G I+S+++D R+ +PG+ RV L+ SG+
Sbjct: 25 DNYHFKTLVPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLI--SGT 82
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
+D + D +++ IR M + E + + +L +
Sbjct: 83 VDGILTVL--DFIIDK----------IREKPDMTKALTEADAKQAAERDKQVKVLVPNST 130
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+++GK G + +++ +SG+ + + P + ++ I I G K A C
Sbjct: 131 AGMIIGKAGAFIKQIKEDSGSYVQISQKPKELTLQERCITIIGEKENNKIA------CKM 184
Query: 200 HLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP---SDNASEFHS 253
LS + + P C N V Y++ + P F P TG+P S N + F S
Sbjct: 185 ILSKIVEDPSSGSCLN-----VSYADINGPVANFNP--------TGSPFAASQNPT-FSS 230
Query: 254 SSA 256
S+A
Sbjct: 231 STA 233
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 137/381 (35%), Gaps = 123/381 (32%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
L+ ++G ++GK G N+ + R ESGAKI + + + ++++ +TG+T A+ KA
Sbjct: 78 LIMQGKEVGSIIGKKGDNIKKFREESGAKINI----SDGSCPERIVTVTGSTEAILKAFS 133
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
+ + + ++ P+ P + SN S HL
Sbjct: 134 LIARKFEEMLSLLCLPVQTVGPTLQELQSNGS--------HLP----------------- 168
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP 312
K V LR++ +IGK G+ ++ ++ +GA I A+
Sbjct: 169 ------------------KPPVTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASE 210
Query: 313 -LTKSGERVVTISALEYLDTR----------HSPVQNAAV----------LVFA--RSVE 349
L S ER VT+S T+ SP + A + ++FA ++
Sbjct: 211 MLPNSTERAVTVSGTAEAITKCIYQICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYT 270
Query: 350 VEGQQ----------------------GFSSGENKGDAVAV------------------- 368
V+GQ G S G A+A
Sbjct: 271 VQGQYAIPHPDLTKLHQLALQHAPLLPGHSVGAINPQALAALATTNNLRPNTAAAAIATA 330
Query: 369 -----SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG- 422
+ + D +GC+ G G S ++E+ ++G IK+ E+ D + ISG
Sbjct: 331 STTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE-----GSKDRTVTISGT 385
Query: 423 -EYKNVQNALSEVVGRLRHNL 442
E N+ L L NL
Sbjct: 386 PEAINLAQYLINTSMELHKNL 406
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 28/227 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV L+ G+
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 126
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + E V + + V + D V L+ + G++
Sbjct: 127 VHNFIAEKVREMPQSAQKPEPV-SILQPQTTV--------NPDRVKQAKLIVPNSTAGLI 177
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ I+G +K AV +Q +
Sbjct: 178 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK---AVEIIVQKIQE 234
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+S C N + YSN S P P TG+P N E
Sbjct: 235 DPQSSSCLN-----ISYSNVSGPVANSNP--------TGSPYANTGE 268
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 17/187 (9%)
Query: 268 KGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTIS 324
KG Q ++ML + A +IGK G+I+ S++N +G + + + + ERV+ +
Sbjct: 11 KGTNQLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLC 70
Query: 325 ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA--VAVSILVGADFVGCLTG 382
+ + NA +++ + ++ Q F +N I++ + G
Sbjct: 71 G------KQEQINNALLIILDKIRQITV-QSFQDKQNMNTVPKYTCRIVIPKSAASAIIG 123
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G + +++D TG I++ E L N+ +I I G ++++ + +V ++++
Sbjct: 124 KGGQQIKQLQDSTGAKIQISSREDGL-----NERIISIIGPFESISDTAIKVTNSIQNDP 178
Query: 443 KSGEILN 449
++LN
Sbjct: 179 NLKDLLN 185
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 79/179 (44%), Gaps = 28/179 (15%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH---CEGGFPGSDHRVILVVGSGSIDRRI 84
+++ V G +IG++GSII+SI T C + FP + RV++
Sbjct: 20 KMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLV----------- 68
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA---YCGLLANTTKIG 141
C G+ A++ + +++ ++ + D + C ++ +
Sbjct: 69 -LC--------GKQEQINNALLIILDKIRQITVQSFQDKQNMNTVPKYTCRIVIPKSAAS 119
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
++GKGG+ + +++ +GAKI + +++++I I G ++ + VT +Q+
Sbjct: 120 AIIGKGGQQIKQLQDSTGAKIQI--SSREDGLNERIISIIGPFESISDTAIKVTNSIQN 176
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 191
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 192 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 242
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 243 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 299
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 300 DPQSSSCLN-----ISYANVAGP 317
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 30/239 (12%)
Query: 225 DPHREFFP----HLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLF 280
+PH FP H + L G SD + + + P L ++G E L++L
Sbjct: 86 NPHPFSFPFVIRHPQIKAALQGELSD------TKIGHSYYNTPNLLEEG---EYFLKVLI 136
Query: 281 SGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVVTISAL-EYLDTR 332
+ A IIGK G + LQ +GA I L+KS ERV + E L+
Sbjct: 137 PSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVCLVQGTAEALNAV 192
Query: 333 HSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
HS + + EV + N A ++V G + G G + V
Sbjct: 193 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKA 252
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
+ + +G ++L ++ G Q VV +SGE + V A+S +V +++ + +S LN
Sbjct: 253 VMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 308
>gi|348536733|ref|XP_003455850.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 678
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IGR G I+ I++++ C++ G R I + GS +R +D+
Sbjct: 108 PDSMVGLIIGRGGEQINKIQQESGCKVQIAHDSVGLPERSISLTGSPDAIQRARALLDDI 167
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
V G E ++ Q + ++ ++ K G+++GKGG +
Sbjct: 168 VSRGHESTNGQSSSMQE------------------------MIIPAGKAGLIIGKGGETI 203
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
+++ +G K++++ + D+ ++I G V++A V LQ
Sbjct: 204 KQLQERAGVKMILIQDASQPPNIDKPLRIIGDPYKVQQAKEMVNEILQE 252
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 137/336 (40%), Gaps = 84/336 (25%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG++G ++ +R +T + PG RV+ V G
Sbjct: 47 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQ------- 99
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE--VEGD---GDGDDVAYCG-----LL 134
+R R + + A+ +EG G G V+ G LL
Sbjct: 100 ---------------------LRSLARAYAIVAKGLLEGAPQMGMGGIVSNNGTHPVRLL 138
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKA 190
+ ++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA
Sbjct: 139 ISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKA 193
Query: 191 LVAVTTCLQ----------------HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHL 234
+ + CL S P+ N P + +N+S R++
Sbjct: 194 IWEIGKCLLDDWQRGTGTVLYNPAVRASLSGSQPLNNNPPAGNGYQNNTSS--RQYN--- 248
Query: 235 SLVPPLTGNP---SDNASEFHSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGI 288
TGN SD S+S +R +P + + G + Q +++ G I
Sbjct: 249 -----RTGNGADFSDGGYNRRSNSDAGNRGYPLVTEDGEEIQTQNISIPADMVGC----I 299
Query: 289 IGKRGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
IG+ G + ++ +SGA IS A AP ++GER+ TI
Sbjct: 300 IGRGGTKITEIRRSSGARISIAKAPHDETGERMFTI 335
>gi|189441939|gb|AAI67653.1| LOC100170586 protein [Xenopus (Silurana) tropicalis]
Length = 449
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IGR G I+ I++++ C++ G RV+ + GS ++ +D+
Sbjct: 101 PDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDDI 160
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
V G +Q + +G + + ++ K G+++GKGG +
Sbjct: 161 VARGRGGPPSQ----------------FHDNSNGQNGSLQEIMIPAGKAGLIIGKGGETI 204
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICF 211
+++ +G K++++ + D+ ++I G V++A V L+ E+ F
Sbjct: 205 KQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLR-----ERDQANF 259
Query: 212 NR----PIEKVFYSNSSDPHREF----FPHLSLVPPLTGNPSDNASEFHS 253
+R P + + ++ PH PP +PS + ++S
Sbjct: 260 DRNEYGPPHQYPPQGWGSTYPQWGQPPAPHDPTKPPAPTDPSAAWAAYYS 309
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 183/443 (41%), Gaps = 77/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ + + +P +++ + V L + IIGK+G ++ L +GA
Sbjct: 385 PTSGPPSAMTP----PYPQFEQQSETETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGA 438
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 439 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 486
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 487 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 541
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 542 GHFYACQVAQRKIQEILTQVKQH 564
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 199
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 200 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 250
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 251 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 307
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 308 DPQSSSCLN-----ISYANVAGP 325
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
H+S D P L + + E L++L + A IIGK G + LQ +GA I +
Sbjct: 116 HTSVERTDTSGPNLQIRAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSK 175
Query: 312 P---LTKSGERVVTISAL-EYLDTRHSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDA 365
+ ERV + E L+ HS + + EV + N A
Sbjct: 176 SKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 235
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYK 425
++V G + G G + V + + +G ++L ++ G Q VV +SGE +
Sbjct: 236 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPE 292
Query: 426 NVQNALSEVVGRLRHNLKSGEILN 449
V A+S +V +++ + +S LN
Sbjct: 293 QVHKAVSAIVQKVQEDPQSSSCLN 316
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ GS
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M + + E +++S + E + +V+ +L +
Sbjct: 102 EAIMAVMDFIMEKIREKPDLTSKTTVDFDSGKATAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ ESG+ + + ++ ++ I + G + AL+ + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCITVIGEKENNRNALLMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ +S C N V Y++ S P + P
Sbjct: 207 AKVADDPQSGTCLN-----VSYADVSGPVANYNP 235
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 23/183 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRVILVVGSGSIDRRIM 85
FRLV T VGGLIGR G I + DT+ R+ E + +R++L+ +
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEE------ 152
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD----GDGDDVAYCGLLANTTKIG 141
E+ +A I++F + ++E ++ D G + LL + +
Sbjct: 153 --------SQAELPPAMDAAIKIFMHINDIE-KINCDDTLSGSAPEKCSAKLLVPSAQAT 203
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAA---IDDQLIQITGATLAVKKALVAVTTCL 198
++GK G + ++ +GA + ++ + +D++++ I GA L V AL +V L
Sbjct: 204 HLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVL 263
Query: 199 QHL 201
+
Sbjct: 264 RKF 266
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 20/238 (8%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALIS-FAAPLTKSGERVVTISALEYLDTRHS 334
R++ + G+IG+RG ++ L + A + A + R+V ISA E
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEESQAELP 158
Query: 335 PVQNAAVLVFARSVEVEGQQGFSSGENKG-DAVAVSILVGADFVGCLTGSGSSAVSEMED 393
P +AA+ +F ++E + + + +LV + L G + +++
Sbjct: 159 PAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIGKQGVRIKSIQE 218
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARP 453
TG +K++ ++L ++ ++ I G V +AL V+G LR L +L+
Sbjct: 219 TTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVLRKFLVDHGVLH---- 274
Query: 454 RSPSGRVGGPALHKLHQSVALSPEFEQETIAVQGVDQFVLPLNRSQTLQTEGRRHATP 511
+ +Q+V + + +E Q + LP+N+ L H TP
Sbjct: 275 ----------LFERKNQAVGEAHDNSKENQVNQVASDYRLPVNKDILLPD----HRTP 318
>gi|312085525|ref|XP_003144713.1| hypothetical protein LOAG_09137 [Loa loa]
Length = 327
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 20/165 (12%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
LR+L + A IIGK+G V+++Q A +S P +++ ERVV + A
Sbjct: 42 LRLLVTSRGAGAIIGKKGESVKNIQAECDATVSV--PDSQTPERVVQLVAT------VEN 93
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
V ++ AR EV Q S + +LV G + G G S + E+ +
Sbjct: 94 VVRCVEMIIARIDEVHDNQDRDS--------ELKVLVHQSHAGAVIGRGGSRIKELREEN 145
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRH 440
G D+K+ C + +IQI+G+ + + L ++ L+
Sbjct: 146 GVDLKVYSE----CCPQSTERIIQINGKPEKIVACLVTIISTLKE 186
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 97 EVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRI 156
++ +T E V+R E + EV + D D + +L + + G V+G+GG + +R
Sbjct: 86 QLVATVENVVRCVEMIIARIDEVHDNQDRD--SELKVLVHQSHAGAVIGRGGSRIKELRE 143
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIE 216
E+G + + C +++IQI G + LV + + L+ + K P +RP E
Sbjct: 144 ENGVDLKVY-SECCPQSTERIIQINGKPEKIVACLVTIISTLKEIPI--KGP---SRPYE 197
Query: 217 KVFY 220
+F+
Sbjct: 198 SIFF 201
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 187/462 (40%), Gaps = 83/462 (17%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
GY S R + P R++ PT VG +IG+ G+ I + + T+ ++
Sbjct: 188 GYGSPRPRQHDFP-----LRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDI-------- 234
Query: 69 HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV-EAEVEGDGDGDD 127
HR +G+ ++ I + ST E + ++ + E +D
Sbjct: 235 HRK---ENAGAAEKPIT------------IHSTPEGCSAACRMILDIMQKEANETKTTED 279
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
+ +LA+ + +G ++GK GRN+ ++ ++G KI + +++ D I T+ V
Sbjct: 280 IP-LKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITI------SSLQDLTIYNPERTITV 332
Query: 188 KKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLT 241
K ++ A C + +K + I + + P F L ++PP
Sbjct: 333 KGSIDAC--CKAEVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAA 390
Query: 242 GNPSD---------NASEFHSSSADADRDHPGL-------DKKGRKQEVALRMLFSGWTA 285
G S N HSS P ++ +QEV LF A
Sbjct: 391 GPRSAVPAVAPAGYNPFLSHSSHLSGLYGVPPASAIPHQHSQQAPEQEVV--YLFIPTQA 448
Query: 286 SG-IIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
G +IGK+G ++ L + +GA I A A ER+V I+ + A +
Sbjct: 449 VGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFK------AQGRI 502
Query: 344 FARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVG 403
F + E + FS+ E + I V + G + G G V+E++++T ++ +V
Sbjct: 503 FGKLKE---ENFFSAKEEV--KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVP 556
Query: 404 GEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLRHN 441
+Q +ND V ++ISG + + Q + E++ +++
Sbjct: 557 RDQ---TPDENDEVFVKISGHFFASQTAQRKIREIIQQVKQQ 595
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 183/443 (41%), Gaps = 77/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ + + +P +++ + V L + IIGK+G ++ L +GA
Sbjct: 385 PTSGPPSAITP----PYPQFEQQSETETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGA 438
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 439 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 486
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 487 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 541
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 542 GHFYACQVAQRKIQEILTQVKQH 564
>gi|321455064|gb|EFX66209.1| hypothetical protein DAPPUDRAFT_332423 [Daphnia pulex]
Length = 384
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
+ LR+L A IIGK G+ + L+ + A I P ER++TI LD
Sbjct: 32 DTELRLLVYSKVAGSIIGKGGSNISKLRTENHATILL--PDCPGPERILTIQG--NLDAV 87
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
+ +QN V EV +G +G GD+ A +LV +GC+ G G + V E+
Sbjct: 88 INVLQN----VLPSLEEVSKIRGERTG-RVGDSDA-RLLVHQSQIGCIIGRGGAKVKELR 141
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEI 447
+ TGT I + + C D ++QI G+ + + +++ ++ + G I
Sbjct: 142 ESTGTRITVYS----VCCPRSTDRIVQILGKPSDCGECIKQIIALVKESQVKGPI 192
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 31/160 (19%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI---HCEGGFPGSDHRVILVVGSGSIDRR 83
RL+ + V G +IG+ GS IS +R + I C G R++ + G++D
Sbjct: 35 LRLLVYSKVAGSIIGKGGSNISKLRTENHATILLPDCPG-----PERILTI--QGNLDAV 87
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD-GDGDDVAYCGLLANTTKIGV 142
I +N V+ E + ++ E G GD D LL + ++IG
Sbjct: 88 INVLQN---------------VLPSLEEVSKIRGERTGRVGDSD----ARLLVHQSQIGC 128
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG 182
++G+GG V +R +G +I + C D+++QI G
Sbjct: 129 IIGRGGAKVKELRESTGTRITVY-SVCCPRSTDRIVQILG 167
>gi|193203009|ref|NP_491627.2| Protein M01A10.1 [Caenorhabditis elegans]
gi|373220094|emb|CCD72087.1| Protein M01A10.1 [Caenorhabditis elegans]
Length = 586
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 33/176 (18%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD----HRVILV 74
N P +S ++ P VG ++G GS I I +T+ +I P D R ++V
Sbjct: 231 NSPVAAMSLQVKVPRSTVGAIMGLQGSNIKKISNETETKIQF---MPDDDPKLMERTLVV 287
Query: 75 VGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLL 134
+G+ + ++ C R+ +++ VEA E + Y +L
Sbjct: 288 IGNKN---KVYVC------------------ARLLQKI--VEANSENANTPISLFY--ML 322
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+K G+V+G+GG + ++ ESGA M P+ +AI+ Q + I G+ V+ A
Sbjct: 323 IPASKCGLVIGRGGETIRQINKESGAYCEMSRDPSISAIEKQFV-IRGSETQVEHA 377
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSI 80
V +++ P G +IG+ G I+ +++DT R+ +P + RV LV GS
Sbjct: 67 VYHLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEA 126
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
+M D + E +++S +A+ ++ E D +L +
Sbjct: 127 IMAVMSFIMDKIKEKPDLTS--KAI---------NTSDTESKLSADRSKQVKILIPNSTA 175
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPP--ACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GKGG + +M+ ESG+ I + A + ++ + I G KKA++ + L
Sbjct: 176 GMIIGKGGNYIKQMKEESGSYIQLSQKSNDASLQLQERCVTIIGEMENNKKAILKL---L 232
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDN-ASEFHSSSAD 257
+ +S C N V Y++ P F P TG+P N AS +S+++
Sbjct: 233 AKVVEDPQSGSCLN-----VSYADIPGPVANFNP--------TGSPYANPASPGYSTASL 279
Query: 258 ADRDHPGL 265
+ P L
Sbjct: 280 SSAVAPML 287
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 183/443 (41%), Gaps = 77/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ + + +P ++ + + V L + IIGK+G ++ L +GA
Sbjct: 385 PTSGPPSAMTP----PYPQFEQAPQTETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGA 438
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 439 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 486
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 487 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 541
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 542 GHFYACQVAQRKIQEILTQVKQH 564
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 178/443 (40%), Gaps = 75/443 (16%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I + ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK ++
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGSI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE-----FFPHLS-LVPPLTGNPSDN 247
C M+K + + + + P FP S VPP + S
Sbjct: 334 ENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGA 393
Query: 248 ASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
A +SS +++ + + IIGK+G ++ L + A I
Sbjct: 394 AP--YSSFMPPEQE-------------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 438
Query: 308 SFAAPLTKSGE-RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
A P T + R+V I+ + A ++ + E + F G + +
Sbjct: 439 KIAPPETPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKL 487
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY-- 424
I V A G + G G V+E++++T ++ +V +Q Q V+++I G +
Sbjct: 488 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPDENEQ--VIVKIIGHFYA 544
Query: 425 -KNVQNALSEVVGRLRHNLKSGE 446
+ Q + +++ +++ + G+
Sbjct: 545 SQMAQRKIRDILAQVKQQHQKGQ 567
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 287 GIIGKRGAIVRSLQNASGALISFA-----APLTKSGERVVTISALEYLDTRHSPVQNAAV 341
IIG +G+ +R++ SGA + A PL + ER VTI + A
Sbjct: 358 AIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWK------AQY 411
Query: 342 LVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
L+F + E +GF SG + + V ILV + VG + G G V E++ VTG+ IKL
Sbjct: 412 LIFEKMRE----EGFVSGTDDV-RLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 466
Query: 402 VGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
E + + I G + +VQ+A
Sbjct: 467 --PEHTTNTPVDEETTVHIIGPFFSVQSA 493
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCE 88
L P VG +IG GS I +I R F G+ ++ + ++++ E
Sbjct: 349 LYIPNNAVGAIIGTKGSHIRNIIR-----------FSGASVKIAPLEADKPLEQQ---TE 394
Query: 89 NDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC-GLLANTTKIGVVVGKG 147
V + G + +A +FE+M E E V G DDV +L + ++G ++GKG
Sbjct: 395 RKVTIVGTP-EAQWKAQYLIFEKMRE-EGFVSGT---DDVRLTVEILVPSAQVGRIIGKG 449
Query: 148 GRNVTRMRIESGAKIVMLPPPACAAIDDQ-LIQITGATLAVKKALVAVTTCL 198
G+NV ++ +G+ I + +D++ + I G +V+ A + T +
Sbjct: 450 GQNVRELQRVTGSIIKLPEHTTNTPVDEETTVHIIGPFFSVQSAQRRIRTMM 501
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G E R+L S +IG++G ++ + + S A I ER V ISA +
Sbjct: 115 GWPGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDE 174
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
D P + + V R + + + + A +LV A G L G + +
Sbjct: 175 PDALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTI 234
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
++D + ++++ E V A +D V++I GE +V A+ + LR L +L
Sbjct: 235 KSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDRSVL 292
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 17/178 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ T VG LIGR G I + ++K RI G PG R +++ D
Sbjct: 122 FRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDAL--- 178
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA-YCGLLANTTKIGVVV 144
V + ++RV R+ + +++E + G A LL ++ G ++
Sbjct: 179 -----------VPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLI 227
Query: 145 GKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
GK G + ++ S + +L P A DD++++I G V KA+ + L+
Sbjct: 228 GKQGTTIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKF 285
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 16 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 75
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 76 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 126
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 127 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 183
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 184 DPQSSSCLN-----ISYANVAGP 201
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 37/209 (17%)
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-- 317
R+ PG + E L++L + A IIGK G + LQ +GA I L+KS
Sbjct: 2 RELPG--SSAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDF 55
Query: 318 -----ERVVTIS-ALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE----------- 360
ERV + E L+ HS A V E Q + E
Sbjct: 56 YPGTTERVCLVQGTAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTM 106
Query: 361 NKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQI 420
N A ++V G + G G + V + + +G ++L ++ G Q VV +
Sbjct: 107 NPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-V 163
Query: 421 SGEYKNVQNALSEVVGRLRHNLKSGEILN 449
SGE + V A+S +V +++ + +S LN
Sbjct: 164 SGEPEQVHKAVSAIVQKVQEDPQSSSCLN 192
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 175/421 (41%), Gaps = 58/421 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ R++ PT VG +IG+ G+ I +I + T +I HR +G+ ++ I
Sbjct: 195 IPLRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDI--------HRK---ENAGAAEKPI 243
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ ST + + + ++ + D + +LA+ + +G ++
Sbjct: 244 T------------IHSTPDGCSNACKTIMDIMQKEALDTKFTEEIPLKILAHNSFVGRLI 291
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ E+G KI + P + D + T+ VK ++ A + + M
Sbjct: 292 GKEGRNLKKIEQETGTKITISP------LQDLTLYNPERTITVKGSIEACAKAEEEV--M 343
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + ++ P L L P T P S SS H G
Sbjct: 344 KKIRESYESDMAAMNLQSNLIPGLNLN-ALGLFP--TTAPGMGPS---MSSITPPGAHGG 397
Query: 265 LDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFA-APLTKSGERVVT 322
G E LF A G IIGK+G ++ L + +GA I A A + +R+V
Sbjct: 398 SSSFGGHPESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVI 457
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I + A +F + E + F G + + I V A G + G
Sbjct: 458 IVGPPEAQFK------AQCRIFGKLKE----ENF-FGPKEEVKLEAHIKVPAFAAGRVIG 506
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRL 438
G V+E++++T ++ +V +Q +ND V+++ISG + + Q + E++ ++
Sbjct: 507 KGGKTVNELQNLTCAEV-VVPRDQT---PDENDQVIVKISGHFFACQLAQRKIQEILAQV 562
Query: 439 R 439
R
Sbjct: 563 R 563
>gi|341896366|gb|EGT52301.1| hypothetical protein CAEBREN_06932 [Caenorhabditis brenneri]
Length = 538
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 39/192 (20%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE-GGFPGSDHRVILVVGSGSIDRRIMFC 87
++ P G +IG+ G +I + ++T +I + P S+ R+ ++VGS
Sbjct: 233 VIVPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPDSDPNSEDRIAVIVGS---------- 282
Query: 88 ENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDG---DGDDVAYCGLLANTTKIGVV 143
+E + R ER+ E V ++ +G +G + Y + A +K G+V
Sbjct: 283 --------------REQIYRATERITEIVNKAIKNNGVNPNGQQIFYLHVPA--SKCGLV 326
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG N+ ++ ++GA + P D+++ +I G + A HL
Sbjct: 327 IGKGGENIKQIERDTGATCGLAGPAEQKNDDEKVFEIKGTQFQIHHAA--------HLVK 378
Query: 204 MEKSPICFNRPI 215
++ I N P+
Sbjct: 379 IKVGEIAPNTPV 390
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 32/201 (15%)
Query: 16 GPLNLPDDVVSFRLVCPTP--VVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
G LN+ DD ++ + P P +VG +IG+ G+ I I++ + CR+ + +D
Sbjct: 44 GDLNM-DDELNIIDIYPVPEKMVGLVIGKGGTEIRLIQQTSACRVQMDADDQSNDG---- 98
Query: 74 VVGSGSIDRRIMFCENDVVVEG--GEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC 131
I C +EG +V+ ++ + +V R + V + D+V
Sbjct: 99 ----------IRNC----TIEGTPDQVAIAKQMITQVINRNQGI---VPTESTDDEVTE- 140
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAI-DDQLIQITGATLAVKKA 190
+L + KIG+V+GKGG + ++ +SG + + + +A + ++++G AV+ A
Sbjct: 141 DILIPSDKIGLVIGKGGETIRTVQEQSGLRTCNVVQDSTSATGQPKPLRMSGTPTAVETA 200
Query: 191 LVAVTTCLQ----HLSTMEKS 207
VT + ++S ++KS
Sbjct: 201 KALVTNIMNNIQGNISMLQKS 221
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 220
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 221 VHSFIAEKVREIPQ-AMTKPEVVNILQP--------QTTMNPDRAKQAKLIVPNSTAGLI 271
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 272 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 328
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 329 DPQSSSCLN-----ISYANVAGP 346
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 35/196 (17%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG-------ERVVTISA 325
E L++L + A IIGK G + LQ +GA I L+KS ERV +
Sbjct: 158 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFYPGTTERVCLVQG 213
Query: 326 L-EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-----------NKGDAVAVSILVG 373
E L+ HS A V E Q + E N A ++V
Sbjct: 214 TAEALNAVHS--------FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVP 264
Query: 374 ADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSE 433
G + G G + V + + +G ++L ++ G Q VV +SGE + V A+S
Sbjct: 265 NSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSA 321
Query: 434 VVGRLRHNLKSGEILN 449
+V +++ + +S LN
Sbjct: 322 IVQKVQEDPQSSSCLN 337
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 183 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 242
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 243 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 293
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 294 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 350
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 351 DPQSSSCLN-----ISYANVAGP 368
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 15/193 (7%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVT 322
D + E L++L + A IIGK G + LQ +GA I + + ERV
Sbjct: 173 DVANEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 232
Query: 323 ISAL-EYLDTRHSPVQNAA-----VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADF 376
+ E L+ HS + + V + Q + N A ++V
Sbjct: 233 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQ---TTMNPDRAKQAKLIVPNST 289
Query: 377 VGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVG 436
G + G G + V + + +G ++L ++ G Q VV +SGE + V A+S +V
Sbjct: 290 AGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQ 346
Query: 437 RLRHNLKSGEILN 449
+++ + +S LN
Sbjct: 347 KVQEDPQSSSCLN 359
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 67
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 68 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 118
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 119 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 175
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 176 DPQSSSCLN-----ISYANVAGP 193
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 168/429 (39%), Gaps = 76/429 (17%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P + P RL+ + +VG +IGR GS I I + ++ R+ HR V
Sbjct: 136 PTDFP-----LRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDV--------HRKDNV-- 180
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
GS+++ I G + A R+ E M + E + +LA+
Sbjct: 181 -GSLEKAITIY--------GNPDNCTNACKRILEVMQQ-----EANNTNKGEICLKILAH 226
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKALVAVT 195
IG ++GKGG + R+ E+ KI + + + +++I + G + KA ++
Sbjct: 227 NNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGTIENMAKAESQIS 286
Query: 196 TCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL-TGNPSDNASEFHSS 254
L+ + + P FP L + + TG A
Sbjct: 287 AKLRQSYENDLQVLA---------------PQSIMFPGLHPMAMMSTGRGFCGAPPPFPP 331
Query: 255 SADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFAAPL 313
A G ++G L+ A G IIG +G+ +R++ S A + A PL
Sbjct: 332 PIYAPLAGQGGAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIA-PL 390
Query: 314 TKSG----------ERVVTISALEYLDTRHSP--VQNAAVLVFARSVEVEGQQGFSSGEN 361
+ ER VTI SP A L+F + E +GF SG +
Sbjct: 391 EQDKVIEGSVAAQQERKVTIVG--------SPEAQWKAQYLIFEKMRE----EGFMSGSD 438
Query: 362 KGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND--VVIQ 419
+ V+I+V + VG + G G V E++ VTG+ IKL Q AA ND +
Sbjct: 439 DV-RLTVAIVVASSQVGRIIGKGGQNVRELQRVTGSLIKLPEQPQP-PTAAGNDHETTVH 496
Query: 420 ISGEYKNVQ 428
I G + +VQ
Sbjct: 497 IVGHFYSVQ 505
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 42/177 (23%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---------EGGFPGSDHRVILVVGSGS 79
L P VG +IG GS I +I R + + EG R + +VGS
Sbjct: 356 LYIPNNAVGAIIGTKGSHIRNIIRFSNASVKIAPLEQDKVIEGSVAAQQERKVTIVGSPE 415
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG-DDVAY-CGLLANT 137
+ + +FE+M E EG G DDV ++ +
Sbjct: 416 AQWKAQYL--------------------IFEKMRE-----EGFMSGSDDVRLTVAIVVAS 450
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLP----PPACAAIDDQ-LIQITGATLAVKK 189
+++G ++GKGG+NV ++ +G+ ++ LP PP A D + + I G +V++
Sbjct: 451 SQVGRIIGKGGQNVRELQRVTGS-LIKLPEQPQPPTAAGNDHETTVHIVGHFYSVQE 506
>gi|392922650|ref|NP_001256769.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
gi|11065662|emb|CAC14410.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
Length = 413
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 50/214 (23%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D +S +++ P+ VG +IG+ G + +++ D CR+ +PG+ R+ LV G
Sbjct: 40 DHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKG--- 96
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV------AYCGL 133
R+ N+++ AVI + + +G D D A +
Sbjct: 97 ---RL----NNIM-----------AVIESIQDKIREKCADQGGSDAFDHKNTSRGAEIKI 138
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
+ T G+V+GK G N+ +R + G +I + P L ++ T+A +A
Sbjct: 139 VMPNTSAGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVV--TVAHDEA--- 193
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPH 227
+ LQ S R +EKV +SDPH
Sbjct: 194 -SALLQAAS----------RVLEKV----ASDPH 212
>gi|89272465|emb|CAJ82621.1| fubp1 [Xenopus (Silurana) tropicalis]
Length = 653
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
VV+ P +VG +IGR G IS I++++ C+I GG P
Sbjct: 88 VVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP--------------- 132
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG--DGDGDDVAYCGLLANTT 138
DR M G S Q A R+ +++ E G G+G A ++ +
Sbjct: 133 DRSCMLT--------GSPDSVQ-AAKRLLDQIVEKGRPTPGFHHGEGSGNAVQEIMIPAS 183
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
K G+V+GKGG + +++ +G K+VM+ D+ ++I G V++A
Sbjct: 184 KAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQA 235
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 178/443 (40%), Gaps = 75/443 (16%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 167 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 210
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I + ST E + + E+ + D D +
Sbjct: 211 KENAGAAEKAI------------SIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKI 258
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK ++
Sbjct: 259 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGSI-- 310
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE-----FFPHLS-LVPPLTGNPSDN 247
C M+K + + + + P FP S VPP + S
Sbjct: 311 ENCCKAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGA 370
Query: 248 ASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
A +SS +++ + + IIGK+G ++ L + A I
Sbjct: 371 AP--YSSFMPPEQE-------------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 415
Query: 308 SFAAPLTKSGE-RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
A P T + R+V I+ + A ++ + E + F G + +
Sbjct: 416 KIAPPETPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKL 464
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY-- 424
I V A G + G G V+E++++T ++ +V +Q Q V+++I G +
Sbjct: 465 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPDENEQ--VIVKIIGHFYA 521
Query: 425 -KNVQNALSEVVGRLRHNLKSGE 446
+ Q + +++ +++ + G+
Sbjct: 522 SQMAQRKIRDILAQVKQQHQKGQ 544
>gi|45361433|ref|NP_989293.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|39794540|gb|AAH63902.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 653
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
VV+ P +VG +IGR G IS I++++ C+I GG P
Sbjct: 88 VVTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP--------------- 132
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG--DGDGDDVAYCGLLANTT 138
DR M G S Q A R+ +++ E G G+G A ++ +
Sbjct: 133 DRSCMLT--------GSPDSVQ-AAKRLLDQIVEKGRPTPGFHHGEGSGNAVQEIMIPAS 183
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
K G+V+GKGG + +++ +G K+VM+ D+ ++I G V++A
Sbjct: 184 KAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIAGDPYKVQQA 235
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 180/443 (40%), Gaps = 75/443 (16%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ S+ H + + V L + IIGK+G ++ L +GA
Sbjct: 385 PTSGP--PSAMTPPYPHNSFTRSSETETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGA 440
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 441 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 488
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 489 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 543
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 544 GHFYACQVAQRKIQEILTQVKQH 566
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ G+
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTV 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++S + E + +V+ +L +
Sbjct: 102 DAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ ESG+ + + ++ ++ I + G +AL + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCITVIGEKENNHRALHMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ +S C N V Y++ S P + P
Sbjct: 207 AKVADDPQSGTCLN-----VSYADVSGPVANYNP 235
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 67 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 117
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 118 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 174
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 175 DPQSSSCLN-----ISYANVAGP 192
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 182/443 (41%), Gaps = 79/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 350 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 396
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 397 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 441
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 442 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 494
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
+V TC + + K E S + H P L+ L PP +G P
Sbjct: 495 --SVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 547
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
S A +P ++ + + + + IIGK+G ++ L +GA
Sbjct: 548 PT-----SGPPSAMPPYPQFEQ---SETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 599
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 600 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 647
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
+ I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 648 -VKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQT---PDENDQVVVKIT 702
Query: 422 GEYKNVQNA---LSEVVGRLRHN 441
G + Q A + E++ +++ +
Sbjct: 703 GHFYACQVAQRKIQEILTQVKQH 725
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ G+
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTV 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++S + E + +V+ +L +
Sbjct: 102 DAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ ESG+ + + ++ ++ I + G +AL + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCITVIGEKENNHRALHMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ +S C N V Y++ S P + P
Sbjct: 207 AKVADDPQSGTCLN-----VSYADVSGPVANYNP 235
>gi|268562247|ref|XP_002638547.1| Hypothetical protein CBG05583 [Caenorhabditis briggsae]
Length = 399
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 45/236 (19%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D +S +++ P+ VG +IG+ G + +++ D CR+ +PG+ R+ LV G +
Sbjct: 39 DHLSIKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQMSKNSETYPGTSERICLVKGRLN 98
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
++ D + E +A F+ + G+++ ++ T
Sbjct: 99 NIMSVIESIQDKIRE----KCADQAGSDAFDH--------KNTSRGNEIK---IVMPNTS 143
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+V+GK G N+ +R + G +I + P L ++ AL+ +
Sbjct: 144 AGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHDESGALLQAAS--- 200
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPH-------REFFPHLSLVPPLTGNPSDNA 248
R +EKV +SDPH +F S P GN S NA
Sbjct: 201 -------------RVLEKV----ASDPHHSSEINKEDFGKAPSSNTPSGGNQSSNA 239
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 67 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 117
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 118 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 174
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 175 DPQSSSCLN-----ISYANVAGP 192
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 100 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 146
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I ST E + + E+ + D +
Sbjct: 147 ---KENAGAAEKSITIL------------STPEGTSAACKSILEIMHKEAQDIKFTEEIP 191
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 192 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 244
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
+V TC + + K E S + H P L+ L PP +G P
Sbjct: 245 --SVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 297
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 298 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 350
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 351 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 398
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 399 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 453
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 454 GHFYACQVAQRKIQEILTQVKQH 476
>gi|358334721|dbj|GAA27863.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 759
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 22/146 (15%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
DD V +++ P+ G +IG+ G I I++DT ++ +PG+ RV L+VGS
Sbjct: 35 DDNVHLKVLIPSIAAGAVIGKYGEAIGKIQKDTNTKVKISKQDEFYPGTTERVCLIVGS- 93
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVI-RVFERM-WEVEAEVEGDGDGDDVAYCGLLAN 136
+EG V S ++ R+ E+ A EG + + +L
Sbjct: 94 --------------MEG--VMSVHNYIMDRILEKPDPNPHATCEGRLNVERHKQVKILVP 137
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKI 162
+ G+V+GKGG + ++ ++GA +
Sbjct: 138 NSTAGMVIGKGGSYIQEIKEKTGAYV 163
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 128
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 129 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 179
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 180 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 236
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 237 DPQSSSCLN-----ISYANVAGP 254
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG--- 317
+ P L ++G E L++L + A IIGK G + LQ +GA I L+KS
Sbjct: 57 NTPNLLEEG---EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK----LSKSKDFY 109
Query: 318 ----ERVVTIS-ALEYLDTRHSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
ERV + E L+ HS + + EV + N A +
Sbjct: 110 PGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 169
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+V G + G G + V + + +G ++L ++ G Q VV +SGE + V A
Sbjct: 170 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKA 226
Query: 431 LSEVVGRLRHNLKSGEILN 449
+S +V +++ + +S LN
Sbjct: 227 VSAIVQKVQEDPQSSSCLN 245
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ GS
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSV 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D ++E ++ + + +A E D +L +
Sbjct: 102 DAIMAVM----DFIME--KIREKPDLTTKTTVDFDSGKATAERD------KQVKILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ ESG+ + + ++ ++ I + G + AL+ + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQERCITVIGEKENNRNALLMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ +S C N V Y++ S P + P
Sbjct: 207 AKVADDPQSGTCLN-----VSYADVSGPVANYNP 235
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 21/199 (10%)
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKS 316
R H G G L++L G A IIGK G + LQ +GA + + +
Sbjct: 34 RSHYGTGGDGTYH---LKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGT 90
Query: 317 GERVVTISA-----LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA-VAVSI 370
ERV I+ + +D ++ L +V+ F SG+ + V I
Sbjct: 91 TERVCLITGSVDAIMAVMDFIMEKIREKPDLTTKTTVD------FDSGKATAERDKQVKI 144
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
LV G + G + + ++++ +G+ +++ Q + + I + GE +N +NA
Sbjct: 145 LVPNSTAGMIIGKAGNYIKQIKEESGSYVQI---SQKAKDVSLQERCITVIGEKENNRNA 201
Query: 431 LSEVVGRLRHNLKSGEILN 449
L ++ ++ + +SG LN
Sbjct: 202 LLMILAKVADDPQSGTCLN 220
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
+SA E D P + + V + V V+ S G V +LV G L G
Sbjct: 2 VSAKEEPDCSIPPAVDVLLRVHKQVVNVDPHPA-DSASGAGRPVVTRLLVADTQAGSLIG 60
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
S + +D TG +I+++G E + A ++D V++I GE V A+ V LR L
Sbjct: 61 KQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRKFL 120
Query: 443 --KSGEILNEARPRSPSGRV 460
+S ++ E + + P RV
Sbjct: 121 VDRSIVVVFETQMQRPDVRV 140
>gi|397569372|gb|EJK46704.1| hypothetical protein THAOC_34610 [Thalassiosira oceanica]
Length = 507
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 16/180 (8%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSID 81
V+ +++ G +IGRSG IS ++ + RI G +PG+ R+ LV G+ S
Sbjct: 86 VAIKVLVSNSASGLIIGRSGQTISELQAKSHARIKLSQGGDYYPGTSDRICLVQGALSC- 144
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
+ V+ + E+ S Q+ +V E+ + E + V +L + G
Sbjct: 145 --VKVAIELVLAKLYELQSLQQVSTQVTEQSADNEPSQQVI-QPPPVFIIRVLMPSACCG 201
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPP---------ACAAIDDQLIQITGATLAVKKALV 192
+V+G+GG N+ ++ +S + L P A + +++++ ITG T A + V
Sbjct: 202 MVIGRGGSNIKELKEKSRVSFIQLSPKEHEVLVGHGATLSTNERIMTITGPTFATCTSCV 261
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SMSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 209
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 210 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 260
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 261 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 317
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 318 DPQSSSCLN-----ISYANVAGP 335
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 94/240 (39%), Gaps = 38/240 (15%)
Query: 225 DPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWT 284
DP +FFP PP +P+ S S K + E L++L +
Sbjct: 110 DPTSQFFPGPIGDPPRPCHPAHGRSPGSVS-----------PPKTEEGEYFLKVLIPSYA 158
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISAL-EYLDTRHSPVQNAA 340
A IIGK G + LQ +GA I + + ERV + E L+ HS
Sbjct: 159 AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHS------ 212
Query: 341 VLVFARSVEVEGQQGFSSGE-----------NKGDAVAVSILVGADFVGCLTGSGSSAVS 389
A V E Q + E N A ++V G + G G + V
Sbjct: 213 --FIAEKVR-EIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 269
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
+ + +G ++L ++ G Q VV +SGE + V A+S +V +++ + +S LN
Sbjct: 270 AVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 326
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSI 80
+V +++ P+ VG LIG+ G + +++ ++ CR+ +PG++ R+ LV G +
Sbjct: 1 MVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIAS 60
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFE-RMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
++ +DV++E +F+ + E + E++ L+ T
Sbjct: 61 VLKV----SDVILEKIREKVDNNTPSDIFDHKGMERKNEMK------------LVVPNTS 104
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLP 166
G+V+GK G + +R ++GA I + P
Sbjct: 105 AGMVIGKSGARIKEIREQTGANIQVYP 131
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 185
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 186 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 236
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 237 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 293
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 294 DPQSSSCLN-----ISYANVAGP 311
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 9/180 (5%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISAL-EYLDT 331
L++L + A IIGK G + LQ +GA I + + ERV + E L+
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 185
Query: 332 RHSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVS 389
HS + + EV + N A ++V G + G G + V
Sbjct: 186 VHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVK 245
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
+ + +G ++L ++ G Q VV +SGE + V A+S +V +++ + +S LN
Sbjct: 246 AVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 302
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 275 ALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTK--SGERVVTISALEYLDTR 332
++R+L + +IGK GA VR ++ +GA I + K SGER++ +S+ E
Sbjct: 213 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQE-IDKDASGERLIIVSSNEIPTEP 271
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSG--------ENKGDAVAVSILVGADFVGCLTGSG 384
SP A +L+ + + E ++ G GD ++ IL ++ +G + G
Sbjct: 272 ISPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDK-SIRILCASELIGSVIGKS 330
Query: 385 SSAVSEMEDVTGTDIKL------VGGEQVLGCAAQNDVVIQ---------------ISGE 423
+ V +E TG IK+ GE+++ + N++ + ++G
Sbjct: 331 GANVRRVEQQTGARIKVQEIDKDASGERLI-IVSSNEIPTEPISPTIEALILLHDKVAGP 389
Query: 424 YKNVQNALSEVVGRLR-HNLKSGEILNEARPRSPS 457
+ AL+E+ RLR L+ N P +PS
Sbjct: 390 PAIARGALTEIASRLRTRTLRDTSTANNPPPFAPS 424
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 30/150 (20%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S R++C + ++G +IG+SG+ + + + T RI +V + S +R I+
Sbjct: 213 SIRILCASELIGSVIGKSGANVRRVEQQTGARI-----------KVQEIDKDASGERLII 261
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFER--MWEV-----------EAEVEGDGDGDDVAYCG 132
N++ E +S T EA+I + ++ M EV E V +GD C
Sbjct: 262 VSSNEIPTE--PISPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSIRILCA 319
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKI 162
+ IG V+GK G NV R+ ++GA+I
Sbjct: 320 ----SELIGSVIGKSGANVRRVEQQTGARI 345
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 173/435 (39%), Gaps = 80/435 (18%)
Query: 3 HHSNPYGYS--SKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC 60
H S G+S S + ++ P R++ PT VG +IG+ G I +I + T+ R+
Sbjct: 106 HSSREQGHSGSSSQTRQIDFP-----LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI 160
Query: 61 EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVE 120
HR SG+ ++ + EG T EA + E M + E E
Sbjct: 161 --------HRK---ENSGAAEKPVTI---HATPEG-----TSEACRMILEIM---QKEAE 198
Query: 121 GDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQI 180
++V +LA+ +G ++GK GRN+ ++ E+G KI + +++ D I
Sbjct: 199 DTKLAEEVP-LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITI------SSLQDLSIYN 251
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL 240
T+ VK + A + M+K F + V + H +FP++
Sbjct: 252 PERTITVKGTIDACANA--EMEIMKKLREAFENDMLAV------NSHSGYFPNM------ 297
Query: 241 TGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQ 300
H +P ++ + + IIGK+GA ++ L
Sbjct: 298 -------YPHHHFGPFPHHHSYP--------EQETVNLFIPTQAVGAIIGKKGAHIKQLA 342
Query: 301 NASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSG 359
+GA I A A ER+V I+ + A +F + E + F+
Sbjct: 343 RFAGASIKIAPAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPK 393
Query: 360 ENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQ 419
E + I V + G + G G V+E++++T ++ +V +Q A +V+++
Sbjct: 394 EEV--KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPDENA--EVIVR 448
Query: 420 ISGEYKNVQNALSEV 434
I G + Q A ++
Sbjct: 449 IIGHFFASQTAQRKI 463
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 179/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 175 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 221
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I ST E + + E+ + D +
Sbjct: 222 ---KENAGAAEKSITIL------------STPEGTSAACKSILEIMHKEAQDIKFTEEIP 266
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 267 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 319
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 320 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 372
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 373 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 425
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 426 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 473
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 474 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 528
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 529 GHFYACQVAQRKIQEILTQVKQH 551
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 179/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 30 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 76
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I ST E + + E+ + D +
Sbjct: 77 ---KENAGAAEKSITIL------------STPEGTSAACKSILEIMHKEAQDIKFTEEIP 121
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 122 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 174
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 175 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 227
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 228 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 280
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 281 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 328
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 329 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 383
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 384 GHFYACQVAQRKIQEILTQVKQH 406
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENTGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEYKNVQNA---LSEVVGRLRHN 441
G + Q A + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|198425067|ref|XP_002127946.1| PREDICTED: similar to insulin-like growth factor 2 mRNA binding
protein 1 [Ciona intestinalis]
Length = 601
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 182/444 (40%), Gaps = 61/444 (13%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRVILVV 75
P N+PD + R++ P+ VG +IG+ G I +I + T RI PG+ + I +
Sbjct: 188 PKNIPD--LPTRMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDNPGATEKAITIN 245
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLA 135
G+ C G V + + ++R +R A G + DD+ +LA
Sbjct: 246 GTPEA------C-------GAAVGAILD-IVRDEDRNARQAA---GTWNDDDIP-LKILA 287
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKAL 191
+ + IG ++GK GRN+ ++ + KI M C A ++ I I G +A
Sbjct: 288 HNSLIGRLIGKEGRNLKAIQEKVETKIAISNSMADMQQCNA--ERTIAIYGDNDRCAEAE 345
Query: 192 VAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE---FFPHLSLVPPLTGNPSD-N 247
V + MEK C+ E PH+ F LS+ L G
Sbjct: 346 VLL---------MEKLRSCY----ENDMMIAQQQPHQYPGINFNQLSMFGGLQGGYGHPG 392
Query: 248 ASEFHSSSADADRDHPGLDKKGRKQEVALRMLF-SGWTASGIIGKRGAIVRSLQNASGAL 306
E+ + + G + R Q L+ + +IG +G+ +R++ + A
Sbjct: 393 MREYGMNYQGQNFRGQGYNGDQRAQMSETCTLYIPAESVGAMIGSKGSHIRNISRIANAS 452
Query: 307 ISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
I P E+ ++ + + + + +F + Q+GF + E+ + +
Sbjct: 453 IKIVPPEDGDDEKQRRVTIMGSPEGQWK----SQFCIFDKL----KQEGFFNAED--ERL 502
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY-- 424
+ + A VG + G G + V E++ +T +++ + + G +V ++I G +
Sbjct: 503 TSEMTIPAAIVGRVIGKGGNNVRELQRLTSSEVVIPRQSETEGL---EEVPVKICGNFFA 559
Query: 425 -KNVQNALSEVVGRLRHNLKSGEI 447
++ Q + E++ + R + G++
Sbjct: 560 NQSAQRKIREMLMKSREAERIGKM 583
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 187/455 (41%), Gaps = 74/455 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ ++ HR +G+ ++ I
Sbjct: 46 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDI--------HRK---ENAGAAEKPIT- 93
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+ ST E + ++ + D + +LA+ + +G ++GK
Sbjct: 94 -----------IHSTPEGCSTACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGK 142
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ ++ KI + +++ D I T+ VK ++ A C + M+K
Sbjct: 143 EGRNLKKIEEDTETKITI------SSLQDLTIYNPERTIIVKGSIEAC--CRAEVEIMKK 194
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTGN------PSDNASEF--H 252
+ + + ++ P F LS++PP G P + F H
Sbjct: 195 LREAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGH 254
Query: 253 SSSADADRDHP---GLDK---KGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGA 305
SS P G+ + +QEV LF A G IIGK+G ++ L +GA
Sbjct: 255 SSQLGGLYGVPPASGISHQHTQAPEQEVVY--LFIPTQAVGAIIGKKGQHIKQLARFAGA 312
Query: 306 LISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
I A A +R+V I+ + A +F + E + F++ E
Sbjct: 313 SIKIAPAESPDVTQRMVIITGPPEAQFK------AQGRIFGKLKE---ENFFTAKEEV-- 361
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGE 423
+ I V + G + G G V+E++++T ++ +V +Q +ND V ++ISG
Sbjct: 362 KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ---TPDENDEVFVKISGH 417
Query: 424 Y---KNVQNALSEVVGRLRHNLKSGEILNEARPRS 455
+ + Q + E++ +++ + + PRS
Sbjct: 418 FFASQTAQRKIREIIQQVKQQEQKHQQGAPTTPRS 452
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
D D+ + + +R++ G IIGK+G IV+ + SGA I+ + E
Sbjct: 2 DMDNKNMINDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPE 59
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVG 378
R+VT++ + + A L+ + E + SG + + + ++V A G
Sbjct: 60 RIVTVTG------STNAIFKAFTLICKKFEEFQDINSGGSGVPR-PPITLRLIVPASQCG 112
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
L G G S + E+ +VTG I++ ++L + + V I +GE + + + +
Sbjct: 113 SLIGKGGSKIKEIREVTGASIQV--ASEMLPNSTERAVTISGTGEA--ITQCIYHICTVM 168
Query: 439 RHNLKSGEILNEARPRSPSGRVGGPAL 465
+ G + P P +VGGP +
Sbjct: 169 LESPPKGATI----PYRPKPQVGGPVI 191
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 182/443 (41%), Gaps = 77/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SISKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ + + +P ++ + V L + IIGK+G ++ L +GA
Sbjct: 385 PTSGPPSAMTP----PYPQFEQAPETETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGA 438
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 439 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 486
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 487 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 541
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 542 GHFYACQVAQRKIQEILTQVKQH 564
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS 77
N+ V+ RLV P G LIG++G+ I IR T ++ G P S R + V G
Sbjct: 96 NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG- 154
Query: 78 GSIDRRIMFCEND---VVVEG----GEVSSTQEAVIRVFERM------WEVEAEVEGDGD 124
+ I+ C V++EG G+ + A + +++ + + V G
Sbjct: 155 --VPDAIILCVRQICAVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDP 212
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGAT 184
+ L IG V+G+ G ++ +R SGA I + ++ + ITG+
Sbjct: 213 STQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI--GNQAEGAGERHVTITGSP 270
Query: 185 LAVKKALVAVTTCLQ 199
+++ A +T CL+
Sbjct: 271 VSIALAQYLITACLE 285
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 41/191 (21%)
Query: 246 DNASEFHSSSADA---DRD---HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL 299
A+ FH+ S A D D P + V LR++ +IGK G ++ +
Sbjct: 68 STAAVFHAVSMIAFKLDEDLCAAPANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI 127
Query: 300 QNASGALISFAAP-LTKSGERVVTISALE---YLDTRHSPVQNAAVLVFARSVEVEGQQG 355
+ +GA + A L S ER VT+S + L R Q AV++ V+GQ G
Sbjct: 128 RETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVR----QICAVIL--EGFSVQGQYG 181
Query: 356 FSS-------GENKGDAVAVS------------------ILVGADFVGCLTGSGSSAVSE 390
+ + G AV + LV D +GC+ G S +SE
Sbjct: 182 AVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISE 241
Query: 391 MEDVTGTDIKL 401
+ ++G IK+
Sbjct: 242 IRQMSGAHIKI 252
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 179/440 (40%), Gaps = 78/440 (17%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I + ST E + + E+ + D + +
Sbjct: 234 KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG---N 332
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPSDNA 248
V TC + + K E S + H P L+ L PP +G P
Sbjct: 333 VETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP--- 384
Query: 249 SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
+S P + + + + + + IIGK+G ++ L +GA I
Sbjct: 385 ----PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIK 440
Query: 309 FA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 441 IAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEEVKL 488
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY 424
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+G +
Sbjct: 489 EA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKITGHF 543
Query: 425 ---KNVQNALSEVVGRLRHN 441
+ Q + E++ +++ +
Sbjct: 544 YACQVAQRKIQEILTQVKQH 563
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 41/311 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG++G ++++R +T R PG RV+ V G+
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTGA------- 97
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTTK 139
+S +A V + + E V G G + G LL + +
Sbjct: 98 -------------LSGISKAYHLVAKGLLEGAPSV---GMGGVINTSGTHPVRLLISHNQ 141
Query: 140 IGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAVT 195
+G ++G+ G + +++ SG ++V MLP +++++I G ++KA +
Sbjct: 142 MGTIIGRAGLKIKQIQDASGVRMVAQKEMLPQST-----ERIVEIQGTPEGIEKATWEIG 196
Query: 196 TCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP-SDNASEFHSS 254
CL + +N P +V + F + S GN SD+ + S
Sbjct: 197 KCLIDDHERGYGTVLYN-PAVRVQAGTTGPVTNGFTGNRSYNRTGHGNDFSDSPTYSRRS 255
Query: 255 SADADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFA-AP 312
+DA P +E+ + + G IIG+ G+ + ++ +SGA IS A AP
Sbjct: 256 GSDAASRPPMPTTTEDGEEIQTQNISIPSDMVGCIIGRGGSKISEIRKSSGARISIAKAP 315
Query: 313 LTKSGERVVTI 323
++GER+ TI
Sbjct: 316 HDETGERMFTI 326
>gi|350529341|ref|NP_001123831.2| KH-type splicing regulatory protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 81/182 (44%), Gaps = 21/182 (11%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IGR G I+ I++++ C++ G RV+ + GS ++ +D+
Sbjct: 101 PDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDDI 160
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
V G +Q + +G + + ++ K G+++GKGG +
Sbjct: 161 VARGRGGPPSQ----------------FHDNSNGQNGSLQEIMIPAGKAGLIIGKGGETI 204
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICF 211
+++ +G K++++ + D+ ++I G V++A V L+ E+ F
Sbjct: 205 KQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLR-----ERDQANF 259
Query: 212 NR 213
+R
Sbjct: 260 DR 261
>gi|41053065|dbj|BAD08009.1| putative KH domain protein [Oryza sativa Japonica Group]
Length = 458
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRVILVVGSGSIDRRIM 85
FRLV T VGGLIGR G I + DT+ R+ E + +R +V S S D
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANR---IVDSDSNDFIAK 155
Query: 86 FCENDVVVEGGEVSSTQ-----EAVIRVFERMWEVEAEVEGD----GDGDDVAYCGLLAN 136
V++ E S + +A I++F + ++E ++ D G + LL
Sbjct: 156 VTFEMVLISATEESQAELPPAMDAAIKIFMHINDIE-KINCDDTLSGSAPEKCSAKLLVP 214
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAA---IDDQLIQITGATLAVKKALVA 193
+ + ++GK G + ++ +GA + ++ + +D++++ I GA L V AL +
Sbjct: 215 SAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKS 274
Query: 194 VTTCLQHL 201
V L+
Sbjct: 275 VLGVLRKF 282
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 95/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEYKNVQNA---LSEVVGRLRHN 441
G + Q A + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 65
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 66 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 116
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 117 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 173
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 174 DPQSSSCLN-----ISYANVAGP 191
>gi|124808479|ref|XP_001348324.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
gi|23497216|gb|AAN36763.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRI 84
+L+ V G +IG+ GSII+SI T C + FP + RV++
Sbjct: 22 KLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLV----------- 70
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEV----EAEVEGDGDGDDVAYCGLLANTTKI 140
C G++ ++A++ + +++ EV E + +G C ++ + +
Sbjct: 71 -LC--------GKIDQIKDALLIILDKIKEVANQHSHEKQNMMNGAAKYTCRIVVPKSAV 121
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
++GKGG+ + +++ +G+KI + +++++I I G+ +++ + V +Q
Sbjct: 122 SAIIGKGGQQIKQLQDSTGSKIQI--SSREDGLNERIITIIGSFESIRDTALKVANSIQ 178
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTISALEY 328
Q +++L + A +IGK G+I+ S++N +G + + + + ERV+ +
Sbjct: 17 QLCFVKLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLVLCG--- 73
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE--NKGDAVAVSILVGADFVGCLTGSGSS 386
+ +++A +++ + EV Q N I+V V + G G
Sbjct: 74 ---KIDQIKDALLIILDKIKEVANQHSHEKQNMMNGAAKYTCRIVVPKSAVSAIIGKGGQ 130
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
+ +++D TG+ I++ E L N+ +I I G ++++++ +V ++ + +
Sbjct: 131 QIKQLQDSTGSKIQISSREDGL-----NERIITIIGSFESIRDTALKVANSIQKDPNLKD 185
Query: 447 ILN 449
+LN
Sbjct: 186 LLN 188
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 81/193 (41%), Gaps = 28/193 (14%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVI 72
GP + D+ +++ P+ G +IG+ G I+ ++RDT + +PG+ RV
Sbjct: 65 GPGPVDDNKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVA 124
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-----VEAEVEGDGDGDD 127
L+ G V S + V E++ E V+A E +
Sbjct: 125 LLT--------------------GPVESLNNVAVFVLEKIKESPQLGVKAGAETITSPER 164
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
++ + G+++GKGG + + +SG+++ + + +++I I+G
Sbjct: 165 ARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLSERVITISGEPENN 224
Query: 188 KKALVAVTTCLQH 200
+KA+ + +Q
Sbjct: 225 RKAMSFIVNKIQE 237
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA-----PLTKSGERVVTISA-LEYL 329
L+ML A IIGK G + LQ +G + + P T+ ERV ++ +E L
Sbjct: 76 LKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQ--ERVALLTGPVESL 133
Query: 330 DTRHSPVQNAAVLVFARSVEVEGQQGFSSGE----NKGDAVAVSILVGADFVGCLTGSGS 385
+ N AV V + ++ Q G +G + A V I+V G + G G
Sbjct: 134 N-------NVAVFVLEK-IKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKGG 185
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSG 445
+ + + + +G+ +++ Q ++ VI ISGE +N + A+S +V +++ + +SG
Sbjct: 186 AMIKSIMEQSGSRVQI---SQKSDGITLSERVITISGEPENNRKAMSFIVNKIQEDPQSG 242
Query: 446 EILN 449
N
Sbjct: 243 SCNN 246
>gi|322780737|gb|EFZ09994.1| hypothetical protein SINV_05815 [Solenopsis invicta]
Length = 483
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ G+
Sbjct: 11 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTV 70
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++S + E + +V+ +L +
Sbjct: 71 DAIMEVMEFIMDKIREKPDLTSKTTVDFDSGKATAERDKQVK------------ILVPNS 118
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ ESG+ + + ++ ++ I + G +AL + L
Sbjct: 119 TAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCITVIGEKENNHRALHMI---L 175
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ +S C N V Y++ S P + P
Sbjct: 176 AKVADDPQSGTCLN-----VSYADVSGPVANYNP 204
>gi|443720285|gb|ELU10083.1| hypothetical protein CAPTEDRAFT_219465 [Capitella teleta]
Length = 708
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+ S P +VG +IG+ G I++I+ +T C++ G R ++G+
Sbjct: 143 MTSEDYSVPDRMVGLIIGKGGEQIANIQSETGCKVQFAPDSAGMPDRPCQLMGTPQA--- 199
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ ++ + R+ ++ + D G D + K+G+V
Sbjct: 200 --------------IAEAKKTIERIIQKGQGLP-----DNFGGDQTMLEVFIPGNKVGLV 240
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+GKGG + ++ ++G K+VM+ + D+ ++ITG+ A +KA
Sbjct: 241 IGKGGETIKHLQEQAGVKMVMIQDSNLPSNQDKPLRITGSIQACQKA 287
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 118 EVEG-DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP---PACAAI 173
EV G D + + LL + +IG V+GKGG+ + +R ESGA+I +L P+C+
Sbjct: 271 EVHGEDSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLS 330
Query: 174 DDQLIQITGATLAVKKALVAVTTCLQ 199
++LIQI+ V+K L + + L
Sbjct: 331 SNELIQISREPFIVRKILYQIASRLH 356
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 338 NAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGT 397
A V++ EV G+ + + V V +LV ++ +GC+ G G + + +G
Sbjct: 260 TARVIIMDYPEEVHGEDS-----EEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGA 314
Query: 398 DIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
I+++ + + C+ ++ +IQIS E V+ L ++ RL N
Sbjct: 315 QIRILKDDHLPSCSLSSNELIQISREPFIVRKILYQIASRLHDN 358
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 171/431 (39%), Gaps = 73/431 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V RL+ PT VG +IG+ G+ I +I + T +I HR +G+ ++ I
Sbjct: 195 VPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDI--------HR---KENAGAAEKPI 243
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + E+ + D + +LA+ +G ++
Sbjct: 244 T------------VHSTPEGCSSACRNIMEIMQKEAIDTKITEEIPLKILAHNNFVGRLI 291
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + P + D + T+ VK L A + + M
Sbjct: 292 GKEGRNLKKIEQDTDTKITISP------LQDLTLYNPERTITVKGTLDACAKAEEEI--M 343
Query: 205 EKSPICFNRPIEKVFYSNSSDPHRE-----FFPHLS---LVPPLTGNPSDNASEFHSSSA 256
+K + + + ++ P FP + + P + P A
Sbjct: 344 KKVRESYENDVAAMHLQSNLIPGLNLNALGLFPGAASGGISPSVVSGPPPGA-------- 395
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGALISFA-APLT 314
G G + E LF A G IIGK+G ++ L +GA I A A
Sbjct: 396 -----QAGYQSFGAQMESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGI 450
Query: 315 KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGA 374
+ +R+V IS + A +F + E + F G + + I V +
Sbjct: 451 DAKQRMVIISGPPEAQFK------AQGRIFGKLKE----ENF-FGPKEEVKLEAHIKVPS 499
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNA 430
G + G G V+E++++T ++ +V +Q +ND VV++I+G + + Q
Sbjct: 500 FAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQ---TPDENDQVVVKITGHFYASQLAQRK 555
Query: 431 LSEVVGRLRHN 441
+ E++ ++R
Sbjct: 556 IQEIISQVRRQ 566
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 119/305 (39%), Gaps = 54/305 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S R+ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 104 SVSRQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 150
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 151 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 195
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 196 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 248
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
+V TC + + K E S + H P L+ L PP +G P
Sbjct: 249 --SVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 301
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 302 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPAPSVGAIIGKQGQHIKQLSRFAGA 354
Query: 306 LISFA 310
I A
Sbjct: 355 SIKIA 359
>gi|440901500|gb|ELR52431.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Bos grunniens
mutus]
Length = 600
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 121/305 (39%), Gaps = 53/305 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ + + +P +++ + V L + IIGK+G ++ L +GA
Sbjct: 385 PTSGPPSAITP----PYPQFEQQSETETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGA 438
Query: 306 LISFA 310
I A
Sbjct: 439 SIKIA 443
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 180/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SISKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG-SIDR 82
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+ +++
Sbjct: 119 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 178
Query: 83 RIMFCENDVVVEGGEV--SSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
F V E+ + T+ V+ + + + + D L+ +
Sbjct: 179 AHSFIAEKV----REIPQAMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTA 226
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G+++GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q
Sbjct: 227 GLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQK 283
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDP 226
+ +S C N + Y+N + P
Sbjct: 284 VQEDPQSSSCLN-----ISYANVAGP 304
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 9/187 (4%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTIS- 324
G + E L++L + A IIGK G + LQ +GA I + + ERV +
Sbjct: 112 GEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 171
Query: 325 ALEYLDTRHSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
E L+ HS + + EV + N A ++V G + G
Sbjct: 172 TAEALNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIG 231
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G + V + + +G ++L ++ G Q VV +SGE + V A+S +V +++ +
Sbjct: 232 KGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQKVQEDP 288
Query: 443 KSGEILN 449
+S LN
Sbjct: 289 QSSSCLN 295
>gi|68071447|ref|XP_677637.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497827|emb|CAH98378.1| conserved hypothetical protein [Plasmodium berghei]
Length = 337
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTISALEY 328
Q ++ML + A IIGK G I+ ++N +G + + + + +RV+ I
Sbjct: 17 QLCFVKMLINNLLAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKRVLVICG--- 73
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
+ + N +++ + ++ + ENK I+V V + G G +
Sbjct: 74 ---KQEQINNVIIIILDKIRQISLPN--NKSENKIQTYTCRIVVPKSAVSAIIGKGGYQI 128
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEIL 448
+++++TGT I++ E L + +I I G ++++++ ++V+ ++ + ++L
Sbjct: 129 KQLQNITGTKIQISNREYGLY-----ERIITIVGPFESIKDTATKVIASIQTDPNLKDLL 183
Query: 449 N 449
N
Sbjct: 184 N 184
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 125/309 (40%), Gaps = 48/309 (15%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRI 84
+++ + G +IG++G IIS I T C + FP + RV+++
Sbjct: 22 KMLINNLLAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKRVLVI---------- 71
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
C G+ +I + +++ ++ + C ++ + + ++
Sbjct: 72 --C--------GKQEQINNVIIIILDKIRQISLPNNKSENKIQTYTCRIVVPKSAVSAII 121
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GKGG + +++ +G KI + + +++I I G ++K V +Q +
Sbjct: 122 GKGGYQIKQLQNITGTKIQI--SNREYGLYERIITIVGPFESIKDTATKVIASIQTDPNL 179
Query: 205 EK-SPICFNRP--IEKVFYSNSSDPHR----EFFPHLSLVPPLTGNPSDNASEFHSSSAD 257
+ + +N+ IE + SN+ + R F H+ + + P H D
Sbjct: 180 KDLLNVNYNKELNIETITKSNNRNDIRNMSHNFINHVHMGRYII--PQQYGVFRHEQYVD 237
Query: 258 AD------RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
A+ R++ L + + + F G +IGK GA + ++ N++GA I
Sbjct: 238 ANMMNYLMRNNRDLFNLPCEIFIEIPDEFIG----SVIGKNGARLTNIMNSTGAQIK--- 290
Query: 312 PLTKSGERV 320
+++ GE V
Sbjct: 291 -ISRKGELV 298
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV L+ G+
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 124
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + E V + + V + D V ++ + G++
Sbjct: 125 VHNFIAEKVREMPQSAQKPEPV-SILQPQTTV--------NPDRVKQAKIIVPNSTAGLI 175
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ I+G +K AV +Q +
Sbjct: 176 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRK---AVEIIVQKIQE 232
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+S C N + YSN S P P TG+P N ++
Sbjct: 233 DPQSSSCLN-----ISYSNVSGPVANSNP--------TGSPYANTAD 266
>gi|198433420|ref|XP_002121389.1| PREDICTED: similar to neuro-oncological ventral antigen 1 [Ciona
intestinalis]
Length = 543
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGS 77
P + +++ P G +IG+ G II +++D+ I +PG+ RV+L+ G+
Sbjct: 43 PPGQLILKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDRVVLIQGT 102
Query: 78 GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
+M +N ++ + E ++ + +R +V+ ++ NT
Sbjct: 103 A---EGLMKVQNTIIEKVYEFPVPKDLAAIIGDRPKQVKI---------------IVPNT 144
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG 182
T G+V+GK G + + ESG+K+ + P + +++I I G
Sbjct: 145 TA-GLVIGKAGATIKTIMEESGSKVQLSQKPDGVNVQERVITIKG 188
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 176/435 (40%), Gaps = 65/435 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 649 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 697
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 698 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 745
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V K V C + + M+K
Sbjct: 746 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITV-KGTVEACACAE-IEIMKK 797
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 798 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 857
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 858 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 917
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 918 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 966
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KN 426
I V + G + G G V+E++++T ++ +V +Q +V+++I G + +
Sbjct: 967 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 1023
Query: 427 VQNALSEVVGRLRHN 441
Q + E+V +++H
Sbjct: 1024 AQRKIREIVQQVKHQ 1038
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRALDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ LL +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDMDGNSTIQE-LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 16/225 (7%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VVG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 RIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGA--TLAVKKALVAVTTCLQHLS 202
KGG N+ + +SGA + + PP + ++ I GA + V + L+ L
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLIDEKVGGASLG 431
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFP---HLSLVPPLTGNP 244
+P F + F + PH+ FP ++ + GNP
Sbjct: 432 ----APAAFG---QSPFSQPPAAPHQNTFPPRGFPNIAAKVNGNP 469
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G + V +R L A IIGK G+ + SL+ A IS P ER+++I A
Sbjct: 33 GGGRAVDVRFLLQSRNAGAIIGKGGSNINSLRKEFKASIS--VPDCPGPERILSIVA--D 88
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
LDT + N + RS++ +G+N G + +L+ GC+ G +
Sbjct: 89 LDTLGEILLNIIPKLDDRSMQFAQH----TGQNGGSESEMRLLMHQSHAGCIIGRAGCRI 144
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVV 435
E+ + TG +IK+ G C + +++++G V + + ++
Sbjct: 145 KELRESTGANIKVHGS----CCPGSTERIVKVTGSPSVVVDCIKQIC 187
>gi|327264009|ref|XP_003216809.1| PREDICTED: far upstream element-binding protein 2-like [Anolis
carolinensis]
Length = 699
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 23/188 (12%)
Query: 16 GPLNLPD-DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRV 71
GP++ P V+ P +VG +IGR G I+ I++D+ C++ GG P R
Sbjct: 126 GPIHPPPRSTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERS 182
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYC 131
+ + GS ++ +D+V G +Q + +G +
Sbjct: 183 VSLTGSPESVQKAKMMLDDIVSRGRGGPPSQ----------------FHDNSNGQNGTVQ 226
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL 191
++ K G+V+GKGG + +++ +G K++++ + D+ ++I G V++A
Sbjct: 227 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQAC 286
Query: 192 VAVTTCLQ 199
V L+
Sbjct: 287 EMVMDILR 294
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 102
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 103 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 153
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 154 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 210
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 211 DPQSSSCLN-----ISYANVAGP 228
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVT 322
D+ G + E L++L + A IIGK G + LQ +GA I + + ERV
Sbjct: 33 DRDGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCL 92
Query: 323 ISAL-EYLDTRHSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGC 379
+ E L+ HS + + EV + N A ++V G
Sbjct: 93 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 152
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+ G G + V + + +G ++L ++ G Q VV +SGE + V A+S +V +++
Sbjct: 153 IIGKGGATVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQKVQ 209
Query: 440 HNLKSGEILN 449
+ +S LN
Sbjct: 210 EDPQSSSCLN 219
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRALDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ LL +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDMDGNSTIQ-ELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 16/225 (7%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VVG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 PIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGA--TLAVKKALVAVTTCLQHLS 202
KGG N+ + +SGA + + PP + ++ I GA + V + L+ L
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLIDEKVGGASLG 431
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFP---HLSLVPPLTGNP 244
+P F + F + PH+ FP ++ + GNP
Sbjct: 432 ----APAAFG---QSPFSQPPAAPHQNTFPPRGFPNIAAKVNGNP 469
>gi|431908994|gb|ELK12585.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Pteropus
alecto]
Length = 613
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 119/299 (39%), Gaps = 53/299 (17%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 193 PCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR---KEN 236
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
+G+ ++ I + ST E + + E+ + D + +LA+
Sbjct: 237 AGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIPLKILAH 284
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
+G ++GK GRN+ ++ ++ KI + P + + + T+ VK +V T
Sbjct: 285 NNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG---SVET 335
Query: 197 CLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPSDNASEF 251
C + + K E S + H P L+ L PP +G P +
Sbjct: 336 CAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPPPTSGPP 390
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ + +P +++ + V L + IIGK+G ++ L +GA I A
Sbjct: 391 SAMTP----PYPQFEQQSETETVHL--FIPALSVGAIIGKQGQHIKQLSRFAGASIKIA 443
>gi|224008600|ref|XP_002293259.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971385|gb|EED89720.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 296
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDR 82
+ +L+ G +IGRSG IS ++ D+ RI G +PG+ RV L+ GS
Sbjct: 2 AIKLLVSNNSSGCIIGRSGKTISELQADSSTRIKLSQGGDYYPGTQDRVCLIQGS----- 56
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
+ + + AV + ++ +VE+ V G +L T G+
Sbjct: 57 ---------------LDNARVAVEMILLKLLQVESIVNEFGSVAMPFTIQVLVPTPSCGM 101
Query: 143 VVGKGGRNVTRMRIESGAKIVML 165
++G+GG N+ ++ ESG + L
Sbjct: 102 LIGRGGSNIKSIKEESGVSFIQL 124
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 179/443 (40%), Gaps = 78/443 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHQFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 438 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 485
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQIS 421
A I V + G + G G V+E+++++ ++ +V +Q +ND VV++I+
Sbjct: 486 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQ---TPDENDQVVVKIT 540
Query: 422 GEY---KNVQNALSEVVGRLRHN 441
G + + Q + E++ +++ +
Sbjct: 541 GHFYACQVAQRKIQEILTQVKQH 563
>gi|160333253|ref|NP_001103813.1| P-element somatic inhibitor [Bombyx mori]
gi|159031799|dbj|BAF91871.1| Bombyx homolog of P-element somatic inhibitor [Bombyx mori]
Length = 703
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 16 GPLNL-PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV 74
GP NL PD ++ + P +VG +IGR G I+ ++ ++ C+I G+ R+ +
Sbjct: 92 GPTNLLPDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTL 151
Query: 75 VGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLL 134
GS +R N +V G ++ Q + E + G A ++
Sbjct: 152 TGSRDAIQRAKELVNQIVNHRGRENAPQ------HQDPSEPGMNMSRPGPN---AMEEIM 202
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKAL 191
K+G+++GK G+ + +++ ++GAK+V++ P ++ ++I+G V+ A
Sbjct: 203 IPGAKVGLIIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDPAKVEHAK 262
Query: 192 VAVTTCLQHLSTMEKSPICFN 212
V L + M++ P ++
Sbjct: 263 QLVFELLAN-KDMQEPPRPYD 282
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 71/166 (42%), Gaps = 23/166 (13%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
+R+L S +A IIGK G ++ L+ A + P + + ERV T++A E
Sbjct: 35 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQ--VPDSNTPERVCTVTADE-------- 84
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
VL + V + FS + D V +LV G L G S + E+ +
Sbjct: 85 ---KTVLNILKDVLPRLEDNFS----ERDPCEVRMLVHQSHAGALIGRNGSKIKELREKC 137
Query: 396 GTDIKLVGGEQVLGCA-AQNDVVIQISGEYKNVQNALSEVVGRLRH 440
+K+ GCA D V+ SGE KNV + EV+ L+
Sbjct: 138 SARLKIF-----TGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKE 178
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 107/235 (45%), Gaps = 28/235 (11%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVV 75
++ D +++ P+ G +IG+ G I ++++T I +PG+ RV LV
Sbjct: 64 DMEDGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 123
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLA 135
G+ + ++ + E +V ++V++ E + ++ + + D A ++
Sbjct: 124 GTA----EALNAVHNFIAE--KVREIPQSVVKP-ESVNILQPQTTMNPDRAKQAKV-IVP 175
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVT 195
N+T G+++GKGG V + +SGA + + P + ++++ I+G + K AV
Sbjct: 176 NSTA-GLIIGKGGATVKAIMEQSGAWVQLSQKPEGINLQERVVTISGEPEQIHK---AVD 231
Query: 196 TCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+Q + +S C N + Y+N + P P TG+P N+++
Sbjct: 232 IIVQKIQEDPQSSSCLN-----ISYANITGPVANSNP--------TGSPYANSTD 273
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRALDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ LL +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDMDGNSTIQ-ELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 16/225 (7%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VVG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 RIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGA--TLAVKKALVAVTTCLQHLS 202
KGG N+ + +SGA + + PP + ++ I GA + V + L+ L
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQMEVARHLIDEKVGGASLG 431
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFP---HLSLVPPLTGNP 244
+P F + F + PH+ FP ++ + GNP
Sbjct: 432 ----APAAFG---QSPFSQPPAAPHQNTFPPRGFPNIAAKVNGNP 469
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 187/455 (41%), Gaps = 74/455 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ ++ HR +G+ ++ I
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDI--------HRK---ENAGAAEKPIT- 247
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+ ST E + ++ + D + +LA+ + +G ++GK
Sbjct: 248 -----------IHSTPEGCSTACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGK 296
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ ++ KI + +++ D I T+ VK ++ A C + M+K
Sbjct: 297 EGRNLKKIEEDTETKITI------SSLQDLTIYNPERTIIVKGSIEAC--CRAEVEIMKK 348
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTGN------PSDNASEF--H 252
+ + + ++ P F LS++PP G P + F H
Sbjct: 349 LREAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGH 408
Query: 253 SSSADADRDHP---GLDK---KGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGA 305
SS P G+ + +QEV LF A G IIGK+G ++ L +GA
Sbjct: 409 SSQLGGLYGVPPASGISHQHTQAPEQEVV--YLFIPTQAVGAIIGKKGQHIKQLARFAGA 466
Query: 306 LISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
I A A +R+V I+ + A +F + E + F++ E
Sbjct: 467 SIKIAPAESPDVTQRMVIITGPPEAQFK------AQGRIFGKLKE---ENFFTAKEEV-- 515
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGE 423
+ I V + G + G G V+E++++T ++ +V +Q +ND V ++ISG
Sbjct: 516 KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ---TPDENDEVFVKISGH 571
Query: 424 Y---KNVQNALSEVVGRLRHNLKSGEILNEARPRS 455
+ + Q + E++ +++ + + PRS
Sbjct: 572 FFASQTAQRKIREIIQQVKQQEQKHQQGAPTTPRS 606
>gi|86129564|ref|NP_001034426.1| far upstream element-binding protein 3 [Rattus norvegicus]
gi|75270299|gb|ABA18725.1| MAP2 RNA trans-acting protein 2 [Rattus norvegicus]
Length = 569
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ LL +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQ-ELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 12/223 (5%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VVG +IGR+G +I I+ T RI + S R V+G +
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNGTGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + V G ++ Y K G+V+G
Sbjct: 315 RIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
KGG N+ + +SGA + + PP + ++ I GA ++ A + + S
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARHLIDEKVGGASL- 430
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFP---HLSLVPPLTGNP 244
+P F + F + PH+ FP ++ + GNP
Sbjct: 431 -GAPTAFG---QSPFSQPPAAPHQNTFPPRAFPNIAAKVNGNP 469
>gi|47085903|ref|NP_998309.1| far upstream element-binding protein 1 [Danio rerio]
gi|40555849|gb|AAH64649.1| Far upstream element (FUSE) binding protein 1 [Danio rerio]
Length = 642
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 29/196 (14%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVI 72
G + P VS P +VG +IGR G IS +++++ C+I GG P D V
Sbjct: 81 GGMGGPPRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMP--DRSVT 138
Query: 73 LVVGSGSIDRRIMFCEN--DVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
L +GS D IM + +VE G S F DG ++
Sbjct: 139 L---TGSPDA-IMTAKRLLSEIVEKGRPSP-------AFHH-----------NDGPGMSV 176
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ +K G+V+GKGG + +++ +G K+VM+ D+ ++I+G V++A
Sbjct: 177 HEMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQA 236
Query: 191 LVAVTTCLQHLSTMEK 206
V ++ E+
Sbjct: 237 KDMVMDLIRDQGFREQ 252
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT ++ +PG+ RV L+ GS
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSL 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++ + E + +V+ +L +
Sbjct: 102 EAIMAVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ ESG+ + + ++ ++ I + G + AL+ + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQERCITVIGEKENNRNALMMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ +S IC N V Y++ S P + P
Sbjct: 207 AKVADDPQSGICPN-----VSYADVSGPVANYNP 235
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 187/455 (41%), Gaps = 74/455 (16%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ ++ HR +G+ ++ I
Sbjct: 200 LRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDI--------HRK---ENAGAAEKPIT- 247
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+ ST E + ++ + D + +LA+ + +G ++GK
Sbjct: 248 -----------IHSTPEGCSTACHMIMDIMQKEAVDTKVTEDIPLKILAHNSLVGRLIGK 296
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ ++ KI + +++ D I T+ VK ++ A C + M+K
Sbjct: 297 EGRNLKKIEEDTETKITI------SSLQDLTIYNPERTIIVKGSIEAC--CRAEVEIMKK 348
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTGN------PSDNASEF--H 252
+ + + ++ P F LS++PP G P + F H
Sbjct: 349 LREAYENDVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGH 408
Query: 253 SSSADADRDHP---GLDK---KGRKQEVALRMLFSGWTASG-IIGKRGAIVRSLQNASGA 305
SS P G+ + +QEV LF A G IIGK+G ++ L +GA
Sbjct: 409 SSQLGGLYGVPPASGISHQHTQAPEQEVV--YLFIPTQAVGAIIGKKGQHIKQLARFAGA 466
Query: 306 LISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
I A A +R+V I+ + A +F + E + F++ E
Sbjct: 467 SIKIAPAESPDVTQRMVIITGPPEAQFK------AQGRIFGKLKE---ENFFTAKEEV-- 515
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGE 423
+ I V + G + G G V+E++++T ++ +V +Q +ND V ++ISG
Sbjct: 516 KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQ---TPDENDEVFVKISGH 571
Query: 424 Y---KNVQNALSEVVGRLRHNLKSGEILNEARPRS 455
+ + Q + E++ +++ + + PRS
Sbjct: 572 FFASQTAQRKIREIIQQVKQQEQKHQQGAPTTPRS 606
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 102/476 (21%), Positives = 188/476 (39%), Gaps = 98/476 (20%)
Query: 9 GYSSKRRGP----------LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI 58
G+SS+ RG L+ P R++ PT VG +IG+ G I ++ + T+ ++
Sbjct: 96 GHSSRERGSSPGGSWQPKQLDFP-----LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKV 150
Query: 59 HCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE 118
HR +G+ ++ I EG EA + + M + E
Sbjct: 151 DI--------HRK---ENAGAAEKPITI---HATPEG-----CSEACRMILDIM---QKE 188
Query: 119 VEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQL 177
+ ++V +LA+ + +G ++GK GRN+ ++ ++G KI + P + ++
Sbjct: 189 ADETKSAEEVP-LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERT 247
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV 237
I + G+T A A V + L+ E + N+ + N S F LS++
Sbjct: 248 ITVKGSTEACSNAEVEIMKKLR--EAYENDVVAVNQQANLIPGLNLSALGI-FSTGLSML 304
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRK-------------------------- 271
P G +A A HP + GR+
Sbjct: 305 PSTPGA---------RGAAAATPYHPFAQQSGRRRTGSSAYLSSLYGAPPAGAFPHQHPL 355
Query: 272 --QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISALEY 328
QEV + + IIGK+G ++ L +GA I A A + ER+V I+
Sbjct: 356 PEQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPE 414
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
+ A +F + E + F+ E + I V + G + G G V
Sbjct: 415 AQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIKVPSFAAGRVIGKGGKTV 463
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KNVQNALSEVVGRLRHN 441
+E++++T ++ +V +Q +VV++I G + + Q + E+V +++
Sbjct: 464 NELQNLTSAEV-IVPRDQT--PDENEEVVVKIIGHFFASQTAQRKIREIVQQVKQQ 516
>gi|348570404|ref|XP_003470987.1| PREDICTED: far upstream element-binding protein 3-like [Cavia
porcellus]
Length = 605
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSG-SID--RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE 114
I G R ++ G+ SI+ +R++ D G S E V E
Sbjct: 111 IQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHSDAEGNSTVQE---- 166
Query: 115 VEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID 174
+L +K+G+V+GKGG + +++ +G K+VM+
Sbjct: 167 ------------------ILIPASKVGLVIGKGGETIKQLQERAGVKMVMIQDGPLPTGT 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HIINELILTAQERDGFGSLAVARGRGRGRGDWNVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPPA 169
KGG N+ + +SGA + + PPP+
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPS 397
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 52 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 111
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 112 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 148
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +DV LL +K+G+V+GKGG + +++ +G K+VM+ P P
Sbjct: 149 CRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTG 208
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 209 A---DKPLRITGDPFKVQQA 225
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 256 SLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 315
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 316 HVINELILTAQERDGFGGLAVARGRGRGRGDWSVGTPGGVQEITYT---VPADKCGLVIG 372
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 373 KGGENIKSINQQSGAHVELQRNPPP 397
>gi|363755730|ref|XP_003648080.1| hypothetical protein Ecym_7443 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892116|gb|AET41263.1| hypothetical protein Ecym_7443 [Eremothecium cymbalariae
DBVPG#7215]
Length = 342
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
++G GG + +R +G KI + P + D+L+++TG+ +V +L + L +
Sbjct: 73 IIGPGGNTINNIRTANGVKIGISPKEKSCS--DRLLEVTGSITSVANSLADLVKVLTDDA 130
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV-PPLTGNPSDNASEFHSSSADADRD 261
T E C S+ + F HL+ + PP PS + E
Sbjct: 131 TEED---C-----------GESEQEQHVFKHLNFILPP----PSLDEIE----------- 161
Query: 262 HPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSL-QNASGALISFAAPLTKSGERV 320
D + KQ LR++ + S IIG +G ++ L + S L+ L S +R+
Sbjct: 162 ----DPEKLKQIGNLRLIVTNSQVSSIIGTQGTKIKKLIETHSVKLVVSKTFLPDSQDRI 217
Query: 321 VTISALEYLDTRHSPVQNA-AVLVFARSVEVEGQQGFSSGENKGDA-VAVSILVGADFVG 378
+ I + ++ + +++ L+ ++ + ++ + ++ D V ++ + A+FVG
Sbjct: 218 LEIQG--FPNSIANCIKDINKTLINDEVLDTKEKRYYPHSKHSKDIHVTATVGIPAEFVG 275
Query: 379 CLTGSGSSAVSEMEDVTGTDI 399
L G G + ++ + T T I
Sbjct: 276 ALLGHGGNRIANLRKYTRTKI 296
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ LL +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQ-ELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HIINELILTAQERDGLGGLAVARGRGRGRGDWSVGTPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 76/193 (39%), Gaps = 8/193 (4%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
RML +IG G +R L + A + + ER V I A E D P
Sbjct: 61 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 120
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
+A + V+ + +G + V IL ++ L G S ++ ++ +
Sbjct: 121 AIDALLRVYECIINDDGLDV-----RYNNIVVARILTPSEQAASLIGDQGSVINYIKKAS 175
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRS 455
T+I ++ G+ + A ++D++I+I G V AL V LR L ++ P
Sbjct: 176 KTNIHVIDGD-LPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHRSVIPLFDPHV 234
Query: 456 --PSGRVGGPALH 466
P V P H
Sbjct: 235 SIPISPVDMPPFH 247
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 33/182 (18%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IG SG + + +TK + GG + R +++ D
Sbjct: 61 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDE---- 116
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY-----CGLLANTTKIG 141
+A++RV+E + + DG DV Y +L + +
Sbjct: 117 ----------PKPPAIDALLRVYECI--------INDDGLDVRYNNIVVARILTPSEQAA 158
Query: 142 VVVGKGGRNVTRMRIESGAKIVM----LPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
++G G + ++ S I + LPP A DD +I+I G V +AL V
Sbjct: 159 SLIGDQGSVINYIKKASKTNIHVIDGDLPP--VALEDDMIIEIWGLPARVHQALELVACH 216
Query: 198 LQ 199
L+
Sbjct: 217 LR 218
>gi|189239335|ref|XP_973573.2| PREDICTED: similar to pasilla CG16765-PK [Tribolium castaneum]
Length = 535
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 110/246 (44%), Gaps = 46/246 (18%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D F+++ P+ G +IG+ G I+ ++++T R+ +PG+ RV L+ +G
Sbjct: 42 DGTYHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLI--TG 99
Query: 79 SIDRRIMFCE--NDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
S+D ++ + D + E +++ + + E E+++ D D +L
Sbjct: 100 SVDAIMVVADFIADKIREKPDLT----------KPLVETESKLMQDRD----KQVKILVP 145
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
+ G+++GK G + +++ SG+ + + ++ ++ I + G ++A
Sbjct: 146 NSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVSLQERCITVIGEKEQNRQA------ 199
Query: 197 CLQHLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP---SDNASE 250
C L+ + + P C N V Y++ + P + P TG+P + S
Sbjct: 200 CQMILAKIVEDPQSGTCLN-----VSYADVNGPVANYNP--------TGSPFAQQNAGSA 246
Query: 251 FHSSSA 256
F++S+A
Sbjct: 247 FNASTA 252
>gi|149039051|gb|EDL93271.1| rCG45587 [Rattus norvegicus]
Length = 569
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ LL +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQ-ELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 12/223 (5%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VVG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + V G ++ Y K G+V+G
Sbjct: 315 RIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
KGG N+ + +SGA + + PP + ++ I GA ++ A + + S
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGAPQQIEVARHLIDEKVGGASL- 430
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFP---HLSLVPPLTGNP 244
+P F + F + PH+ FP ++ + GNP
Sbjct: 431 -GAPTAFG---QSPFSQPPAAPHQNTFPPRAFPNIAAKVNGNP 469
>gi|157108094|ref|XP_001650073.1| heterogeneous nuclear ribonucleoprotein k [Aedes aegypti]
gi|108868581|gb|EAT32806.1| AAEL014959-PA [Aedes aegypti]
Length = 430
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 26/192 (13%)
Query: 247 NASEFHSSSADAD-RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
++ + H S +AD D ++K+ RK E +R+L A IIGK G ++ L+ A
Sbjct: 10 DSDQHHDGSDNADTSDKKPMNKRSRKDEEEVRLLIPSKMAGAIIGKAGHNIQKLRTEYQA 69
Query: 306 LISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA 365
++ ERV+TI ++T + V++ + +GEN+
Sbjct: 70 QVNVGD--CTGPERVLTIGG--DMETITNVVKDVMKHL------------DKAGENE--- 110
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN-DVVIQISGEY 424
+ ILV GC+ G G + + E++D G +K+ A Q+ D + Q+ G
Sbjct: 111 YELRILVHQSLAGCVIGRGGTKIKELKDQIGCRLKIFS-----NIAPQSTDRIAQVIGTE 165
Query: 425 KNVQNALSEVVG 436
AL++++G
Sbjct: 166 DQCLTALNDIIG 177
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTR 332
V ++ + IIGK+GA ++ +Q+ASGA ++ + L S ERV++++ + D
Sbjct: 85 VTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVA--DAI 142
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENK----------------GDAVAVSILVGADF 376
H + ++ +E Q+ S N + I + D
Sbjct: 143 H------IATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDL 196
Query: 377 VGCLTGSGSSAVSEMEDVTGTDIKLV------GGEQVLGCAAQNDVVIQISGEYKNVQNA 430
VGC+ G G S ++E+ ++ + IK++ G +N+ ++ I+G+ N+Q A
Sbjct: 197 VGCIIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQPHNIQMA 256
Query: 431 LSEVVGR 437
+ + R
Sbjct: 257 VQLLYHR 263
>gi|391326103|ref|XP_003737564.1| PREDICTED: RNA-binding protein Nova-1-like [Metaseiulus
occidentalis]
Length = 430
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 32/231 (13%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
F+++ P G +IG+ G I+ +++D R+ +PG+ RV L+ G+ +
Sbjct: 27 FKILVPAVAAGAIIGKGGETIAQVQKDCGARVKMSKSNDFYPGTTERVCLITGTVEGIVK 86
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
I D + E + +S + V ++ E E +V+ +L + G++
Sbjct: 87 IHNFIMDKIKEKPDPNS-RTGVDFDHKQPAEREKQVK------------ILVPNSTAGMI 133
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ +S I + A+ ++ I I G +K AV L +
Sbjct: 134 IGKGGSYIKQIKEDSNVYIQLSQKSRDHALAERSITIIGELEPTRK---AVDLVLAKIVE 190
Query: 204 MEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSS 254
+S C N V Y+++ P F P TG+P N + S
Sbjct: 191 DPQSGSCLN-----VSYADAQGPVANFNP--------TGSPYANPTNLQHS 228
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT ++ +PG+ RV L+ GS
Sbjct: 63 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSL 122
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++ + E + +V+ +L +
Sbjct: 123 EAIMAVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVK------------ILVPNS 170
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ ESG+ + + ++ ++ I + G + AL+ + L
Sbjct: 171 TAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQERCITVIGEKENNRNALMMI---L 227
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ +S IC N V Y++ S P + P
Sbjct: 228 AKVADDPQSGICPN-----VSYADVSGPVANYNP 256
>gi|308486259|ref|XP_003105327.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
gi|308256835|gb|EFP00788.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
Length = 441
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 38/208 (18%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D +S +++ P+ VG +IG+ G + +++ D CR+ +PG+ R+ LV G +
Sbjct: 41 DHLSIKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLN 100
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
++ D + E +A F+ + G+++ ++ T
Sbjct: 101 NIMAVIESIQDKIRE----KCADQAGNDAFDH--------KNTSRGNEIK---IVMPNTS 145
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+V+GK G N+ +R + G +I + P L ++ AL+ +
Sbjct: 146 AGMVIGKSGANIKDIREQFGCQIQVYPKAGSVEAKTSLERVVTVAHEESAALLQAAS--- 202
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPH 227
R +EKV +SDPH
Sbjct: 203 -------------RVLEKV----ASDPH 213
>gi|148665205|gb|EDK97621.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_b
[Mus musculus]
Length = 564
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 48/315 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 207 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 255
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 256 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 303
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V+ + A + M+K
Sbjct: 304 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVRGTIEACANA--EIEIMKK 355
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 356 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSG 415
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 416 YFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 475
Query: 311 -APLTKSGERVVTIS 324
A ER+V I+
Sbjct: 476 PAEGPDVSERMVIIT 490
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 130/332 (39%), Gaps = 68/332 (20%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ R + P+ G +IG+SG I ++RR RI+ + S RI
Sbjct: 20 IELRFLIPSKAAGSVIGKSGENIRNLRRMFMARIN---------------ISDNSGPERI 64
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDD-VAYCGL--LANTTKI 140
+ E D + + E + + E+M + G GD +D + + L L N + +
Sbjct: 65 LSLEAD-------LDTILEILTQCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLV 117
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G ++G+GG + +R + +++ + C D+++Q+ G A+ V C+
Sbjct: 118 GALIGRGGGRINDLREKCDLRVLKVYQTVCPDSTDRIVQLVG-------AIPLVIDCIGK 170
Query: 201 LSTMEKSPICFNRPIE--KVFYSNSSDPH-----------REFFPHLSLV--------PP 239
+ M C P+ KV Y + H P+ +L P
Sbjct: 171 IVDM-----CKETPVREPKVNYDAQNYDHAAANHYGGWAQNAIRPNNNLTTRSLGFSRPG 225
Query: 240 LTGNPSDNASEFHSSS-------ADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKR 292
+ + +E + S D + D++ + +R+ IIG
Sbjct: 226 FLKHQASYKNEHYDYSYPNNYREMDTSFRNSHYDEQDNNEVQEIRLPHK--VVGAIIGPG 283
Query: 293 GAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
G+ ++ ++ SGA I+ ++P ERVVTIS
Sbjct: 284 GSRIQQVRMDSGAHITISSPDRNPQERVVTIS 315
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+G ++G GG + ++R++SGA I + P ++++ I+G T VK+A + CL
Sbjct: 276 VGAIIGPGGSRIQQVRMDSGAHITISSPDRNPQ--ERVVTISGNTQDVKRAFSMINECL 332
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 137/319 (42%), Gaps = 51/319 (15%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+++ R + + G +IG++G ++ +R +T + PG RV+ V G+
Sbjct: 226 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGA------ 279
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTT 138
+S T A V + + E ++ G G V+ G LL +
Sbjct: 280 --------------LSGTARAYALVAKGLLEGAPQM---GMGGIVSNNGTHPIRLLISHN 322
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAV 194
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+ +
Sbjct: 323 QMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAIWEI 377
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVP-PLTGNPSDNASEF-- 251
CL I +N + S S + + P TGN +D + +
Sbjct: 378 GKCLIDDWQRGTGTILYNPAVRSSVGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQSGG 437
Query: 252 ---HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
S+ ++R +P + + G + Q +++ G IIG+ G + ++ +SGA
Sbjct: 438 YGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGC----IIGRGGTKITEIRRSSGA 493
Query: 306 LISFA-APLTKSGERVVTI 323
IS A AP ++GER+ TI
Sbjct: 494 RISIAKAPHDETGERMFTI 512
>gi|90076756|dbj|BAE88058.1| unnamed protein product [Macaca fascicularis]
Length = 536
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 25/157 (15%)
Query: 37 GGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IGR G IS I++++ C+I GG P R ++ G+
Sbjct: 5 GFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPE-------------- 47
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
V S + + ++ E+ GDG G+ V ++ +K G+V+GKGG + +
Sbjct: 48 ---SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLVIGKGGETIKQ 102
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ +G K+VM+ D+ ++ITG V++A
Sbjct: 103 LQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 139
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 19/195 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG------ST 66
Query: 334 SPVQNAAVLVFARSVEVEGQ-QGFSSGEN--KGDAVAVSILVGADFVGCLTGSGSSAVSE 390
+ + A L+ + E Q Q +SG + + + ++V A G L G G S + E
Sbjct: 67 NAIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 126
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
+ +VTG I++ ++L + + V I +GE A+++ + + +
Sbjct: 127 IREVTGASIQV--ASEMLPNSTERAVTISGTGE------AITQCIYHICTVMLESPPKGA 178
Query: 451 ARPRSPSGRVGGPAL 465
P P +VGGP +
Sbjct: 179 TIPYRPKPQVGGPVI 193
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 185/449 (41%), Gaps = 69/449 (15%)
Query: 9 GYSSKRRGPL----NLPDDV-VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG 63
G+SS+ RG + P + R++ PT VG +IG+ G I ++ + T+ ++
Sbjct: 94 GHSSRERGSSPGGSSQPKQLEFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDI--- 150
Query: 64 FPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG 123
HR +G+ ++ I EG EA + + M + E +
Sbjct: 151 -----HRK---ENAGAAEKPITI---HATPEG-----CSEACRMILDIM---QKEADETK 191
Query: 124 DGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITG 182
+++ +LA+ + +G ++GK GRN+ ++ ++G KI + P + ++ I + G
Sbjct: 192 SAEEIP-LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKG 250
Query: 183 ATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTG 242
+T A KA V + L+ E + N+ + N + F LS++P G
Sbjct: 251 STEACSKAQVEIMKKLR--EAYENDVVAVNQQANLIPGLN-LNALGIFSTGLSMLPSTPG 307
Query: 243 NPSDNASE----FHSSSADAD------------RDHPGLDKKGRKQEVALRMLFSGWTAS 286
A+ F SSSA HP + QEV + +
Sbjct: 308 ARGAAAATPYHPFASSSAYLSGLYGAPPGSAFPHQHPLPE-----QEV-VNLFIPTQAVG 361
Query: 287 GIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFA 345
IIGK+G ++ L +GA I A A + ER+V I+ + A +F
Sbjct: 362 AIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFK------AQGRIFG 415
Query: 346 RSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGE 405
+ E + F+ E + I V + G + G G V+E++++T ++ +V +
Sbjct: 416 KLKE---ENFFNPKEEV--KLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRD 469
Query: 406 QVLGCAAQNDVVIQISGEYKNVQNALSEV 434
Q +V+++I G + Q A ++
Sbjct: 470 QT--PDENEEVIVKIIGHFFASQTAQRKI 496
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 86/209 (41%), Gaps = 30/209 (14%)
Query: 240 LTGNPSDNASEFHSSSADADR----DHP---GLDKKGRKQEVALRMLFSGWTASGIIGKR 292
+ G S A + + D DR P G + ++ + +R+L S +A IIGK
Sbjct: 9 INGTDSPKAMKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKG 68
Query: 293 GAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEG 352
G ++ L+ A + P + + ERV T++A E VL + V
Sbjct: 69 GENIKRLRAEFNAHVQ--VPDSNTPERVCTVTADE-----------KTVLNILKDVLPRL 115
Query: 353 QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA- 411
+ FS + D V +LV G L G S + E+ + +K+ GCA
Sbjct: 116 EDNFS----ERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIF-----TGCAP 166
Query: 412 AQNDVVIQISGEYKNVQNALSEVVGRLRH 440
D V+ SGE KNV + EV+ L+
Sbjct: 167 GSTDRVLITSGEQKNVLGIIEEVMKELKE 195
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 114/291 (39%), Gaps = 42/291 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
R + G +IG+ GS I+ + + RI FPG+ R+I+V G+
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGA------ 91
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ Q AV + ++ E E D D + L+ G +
Sbjct: 92 --------------INEIQRAVELILSKLLS-ELHSEDDNDAEPKTKVRLVVPNGSCGGI 136
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPP-ACAAIDDQLIQITGATLAVKKALVAVTTCLQ--- 199
+GKGG + +S A I + P +D+L+ +TG+ +A+ + + L
Sbjct: 137 IGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDP 196
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADAD 259
H + SP + V++S + P+ ++P + P+ NA + + A
Sbjct: 197 HYAQSMNSPFSY----PGVYFSG-----YQGVPYTYVLPSV-APPAYNAVNYRPNGAAGG 246
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ L ++ +L M + ++G+ G + + ASGA I +
Sbjct: 247 K----LQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKIS 293
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 136/328 (41%), Gaps = 71/328 (21%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+++ R + + G +IG++G ++ +R +T + PG RV+ V G
Sbjct: 42 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGP------ 95
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTT 138
+ T A V + + E ++ G G V+ G LL +
Sbjct: 96 --------------LQGTARAYALVAKGLLEGAPQM---GMGGVVSNNGTHPVRLLISHN 138
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAV 194
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+ +
Sbjct: 139 QMGTIIGRSGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAVWEI 193
Query: 195 TTCLQHLSTMEKSPICFNRPI----------EKVFYSNSSDPHREFFPHLSLVPPLTGNP 244
CL I +N + + V SS P+ TGN
Sbjct: 194 GKCLIDDWQRGTGTILYNPAVRASVGTAPVNQNVGNGYSSRPYNR-----------TGNG 242
Query: 245 SDNASEF-----HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIV 296
+D + + S+ ++R +P + + G + Q +++ G IIG+ G+ +
Sbjct: 243 ADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGC----IIGRAGSKI 298
Query: 297 RSLQNASGALISFA-APLTKSGERVVTI 323
++ +SGA IS A AP +GER+ TI
Sbjct: 299 TEIRRSSGARISIAKAPHDDTGERMFTI 326
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 96/233 (41%), Gaps = 46/233 (19%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
F+++ P G +IG+ G I+ ++++ R+ +PG+ RV L+ GS
Sbjct: 52 FKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGS------ 105
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA----YCGLLANTTK 139
VEG V E ++ + + A++ D D A +L +
Sbjct: 106 ---------VEG--VLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPAEREKQVKILVPNST 154
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+++GKGG + +++ ESGA + + A+ ++ I + G KKA C
Sbjct: 155 AGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCITVIGELENNKKA------CHM 208
Query: 200 HLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNAS 249
L+ + + P C + V Y+ + P F P TG+P N S
Sbjct: 209 ILAKIVEDPQSGSCLH-----VSYAEVTGPVANFNP--------TGSPYANPS 248
>gi|1575609|gb|AAC50893.1| FUSE binding protein 3, partial [Homo sapiens]
Length = 600
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 87/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L+ V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 79 YGYGVQKRPLDDGVGNQLGALDHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 138
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 139 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 175
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 176 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 235
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 236 A---DKPLRITGDAFKVQQA 252
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 20/180 (11%)
Query: 261 DHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERV 320
D P +G V LR+L A IIGK GA ++ L++ A ++ P + ERV
Sbjct: 13 DVPLKKTRGEGPNVELRILLQSKNAGAIIGKGGANIKRLRSDYNATVT--VPDSSGPERV 70
Query: 321 VTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCL 380
+T+ A + A ++ +E + F E + + L+ GC+
Sbjct: 71 LTVGA---------NLGTALEILLDVIPSLEDYKRFKDLEFE---CEMRWLIHQSQAGCV 118
Query: 381 TGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQ-NDVVIQISGEYKNVQNALSEVVGRLR 439
G G + + E+ D TG IK+ CA Q ++ ++Q++G+ + V N+L+ + L+
Sbjct: 119 IGRGGNKIKELRDETGAQIKVYS-----QCAPQSSERIVQLTGKPRVVVNSLATIFDLLQ 173
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 87/216 (40%), Gaps = 48/216 (22%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V R++ + G +IG+ G+ I +R SD+ + V S R+
Sbjct: 26 VELRILLQSKNAGAIIGKGGANIKRLR---------------SDYNATVTVPDSSGPERV 70
Query: 85 MFCENDVVVEGGEVSSTQEAVIRV------FERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+ G + + E ++ V ++R ++E E E L + +
Sbjct: 71 LTV-------GANLGTALEILLDVIPSLEDYKRFKDLEFECE----------MRWLIHQS 113
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+ G V+G+GG + +R E+GA+I + A + ++++Q+TG V +L + L
Sbjct: 114 QAGCVIGRGGNKIKELRDETGAQIKVYSQCAPQS-SERIVQLTGKPRVVVNSLATIFDLL 172
Query: 199 QHLSTMEKSPICFNRPIE----KVFYSNSSDPHREF 230
Q P FN P + FY+ + +F
Sbjct: 173 QT-----APPKGFNNPYDPNNFDEFYAPEYGGYTQF 203
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 134/318 (42%), Gaps = 47/318 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+++ R + + G +IG++G ++ +R +T + PG RV+ V G
Sbjct: 43 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGP------ 96
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG--DGDDVAYCGLLANTTKIG 141
+ T A V + + E ++ G + + LL + ++G
Sbjct: 97 --------------LQGTARAYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMG 142
Query: 142 VVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
++G+ G + ++ SG ++V MLP ++++++ G ++KA+ + C
Sbjct: 143 TIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAVWEIGKC 197
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL--TGNP---SDNASEFH 252
L I +N + + SS + P TGN SD S +
Sbjct: 198 LIDDWQRGTGTILYNPAVRASVGTGSSINTNTTASNGYNSRPYNRTGNGADFSDGQSAGY 257
Query: 253 SSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
S ++ D R +P + + G + Q +++ G IIG+ G+ + ++ +SGA
Sbjct: 258 SRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGC----IIGRGGSKITEIRRSSGAR 313
Query: 307 ISFA-APLTKSGERVVTI 323
IS A AP ++GER+ TI
Sbjct: 314 ISIAKAPHDETGERMFTI 331
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 139/318 (43%), Gaps = 52/318 (16%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+++ R + + G +IG++G ++ +R +T + PG RV+ V G
Sbjct: 41 MLTLRAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGP------ 94
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTT 138
+ T A V + + E ++ G G V+ G LL +
Sbjct: 95 --------------LHGTARAYALVAKGLLEGAPQM---GMGGIVSNNGTHPVRLLISHN 137
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAV 194
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+ +
Sbjct: 138 QMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAVWEI 192
Query: 195 TTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP---SDNASEF 251
CL I +N + S S++ + + S TGN SD + +
Sbjct: 193 GKCLIDDWQRGTGTILYNPAVRASVGSGSTNTNM-GNGYGSRPYNRTGNGADFSDQSGGY 251
Query: 252 HS--SSADADRDHPGLDKKG---RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGAL 306
S S++DA R P + + G + Q +++ G IIG+ G+ + ++ +SGA
Sbjct: 252 SSRRSNSDAGR-FPMVAEDGDEIQTQNISIPADMVGC----IIGRAGSKITEIRRSSGAR 306
Query: 307 ISFA-APLTKSGERVVTI 323
IS A AP ++GER+ TI
Sbjct: 307 ISIAKAPHDETGERMFTI 324
>gi|397603279|gb|EJK58384.1| hypothetical protein THAOC_21490 [Thalassiosira oceanica]
Length = 689
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF---PGSDHRVILVVGSG 78
+ V+ ++ P VVG +IGR G I+S++R T CR+ + PG+ RVI + +
Sbjct: 210 EPVIEEKIGIPNGVVGYIIGRGGESITSMQRRTNCRVQIQKEHEMAPGTAQRVITLTAAS 269
Query: 79 ------------SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGD 126
++ + M N + + G +++Q A ++ +A EG
Sbjct: 270 KDSVAACRAIIENMVKERMVQSNSISIGSGNNATSQMAQLQ--------KALAEGQ---- 317
Query: 127 DVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLA 186
A+ +G+V+GKGG + ++ +SGA I + P A D+ ++ T
Sbjct: 318 --AHVTCKVPDADVGLVIGKGGMQIKLIQEKSGANIQI---PQMADTDNPAMRTVNITHQ 372
Query: 187 VKKALVAVTTCLQHL 201
K+ T ++ +
Sbjct: 373 NKEGAEFAKTMIEEV 387
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRVILVVGS 77
V+ ++ CP VG +IGR G +I ++ T+CRI PGS +R+I VVGS
Sbjct: 400 VTIQVNCPDRDVGMIIGRGGCVIKQMQNTTRCRIQIPPTAPPGSQYRIISVVGS 453
>gi|226529800|ref|NP_001141507.1| uncharacterized protein LOC100273619 [Zea mays]
gi|194704864|gb|ACF86516.1| unknown [Zea mays]
gi|223950149|gb|ACN29158.1| unknown [Zea mays]
gi|413941634|gb|AFW74283.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 702
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH---RVILVVGS-GSI 80
+S ++ P VG +IG++G I +++ + +I + R + +VG+ GS+
Sbjct: 144 ISRKIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGSV 203
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D+ ++ V+ E E + + R F + E + K+
Sbjct: 204 DKAEQLIKS-VIAEA-EAGGSPALIARGFGSGQPGSEQFE------------MTVPDNKV 249
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKA 190
G+++GKGG + M+ +SGA+I ++P PP + ++++++TG ++ A
Sbjct: 250 GLIIGKGGETIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTGNKKQIEAA 301
>gi|50292201|ref|XP_448533.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527845|emb|CAG61494.1| unnamed protein product [Candida glabrata]
Length = 460
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 10 YSSKRRGP-LNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
Y+S + P N+ +S R++C ++G G I+ ++ T +I+ G
Sbjct: 65 YTSTKLDPKTNIQSQDISLRMLCLVKQASIIVGPKGESINKLKEQTSTKINVSPNIRGVP 124
Query: 69 HRVILVVGSGSIDRRIMFCEN---------DVVVEGGEVSSTQEAVIRVFERMWEVEAEV 119
RVI V GS CEN +++E ++ ++ + + ++
Sbjct: 125 ERVIHVKGS---------CENVGKAFGKIARIIIEKDSKNNANQSSSSLDSEASQNSSDA 175
Query: 120 EGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQ 179
E D LL + +G V+GKGG + + S AK+ P + +D+++
Sbjct: 176 E-----DTTLILNLLISHALMGSVIGKGGSQLREIEERSAAKLYASPNQLMMS-NDRILS 229
Query: 180 ITGATLAVKKALVAVTTCL 198
ITG A+ A V L
Sbjct: 230 ITGVPDAIHIATYYVAQSL 248
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 29/193 (15%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R +
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPS 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ D+
Sbjct: 154 -FHNDVDGNSTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKP 211
Query: 178 IQITGATLAVKKA 190
++ITG V++A
Sbjct: 212 LRITGDPFKVQQA 224
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 27/183 (14%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
+R+L S +A IIGK G ++ L+ A + P + + ERV T++A E
Sbjct: 52 VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQ--VPDSNTPERVCTVTADE-------- 101
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
VL + V + FS + D V +L+ G L G S + E+ +
Sbjct: 102 ---KTVLNILKDVLPRLEDNFS----ERDPCEVRMLIHQSHAGALIGRNGSKIKELREKC 154
Query: 396 GTDIKLVGGEQVLGCA-AQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR 454
+K+ GCA D V+ SGE KNV + EV+ LK I A P
Sbjct: 155 SARLKI-----FTGCAPGSTDRVLITSGEQKNVLAIIEEVM----RELKEIPIKGSATPY 205
Query: 455 SPS 457
PS
Sbjct: 206 LPS 208
>gi|350529339|ref|NP_001121330.2| KH-type splicing regulatory protein precursor [Xenopus laevis]
Length = 732
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 16/169 (9%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IGR G I+ I++++ C++ G RV+ + GS + +D+
Sbjct: 159 PDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLLDDI 218
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
V G +Q +G + + ++ K G+++GKGG +
Sbjct: 219 VARGRGGPPSQ----------------FHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETI 262
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
+++ +G K++++ + D+ ++I G V++A V L+
Sbjct: 263 KQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLKE 311
>gi|256078989|ref|XP_002575774.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043995|emb|CCD81541.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 530
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 98 VVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 155
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 156 AKQMI-GDIIERAGKNGTPTTPAYNSTGSITTIEMMVPG----------------LKAGL 198
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 199 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAV 250
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTVQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + + G ++ Y K G+V+G
Sbjct: 315 HIINELILTAQERDGFGGLAVARGRGRGRGDWSMGTPGGIQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>gi|219886695|gb|ACL53722.1| unknown [Zea mays]
Length = 702
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH---RVILVVGS-GSI 80
+S ++ P VG +IG++G I +++ + +I + R + +VG+ GS+
Sbjct: 144 ISRKIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNALTRPVELVGTPGSV 203
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D+ ++ V+ E E + + R F + E + K+
Sbjct: 204 DKAEQLIKS-VIAEA-EAGGSPALIARGFGSGQPGSEQFE------------MTVPDNKV 249
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKA 190
G+++GKGG + M+ +SGA+I ++P PP + ++++++TG ++ A
Sbjct: 250 GLIIGKGGETIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTGNKKQIEAA 301
>gi|242060324|ref|XP_002451451.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
gi|241931282|gb|EES04427.1| hypothetical protein SORBIDRAFT_04g002170 [Sorghum bicolor]
Length = 508
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Query: 321 VTISALEYLDTRHSPVQNAAVLVFARSVEVE--GQQGFSSGENKGDAVAVSILVGADFVG 378
V +SA E ++ SP NAA+ +F E+E G S + D +V +LV +
Sbjct: 113 VLVSAKEEVEAEMSPAMNAAIKIFKHINEIEEINSDGTLSA-SASDICSVRLLVPFEQAV 171
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
L G + +E+ TGT +++ +++L ++ +++I G V NAL V+ L
Sbjct: 172 HLIGKQGVTIKSIEESTGTTVRIRDEDELLSHETVDERIVEIRGASLKVLNALKSVLELL 231
Query: 439 RHNLKSGEILN 449
R L +L+
Sbjct: 232 RKFLVDHGVLH 242
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 38 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 97
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 98 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 140
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG++ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 141 -FHNDVDGNNTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 195
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 196 DKPLRITGDPFKVQQA 211
>gi|171847306|gb|AAI61696.1| LOC100158419 protein [Xenopus laevis]
Length = 674
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IGR G I+ I++++ C++ G RV+ + GS + +D+
Sbjct: 101 PDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLLDDI 160
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
V G +Q +G + + ++ K G+++GKGG +
Sbjct: 161 VARGRGGPPSQ----------------FHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETI 204
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICF 211
+++ +G K++++ + D+ ++I G V++A V L+ E+ F
Sbjct: 205 KQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLK-----ERDQANF 259
Query: 212 NR 213
+R
Sbjct: 260 DR 261
>gi|270009705|gb|EFA06153.1| hypothetical protein TcasGA2_TC008998 [Tribolium castaneum]
Length = 564
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 110/246 (44%), Gaps = 46/246 (18%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D F+++ P+ G +IG+ G I+ ++++T R+ +PG+ RV L+ +G
Sbjct: 42 DGTYHFKVLVPSVAAGAIIGKGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLI--TG 99
Query: 79 SIDRRIMFCE--NDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
S+D ++ + D + E +++ + + E E+++ D D +L
Sbjct: 100 SVDAIMVVADFIADKIREKPDLT----------KPLVETESKLMQDRD----KQVKILVP 145
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
+ G+++GK G + +++ SG+ + + ++ ++ I + G ++A
Sbjct: 146 NSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVSLQERCITVIGEKEQNRQA------ 199
Query: 197 CLQHLSTMEKSP---ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP---SDNASE 250
C L+ + + P C N V Y++ + P + P TG+P + S
Sbjct: 200 CQMILAKIVEDPQSGTCLN-----VSYADVNGPVANYNP--------TGSPFAQQNAGSA 246
Query: 251 FHSSSA 256
F++S+A
Sbjct: 247 FNASTA 252
>gi|147902659|ref|NP_001083916.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|213625145|gb|AAI69923.1| RNA-binding protein VgRBP71 [Xenopus laevis]
Length = 672
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 76/168 (45%), Gaps = 16/168 (9%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IGR G I+ I++++ C++ G R++ + G+ ++ +D+
Sbjct: 101 PDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERIVSLTGNPDAVQKAKMLLDDI 160
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
V+ G +Q +G + + ++ K G+++GKGG +
Sbjct: 161 VLRGRGGPPSQ----------------FHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETI 204
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+++ +G K++++ + D+ ++I G V++A V L+
Sbjct: 205 KQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQACEMVMDLLK 252
>gi|171686672|ref|XP_001908277.1| hypothetical protein [Podospora anserina S mat+]
gi|170943297|emb|CAP68950.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 135/340 (39%), Gaps = 88/340 (25%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG++G ++ +R +T + PG RV+ + G
Sbjct: 58 MTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVYDRVLTITGG------- 110
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD---GDGDDVAYCG-----LLAN 136
C EA+ + + ++ A +EG G G VA G LL +
Sbjct: 111 --C---------------EAISKAYAKV--ASALMEGAPAMGMGGVVAANGTHPIKLLIS 151
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
++G V+G+ G + ++ SG ++V MLP ++++++ G +++A
Sbjct: 152 HNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERVVEVQGTPEGIQRATW 206
Query: 193 AVTTCLQHLSTMEKSPICFN-------------------RPIEKVFYSNSSDPHREFFPH 233
+ CL + + +N P E+ Y SS R
Sbjct: 207 EICKCLVDDWQRGQGTVLYNPVVRTGTGAGAPAMGGASSYPQERAPYGGSSRVTR----- 261
Query: 234 LSLVPPLTGNPSDNAS------EFHSSSADADRDHPGLDKKGRK---QEVALRMLFSGWT 284
TGN +D ++ S S A R P D+ G + Q +++ G
Sbjct: 262 -------TGNGADFSNGGPRQYNRRSDSDAAQRGPPTHDENGEEIQTQNISIPADMVGC- 313
Query: 285 ASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
IIG+ G+ + ++ SGA IS A AP +GER+ TI
Sbjct: 314 ---IIGRAGSKISEIRKTSGARISIAKAPHDDTGERMFTI 350
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 174/434 (40%), Gaps = 60/434 (13%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P P + RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 192 PSKPPHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KEN 240
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
+G+ ++ I + ST E + ++ + D D ++A+
Sbjct: 241 AGAAEKPI------------SIHSTPEGCSAACRMILDIMHQEAKDTKTADEVPLKIMAH 288
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
+G ++GK GRN+ ++ ++ KI + P + D + T+ VK ++ A
Sbjct: 289 NNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQDLTLYNPERTITVKGSIEAC-- 340
Query: 197 CLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSA 256
C + M+K + I + + P L+L G +++
Sbjct: 341 CQAEVEIMKKVREAYENDIA------AMNQQTHLIPGLNL--GALGLFPSSSNMPPPPPG 392
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTK 315
+A P G ++ + + IIGK+G ++ L +GA I A A
Sbjct: 393 NAVGGTP-YGCFGAPEQETVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPD 451
Query: 316 SGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGAD 375
S R+V ++ + A ++ + E + F G + + I + A
Sbjct: 452 SKMRMVIVTGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIKMAAA 500
Query: 376 FVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNAL 431
G + G G V+E++++T ++ +V EQ +ND V+++I+G + + Q +
Sbjct: 501 AAGRVIGKGGKTVNELQNLTAAEV-VVPREQT---PDENDQVIVKINGHFYASQLAQRKI 556
Query: 432 SEVVGRLRHNLKSG 445
+++ +++ K G
Sbjct: 557 RDILTQVKQTQKGG 570
>gi|148232337|ref|NP_001090834.1| far upstream element (FUSE) binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|134023819|gb|AAI35377.1| fubp3 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 8 YGYSSKRRGPLNLP-----------DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKC 56
YGY ++R PL+ P V++ P +VG +IGR G IS I+ ++ C
Sbjct: 52 YGYGVQKR-PLDDPVGNQLGALVHQRAVMTEEYKVPDKMVGFIIGRGGEQISRIQTESGC 110
Query: 57 RIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVE 116
+I G R ++ G+ + + + ++ +R
Sbjct: 111 KIQIAPDSGGMPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGP 153
Query: 117 AEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAI 173
D DG+ +L +K+G+V+GKGG + +++ +G K++M+ P P A
Sbjct: 154 G-FHNDMDGNSTVQE-ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA-- 209
Query: 174 DDQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 210 -DKPLRITGDPFKVQQA 225
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G + +
Sbjct: 256 SVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGLPDLCQHAA 315
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + + G ++ Y K G+V+G
Sbjct: 316 HIINELILTAQERDGFGALALARGRGRSRGDWNLSTPGSMQEITYT---VPADKCGLVIG 372
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 373 KGGENIKNINQQSGAHVELQRNPPP 397
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 146/389 (37%), Gaps = 73/389 (18%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
G LN+ ++ RL+ VG +IG+ G + +R ++ RI+ G S R++ +
Sbjct: 11 GSLNV---TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTIT 65
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA----- 129
G+ EA+ R F + + E ++ V
Sbjct: 66 GA------------------------TEAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPV 101
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKK 189
L+ ++ G ++GKGG + +R +GA++ + D L T + +
Sbjct: 102 TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVA--------GDMLPDSTERAVTISG 153
Query: 190 ALVAVTTCLQHL-STMEKSP-----ICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN 243
A+T C++H+ S M +SP I + V P + H +P
Sbjct: 154 TPQAITQCVRHICSVMLESPPKGATIPYRPKAVTVGVHAVLAPQQSA--HAFAIPGQYTF 211
Query: 244 PSDNASEFHS---------SSADADRDHPGLDKKG--RKQEVALRMLFSGWTASGIIGKR 292
+ ++ H S ++ PGLD QE+A+ F G IIG++
Sbjct: 212 AHQDLTKLHQLAMQHIPLPSLGQSNPTFPGLDPSAPTSSQEMAIPNDFIGC----IIGRQ 267
Query: 293 GAIVRSLQNASGALISFAAPLTKSGERVVTIS-------ALEYLDTRHSPVQNAAVLVFA 345
G+ + ++ SGA I A+ S R VTI+ +YL + + +
Sbjct: 268 GSKINEIRQVSGAHIKIASTTDGSAVRQVTITGSPASINVAQYLINASLEMAKYTMQAAS 327
Query: 346 RSVEVEGQQGFSSGENKGDAVAVSILVGA 374
+ V+ GFS A S+ V A
Sbjct: 328 SATPVDLNLGFSQSAPTASTAATSMAVLA 356
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 127/340 (37%), Gaps = 117/340 (34%)
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
E+ DG + LL + ++G ++GK G V +MR ESGA+I + + + +++
Sbjct: 6 EMSSDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGSSPERI 61
Query: 178 IQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLV 237
+ ITGAT A+ +A + +K F I SNSS ++
Sbjct: 62 VTITGATEAIFRAFAMIA---------QK----FEEDISAAM-SNSS---------VTSK 98
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
PP+T LR++F G +IGK G+ ++
Sbjct: 99 PPVT----------------------------------LRLVFPGSQCGSLIGKGGSKIK 124
Query: 298 SLQNASGALISFAAP-LTKSGERVVTISALEYLDT---RH-------SPVQNAAVLVFAR 346
++ +GA + A L S ER VTIS T RH SP + A + +
Sbjct: 125 EIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKGATIPYRPK 184
Query: 347 SVEV-----------------EGQQGFSSGE-NKGDAVAVS------------------- 369
+V V GQ F+ + K +A+
Sbjct: 185 AVTVGVHAVLAPQQSAHAFAIPGQYTFAHQDLTKLHQLAMQHIPLPSLGQSNPTFPGLDP 244
Query: 370 --------ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
+ + DF+GC+ G S ++E+ V+G IK+
Sbjct: 245 SAPTSSQEMAIPNDFIGCIIGRQGSKINEIRQVSGAHIKI 284
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LR+L G IIGK+G V+ ++ SGA I+ + S ER+VTI+ R
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITGATEAIFR- 73
Query: 334 SPVQNAAVLVFARSVEVEGQQGFS-SGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
A + A+ E + S S V + ++ G L G G S + E+
Sbjct: 74 ------AFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIR 127
Query: 393 DVTGTDIKLVG 403
+ TG +++ G
Sbjct: 128 ETTGAQVQVAG 138
>gi|367027192|ref|XP_003662880.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
gi|347010149|gb|AEO57635.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
Length = 374
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 99/210 (47%), Gaps = 28/210 (13%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G ++G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 140 LLISHNQMGTIIGRQGLKIKYIQDVSGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQ 194
Query: 189 KALVAVTTCL-----QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN 243
+A+ + CL + T+ +P+ + + S S ++ P+ TGN
Sbjct: 195 RAVWEICKCLVDDWQRGTGTVLYNPVVRTQGVGAPGISGGSSYMQDRAPYGGSRVTRTGN 254
Query: 244 PSD---NASEFHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGA 294
+D S ++ +D+D R P D+ G + Q +++ G IIG+ G+
Sbjct: 255 GADFSGGGSRPYTRRSDSDPAARGPPTHDENGEEIQTQNISIPADMVGC----IIGRAGS 310
Query: 295 IVRSLQNASGALISFA-APLTKSGERVVTI 323
+ ++ SGA IS A AP ++GER+ TI
Sbjct: 311 KISEIRKTSGARISIAKAPHDETGERMFTI 340
>gi|410074879|ref|XP_003955022.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
gi|372461604|emb|CCF55887.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
Length = 469
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 66/382 (17%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS------- 77
+ R++C ++G G IS +++DT CRI+ G RVI V GS
Sbjct: 96 IILRMLCLVKEASLIVGPKGETISKMKKDTNCRINVSKNIKGVPERVIYVKGSCDNVAKA 155
Query: 78 -GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY----CG 132
G + R + + G + +E+ + E E++ + Y
Sbjct: 156 FGLLVR--ILSQKKTFYNGSSQNQERESQTDLDENNGINANEIKLTEKKSPILYYPATLH 213
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL +G V+GK G + + S AK++ P + +D++++ITG A+ A
Sbjct: 214 LLIPHHLMGYVIGKHGSRLKEIEELSSAKLIASPHQLLPS-NDRILRITGVPDAIHIATF 272
Query: 193 AVT-TCLQHLSTMEKSPICFNR--PIEKVFYSNSSD-----PHREFFPH----------- 233
+ T + + + F + P+ V +N+ P R+ H
Sbjct: 273 YIAQTFMGFKDVLRTNKAIFYQPGPVYTVLGTNNYSQVAVLPLRQNNYHYMNRYNNNYRH 332
Query: 234 --------LSLVPPLTGNPSDNASEFH-----SSSADADRDHPGL--------DKKGRKQ 272
+++VP T P ++E S A+A P + Q
Sbjct: 333 RRSPKASLMAMVPSPTI-PQYTSNELQVTYTPESVANATSFVPKFTIPHVRIVENTMASQ 391
Query: 273 EVAL---RMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYL 329
+AL + + IIGK G + S++ +G I +P+ S ER +TI +
Sbjct: 392 PMALVEQEIYINSNYVGNIIGKEGKHITSIKETTGCSIFIDSPVEGSKERKITIKG-SAM 450
Query: 330 DTRHSPVQNAAVLVFARSVEVE 351
T+ AA+++ + +EV+
Sbjct: 451 GTQ------AAIMIISNKIEVD 466
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 101/241 (41%), Gaps = 15/241 (6%)
Query: 185 LAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP 244
+AVK+A+V + L+ + E + + + V + ++ H E P + +
Sbjct: 1 MAVKRAVVQMLQ-LEQVLCREHANVLATELLLPVLFRRAASSHSEVPSDTIRAPSVLPHS 59
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
+ + H + + + G + +R+L G IIGK+G V+ ++ SG
Sbjct: 60 TLSTLSLHPQLYFGKKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESG 119
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
A I+ + ER+VTI+ + + A++ + ++ S +K
Sbjct: 120 ARINISE--GNCPERIVTITG-----PTDAIFKAFAMIAYKFEEDIINSMSNSPATSK-P 171
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVG------GEQVLGCAAQNDVVI 418
V + ++V A G L G G S + E+ + TG +++ G E+ + + D +I
Sbjct: 172 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 231
Query: 419 Q 419
Q
Sbjct: 232 Q 232
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 93 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 148
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 149 MIAYKFEEDIINSMSNSPATSKPPV 173
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 54/305 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA 310
I A
Sbjct: 438 SIKIA 442
>gi|256089056|ref|XP_002580633.1| soluble guanylate cyclase gcy [Schistosoma mansoni]
Length = 1553
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 28/175 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI---HCEGGFPGSDHRVILVVGSGSID 81
+ F+++ P G +IG+ G I +I+R T R+ + +PG+ RV L++ G+++
Sbjct: 4 LHFKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLII--GTLE 61
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVI-----RVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
I +D V+ A+I ER +V+ +L
Sbjct: 62 ACIQL--HDYVMAKISKRPQNIAIITPTGVNCMERHKQVK----------------ILVP 103
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL 191
+ G+++GK G + R++ ES A I + P + ++ I ITG +KA+
Sbjct: 104 DSTAGIIIGKFGNFIERIKEESNAFIQVSQRPKDIRLFERCIVITGELKERRKAV 158
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 41/207 (19%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTIS-------- 324
V ++ + +IGK GA ++ +Q+ASGA ++ + L S ERV+++S
Sbjct: 193 VTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHI 252
Query: 325 ALEYL-------DTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAV--------- 368
A Y+ + R QN++ + S QG SS G A A+
Sbjct: 253 ATYYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQG-SSYVPIGHASALLQPHAPPPG 311
Query: 369 ------SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL---------VGGEQVLGCAAQ 413
I + D VGC+ G G S ++E+ V+ + IK+ + G+ A +
Sbjct: 312 AQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAPAAAHE 371
Query: 414 NDVVIQISGEYKNVQNALSEVVGRLRH 440
+ ++ I+G N+Q A+ + RL
Sbjct: 372 GERLVVITGAPNNIQIAVQLLYSRLEQ 398
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 241 TGNPSDNASEFHSSSADADRDHP-----GLDKKGRKQEVALRMLFSGWTASGIIGKRGAI 295
T +P E + D H G + ++ + +R+L S +A IIGK G
Sbjct: 12 TDSPKAMKREHENDEGDRSSRHKRQKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGEN 71
Query: 296 VRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQG 355
++ L+ A + P + + ERV T++A E VL + V +
Sbjct: 72 IKRLRAEFNAHVQ--VPDSNTPERVCTVTADE-----------KTVLNILKDVLPRLEDN 118
Query: 356 FSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA-AQN 414
FS + D V +L+ G L G + + E+ + +K+ GCA
Sbjct: 119 FS----ERDPCEVRVLIHQSHAGALIGRNGTKIKELREKCSARLKI-----FTGCAPGST 169
Query: 415 DVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPRSPS 457
D V+ SGE KNV + EV+ LK I A P PS
Sbjct: 170 DRVLITSGEQKNVLAIIEEVM----KELKEIPIKGSATPYLPS 208
>gi|403216407|emb|CCK70904.1| hypothetical protein KNAG_0F02390 [Kazachstania naganishii CBS
8797]
Length = 511
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 86/214 (40%), Gaps = 28/214 (13%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS---- 77
DD V R++C ++G G I+ I+RDT RI+ RVI V G
Sbjct: 105 DDYVHIRMLCLVKDASAVVGPKGDAITHIKRDTNTRINVSDNLKNVRERVIYVRGQCENV 164
Query: 78 GSIDRRIMFC----------------ENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
S +I C N+ + + +ST ++ + E E + +G
Sbjct: 165 ASAFEQISNCIYNKCKRGLSKNGKNDSNNSLSDEKSTTSTDGSITK------EEEDDTDG 218
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ LL +G ++GK G + + S A++ P + D++++++
Sbjct: 219 SKNQQLKISLQLLMPHHLMGYIIGKNGSRLKEIEEASSARLHASPHQLLPST-DRILRLS 277
Query: 182 GATLAVKKALVAVT-TCLQHLSTMEKSPICFNRP 214
G ++ KA+ ++ T L + ++ F +P
Sbjct: 278 GTPTSIGKAIFHISQTLLLNKDRLKNKKTIFYQP 311
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 90/445 (20%), Positives = 181/445 (40%), Gaps = 63/445 (14%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I V ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SVHSTPEGCSSACKMILEIMQKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK ++
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGSI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
C M+K + + + S H P L+L G ++S
Sbjct: 334 ENCCKAEQEIMKKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPP 385
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
+ P ++ +++ IIGK+G ++ L + A I A P
Sbjct: 386 PPSSVSGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
Query: 314 T-KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
T S R+V I+ + A ++ + E + F G + + I V
Sbjct: 446 TPDSKVRMVIITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRV 494
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KNVQN 429
A G + G G V+E++++T ++ +V +Q Q V+++I G + + Q
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPDENEQ--VIVKIIGHFYASQMAQR 551
Query: 430 ALSEVVGRLRHNLKSGEILNEARPR 454
+ +++ +++ + G+ N+ +PR
Sbjct: 552 KIRDILAQVKQQHQKGQ-NNQTQPR 575
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 54/305 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 331
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP +G P
Sbjct: 332 --NVETCAKAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPTSGMPP 384
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+S P + + + + + + IIGK+G ++ L +GA
Sbjct: 385 -------PTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 437
Query: 306 LISFA 310
I A
Sbjct: 438 SIKIA 442
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQE-ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HVINELILTAQERDGFGGLAVARGRGRGRGDWSVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG------PT 66
Query: 334 SPVQNAAVLVFARSVEV-EGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
+ + A L+ + E E Q G S + + ++V A G L G G S + E+
Sbjct: 67 NAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIR 126
Query: 393 DVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEAR 452
+VTG I++ ++L + + V ISG + + + + + + G +
Sbjct: 127 EVTGASIQV--ASEMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGATI---- 178
Query: 453 PRSPSGRVGGPAL 465
P P +V GP +
Sbjct: 179 PYRPKPQVAGPVI 191
>gi|212542979|ref|XP_002151644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
gi|210066551|gb|EEA20644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
Length = 367
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 132/325 (40%), Gaps = 60/325 (18%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG------- 76
V++ R + + G +IG++G ++ +R +T + G RV+ V G
Sbjct: 47 VLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGGLQGCAR 106
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
+ SI + + V GG V + IR LL +
Sbjct: 107 AYSIVAKGLLEGAPQVGMGGVVQNNGTHPIR-------------------------LLIS 141
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+
Sbjct: 142 HNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAVW 196
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDP-HREFFPHLSLVPPLTGNPSDNASEF 251
+ CL + +N P +V S P H S + N + N ++F
Sbjct: 197 EIGKCLIDDWQRGTGTVLYN-PAVRVSVGGSGQPSHNGDRTGGSYGGGRSYNRTGNGADF 255
Query: 252 HSSSA---------DADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSL 299
S +A+R P + G + Q +++ G IIG+ G+ + +
Sbjct: 256 SEPSGGYNRRGSGDNANRSIPMVTDDGEEVQTQNISIPADMVGC----IIGRGGSKISEI 311
Query: 300 QNASGALISFA-APLTKSGERVVTI 323
+ +SGA IS A AP ++GER+ TI
Sbjct: 312 RRSSGARISIAKAPHDETGERMFTI 336
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 102 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 161
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 162 IQIAPESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 204
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG++ +L +K+G+V+GKGG + +++ +G K++M+ P P A
Sbjct: 205 -FHNDVDGNNTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA--- 259
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 260 DKPLRITGDPFKVQQA 275
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 87/229 (37%), Gaps = 15/229 (6%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S RV V+G +
Sbjct: 306 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPERCQHAA 365
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+D+++ E + + V G +V Y K G+V+G
Sbjct: 366 HVISDLILTAQERDGFGSLSVPRGRGRGRSDWSVGAPGGLQEVTYT---VPADKCGLVIG 422
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
KGG N+ + +SGA + + PP ++ I G ++ A + + T
Sbjct: 423 KGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFTIRGIPQQIELARHLIDEKVG--GTN 480
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLS------LVPPLTGNPSDN 247
+P F + F + PH+ FP S + + GNP N
Sbjct: 481 MGAPGSFG---QSPFNQAPATPHQNTFPPRSSGCFPNIAAKVNGNPHSN 526
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
G + + + +LV A + C G S +S+++ T +++++ E + CA ++D +I
Sbjct: 178 GPDMDNIITTRLLVPASEIACFDGREGS-LSDIQRQTSANVQILPREDLPSCALESDELI 236
Query: 419 QISGEYKNVQNALSEVVGRLRHNL 442
QI GE K +NAL +V +LR L
Sbjct: 237 QIVGEIKAARNALIQVTTKLRSFL 260
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 97 EVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRI 156
E+ QEAV+ + + V+ D D++ LL ++I G+ G +++ ++
Sbjct: 159 ELFPAQEAVLHIQTHI------VDLGPDMDNIITTRLLVPASEIACFDGREG-SLSDIQR 211
Query: 157 ESGAKIVMLPP---PACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
++ A + +LP P+CA D+LIQI G A + AL+ VTT L+ E
Sbjct: 212 QTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYRE 263
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 25/194 (12%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVI 72
G + P VS P +VG +IGR G IS +++++ C+I GG P D V
Sbjct: 83 GGMGGPPRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMP--DRSVT 140
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG 132
L SI + + + + E+ A DG G V
Sbjct: 141 LTGLPESI------------------QTAKRLLTEIVEKGRPAPAFNPNDGPGMTVQE-- 180
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
++ +K G+V+GKGG + ++ +G K+VM+ D+ ++I+G V++A
Sbjct: 181 IMIPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFKVQQAKE 240
Query: 193 AVTTCLQHLSTMEK 206
V ++ E+
Sbjct: 241 MVMDLIRDQGFREQ 254
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTR 332
++ R L A IIG+ GA +R+L+ A+I+ P ++ ERV+ I + +T
Sbjct: 95 KIWCRFLIPSKVAGAIIGRGGATIRALREEYQAIINI--PEARAPERVLKI-CVNSRETL 151
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
H+ V A ++ + E +G +G K + ILV + G + G+ S V +
Sbjct: 152 HTIVSQIAEIL-----KNENAKGSHNGRRKEGETELRILVQSSQAGAIIGTKGSTVKNLR 206
Query: 393 DVTGTDIKL 401
+ TG+ I +
Sbjct: 207 ETTGSRINI 215
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 33/187 (17%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D + R + P+ V G +IGR G+ I ++R + + +I + + +
Sbjct: 92 PSDKIWCRFLIPSKVAGAIIGRGGATIRALREEYQA--------------IINIPEARAP 137
Query: 81 DRRIMFCEND------VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLL 134
+R + C N +V + E+ + A R E E E+ +L
Sbjct: 138 ERVLKICVNSRETLHTIVSQIAEILKNENAKGSHNGRRKEGETELR------------IL 185
Query: 135 ANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
+++ G ++G G V +R +G++I + P C +++ I G V K + +
Sbjct: 186 VQSSQAGAIIGTKGSTVKNLRETTGSRININ-PECCPNSSERVAAIMGPPATVVKCISMI 244
Query: 195 TTCLQHL 201
L+ +
Sbjct: 245 YDILERV 251
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQTESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + + G ++ Y K G+V+G
Sbjct: 315 HVINELILTAQERDGFGGLAVARGRGRGRGDWSMGTPGGIQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 83/193 (43%), Gaps = 30/193 (15%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVI 72
GP++ D+ +++ P+ G +IG+ G I+ ++RDT + +PG+ RV
Sbjct: 70 GPID--DNKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVA 127
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-----VEAEVEGDGDGDD 127
L+ G V S + + +++ E V+A E +
Sbjct: 128 LLT--------------------GPVESLNNVAVFILDKIKESPQLGVKAGAETITSPER 167
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
++ + G+++GKGG + + +SG+++ + + +++I I+G +
Sbjct: 168 ARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLSERVITISGESDNN 227
Query: 188 KKALVAVTTCLQH 200
+KA+ + +Q
Sbjct: 228 RKAMSFIVNKIQE 240
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA-----PLTKSGERVVTISA-LEYL 329
L+ML A IIGK G + LQ +G + + P T+ ERV ++ +E L
Sbjct: 79 LKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQ--ERVALLTGPVESL 136
Query: 330 DTRHSPVQNAAVLVFARSVEVEGQQGFSSG----ENKGDAVAVSILVGADFVGCLTGSGS 385
+ N AV + + ++ Q G +G + A V I+V G + G G
Sbjct: 137 N-------NVAVFILDK-IKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKGG 188
Query: 386 SAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSG 445
+ + + + +G+ +++ Q ++ VI ISGE N + A+S +V +++ + +SG
Sbjct: 189 AMIKSIMEQSGSRVQI---SQKSDGITLSERVITISGESDNNRKAMSFIVNKIQEDPQSG 245
Query: 446 EILN 449
N
Sbjct: 246 SCNN 249
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HVINELILTAQERDGFGGLTVARGRGRGRGDWSVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGDNIKSINQQSGAHVELQRNPPP 396
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
++R++C GG+IG+SG+II SIR+ T I+ PG R+I + S +RR
Sbjct: 67 TTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI----SDNRR 122
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV 119
D S QEA+ V +R+ E EA+
Sbjct: 123 -----RDPDGRMPSFSPAQEALFSVHDRILESEAQF 153
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLD--- 330
R+L A G+IGK G I++S++ +GA I+ + ER++ IS D
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDG 127
Query: 331 --TRHSPVQNAAVLVFARSVEVEGQQGF 356
SP Q A V R +E E Q G+
Sbjct: 128 RMPSFSPAQEALFSVHDRILESEAQFGY 155
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S+ ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 125 SASKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 171
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 172 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDTKFTEEIP 216
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+LA+ +G ++GK GRN+ ++ ++ KI + P
Sbjct: 217 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP 252
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 150/386 (38%), Gaps = 81/386 (20%)
Query: 10 YSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH 69
+ + P N+P DV R++C ++G G+ IS I+ +T RI+ G
Sbjct: 53 FDNDHDSPDNVPSDV-HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPE 111
Query: 70 RVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-GDDV 128
R++ V G+ C+ +V+ ++R E G+ D G+D+
Sbjct: 112 RIVYVRGT---------CD--------DVAKAYGMIVRAL-------LEEHGNEDNGEDI 147
Query: 129 AY-CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAV 187
LL +G ++GK G + + S AK+ P + +D+++ I G A+
Sbjct: 148 EISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS-NDRILTINGVPDAI 206
Query: 188 KKALVAVTTCLQHLS----------TMEKSPICFNRPI------EKVFYSNS-----SDP 226
A ++ L + ++ P FN + +F+ + SD
Sbjct: 207 HIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDK 266
Query: 227 HREFFPHLSL----------VPPLTGNPSDNASEFHSSSADAD---------RDHPG--L 265
+ P+ +L P T NA+ F + + PG L
Sbjct: 267 LLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGNHL 326
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISA 325
+QE+ + F G +IGK G + S++ ++G I P+ S ER +TI
Sbjct: 327 LMNFVQQEIFIDEKFVG----NVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG 382
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVE 351
++ ++ AA+++ + +E++
Sbjct: 383 -TFMASQ------AAIMLISNKIEID 401
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S D D D P +V LRML AS I+G +GA + +++ + A I+ + +
Sbjct: 51 SHFDNDHDSPD----NVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNI 106
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI--L 371
ER+V Y+ V A ++ +E G E+ G+ + +SI L
Sbjct: 107 RGVPERIV------YVRGTCDDVAKAYGMIVRALLEEHG------NEDNGEDIEISINLL 154
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ +GC+ G S + E+ED++ + + +L ND ++ I+G
Sbjct: 155 IPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS----NDRILTING 201
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGS 77
P S P +VG +IGR G IS I++++ C+I GG P R + + G
Sbjct: 95 PSRSSSEEFKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP---ERSVTLTGP 151
Query: 78 GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
+ + + + + E+ A DG G V ++
Sbjct: 152 QD-----------------SIQAAKRLLSEIVEKGRPAPAFHHNDGPGMTVQE--IMVPA 192
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
+K G+V+GKGG + ++ +G K+VM+ D+ ++I+G V++A V
Sbjct: 193 SKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFKVQQAKEMVMEL 252
Query: 198 LQHLSTMEK 206
++ E+
Sbjct: 253 IREQGFREQ 261
>gi|410979294|ref|XP_003996020.1| PREDICTED: far upstream element-binding protein 3 [Felis catus]
Length = 572
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HVINELILTAQERDGFGGLAVARGRGRGRGDWSVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPPA 169
KGG N+ + +SGA + + PPP+
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPS 397
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRC-RNGP 152
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 153 GFHNDIDGNSTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPXGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HFINELILTAQERDGFGGLSVARGRGRGRGDWSVGTPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 53 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 112
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 113 IQIAPESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 155
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG++ +L +K+G+V+GKGG + +++ +G K++M+ P P A
Sbjct: 156 -FHNDVDGNNTIQE-ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA--- 210
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 211 DKPLRITGDPFKVQQA 226
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 87/229 (37%), Gaps = 15/229 (6%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S RV V+G +
Sbjct: 257 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPERCQHAA 316
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+D+++ E + + + G +V Y K G+V+G
Sbjct: 317 HVISDLILTAQERDGFGSLSVPRGRGRGRSDWSIGAPGGLQEVTYT---VPADKCGLVIG 373
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
KGG N+ + +SGA + + PP ++ I G ++ A + + T
Sbjct: 374 KGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFTIRGVPQQIELARHLIDEKVG--GTN 431
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLS------LVPPLTGNPSDN 247
+P F + F + PH+ FP S + + GNP N
Sbjct: 432 MGAPGGFG---QSPFNQAPATPHQNTFPPRSSGCFPNIAAKVNGNPHSN 477
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 89/232 (38%), Gaps = 26/232 (11%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HVINELILTAQERDGFGGLAVARGRGRGRGDWSVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKAL------VAVTTCL 198
KGG N+ + +SGA + + PP + ++ I G ++ A V V T L
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLIDEKVGVRTSL 431
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP------HLSLVPPLTGNP 244
+SP F++P + PH+ FP S+ + GNP
Sbjct: 432 GAPGAFGQSP--FSQP--------PAAPHQNTFPPRSSGCFPSIAAKVNGNP 473
>gi|431897017|gb|ELK06281.1| Far upstream element-binding protein 1 [Pteropus alecto]
Length = 632
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
V++ P +VG +IGR G IS I++D+ GG P R ++ G+
Sbjct: 100 VMTEEYKVPDGMVGFIIGRGGEQISRIQQDS-------GGLP---ERSCMLTGTPE---- 145
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
V S + + ++ E+ GDG G+ V ++ +K G+V
Sbjct: 146 -------------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQE--IMIPASKAGLV 190
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+GKGG + +++ +G K+VM+ D+ ++ITG V++A
Sbjct: 191 IGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYKVQQA 237
>gi|256078995|ref|XP_002575777.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043992|emb|CCD81538.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 396
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 98 VVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 155
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 156 AKQMI-GDIIERAGKNGTPTTPAYNSTGSITTIEMMVPG----------------LKAGL 198
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 199 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAV 250
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 70 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 129
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 130 IQIAPDSGGMPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 172
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K++M+ P P A
Sbjct: 173 -FHNDVDGNSTIQ-EILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA--- 227
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 228 DKPLRITGEPFKVQQA 243
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S RV V+G +
Sbjct: 274 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPDRCQHAA 333
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 334 HIINELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYT---VPADKCGLVIG 390
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 391 KGGENIKSINQQSGAHVELQRNPPP 415
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 131/335 (39%), Gaps = 72/335 (21%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
G LN+ ++ RL+ VG +IG+ G + +R ++ RI+ G S R++ +
Sbjct: 11 GSLNV---TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTIT 65
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA----- 129
G E + R F + + E ++ +V
Sbjct: 66 GP------------------------TEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPV 101
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKK 189
L+ ++ G ++GKGG + +R +GA++ + D L T + +
Sbjct: 102 TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVA--------GDMLPDSTERAVTISG 153
Query: 190 ALVAVTTCLQHL-STMEKSP----ICFNRPIEKVFYSNSSDPHREFFPHLSL----VPPL 240
A+T C++H+ S M +SP RP KV + + H P S +P
Sbjct: 154 TPQAITQCVRHICSVMLESPPKGATIPYRP--KVIPAGT---HAVLAPQHSAQAFAIPGQ 208
Query: 241 TGNPSDNASEFHS---------SSADADRDHPGLDKKG--RKQEVALRMLFSGWTASGII 289
+ ++ H S ++ PGLD QE+A+ F G II
Sbjct: 209 YAFAHQDLTKLHQLAMQHIPLPSLGQSNPTFPGLDASAPTSSQELAIPNDFIGC----II 264
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
G++G+ + ++ SGA I A+ S R VTI+
Sbjct: 265 GRQGSKINEIRQVSGAHIKIASATDGSAMRQVTIT 299
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LR+L G IIGK+G V+ ++ SGA I+ + S ER+VTI+ R
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITGPTEGIFR- 73
Query: 334 SPVQNAAVLVFARSVEVEGQQGFS-SGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
A + A+ E + + S V + ++ G L G G S + E+
Sbjct: 74 ------AFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIR 127
Query: 393 DVTGTDIKLVG 403
+ TG +++ G
Sbjct: 128 ETTGAQVQVAG 138
>gi|355689346|gb|AER98803.1| far upstream element binding protein 3 [Mustela putorius furo]
Length = 450
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ +L +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDIDGNSTIQE-ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 315 HVINELILTAQERDGFGGLAVARGRGRGRGDWSVGAPGGIQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPPA 169
KGG N+ + +SGA + + PPP+
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPPS 397
>gi|308499839|ref|XP_003112105.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
gi|308268586|gb|EFP12539.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
Length = 721
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 30/191 (15%)
Query: 257 DADR----DHP---GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
DADR P G + ++ + +R+L S +A IIGK G ++ L+ A +
Sbjct: 348 DADRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQ- 406
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
P + + ERV T++A E VL R V + FS + D V
Sbjct: 407 -VPDSNTPERVCTVTADE-----------KTVLNILRDVLPRLEDNFS----ERDPCEVR 450
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCA-AQNDVVIQISGEYKNVQ 428
+L+ G L G + + E+ + +K+ GCA D V+ SGE KNV
Sbjct: 451 MLIHQSHAGALIGRNGTKIKELREKCSARLKIFT-----GCAPGSTDRVLITSGEQKNVL 505
Query: 429 NALSEVVGRLR 439
+ EV+ L+
Sbjct: 506 AIIEEVMKELK 516
>gi|426363332|ref|XP_004048795.1| PREDICTED: far upstream element-binding protein 3 [Gorilla gorilla
gorilla]
Length = 572
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 111 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 147
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +DV +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 148 CRNGPGFHNDVDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 207
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 208 A---DKPLRITGDAFKVQQA 224
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+++++ E + V G ++ Y K G+V+G
Sbjct: 315 HIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 20/203 (9%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFP---GSDHRVILVVGSGSIDRR 83
+ + P+ G +IG+ G I ++++T I P G+ RV LV G+
Sbjct: 135 LKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEALNA 194
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 195 VHSFIAEKVREIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLI 245
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ +Q +
Sbjct: 246 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQE 302
Query: 204 MEKSPICFNRPIEKVFYSNSSDP 226
+S C N + Y+N + P
Sbjct: 303 DPQSSSCLN-----ISYANVAGP 320
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 9/183 (4%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL---TKSGERVVTISAL-EY 328
E L+ L + A IIGK G + LQ +GA I + T + ERV + E
Sbjct: 132 EYFLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEA 191
Query: 329 LDTRHSPVQNAA--VLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
L+ HS + + EV + N A ++V G + G G +
Sbjct: 192 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 251
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
V + + +G ++L ++ G Q VV +SGE + V A+S +V +++ + +S
Sbjct: 252 TVKAVMEQSGAWVQL--SQKPEGINLQERVVT-VSGEPEQVHKAVSAIVQKVQEDPQSSS 308
Query: 447 ILN 449
LN
Sbjct: 309 CLN 311
>gi|125559909|gb|EAZ05357.1| hypothetical protein OsI_27561 [Oryza sativa Indica Group]
gi|125601956|gb|EAZ41281.1| hypothetical protein OsJ_25788 [Oryza sativa Japonica Group]
Length = 700
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 26/187 (13%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH------CEGGFPGSDHRVILV 74
P S + P VG LIG+SG I +++ ++ +I + P R + +
Sbjct: 148 PGQETSRIINVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAP---TRSVEL 204
Query: 75 VGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
VG+ SID+ +N V+ E + + + R F + E +
Sbjct: 205 VGTLESIDKAERLIKN-VIAEA-DAGGSPALIARGFGSGQSGSEQFE------------M 250
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKAL 191
L K+G+++GKGG + ++ SGA+I ++P PP + ++ ++ITG ++ A
Sbjct: 251 LVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLTERTVRITGNKKQIEAAK 310
Query: 192 VAVTTCL 198
+ +
Sbjct: 311 DMIKQAM 317
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
P + + G + +R+L G IIGK+G V+ ++ SGA I+ + ER+VT
Sbjct: 3 PKVTEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVT 60
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I+ + + A++ F ++ S +K V + ++V A G L G
Sbjct: 61 ITG-----PTDAIFKAFAMIAFKFEEDINNSMTNSPATSK-PPVTLRLVVPASQCGSLIG 114
Query: 383 SGSSAVSEMEDVTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
G S + E+ + TG +++ G E+ + + D +IQ
Sbjct: 115 KGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGMPDAIIQ 157
>gi|256078999|ref|XP_002575779.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043990|emb|CCD81536.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 334
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 98 VVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 155
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 156 AKQMI-GDIIERAGKNGTPTTPAYNSTGSITTIEMMVPG----------------LKAGL 198
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 199 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAV 250
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 178/438 (40%), Gaps = 64/438 (14%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I V ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK A+
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
C M+K + + + S H P L+L G ++S
Sbjct: 334 ENCCRAEQEIMKKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPP 385
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
+ P ++ +++ IIGK+G ++ L + A I A P
Sbjct: 386 PPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
Query: 314 T-KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
T S R+V I+ + A ++ + E + F G + + I V
Sbjct: 446 TPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRV 494
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQ 428
A G + G G V+E++++T ++ +V +Q +ND V+++I G + + Q
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQ 550
Query: 429 NALSEVVGRLRHNLKSGE 446
+ +++ +++ + G+
Sbjct: 551 RKIRDILAQVKQQHQKGQ 568
>gi|257205944|emb|CAX82623.1| putative KH-type splicing regulatory protein [Schistosoma
japonicum]
Length = 513
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 75 VVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 132
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 133 AKQMI-GDIIERAGKNGTPTTTTYNSTGSITTIEMMVPG----------------LKAGL 175
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 176 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEKARQAV 227
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 6/167 (3%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
RML IIG +G VR L + A + + E+ V I E LD P
Sbjct: 57 FRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPP 116
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
+A + V+ +++ G + + + IL ++ L G ++ + + +
Sbjct: 117 AMDALLRVYQQTI---NNDSLDVGPD--NVIVRRILAPSEQAASLIGEHGVMINSIMEAS 171
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
TDI+++ + + A + D VI+I G V AL V LR L
Sbjct: 172 QTDIRVL-DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKYL 217
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 19/175 (10%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
FR++ P VG +IG G + + +T+ + GG + + +++ G +D
Sbjct: 57 FRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDE---- 112
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+ +A++RV+++ ++ D D+V +LA + + ++G+
Sbjct: 113 ----------PLPPAMDALLRVYQQTINNDS---LDVGPDNVIVRRILAPSEQAASLIGE 159
Query: 147 GGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G + + S I +L P A +D++I+I G+ V KAL V + L+
Sbjct: 160 HGVMINSIMEASQTDIRVLDDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLR 214
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 42/199 (21%)
Query: 8 YGYSSKRR---------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI 58
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+I
Sbjct: 38 YGYGVQKRPLDDGGNQLGALVHQRAVITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKI 97
Query: 59 HCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAE 118
G R ++ G+ + E R+ ++ V+
Sbjct: 98 QIAPDSGGMPERPCVLTGT---------------------PESIEQAKRLLGQI--VDRC 134
Query: 119 VEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACA 171
G G +DV +L +K+G+V+GKGG + +++ +G K++M+ P P A
Sbjct: 135 RNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGA 194
Query: 172 AIDDQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 195 ---DKPLRITGDAFKVQQA 210
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S RV V+G +
Sbjct: 241 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPDRCQHAA 300
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+++++ E + + V G ++ Y K G+V+G
Sbjct: 301 HIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYT---VPADKCGLVIG 357
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 358 KGGENIKSINQQSGAHVELQRNPPP 382
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 148/380 (38%), Gaps = 81/380 (21%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
P N+P DV R++C ++G G+ IS I+ +T RI+ G R++ V
Sbjct: 59 SPDNVPSDV-HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVR 117
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-GDDVAY-CGL 133
G+ C+ +V+ ++R E G+ D G+D+ L
Sbjct: 118 GT---------CD--------DVAKAYGMIVRAL-------LEEHGNEDNGEDIEISINL 153
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
L +G ++GK G + + S AK+ P + +D+++ I G A+ A
Sbjct: 154 LIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS-NDRILTINGVPDAIHIATFY 212
Query: 194 VTTCLQHLS----------TMEKSPICFNRPI------EKVFYSNS-----SDPHREFFP 232
++ L + ++ P FN + +F+ + SD + P
Sbjct: 213 ISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKP 272
Query: 233 HLSL----------VPPLTGNPSDNASEFHSSSADAD---------RDHPG--LDKKGRK 271
+ +L P T NA+ F + + PG L +
Sbjct: 273 NKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQ 332
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
QE+ + F G +IGK G + S++ ++G I P+ S ER +TI ++ +
Sbjct: 333 QEIFIDEKFVG----NVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG-TFMAS 387
Query: 332 RHSPVQNAAVLVFARSVEVE 351
+ AA+++ + +E++
Sbjct: 388 Q------AAIMLISNKIEID 401
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S +D D D P +V LRML AS I+G +GA + +++ + A I+ + +
Sbjct: 51 SHSDNDHDSPD----NVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNI 106
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI--L 371
ER+V Y+ V A ++ +E G E+ G+ + +SI L
Sbjct: 107 RGVPERIV------YVRGTCDDVAKAYGMIVRALLEEHG------NEDNGEDIEISINLL 154
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ +GC+ G S + E+ED++ + + +L ND ++ I+G
Sbjct: 155 IPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS----NDRILTING 201
>gi|256078997|ref|XP_002575778.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043991|emb|CCD81537.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 373
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 98 VVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 155
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 156 AKQMI-GDIIERAGKNGTPTTPAYNSTGSITTIEMMVPG----------------LKAGL 198
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 199 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAV 250
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 148/380 (38%), Gaps = 81/380 (21%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
P N+P DV R++C ++G G+ IS I+ +T RI+ G R++ V
Sbjct: 59 SPDNVPSDV-HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVR 117
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-GDDVAY-CGL 133
G+ C+ +V+ ++R E G+ D G+D+ L
Sbjct: 118 GT---------CD--------DVAKAYGMIVRAL-------LEEHGNEDNGEDIEISINL 153
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
L +G ++GK G + + S AK+ P + +D+++ I G A+ A
Sbjct: 154 LIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS-NDRILTINGVPDAIHIATFY 212
Query: 194 VTTCLQHLS----------TMEKSPICFNRPI------EKVFYSNS-----SDPHREFFP 232
++ L + ++ P FN + +F+ + SD + P
Sbjct: 213 ISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKP 272
Query: 233 HLSL----------VPPLTGNPSDNASEFHSSSADAD---------RDHPG--LDKKGRK 271
+ +L P T NA+ F + + PG L +
Sbjct: 273 NKNLPISSTXLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQ 332
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
QE+ + F G +IGK G + S++ ++G I P+ S ER +TI ++ +
Sbjct: 333 QEIFIDEKFVG----NVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG-TFMAS 387
Query: 332 RHSPVQNAAVLVFARSVEVE 351
+ AA+++ + +E++
Sbjct: 388 Q------AAIMLISNKIEID 401
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S +D D D P +V LRML AS I+G +GA + +++ + A I+ + +
Sbjct: 51 SHSDNDHDSPD----NVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNI 106
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI--L 371
ER+V Y+ V A ++ +E G E+ G+ + +SI L
Sbjct: 107 RGVPERIV------YVRGTCDDVAKAYGMIVRALLEEHG------NEDNGEDIEISINLL 154
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ +GC+ G S + E+ED++ + + +L ND ++ I+G
Sbjct: 155 IPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS----NDRILTING 201
>gi|100816392|ref|NP_003925.1| far upstream element-binding protein 3 [Homo sapiens]
gi|297685554|ref|XP_002820351.1| PREDICTED: far upstream element-binding protein 3 [Pongo abelii]
gi|37078499|sp|Q96I24.2|FUBP3_HUMAN RecName: Full=Far upstream element-binding protein 3;
Short=FUSE-binding protein 3
gi|119608343|gb|EAW87937.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|119608344|gb|EAW87938.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|187950609|gb|AAI37339.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|187951661|gb|AAI37341.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|194379238|dbj|BAG58170.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 111 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 147
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 148 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 207
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 208 A---DKPLRITGDAFKVQQA 224
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 255 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 314
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+++++ E + V G ++ Y K G+V+G
Sbjct: 315 HIISELILTAQERDGFGGLAAARGRGRGRGDWSVGAPGGVQEITYT---VPADKCGLVIG 371
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 372 KGGENIKSINQQSGAHVELQRNPPP 396
>gi|332833136|ref|XP_520317.3| PREDICTED: far upstream element-binding protein 3 [Pan troglodytes]
gi|397503629|ref|XP_003822422.1| PREDICTED: far upstream element-binding protein 3 [Pan paniscus]
gi|410219718|gb|JAA07078.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410292988|gb|JAA25094.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410350985|gb|JAA42096.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
Length = 572
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 111 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 147
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 148 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 207
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 208 A---DKPLRITGDAFKVQQA 224
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 148/380 (38%), Gaps = 81/380 (21%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
P N+P DV R++C ++G G+ IS I+ +T RI+ G R++ V
Sbjct: 59 SPDNVPSDV-HLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVR 117
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-GDDVAY-CGL 133
G+ C+ +V+ ++R E G+ D G+D+ L
Sbjct: 118 GT---------CD--------DVAKAYGMIVRAL-------LEEHGNEDNGEDIEISINL 153
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
L +G ++GK G + + S AK+ P + +D+++ I G A+ A
Sbjct: 154 LIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS-NDRILTINGVPDAIHIATFY 212
Query: 194 VTTCLQHLS----------TMEKSPICFNRPI------EKVFYSNS-----SDPHREFFP 232
++ L + ++ P FN + +F+ + SD + P
Sbjct: 213 ISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLSYKP 272
Query: 233 HLSL----------VPPLTGNPSDNASEFHSSSADAD---------RDHPG--LDKKGRK 271
+ +L P T NA+ F + + PG L +
Sbjct: 273 NKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMNFVQ 332
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
QE+ + F G +IGK G + S++ ++G I P+ S ER +TI ++ +
Sbjct: 333 QEIFIDEKFVG----NVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG-TFMAS 387
Query: 332 RHSPVQNAAVLVFARSVEVE 351
+ AA+++ + +E++
Sbjct: 388 Q------AAIMLISNKIEID 401
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
S +D D D P +V LRML AS I+G +GA + +++ + A I+ + +
Sbjct: 51 SHSDNDHDSPD----NVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNI 106
Query: 314 TKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI--L 371
ER+V Y+ V A ++ +E G E+ G+ + +SI L
Sbjct: 107 RGVPERIV------YVRGTCDDVAKAYGMIVRALLEEHG------NEDNGEDIEISINLL 154
Query: 372 VGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ +GC+ G S + E+ED++ + + +L ND ++ I+G
Sbjct: 155 IPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLS----NDRILTING 201
>gi|257206622|emb|CAX82939.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 97 VVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 154
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 155 AKQMI-GDIIERAGKNGTPTTTTYNSTGSITTIEMMVPG----------------LKAGL 197
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 198 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEKARQAV 249
>gi|402896286|ref|XP_003911235.1| PREDICTED: far upstream element-binding protein 3 [Papio anubis]
Length = 572
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 111 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 147
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 148 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 207
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 208 A---DKPLRITGDAFKVQQA 224
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 60 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 108
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 109 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 156
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 157 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 208
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + E + S H P L+L G ++S + P
Sbjct: 209 KKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 260
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 261 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 320
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 321 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 369
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 370 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 425
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 426 QQHQKGQ-SNQAQAR 439
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 171/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A T + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACATA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 345 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG 404
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 405 YFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 464
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 465 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 513
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 570
Query: 430 ALSEV 434
A ++
Sbjct: 571 AQRKI 575
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 30/193 (15%)
Query: 9 GYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD 68
GY KR P V R + P+ + G +IG+ G+ I S+R D C+++
Sbjct: 124 GYGQKRDEP------GVGHRFLIPSKMAGAVIGKGGTTIKSLRSDFACQLN--------- 168
Query: 69 HRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV 128
V + +R + F V E VS E V + + D D D
Sbjct: 169 -----VPDAQGPERVLRF-----VCEDSNVSPLIEKVGNLLRNDMVERNRAQADSDID-- 216
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVK 188
+L + +K G V+G G + +R ++G KI + PA + D+LI++ G +
Sbjct: 217 --MRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQDPAPHS-SDRLIKVAGQPDKIA 273
Query: 189 KALVAVTTCLQHL 201
+ L +
Sbjct: 274 TCFGEILLILNDI 286
>gi|413921493|gb|AFW61425.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 699
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH---RVILVVGS-GSI 80
+S + P VG LIG++G I +++ + +I + R + +VG+ GS+
Sbjct: 147 ISRMIEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGTLGSV 206
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D+ + ++ V+ E E + + R F + E + K+
Sbjct: 207 DKAELLIKS-VIAEA-EAGGSPALIARGFGSGQPGSEQFE------------MTVPDNKV 252
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITG 182
G+++GKGG + M+ +SGA+I ++P PP + ++++++TG
Sbjct: 253 GLIIGKGGDAIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTG 296
>gi|383873059|ref|NP_001244672.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|380787701|gb|AFE65726.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|383414151|gb|AFH30289.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|384950158|gb|AFI38684.1| far upstream element-binding protein 3 [Macaca mulatta]
Length = 572
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 111 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 147
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 148 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 207
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 208 A---DKPLRITGDAFKVQQA 224
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 179/443 (40%), Gaps = 63/443 (14%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 134 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 177
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I + ST E + + E+ + D D +
Sbjct: 178 KENAGAAEKAI------------SIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKI 225
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK ++
Sbjct: 226 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGSI-- 277
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
C M+K + E + S H P L+L G ++S
Sbjct: 278 ENCCRAEQEIMKKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPP 329
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
+ P +QE + + IIGK+G ++ L + A I A P
Sbjct: 330 PPSSVSGAAPYSSFMPPEQET-VHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 388
Query: 314 T-KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
T S R+V I+ + A ++ + E + F G + + I V
Sbjct: 389 TPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRV 437
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KNVQN 429
A G + G G V+E++++T ++ +V +Q Q V+++I G + + Q
Sbjct: 438 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPDENEQ--VIVKIIGHFYASQMAQR 494
Query: 430 ALSEVVGRLRHNLKSGEILNEAR 452
+ +++ +++ + G+ +AR
Sbjct: 495 KIRDILAQVKQQHQKGQSQTQAR 517
>gi|226477992|emb|CAX72689.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 97 VVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 154
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 155 AKQMI-GDIIERAGKNGTPTTTTYNSTGSITTIEMMVPG----------------LKAGL 197
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 198 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEKARQAV 249
>gi|223947885|gb|ACN28026.1| unknown [Zea mays]
gi|224031081|gb|ACN34616.1| unknown [Zea mays]
gi|413921492|gb|AFW61424.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 706
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDH---RVILVVGS-GSI 80
+S + P VG LIG++G I +++ + +I + R + +VG+ GS+
Sbjct: 154 ISRMIEVPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGTLGSV 213
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
D+ + ++ V+ E E + + R F + E + K+
Sbjct: 214 DKAELLIKS-VIAEA-EAGGSPALIARGFGSGQPGSEQFE------------MTVPDNKV 259
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITG 182
G+++GKGG + M+ +SGA+I ++P PP + ++++++TG
Sbjct: 260 GLIIGKGGDAIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTG 303
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G ++G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 140 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGNPEGIQ 194
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSD--------PHREFFPHLSLVPPL 240
KA+ + CL + +N P+ + NS RE+ +
Sbjct: 195 KAIWEICKCLVDDWARGTGTVLYN-PMVRTQTGNSGGMSQGNVGGTGREYGSSRVM---R 250
Query: 241 TGNPSD------NASEFHSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGK 291
TGN +D + S S A R P D+ G + Q +++ G IIG+
Sbjct: 251 TGNGADFSESAPRSYNRRSESDAAQRGPPTHDENGEELQTQNISIPADMVGC----IIGR 306
Query: 292 RGAIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEV 350
G+ + ++ SGA IS A +P ++GER+ TI + ++A+ + ++E
Sbjct: 307 AGSKISEIRKTSGARISIAKSPHDETGERMFTIMGT-------AKANDSALYLLYENLEA 359
Query: 351 EGQQ 354
E Q+
Sbjct: 360 EKQR 363
>gi|393907134|gb|EFO25357.2| hypothetical protein LOAG_03127 [Loa loa]
Length = 341
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 32/219 (14%)
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQ 179
+GD + +L +++ G V+G+ G + M+ E G ++ + PP Q
Sbjct: 109 EGDSNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPP----------Q 158
Query: 180 ITGATLAVKKALVAVTTCLQHLSTMEKS-PIC-FNRPIEKVFYSNS-SDPHREFFPHLSL 236
T +++K A + C+ H+ M K PI +P E +FY S S + + P +
Sbjct: 159 STERVVSIKGAPDKIIACVNHIMNMLKEIPIKGVTKPYESMFYDPSYSAEYGGYPPDRNY 218
Query: 237 VPPLTGNPSDNASEFHSSSADADRDHP-GLDKKGRKQEVAL----------RMLFSGWTA 285
P+ P +S + R+ P + +G VAL ++
Sbjct: 219 RGPMIRGPM-----AMTSYGNYGRNFPRQIGGRGPLSAVALPPYMGPEESTQVTIPNELG 273
Query: 286 SGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
IIGK G + ++ SGA I P +SGER++TI+
Sbjct: 274 GTIIGKGGERINRVREESGAQI-VVGPQQESGERIITIT 311
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G ++GKGG + R+R ESGA+IV+ P +++I ITG + A++ A + C++
Sbjct: 274 GTIIGKGGERINRVREESGAQIVVGPQQESG---ERIITITGTSTAIQTAQYLLQQCVRQ 330
>gi|341893250|gb|EGT49185.1| hypothetical protein CAEBREN_32371 [Caenorhabditis brenneri]
Length = 430
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 82/217 (37%), Gaps = 56/217 (25%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D +S +++ P+ VG +IG+ G + +++ D CR+ +PG+ R+ LV G
Sbjct: 41 DHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKG--- 97
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV---------AY 130
R+ ++ V E + + E D G+D +
Sbjct: 98 ---RL------------------NNIMAVIESIQDKIREKCADQAGNDAFDHKNTSRGSE 136
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ T G+V+GK G N+ +R +I + P L ++ +A
Sbjct: 137 IKIVMPNTSAGMVIGKSGANIKDIREHFSCQIQVYPKAGSVEAKTSLERVVTVAHEESQA 196
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPH 227
L+ + R +EKV +SDPH
Sbjct: 197 LLQAAS----------------RVLEKV----ASDPH 213
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI-----SALE 327
++ LR+L A IIGK G + L+ A ++ P ER++TI +AL+
Sbjct: 24 DIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVT--VPDCPGPERILTIISSNDNALK 81
Query: 328 YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSA 387
L +++ F R GQ + + D V V +LV GC+ G G
Sbjct: 82 VLGEVMGNLEDGGSR-FKRGGAGGGQGNNDNQGGETD-VDVRMLVHQSQAGCIIGKGGLK 139
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
V E+ + TG+ IK+ C D V+QI+G+ + + EV+ L+
Sbjct: 140 VKELREKTGSRIKIY----TSCCPMSTDRVVQITGKPNTCSDCVREVLDLLK 187
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI---HCEGGFPGSDHRVILVVGS 77
PDD+ R++ P+ V G +IG+ G IS +R D + C G R++ ++ S
Sbjct: 22 PDDI-ELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCPG-----PERILTIISS 75
Query: 78 GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY-CGLLAN 136
+++ GEV E F+R + D G + +L +
Sbjct: 76 NDNALKVL----------GEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVH 125
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG 182
++ G ++GKGG V +R ++G++I + C D+++QITG
Sbjct: 126 QSQAGCIIGKGGLKVKELREKTGSRIKIY-TSCCPMSTDRVVQITG 170
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 52/320 (16%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+++ R + + G +IG++G ++ +R +T + PG RV+ V G
Sbjct: 37 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGP------ 90
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDG--DGDDVAYCGLLANTTKIG 141
+ T A V + + E ++ G + + LL + ++G
Sbjct: 91 --------------LQGTARAYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMG 136
Query: 142 VVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
++G+ G + ++ SG ++V MLP ++++++ G ++KA+ + C
Sbjct: 137 TIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAVWEIGKC 191
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEF------ 251
L I +N + ++S S P N + N ++F
Sbjct: 192 LIDDWQRGTGTILYNPAVRASVGGSTSMNTSSVGNGYSSRPY---NRTGNGADFSDGQSG 248
Query: 252 ----HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
S+ ++R +P + + G + Q +++ G IIG+ G+ + ++ +SG
Sbjct: 249 GYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGC----IIGRGGSKITEIRRSSG 304
Query: 305 ALISFA-APLTKSGERVVTI 323
A IS A AP ++GER+ TI
Sbjct: 305 ARISIAKAPHDETGERMFTI 324
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 6/167 (3%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
RML IIG +G VR L + A + + E+ V I E + P
Sbjct: 57 FRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPEEPLPP 116
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
+A + V+ +++ E S G + ILV ++ L G ++ + + +
Sbjct: 117 AMDALLRVYQQTINDESLDVGSDG-----VIVRRILVPSEQAESLIGEHGVMINSIMEAS 171
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
TDI+++ G+ + A + D V++I G V AL V LR L
Sbjct: 172 QTDIRVLDGD-LPPVALEEDRVVEIWGLPARVHKALELVASHLRKYL 217
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 257 DADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKS 316
+AD + K+ R+ + +R+L A IIGK G + L++ A S P
Sbjct: 4 EADGEMGSPQKRSRRGDEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKA--SITVPDCPG 61
Query: 317 GERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADF 376
ER++T+S+ LDT + N V E + G G+ + + +++
Sbjct: 62 PERMLTLSS--DLDT----ICNIVTDVVPNLEE-------NGGRVNGNELDLRMMIHQSQ 108
Query: 377 VGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN-DVVIQISGEYKNVQNALSEVV 435
GC+ G + E+ + TG IK+ A Q+ D +IQI GE +++ E++
Sbjct: 109 AGCVIGKAGYKIKELREKTGARIKIFS-----NVAPQSTDRIIQIVGEPSKCVDSIREII 163
Query: 436 GRLRHNLKSGEILNEARPRS 455
++ N G I+N P +
Sbjct: 164 TLIKSNPIKG-IVNPYDPHN 182
>gi|76157738|gb|AAX28573.2| SJCHGC01935 protein [Schistosoma japonicum]
Length = 263
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 97 VVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 154
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 155 AKQMI-GDIIERAGKNGTPTTTTYNSTGSITTIEMMVPG----------------LKAGL 197
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 198 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEKARQAV 249
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI-----SALE 327
++ LR+L A IIGK G + L+ A ++ P ER++TI +AL+
Sbjct: 22 DIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVT--VPDCPGPERILTIISSNDNALK 79
Query: 328 YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSA 387
L +++ F R GQ + + D V V +LV GC+ G G
Sbjct: 80 VLGEVMGNLEDGGSR-FKRGGAGGGQGNNDNQGGETD-VDVRMLVHQSQAGCIIGKGGLK 137
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
V E+ + TG+ IK+ C D V+QI+G+ + + EV+ L+
Sbjct: 138 VKELREKTGSRIKIY----TSCCPMSTDRVVQITGKPNTCSDCVREVLDLLK 185
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 21/166 (12%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI---HCEGGFPGSDHRVILVVGS 77
PDD+ R++ P+ V G +IG+ G IS +R D + C G R++ ++ S
Sbjct: 20 PDDI-ELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCPG-----PERILTIISS 73
Query: 78 GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY-CGLLAN 136
+++ GEV E F+R + D G + +L +
Sbjct: 74 NDNALKVL----------GEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVH 123
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG 182
++ G ++GKGG V +R ++G++I + C D+++QITG
Sbjct: 124 QSQAGCIIGKGGLKVKELREKTGSRIKIY-TSCCPMSTDRVVQITG 168
>gi|256078993|ref|XP_002575776.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043993|emb|CCD81539.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 356
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS-GSIDR 82
VV+ P VG +IG+ G I+ ++ DT+C++ G+ R + + G+ ID
Sbjct: 98 VVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDH 155
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
D++ G+ + + +E V G K G+
Sbjct: 156 AKQMI-GDIIERAGKNGTPTTPAYNSTGSITTIEMMVPG----------------LKAGL 198
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
V+GK G + ++ E+G K+V++ +D+ ++I+G V+KA AV
Sbjct: 199 VIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAV 250
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 26/183 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSID 81
S R+ P+ VG +IG+ G I +I+ + +I + P S R + ++G+
Sbjct: 86 TSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGTSEQI 145
Query: 82 RRIMFCENDVVVE---GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
R NDV+ E GG SS + + V D
Sbjct: 146 SRAEELINDVIAETDAGGSASSAVHGLNTKQPGAEQFSIRVPND---------------- 189
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGATLAVKKALVAVT 195
K+G+++GKGG + M+ SGA++ ++P PP ++ + I G T ++ A V
Sbjct: 190 KVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDPTT-ERTVYINGLTEQIEAAKELVN 248
Query: 196 TCL 198
L
Sbjct: 249 DVL 251
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 111 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 147
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +DV LL +K+G+V+GKGG + +++ +G K+VM+ P P
Sbjct: 148 CRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTG 207
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V+ A
Sbjct: 208 A---DKPLRITGDPFKVQVA 224
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 82 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 130
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 131 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 178
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 179 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 230
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + E + S H P L+L G ++S + P
Sbjct: 231 KKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 282
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 283 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 342
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 343 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 391
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 392 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 447
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 448 QQHQKGQ-SNQAQAR 461
>gi|440636503|gb|ELR06422.1| hypothetical protein GMDG_02138 [Geomyces destructans 20631-21]
Length = 365
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 125/320 (39%), Gaps = 55/320 (17%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG++G ++ +R +T + G R++ + G +
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRILTITGGCDAISKA 107
Query: 85 MFCENDVVVEG-------GEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
++EG G VS+T I+ LL +
Sbjct: 108 YAIVAKALLEGAPMMGMGGLVSTTGTHPIK-------------------------LLISH 142
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVA 193
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+
Sbjct: 143 NQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQKAIWE 197
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEF-- 251
+ CL + +N + E + S TGN +D + E
Sbjct: 198 MCKCLIDDWERGTGTVLYNPVVRTQTGGGQGGIRNEGREYSSPRVMRTGNGADFSQEAPR 257
Query: 252 ----HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
S A R P D+ G + Q +++ G IIG+ G+ + ++ SG
Sbjct: 258 TFNRRSDGETAGRGVPTHDENGEEIQTQNISIPSDMVGC----IIGRGGSKISEIRKTSG 313
Query: 305 ALISFA-APLTKSGERVVTI 323
A IS A AP +GER+ TI
Sbjct: 314 ARISIAKAPHDDTGERMFTI 333
>gi|82540955|ref|XP_724754.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii 17XNL]
gi|23479512|gb|EAA16319.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii]
Length = 338
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 128/310 (41%), Gaps = 49/310 (15%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRI 84
+++ V G +IG++G IIS I T C + FP + RV+++ G
Sbjct: 22 KMLINNLVAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKRVLVICGKK------ 75
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY-CGLLANTTKIGVV 143
V+ + +++ ++ + + Y C ++ + + +
Sbjct: 76 --------------KQINNVVLIILDKIRQISSLANNKNEKKIKTYTCRIVVPKSAVSAI 121
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG + +++ ++G KI + C + +++I I G+ ++K V +Q
Sbjct: 122 IGKGGYQIKQLQNKTGTKI-QVSNREC-GLYERIITIVGSFASIKDTATKVIEAIQTDPN 179
Query: 204 MEK-SPICFNRP--IEKVFYSNSSDPHRE----FFPHLSLVPPLTGNPSDNASEFHSSSA 256
++ + +N+ IE + N+ + ++ F H+ + L P H
Sbjct: 180 LKDLLNVNYNKELNIETITKINNRNYIKKFSHNFINHVHMNRYLI--PQQYGIFQHEHYV 237
Query: 257 DAD------RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
DA+ R++ L + + + F G +IGK G+ + ++ N++GA I
Sbjct: 238 DANMINYLMRNNRDLFNLQCEISIEIPDKFIG----SVIGKNGSRLTNIMNSTGAKI--- 290
Query: 311 APLTKSGERV 320
++K GE +
Sbjct: 291 -KISKKGELI 299
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 82/183 (44%), Gaps = 15/183 (8%)
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTISAL 326
R Q ++ML + A IIGK G I+ ++N +G + + + + +RV+ I
Sbjct: 15 RTQLCFVKMLINNLVAGSIIGKNGEIISGIENKTGCSLKLSPNNSFFPNTQKRVLVICG- 73
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
+ + N +++ + ++ + E K I+V V + G G
Sbjct: 74 -----KKKQINNVVLIILDKIRQISSLAN-NKNEKKIKTYTCRIVVPKSAVSAIIGKGGY 127
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
+ ++++ TGT I++ E C + +I I G + ++++ ++V+ ++ + +
Sbjct: 128 QIKQLQNKTGTKIQVSNRE----CGLY-ERIITIVGSFASIKDTATKVIEAIQTDPNLKD 182
Query: 447 ILN 449
+LN
Sbjct: 183 LLN 185
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 261 DHPGLDKKGRKQE-----------VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
HP + GR+ E + +R+L G IIGK+G V+ ++ SGA I+
Sbjct: 22 SHPPQPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
+ ER+VTI+ + + A++ + ++ S +K V +
Sbjct: 82 SE--GNCPERIVTITG-----PTDAIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLR 133
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
++V A G L G G S + E+ + TG +++ G E+ + + D +IQ
Sbjct: 134 LVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 133/350 (38%), Gaps = 83/350 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI-----------SALEYLDTRHSPV-- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPP 255
Query: 337 ---QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAV 388
N A L S E + G SSG + + + + D +GC+ G + +
Sbjct: 256 LGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKI 315
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
+E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 NEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 360
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 138/332 (41%), Gaps = 75/332 (22%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+++ R + + G +IG+SG ++ +R +T + PG RV+ V G
Sbjct: 42 MLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGP------ 95
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTT 138
++ T A V + + E ++ G G V+ G LL +
Sbjct: 96 --------------LNGTARAYALVAKGLLEGAPQM---GMGGIVSNNGTHPVRLLISHN 138
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAV 194
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+ +
Sbjct: 139 QMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAVWEI 193
Query: 195 TTCLQHLSTMEKSPICFNRPI--------------EKVFYSNSSDPHREFFPHLSLVPPL 240
CL I +N + + V +S P+
Sbjct: 194 GKCLIDDWQRGTGTILYNPAVRASVGTTTSTSTMNQSVGNGYNSRPYNR----------- 242
Query: 241 TGNPSDNASEF-----HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKR 292
TGN +D + + S+ ++R +P + + G + Q +++ G IIG+
Sbjct: 243 TGNGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGC----IIGRG 298
Query: 293 GAIVRSLQNASGALISFA-APLTKSGERVVTI 323
G+ + ++ +SGA IS A AP ++GER+ TI
Sbjct: 299 GSKITEIRRSSGARISIAKAPHDETGERMFTI 330
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ GS
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSL 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++ + E + +V+ +L +
Sbjct: 102 EAIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ E G+ + + ++ ++ I + G + AL+ + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCITVIGEKENNRNALMMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ S C N V Y++ S P + P
Sbjct: 207 AKVADDPHSGTCPN-----VSYADVSGPVANYNP 235
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ GS
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSL 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++ + E + +V+ +L +
Sbjct: 102 EAIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ E G+ + + ++ ++ I + G + AL+ + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCITVIGEKENNRNALMMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ S C N V Y++ S P + P
Sbjct: 207 AKVADDPHSGTCPN-----VSYADVSGPVANYNP 235
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 172/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 129 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 177
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 178 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 225
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK A+ A + + M+K
Sbjct: 226 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGAVEACASA--EVEIMKK 277
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 278 LREAFENDMLAVHQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPTAPYHPFATHSG 337
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 338 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 397
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 398 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 446
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 447 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 503
Query: 430 ALSEV 434
A ++
Sbjct: 504 AQRKI 508
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 135/326 (41%), Gaps = 62/326 (19%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG+ G ++ +R +T + G RV+ + G
Sbjct: 50 LTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTITGG------- 102
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD---GDGDDVAYCG-----LLAN 136
CE +S AV R +EG G G + G LL +
Sbjct: 103 --CE--------AISRAYAAVARSL---------LEGAPTMGMGGVIQNNGTHPIKLLIS 143
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
++G ++G+ G + ++ SG ++V MLP ++++++ G +++A+
Sbjct: 144 HNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQRAVW 198
Query: 193 AVTTCL-----QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD- 246
+ CL + T+ +P+ + + S S ++ P+ TGN +D
Sbjct: 199 EICKCLVDDWQRGTGTVLYNPVVRTQGVGAPGISGGSGYVQDRAPYGGSRVTRTGNGADF 258
Query: 247 -----NASEFHSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRS 298
+ S S ++R P D+ G + Q +++ G IIG+ G+ +
Sbjct: 259 SNGGPRSYNRRSDSDPSNRGPPTHDENGEEIQTQNISIPADMVGC----IIGRAGSKISE 314
Query: 299 LQNASGALISFA-APLTKSGERVVTI 323
++ SGA IS A AP ++GER+ TI
Sbjct: 315 IRKTSGARISIAKAPHDETGERMFTI 340
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPT------ 69
Query: 334 SPVQNAAVLVFARSVEVEGQ----QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVS 389
+ + A L+ + E Q QG SG + + ++V A G L G G S +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQG--SGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
E+ +VTG I++ +L + + V ISG + + + + + + G +
Sbjct: 128 EIREVTGASIQVA--SDMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGATI- 182
Query: 450 EARPRSPSGRVGGPAL 465
P P +VGGP +
Sbjct: 183 ---PYRPKPQVGGPVI 195
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 31/191 (16%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG-SGS 79
P ++ RL+ VG +IG+ G I+ R ++ +I+ G R++ V G + S
Sbjct: 14 PSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTNS 71
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-GDDVAYCGLLANTT 138
I + + + FE +++G G L+ +
Sbjct: 72 IFKAFTL------------------ICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPAS 113
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+ G ++GKGG + +R +GA I + D L T + + A+T C+
Sbjct: 114 QCGSLIGKGGSKIKEIREVTGASIQV--------ASDMLPNSTERAVTISGTSEAITQCI 165
Query: 199 QHL-STMEKSP 208
H+ M +SP
Sbjct: 166 YHICCVMLESP 176
>gi|193083019|ref|NP_001122343.1| far upstream element-binding protein [Ciona intestinalis]
gi|70569713|dbj|BAE06462.1| Ci-FUSE [Ciona intestinalis]
Length = 325
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
D++S + P +VG +IGR G I ++R+T CRI PG+ R + G+
Sbjct: 46 DIMSDTIRLPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIPGTKERPCTLSGT---QE 102
Query: 83 RIMFCE---NDVVVE------GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+I C N+++ G + +Q + + + E E+ D
Sbjct: 103 QIEVCRNMLNEIISRSQAGTLGSNFNLSQGGLGGMGDGGMEKSIEIAVPPD--------- 153
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
K G+++GKGG + ++ G K++++ + ++ITG L V A+ A
Sbjct: 154 -----KCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDNIGQSKPLRITGPQLNVDNAVSA 208
Query: 194 V 194
V
Sbjct: 209 V 209
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ GS
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSL 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++ + E + +V+ +L +
Sbjct: 102 EAIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ E G+ + + ++ ++ I + G + AL+ + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCITVIGEKENNRNALMMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ S C N V Y++ S P + P
Sbjct: 207 AKVADDPHSGTCPN-----VSYADVSGPVANYNP 235
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 23/214 (10%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSG 78
D +++ P G +IG+ G I+ +++DT R+ +PG+ RV L+ GS
Sbjct: 42 DGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSL 101
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTT 138
+M D + E +++ + E + +V+ +L +
Sbjct: 102 EAIMAVMDFIMDKIREKPDLTLKTTVDFESGKTTAERDKQVK------------ILVPNS 149
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GK G + +++ E G+ + + ++ ++ I + G + AL+ + L
Sbjct: 150 TAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCITVIGEKENNRNALMMI---L 206
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFP 232
++ S C N V Y++ S P + P
Sbjct: 207 AKVADDPHSGTCPN-----VSYADVSGPVANYNP 235
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF---PGSDHRVILVVGSGSIDRRI 84
++ P VG +IG+SG I ++ + +I PGS R + + G+ R
Sbjct: 146 KIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTPEQISRA 205
Query: 85 MFCENDVVVEG-----GEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
DV+ E G VS+ + + ++++ +AN K
Sbjct: 206 EELIRDVLAEADAGSSGTVSNRKYNAPQPGAEQFQMQ-----------------IANN-K 247
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLP---PPACAAIDDQLIQITGAT--LAVKKALVAV 194
+G+V+GKGG + M+ +SGA+I ++P PP + + L I G T + + K LVA
Sbjct: 248 VGLVIGKGGETIKSMQAKSGARIQVIPLHLPPGDTSTERTLY-IDGTTDQIEIAKQLVAE 306
Query: 195 TTC 197
T
Sbjct: 307 VTS 309
>gi|355567401|gb|EHH23742.1| hypothetical protein EGK_07278, partial [Macaca mulatta]
gi|355752991|gb|EHH57037.1| hypothetical protein EGM_06596, partial [Macaca fascicularis]
Length = 544
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 23 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 82
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 83 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 119
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 120 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 179
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 180 A---DKPLRITGDAFKVQQA 196
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 17/208 (8%)
Query: 258 ADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSG 317
A D GL + +R+L +G IIGK+G IV+ + SGA I+ +
Sbjct: 2 ATVDSKGLPHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISD--GSCP 59
Query: 318 ERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFV 377
ER+VTI T + A + + +E E + + + +++ A
Sbjct: 60 ERIVTI-------TGTTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQC 112
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGR 437
G L G G S + E+ ++TG + +V E + + + +SG + + +
Sbjct: 113 GSLIGKGGSKIKEIREITGASV-VVASEML---PNSTERAVTVSGTSDAITQCIYHICCV 168
Query: 438 LRHNLKSGEILNEARPRSPSGRVGGPAL 465
+ + G + P P +VGGP +
Sbjct: 169 MLESPPKGATI----PYRPKPQVGGPVI 192
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P + P ++ RL+ VG +IG+ G I+ R ++ RI+ +
Sbjct: 10 PHDAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARIN---------------IS 54
Query: 77 SGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA----YC 131
GS RI+ ++ T +A+ + F + + +E EV G G +
Sbjct: 55 DGSCPERIV-----------TITGTTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITL 103
Query: 132 GLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL 191
L+ ++ G ++GKGG + +R +GA +V+ + L T + V
Sbjct: 104 RLIMPASQCGSLIGKGGSKIKEIREITGASVVVA--------SEMLPNSTERAVTVSGTS 155
Query: 192 VAVTTCLQHL-STMEKSP 208
A+T C+ H+ M +SP
Sbjct: 156 DAITQCIYHICCVMLESP 173
>gi|443700302|gb|ELT99335.1| hypothetical protein CAPTEDRAFT_173082 [Capitella teleta]
Length = 552
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSID 81
+S +++ P+ G +IG+ G I+ I+++T + +PG+ RV LV G+
Sbjct: 46 ISLKVLVPSIAAGAIIGKGGETITDIQKETGATVKMSKNNDFYPGTSERVCLVNGT---- 101
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVE------AEVEGDGDGDDVAYCGLLA 135
+ S ++ ++ + ER+ E E E + + +L
Sbjct: 102 ----------------LDSVRKVIVFIMERIREKPDPNPKPCEGEMKANYERHKQMKILV 145
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVT 195
+ G+V+GKGG + +++ +SGA + + ++ ++ + I G T ++A+ V
Sbjct: 146 PNSTAGMVIGKGGAFIRQIKDDSGAYVQVSQKSKDMSLPERCVTIAGDTEQNREAIDLV- 204
Query: 196 TCLQHLSTMEKSPICFN 212
L+ + +S C N
Sbjct: 205 --LEKIMEDPQSASCPN 219
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGS 77
P S P +VG +IGR G IS +++++ C+I GG P D V L
Sbjct: 84 PPRSTSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMP--DRSVTLTGLP 141
Query: 78 GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
SI + + + + E+ A DG G V ++
Sbjct: 142 ESI------------------QTAKRLLTEIVEKGRPAPAFHHNDGPGMTVQE--IMVPA 181
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
+K G+V+GKGG + ++ +G K+VM+ D+ ++I+G V++A V
Sbjct: 182 SKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFKVQQAKEMVMEL 241
Query: 198 LQHLSTMEK 206
++ E+
Sbjct: 242 IRDQGFREQ 250
>gi|147905884|ref|NP_001082897.1| far upstream element-binding protein 2 [Danio rerio]
gi|141795754|gb|AAI39702.1| MGC163038 protein [Danio rerio]
Length = 666
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 31 CPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFC 87
P +VG +IGR G I+ I++D+ C++ GG P D V + G +I + M
Sbjct: 113 VPDGMVGLIIGRGGEQINKIQQDSGCKVQIAPDSGGLP--DRSVSITGGPEAIQKAKMML 170
Query: 88 ENDVVVEG-GEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
+D+V G G S E+ G G + ++ K G+++GK
Sbjct: 171 -DDIVSRGRGTPPSFHES--------------TNGSGHMQE-----MVIPAGKAGLIIGK 210
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
GG + +++ +G K++++ + D+ ++I G V++A V L+
Sbjct: 211 GGETIKQLQERAGVKMILIQDASQGPNMDKPLRIIGDPYKVQQAREMVQEILRE 264
>gi|313229072|emb|CBY18224.1| unnamed protein product [Oikopleura dioica]
gi|313246840|emb|CBY35700.1| unnamed protein product [Oikopleura dioica]
Length = 293
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 67/164 (40%), Gaps = 32/164 (19%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P G +IG+ G I+ +++D+ I +PG+ R+ LV G +
Sbjct: 100 LKILVPAYAAGSIIGKCGQTITQLQKDSGAVIKLSKAKDFYPGTTERIGLVTGDAA---- 155
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWE--VEAEVEGD---GDGDDVAYCGLLANTT 138
A+ V+ M E E V D +GD ++ T
Sbjct: 156 --------------------ALKHVYRFMTEKTFEFPVPKDMAIQNGDRHKQAKIIVPNT 195
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG 182
G+++GK G + + +GAK+ + P + +++I +TG
Sbjct: 196 TAGLIIGKAGATIKHIMESTGAKVQLSQKPEQINLQERVITVTG 239
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 39/217 (17%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G ++G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 138 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQ 192
Query: 189 KALVAVTTCL-----QHLSTMEKSPICFNRPIEKVF-------YSNSSDPHREFFPHLSL 236
+A+ + CL + T+ +P+ +P YS S P +
Sbjct: 193 RAVWEICKCLVDDWQRGTGTVLYNPVVRTQPASSTSVGSGGAGYSQGSGRSEYGSPRVMR 252
Query: 237 VPPLTGNPSD---NASEFHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASG 287
TGN +D +S ++ +D+D R P D+ G + Q +++ G
Sbjct: 253 ----TGNGADFSNGSSRPYNRRSDSDAAIRGPPTHDENGEEIQTQNISIPADMVGC---- 304
Query: 288 IIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
IIG+ G+ + ++ SGA IS A AP ++GER+ TI
Sbjct: 305 IIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTI 341
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 181/436 (41%), Gaps = 62/436 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHP- 263
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVT 322
G + +QE+ +++ IIGK+G ++ L + A I A P T S R+V
Sbjct: 397 GSFMQAPEQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I+ + A ++ + E + F G + + I V A G + G
Sbjct: 456 ITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIG 504
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRL 438
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ ++
Sbjct: 505 KGGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQV 560
Query: 439 RHNLKSGEILNEARPR 454
+ + G+ N+A+ R
Sbjct: 561 KQQHQKGQ-SNQAQAR 575
>gi|401841852|gb|EJT44175.1| hypothetical protein SKUD_201111 [Saccharomyces kudriavzevii IFO
1802]
Length = 328
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA-LISFAAPLTKSGERVVTISALE 327
+ Q R+LFS S IIGK GA+++ L + + +++ L S +RV+ + L
Sbjct: 131 NKNQVTTTRLLFSNSAISAIIGKNGAVIKKLMHENDLRILASKHYLPDSEDRVLELQGLP 190
Query: 328 YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-------------NKGDAVAVSILVGA 374
S + NA + + ++E + FS + ++ ++++
Sbjct: 191 ------SAIGNAWLQISQLNMEPRSENPFSERKYSPHLAKALRGSADRAAEFRSTVMIPE 244
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+FVG L G G + ++ + T T I + + ++Q + + +NVQ A
Sbjct: 245 EFVGALVGRGGNRIANLRKYTKTKILIESQDSAKETSSQKRTFVIVGNLERNVQIA 300
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 28 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 87
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 88 VHSFIAEKVREIPQ-AMTKPEVVNILQP--------QTTMNPDRAKQAKLIVPNSTAGLI 138
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ L S
Sbjct: 139 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKLAAESA 198
Query: 204 ME 205
E
Sbjct: 199 KE 200
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQAR 575
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGS-GSI 80
V F+++ P+ G +IG+ G I+ I+ T ++ +PG+ RV L+VG+ SI
Sbjct: 28 VHFKILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSI 87
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
R + + + E+++R + + AE +L +
Sbjct: 88 LRVFQYISEKIYEK-------PESILRSTNKGGRMPAERHKQ--------VKILVPNSTA 132
Query: 141 GVVVGKGGRNVTRMRIESGAKI 162
G+++GKGG + ++ +G I
Sbjct: 133 GIIIGKGGSFIKEVKESTGVFI 154
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG------PT 69
Query: 334 SPVQNAAVLVFARSVEVEGQ----QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVS 389
+ + A L+ + E Q QG SG + + ++V A G L G G S +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQG--SGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
E+ +VTG I++ +L + + V ISG + + + + + + G +
Sbjct: 128 EIREVTGASIQVA--SDMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGATI- 182
Query: 450 EARPRSPSGRVGGPAL 465
P P +VGGP +
Sbjct: 183 ---PYRPKPQVGGPVI 195
>gi|432848278|ref|XP_004066266.1| PREDICTED: far upstream element-binding protein 2-like [Oryzias
latipes]
Length = 584
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 74/169 (43%), Gaps = 24/169 (14%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IGR G I+ I+ ++ C++ G R I + GS +R +++
Sbjct: 108 PDSMVGLIIGRGGEQINKIQHESGCKVQIAHDSAGLPERSISLTGSLDAIQRARALIDEI 167
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
V G E S+ Q+ ++ ++ K G+++GKGG +
Sbjct: 168 VSRGHEPSNGQQGSMQE------------------------MIIPAGKAGLIIGKGGETI 203
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
+++ +G K++++ + D+ ++I G V++A V L+
Sbjct: 204 KQLQERAGVKMILIQDGSQPPNVDKPLRIIGDPYKVQQAKEMVNEILRE 252
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 178/438 (40%), Gaps = 64/438 (14%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I V ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADGVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK A+
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
C M+K + + + S H P L+L G ++S
Sbjct: 334 ENCCRAEQEIMKKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPP 385
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
+ P ++ +++ IIGK+G ++ L + A I A P
Sbjct: 386 PPSSVTGAAPYSSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
Query: 314 T-KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
T S R+V I+ + A ++ + E + F G + + I V
Sbjct: 446 TPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRV 494
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQ 428
A G + G G V+E++++T ++ +V +Q +ND V+++I G + + Q
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQ 550
Query: 429 NALSEVVGRLRHNLKSGE 446
+ +++ +++ + G+
Sbjct: 551 RKIRDILAQVKQQHQKGQ 568
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 89/438 (20%), Positives = 178/438 (40%), Gaps = 64/438 (14%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I V ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK A+
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHS 253
C M+K + + + S H P L+L G ++S
Sbjct: 334 ENCCRAEQEIMKKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPP 385
Query: 254 SSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPL 313
+ P ++ +++ IIGK+G ++ L + A I A P
Sbjct: 386 PPSSVTGAAPYSSFMQAPEQGMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPE 445
Query: 314 T-KSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILV 372
T S R+V I+ + A ++ + E + F G + + I V
Sbjct: 446 TPDSKVRMVVITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRV 494
Query: 373 GADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQ 428
A G + G G V+E++++T ++ +V +Q +ND V+++I G + + Q
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQ 550
Query: 429 NALSEVVGRLRHNLKSGE 446
+ +++ +++ + G+
Sbjct: 551 RKIRDILAQVKQQHQKGQ 568
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G ++GKGG + R+R ESGA+IV+ PP + D+++I I+G T +K + C+
Sbjct: 522 GTIIGKGGERINRIREESGAQIVVDPPTPDS--DERIITISGTTSQIKLGQYLLQQCI 577
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
LR+L + +A +IGK G ++ L++ A S P + + ERV+ IS
Sbjct: 284 LRLLIASKSAGAVIGKGGENIKRLRSQYCA--SVNIPDSSTPERVLNISC---------- 331
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
N A L S + SG + + V +LV G + G + E+ D+T
Sbjct: 332 -ANVATLTDCVSDLIPRLDDGKSGPQEAE---VRMLVHQSQAGAIIGRAGFKIKELRDIT 387
Query: 396 GTDIKLVGGEQVLGCA-AQNDVVIQISGEYKNVQNALSEV 434
G I++ CA + VIQ SG+ + + NA+ V
Sbjct: 388 GAGIRVYS-----ECAPLSTERVIQFSGDKEKIVNAIRHV 422
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 52/320 (16%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
+++ R + + G +IG++G ++ +R +T + PG RV+ V G
Sbjct: 42 MLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGP------ 95
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANTT 138
+ T A V + + E ++ G G V G LL +
Sbjct: 96 --------------LQGTARAYALVAKGLLEGAPQM---GMGGIVNNNGTHPVRLLISHN 138
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAV 194
++G ++G+ G + ++ SG ++V MLP ++++++ G ++KA+ +
Sbjct: 139 QMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIEKAVWEI 193
Query: 195 TTCLQHLSTMEKSPICFNRPIE-KVFYSNSSDPHREFFPHLSLVPPLTGNP---SDNASE 250
CL I +N + V S S + + S TGN SD S
Sbjct: 194 GKCLIDDWQRGTGTILYNPAVRASVGGSTSMNTSSVGNGYNSRPYNRTGNGADFSDGQSG 253
Query: 251 FHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
+ ++ D R +P + + G + Q +++ G IIG+ G+ + ++ +SG
Sbjct: 254 GYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGC----IIGRGGSKITEIRRSSG 309
Query: 305 ALISFA-APLTKSGERVVTI 323
A IS A AP ++GER+ TI
Sbjct: 310 ARISIAKAPHDETGERMFTI 329
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG------PT 69
Query: 334 SPVQNAAVLVFARSVEVEGQ----QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVS 389
+ + A L+ + E Q QG SG + + ++V A G L G G S +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQG--SGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
E+ +VTG I++ +L + + V ISG + + + + + + G +
Sbjct: 128 EIREVTGASIQVA--SDMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGATI- 182
Query: 450 EARPRSPSGRVGGPAL 465
P P +VGGP +
Sbjct: 183 ---PYRPKPQVGGPVI 195
Score = 38.5 bits (88), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 31/191 (16%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG-SGS 79
P ++ RL+ VG +IG+ G I+ R ++ +I+ G R++ V G + S
Sbjct: 14 PSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTNS 71
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD-GDDVAYCGLLANTT 138
I + + + FE +++G G L+ +
Sbjct: 72 IFKAFTL------------------ICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPAS 113
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+ G ++GKGG + +R +GA I + D L T + + A+T C+
Sbjct: 114 QCGSLIGKGGSKIKEIREVTGASIQVA--------SDMLPNSTERAVTISGTSEAITQCI 165
Query: 199 QHL-STMEKSP 208
H+ M +SP
Sbjct: 166 YHICCVMLESP 176
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 99/443 (22%), Positives = 176/443 (39%), Gaps = 88/443 (19%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCR--IHCEGGFPGSDHRVILVV---GSGSID 81
R++ PT VG +IG+ G I ++ + T+ + IH + S+ V + GS
Sbjct: 97 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEGSSEAC 156
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
RRI+ E E + +E +++ LA+ + +G
Sbjct: 157 RRILEIMQK---EADETKAVEEVPLKI-------------------------LAHNSLVG 188
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++GK GRN+ ++ ++G KI + P + D I T+ VK + A ++ +
Sbjct: 189 RLIGKEGRNLKKIEQDTGTKITISP------LQDLTIYNPERTITVKGTIEACSSA--EV 240
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPP---------LTGNPSD 246
M K + + V S P F LS++P + NP
Sbjct: 241 EIMRKLREAYENDMLTVNQQGSLIPGLNLSALGIFSTGLSMLPSAAGPRGAAAASYNPFA 300
Query: 247 NASEFHSSSADADR------DHPGLDKKGRKQEVALRMLFSGWTASG-IIGKRGAIVRSL 299
+ S + S A + HP + QEV LF A G IIGK+G ++ L
Sbjct: 301 SHSAYLSGLYGAPQIGVFPHQHPVPE-----QEVV--YLFIPTQAVGAIIGKKGHHIKQL 353
Query: 300 QNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSS 358
+ A I A A GER+V I+ + A +F + E + F+
Sbjct: 354 ARFARASIKIAPAEGPDVGERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNP 404
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
E + I V + G + G G V+E++++T ++ +V +Q +V++
Sbjct: 405 KEEV--KLKAHIRVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIV 459
Query: 419 QISGEY---KNVQNALSEVVGRL 438
+I G + + Q + E+V ++
Sbjct: 460 KIIGHFFASQTAQRKIREIVQQV 482
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+ DT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG--PTDTIF 71
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ A++ + ++ S +K V + ++V A G L G G S + EM +
Sbjct: 72 ---KAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 128 STGAQVQVAG 137
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 180/435 (41%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 189 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 237
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ ST E + + E+ + D D +LA+ +G ++
Sbjct: 238 ------------SIHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 285
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 286 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 337
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L S +A SS +
Sbjct: 338 KKVREAYENDVAAM----SLQSH--LIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSS 391
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
+ +QEV +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 392 F-MQAPEQEV-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 449
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 450 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 498
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 499 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 554
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 555 QQHQKGQ-SNQAQAR 568
>gi|348562599|ref|XP_003467097.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cavia porcellus]
Length = 599
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 173/427 (40%), Gaps = 60/427 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 219 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 267
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + E+ + D D +LA+ +G ++
Sbjct: 268 ------------SVHSTPEGCSSACRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 315
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 316 GKEGRNLKKVEQDTDTKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 367
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + E + S H P L+L G ++S + P
Sbjct: 368 KKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 419
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
+QE+ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 420 SSFMAPEQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 478
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 479 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 527
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 528 GGKTVNELQNLTAAEV-VVPRDQT---PDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 583
Query: 440 HNLKSGE 446
+ G+
Sbjct: 584 QQHQKGQ 590
>gi|254566093|ref|XP_002490157.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|238029953|emb|CAY67876.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|328350558|emb|CCA36958.1| RNA-binding protein rnc1 [Komagataella pastoris CBS 7435]
Length = 379
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 122/307 (39%), Gaps = 59/307 (19%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
++ + +++ R + G +IG+ GS I+SIR + C+ V +G
Sbjct: 94 DVSNTLITHRFLVSKREAGTIIGKEGSCITSIR------MGCD-------------VKAG 134
Query: 79 SIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD---GDGDDV---AYCG 132
+ + C + ++ G V + AV R+ + + + A + D G V
Sbjct: 135 -VSELVRGCVDRILTISGSVENVGRAVGRLAQVLVDTAAFSQLDFAPSGGTSVMGVTRIR 193
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL T++G ++GK G + ++ K+V P A ++++++ G LA++ A V
Sbjct: 194 LLIPNTQMGALIGKRGIRIRALQQYHSVKMVASKDP-LANSTERVVEVQGTPLAIESAAV 252
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFH 252
++ CL +E F P Y S+ P + TG+ N+
Sbjct: 253 TISKCL-----LED----FMLPAADTIYYVSAPPA----GYGGAARATTGDSFLNSDSLG 299
Query: 253 SSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP 312
+S + + F G IIGKRG ++ ++ SG IS +
Sbjct: 300 PTSTET-------------------VYFPGELVGAIIGKRGVRIQEIRKLSGCAISIDSA 340
Query: 313 LTKSGER 319
T GER
Sbjct: 341 NTTGGER 347
>gi|118482617|gb|ABK93228.1| unknown [Populus trichocarpa]
Length = 159
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
D V+ ++ P ++GGLIGRSGS IS IR ++ I GG HR I + GS
Sbjct: 75 DYVTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKVHGGKGAQKHRHIQLAGS 129
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 37 GGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G +IG+ G I ++++T I +PG+ RV LV G+ + + V
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTR 153
E + + T+ V+ + + + + D L+ + G+++GKGG V
Sbjct: 61 EIPQ-AMTKPEVVNILQPQTTM--------NPDRAKQAKLIVPNSTAGLIIGKGGATVKA 111
Query: 154 MRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNR 213
+ +SGA + + P + ++++ ++G V KA+ A+ +Q + +S C N
Sbjct: 112 VMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI---VQKVQEDPQSSSCLN- 167
Query: 214 PIEKVFYSNSSDP 226
+ Y+N + P
Sbjct: 168 ----ISYANVAGP 176
>gi|350646767|emb|CCD58488.1| soluble guanylate cyclase gcy, putative [Schistosoma mansoni]
Length = 1102
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI---HCEGGFPGSDHRVILVVGSGSIDRR 83
F+++ P G +IG+ G I +I+R T R+ + +PG+ RV L++G
Sbjct: 6 FKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIG------- 58
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFER-MWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
T EA I++ + M ++ + L+ ++T G+
Sbjct: 59 -----------------TLEACIQLHDYVMAKISKRPQNIAIITPTGVKILVPDSTA-GI 100
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKAL 191
++GK G + R++ ES A I + P + ++ I ITG +KA+
Sbjct: 101 IIGKFGNFIERIKEESNAFIQVSQRPKDIRLFERCIVITGELKERRKAV 149
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 177/443 (39%), Gaps = 75/443 (16%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I + ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SIHSTPEGCSAACKMILEIMQKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
LA+ +G ++GK GRN+ ++ ++ KI + +++ D + T+ VK ++
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGSI-- 333
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE-----FFPHLS-LVPPLTGNPSDN 247
C M+K + + + + P FP S VPP + S
Sbjct: 334 ENCCRAEQEIMKKVREAYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGA 393
Query: 248 ASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALI 307
A +SS +++ + + IIGK+G ++ L + A I
Sbjct: 394 AP--YSSFLPPEQE-------------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASI 438
Query: 308 SFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAV 366
A A S R+V I+ + A ++ + E + F G + +
Sbjct: 439 KIAPAETPDSKVRMVIITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKL 487
Query: 367 AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY-- 424
I V A G + G G V+E++++T ++ +V +Q Q V+++I G +
Sbjct: 488 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTPDENEQ--VIVKIIGHFYA 544
Query: 425 -KNVQNALSEVVGRLRHNLKSGE 446
+ Q + +++ +++ + G+
Sbjct: 545 SQMAQRKIRDILAQVKQQHQKGQ 567
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G V+G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 140 LLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERVVEVQGTPEGIQ 194
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIE---KVFYSNSSDPHREFFPHLSLVPPLTGNPS 245
+A+ + CL + +N + + + + P + + TGN +
Sbjct: 195 RAVWEICKCLVDDWQRGTGTVLYNPVVRGGGQPLGGDRNYPQERSYGSSRVT--RTGNGA 252
Query: 246 DNASEF-------HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAI 295
D +S S S A R P D+ G + Q +++ G IIG++G+
Sbjct: 253 DFSSNSGGRPYNRRSDSDAASRGPPTHDENGEEIQTQNISIPADMVGC----IIGRQGSK 308
Query: 296 VRSLQNASGALISFA-APLTKSGERVVTI 323
+ ++ ASGA IS A P +SGER+ TI
Sbjct: 309 ISEIRKASGARISIAKGPHDESGERMFTI 337
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
+ ++ + GV++GKGG+NV +R E+G K + + D+++ ITG AV KA
Sbjct: 55 IVSSKEAGVIIGKGGQNVANLRDETGVKAGV--SKVVQGVHDRVLTITGGCDAVSKAYAV 112
Query: 194 VTTCL 198
V L
Sbjct: 113 VARSL 117
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
P + + G + +R+L G IIGK+G V+ ++ SGA I+ + ER+VT
Sbjct: 3 PKVTEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISE--GNCPERIVT 60
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I+ + + A++ F ++ S +K V + ++V A G L G
Sbjct: 61 ITG-----PTDAIFKAFAMIAFKFEEDINNSMTNSPATSK-PPVTLRLVVPASQCGSLIG 114
Query: 383 SGSSAVSEMEDVTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
G S + E+ + TG +++ G E+ + + D +IQ
Sbjct: 115 KGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGMPDAIIQ 157
Score = 39.3 bits (90), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR+ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMRVESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + ++M SP P+
Sbjct: 74 MIAFKFEEDINNSMTNSPATSKPPV 98
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+ DT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG--PTDTIF 71
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ A++ + ++ S +K V + ++V A G L G G S + EM +
Sbjct: 72 ---KAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 128 STGAQVQVAG 137
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGKRG ++S+++ SGA I+ + ER+VTI+ +DT
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTITG--NVDT-- 76
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
N A + + E Q + K + + ++V A G L G G S + E+ +
Sbjct: 77 ---INKAFSMICNKFQ-EDMQALPNSVPK-PPITMRLIVPATQCGSLIGKGGSKIKEIRE 131
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
TG I++ ++L + + V I S +
Sbjct: 132 ATGASIQV--ASEMLPSSTERAVTISGSAD 159
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 34 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
Query: 64 -FPGSDHRVILVVGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
+PG+ RV L+ G+ +++ F + V+ T+ + + + V
Sbjct: 91 FYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP--VSILQPQTTV------ 142
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ D + ++ + G+++GKGG V + +SGA + + P + ++++ ++
Sbjct: 143 --NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVS 200
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G +K AV +Q + +S C N + Y+N + P P T
Sbjct: 201 GEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP--------T 244
Query: 242 GNPSDNASE 250
G+P N +E
Sbjct: 245 GSPYANTAE 253
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG------PT 69
Query: 334 SPVQNAAVLVFARSVEVEGQ----QGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVS 389
+ + A L+ + E Q QG SG + + ++V A G L G G S +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQG--SGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
E+ +VTG I++ +L + + V ISG + + + + + + G +
Sbjct: 128 EIREVTGASIQVA--SDMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGATI- 182
Query: 450 EARPRSPSGRVGGPAL 465
P P +VGGP +
Sbjct: 183 ---PYRPKPQVGGPVI 195
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
V LRM+ G A IIGK+G V+ + SGA I+ + + ER+VT++ +
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISD--SSCPERIVTVTGTTDQIFK- 58
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
A + + E + +S V + ++V A G L G G + + E+ +
Sbjct: 59 ------AFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRE 112
Query: 394 VTGTDIKLV------GGEQVLGCAAQNDVVIQ 419
+TG I++ E+ + + Q D + Q
Sbjct: 113 LTGASIQVASEMLPNSTERAVTVSGQADAITQ 144
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 34 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
Query: 64 -FPGSDHRVILVVGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
+PG+ RV L+ G+ +++ F + V+ T+ + + + V
Sbjct: 91 FYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP--VSILQPQTTV------ 142
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ D + ++ + G+++GKGG V + +SGA + + P + ++++ ++
Sbjct: 143 --NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVS 200
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G +K AV +Q + +S C N + Y+N + P P T
Sbjct: 201 GEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP--------T 244
Query: 242 GNPSDNASE 250
G+P N +E
Sbjct: 245 GSPYANTAE 253
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQAR 575
>gi|358387038|gb|EHK24633.1| hypothetical protein TRIVIDRAFT_54511 [Trichoderma virens Gv29-8]
Length = 369
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G ++G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 137 LLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQ 191
Query: 189 KALVAVTTCL-----QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN 243
+A+ ++ CL + T+ +P+ +P S + S TGN
Sbjct: 192 RAIWEISKCLVDDWQRGTGTVLYNPVVRTQPSGSGSLGGSGYNGGGRGDYGSPRVMRTGN 251
Query: 244 PSDNAS------EFHSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGA 294
+D ++ S S A+R P D+ G + Q +++ G IIG+ G+
Sbjct: 252 GADFSNGGSRPFSRRSDSDAANRGPPTHDENGEEIQTQNISIPADMVGC----IIGRGGS 307
Query: 295 IVRSLQNASGALISFA-APLTKSGERVVTI 323
+ ++ SGA IS A AP ++GER+ TI
Sbjct: 308 KISDIRKTSGARISIAKAPHDETGERMFTI 337
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
+ ++ + GV++GKGG+NV +R E+G K + + D+++ ITG A+ +A
Sbjct: 52 IVSSKEAGVIIGKGGKNVADLRDETGVKAGV--SKVVQGVHDRVLTITGGCDAISRAYAI 109
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
V L +E +P + V SN + P + H
Sbjct: 110 VARAL-----LEGAPAV---GMGGVIQSNGTHPIKLLISH 141
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 33 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 89
Query: 64 -FPGSDHRVILVVGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
+PG+ RV L+ G+ +++ F + V+ T+ + + + V
Sbjct: 90 FYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP--VSILQPQTTV------ 141
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ D + ++ + G+++GKGG V + +SGA + + P + ++++ ++
Sbjct: 142 --NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVS 199
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G +K AV +Q + +S C N + Y+N + P P T
Sbjct: 200 GEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP--------T 243
Query: 242 GNPSDNASE 250
G+P N +E
Sbjct: 244 GSPYANTAE 252
>gi|428171580|gb|EKX40496.1| hypothetical protein GUITHDRAFT_113528 [Guillardia theta CCMP2712]
Length = 1209
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 61/358 (17%), Positives = 131/358 (36%), Gaps = 75/358 (20%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG-SGSIDR 82
+ L P G ++G+ +++ + DT R+ + + +++ + G + +++R
Sbjct: 415 TTAVELSVPAGAAGMIVGKRAAMLKKFKADTGARVQLKAENTSEEVKIVQIDGGAAAVER 474
Query: 83 RI--------MFCENDVVVEGGEVSSTQEAVIRVFE------------------------ 110
+ ++ +N+ + + ++ ++ +
Sbjct: 475 AVHMLIETLTLWSQNEEAWKDKDAEHWKDYLLSQYSKQKQNQQQAQQQNQQQANEKAQGR 534
Query: 111 ------RMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVM 164
R ++ +E + D + + T G++VGK G+ + + +GA + +
Sbjct: 535 PPQAQLRPGTIQEFLEDQREADKLIRIEMQIPVTAAGMIVGKQGKTIKNIHHRTGATVAL 594
Query: 165 LPPPACAAIDDQLIQITGATLAVKKALVAVTTC-------------------LQHLSTME 205
+ +++ I G VK A V L HL++
Sbjct: 595 VQDVNPEDETKKVLAIQGKKSQVKLARDLVIDLMLTWLKNAQDEQGGGPGAKLHHLASKI 654
Query: 206 KSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGL 265
+ I E N H + P S++ L G + PG+
Sbjct: 655 QERIAPVVTKEAQKAQNQGQKHEQAAPASSVLDELKG-----------------IEIPGV 697
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G ++ + L S TA+ IIGK+G +++ LQ+ SGA IS + T+ G++ V I
Sbjct: 698 ILSGEEEHPRVEFLVSIATAAMIIGKKGMMLKQLQHRSGAKISLDSVYTQEGKKQVVI 755
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 34 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
Query: 64 -FPGSDHRVILVVGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
+PG+ RV L+ G+ +++ F + V+ T+ + + + V
Sbjct: 91 FYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP--VSILQPQTTV------ 142
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ D + ++ + G+++GKGG V + +SGA + + P + ++++ ++
Sbjct: 143 --NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVS 200
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G +K AV +Q + +S C N + Y+N + P P T
Sbjct: 201 GEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP--------T 244
Query: 242 GNPSDNASE 250
G+P N +E
Sbjct: 245 GSPYANTAE 253
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQAR 575
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 37/197 (18%)
Query: 8 YGYSSKRRGPLNLP-----------DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKC 56
YGY ++R P++ P V++ P +VG +IGR G IS I+ ++ C
Sbjct: 52 YGYGVQKR-PMDDPVGNQLGALVHQRAVMTEEYNVPDKMVGFIIGRGGEQISRIQAESGC 110
Query: 57 RIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVE 116
+I G R ++ G+ + + + ++ +R
Sbjct: 111 KIQIAPDSGGMPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGP 153
Query: 117 AEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAI 173
D DG +L +K+G+V+GKGG + +++ +G K++M+ P P A
Sbjct: 154 G-FHNDMDGSSTVQE-ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA-- 209
Query: 174 DDQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 210 -DKPLRITGDPFKVQQA 225
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 102
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 103 VHSFIAEKVREIPQ-AMTKPEVVNILQP--------QTTMNPDRAKQAKLIVPNSTAGLI 153
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLST 203
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+ L S
Sbjct: 154 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKLAAESA 213
Query: 204 ME 205
E
Sbjct: 214 KE 215
>gi|367008424|ref|XP_003678712.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
gi|359746369|emb|CCE89501.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
Length = 430
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 239 PLTGNPSDNASEFHSSSADADRDH-------PGLDKKGRKQEVALRMLFSGWTASGIIGK 291
P GN + HSS D + +H G+D R V LRML AS I+G
Sbjct: 43 PAVGNEDQRMNGDHSSPQDGEEEHLGSHESIDGMDNSSR--HVHLRMLCLVKQASMIVGH 100
Query: 292 RGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVE 351
+G + ++ + I+ + + ERVV Y+ V A ++ +
Sbjct: 101 KGENISKIKAVTSTRINVSDNVRGVPERVV------YVRGSCENVAKAFGMIVRSINDRH 154
Query: 352 GQQGFSSGENKGDAV--AVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLG 409
G++G+ G+++ +++L+ +GC+ G S + E+E+++ +L Q L
Sbjct: 155 GEEGYD-----GNSIMSTINLLISHHLMGCIIGKHGSRLREIEELSAA--RLSASPQQL- 206
Query: 410 CAAQNDVVIQISG 422
ND ++ I+G
Sbjct: 207 -IMSNDRILSITG 218
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 138/374 (36%), Gaps = 81/374 (21%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
V R++C ++G G IS I+ T RI+ G RV+ V GS
Sbjct: 83 VHLRMLCLVKQASMIVGHKGENISKIKAVTSTRINVSDNVRGVPERVVYVRGS------- 135
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
CEN G V S + +R E EG ++ LL + +G ++
Sbjct: 136 --CENVAKAFGMIVRS-------INDRHGE-----EGYDGNSIMSTINLLISHHLMGCII 181
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV-TTCLQHLST 203
GK G + + S A++ P + +D+++ ITG A+ A + T ++
Sbjct: 182 GKHGSRLREIEELSAARLSASPQQLIMS-NDRILSITGVADAIHIATFYIGQTIMKCKEA 240
Query: 204 MEKSPICFNR--PIEKVF----------------------YSNSSDPHREFFPHLSLVPP 239
+ F + P+ V Y+NS R P + P
Sbjct: 241 FKSKKAIFYQPSPVYSVLVNGASHGGYSHQKHHQYHPNDKYTNSRAGKRVVRPAMMATTP 300
Query: 240 LTGNP---SDNASEFHSSSADADR----------------DHPGLDKKGR---KQEVALR 277
T P +N S+ ++A A D P + +QEV +
Sbjct: 301 -TAQPLPQENNGSQVTYTAAAAANATSFTPSFTIPNVRIIDEPAPPAQTMAIIEQEVYID 359
Query: 278 MLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQ 337
+ G IIGK G + S++ A+G I A P+ S ER +T+ S
Sbjct: 360 ENYVG----NIIGKEGKHINSIKEATGCSIYIADPVEGSLERRLTVKGT-------SMGS 408
Query: 338 NAAVLVFARSVEVE 351
AA+++ + +E++
Sbjct: 409 QAAIMLISNKIEID 422
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQAR 575
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 14/192 (7%)
Query: 271 KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLD 330
+ +V R+L S A G+IGK G ++ L++ A ++ P + +RV+ I A +
Sbjct: 6 QSQVTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNI--PDSSGPDRVLQIVA----N 59
Query: 331 TRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
+R + + L+ EV FS GE +S+LV VG + G G S + E
Sbjct: 60 SRENGLDIIKELIPLIREEVSP---FSDGEADPYTTTLSVLVQTSQVGAIIGRGGSKIKE 116
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV-VGRLRHNLKSGEILN 449
+ T T +K++ ++ L + + V QI+G V A+ E+ V +K +L
Sbjct: 117 LRQSTETKVKVL--QECLPYSTERRV--QINGAPDAVLLAIGEIYVTCSEAPIKGSVLLY 172
Query: 450 EARPRSPSGRVG 461
+ + PSG G
Sbjct: 173 DPSQQDPSGGYG 184
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 68
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + EM +
Sbjct: 69 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 128 STGAQVQVAG 137
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 117 AEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQ 176
++V+ +G + LL + ++G ++GK G V +MR ESGA+I + + ++
Sbjct: 4 SKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPER 59
Query: 177 LIQITGATLAVKKALVAVTTCLQH--LSTMEKSPICFNRPI 215
++ ITG T A+ KA + + +++M SP P+
Sbjct: 60 IVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|426226097|ref|XP_004007190.1| PREDICTED: far upstream element-binding protein 3 [Ovis aries]
Length = 574
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 58 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 117
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 118 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 160
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ + +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 161 -FHNDVDGNSTVQ-EIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 215
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 216 DKPLRITGDPFKVQQA 231
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQAR 575
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 124/313 (39%), Gaps = 45/313 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSID 81
+ R + G +IG+ GS I+ + + RI FPG++ R+I+V G
Sbjct: 40 IHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG----- 94
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
+F GEV E ++ E++ AE E + + L+ + G
Sbjct: 95 ---LF---------GEVMKAMELIL---EKLL---AEGEEFNEAEARPKVRLVVPNSSCG 136
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPP-ACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
++GKGG + ES A I + P + D+L+ +TG + A+ L+
Sbjct: 137 GIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTG---TFDNQMNAIDLILKK 193
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
LS P + P Y+ + P P ++P + P +NA + ++ R
Sbjct: 194 LSEDVHYPANLSSPFP---YAGLTFPSYPGVPVGYMIPQV---PYNNAVNYGPNNGYGGR 247
Query: 261 DH------PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP-- 312
P + + +L + + ++G+ G + + ASGA I +
Sbjct: 248 YQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGD 307
Query: 313 -LTKSGERVVTIS 324
++ + +R VTI+
Sbjct: 308 FISGTSDRKVTIT 320
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 16/176 (9%)
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISAL 326
+++ + LR L S +A IIGK G+ + Q+ SGA I + + +R++ +S L
Sbjct: 36 KEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL 95
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
V A L+ + + EG++ F+ E + V ++V G + G G +
Sbjct: 96 ------FGEVMKAMELILEKLL-AEGEE-FNEAEAR---PKVRLVVPNSSCGGIIGKGGA 144
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ + + IK+ Q +D ++ ++G + N NA+ ++ +L ++
Sbjct: 145 TIKSFIEESHAGIKI--SPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDV 198
>gi|307187117|gb|EFN72361.1| Far upstream element-binding protein 1 [Camponotus floridanus]
Length = 690
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 119/284 (41%), Gaps = 55/284 (19%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIM 85
+ P +VG +IGR G I+ ++ +T C+I GG P RV + GS R +
Sbjct: 103 IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP---ERVCTLTGS----REAV 155
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
++V+ S E + + M A G+G + ++ K+G+++G
Sbjct: 156 NRAKELVLSIVNQRSRSEGIGDI--NMSSASASG-GNGGMIHPGFVEIMIPGPKVGLIIG 212
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTME 205
KGG + +++ +SGAK+V++ + ++ ++ITG V+ A
Sbjct: 213 KGGETIKQLQEKSGAKMVVIQE-GPSQEQEKPLRITGDPQKVEYA--------------- 256
Query: 206 KSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGL 265
+++ Y ++ + F TGN S+++S F+ A++D
Sbjct: 257 ----------KQLVYELIAEKEMQMFHRGGRGTERTGNYSNDSS-FNHGPANSD------ 299
Query: 266 DKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
+ +L +IGK G +++ +Q SGA + F
Sbjct: 300 ---------GVEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQF 334
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 107/278 (38%), Gaps = 59/278 (21%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+G+++G+GG +TR++ E+G KI M P + +++ +TG+ AV +A V + +
Sbjct: 110 VGLIIGRGGEQITRLQSETGCKIQMAP--ESGGLPERVCTLTGSREAVNRAKELVLSIVN 167
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADAD 259
S E G N S +S +
Sbjct: 168 QRSRSE------------------------------------GIGDINMSSASASGGNGG 191
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA-LISFAAPLTKSGE 318
HPG + ++ G IIGK G ++ LQ SGA ++ ++ E
Sbjct: 192 MIHPGF----------VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQE 241
Query: 319 RVVTISA----LEYLDTR-HSPVQNAAVLVF---ARSVEVEGQQGFSSGENKGDAVA--V 368
+ + I+ +EY + + + +F R E G S N G A + V
Sbjct: 242 KPLRITGDPQKVEYAKQLVYELIAEKEMQMFHRGGRGTERTGNYSNDSSFNHGPANSDGV 301
Query: 369 SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQ 406
+LV VG + G G + +++ +G ++ G +
Sbjct: 302 EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGRE 339
>gi|326519350|dbj|BAJ96674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 683
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 28 RLV-CPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDH--RVILVVGS-GSIDR 82
RL+ P VG LIG++G I +++ + +I + SD R + +VG+ SID+
Sbjct: 153 RLIDVPNTKVGVLIGKAGETIRNLQMSSGAKIQITKDADVSSDAMTRPVELVGTVESIDK 212
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
++ V+ E E + + + F + E +L K+G+
Sbjct: 213 AEQLIKS-VIAEA-EAGGSPALIAKGFGSGQSGSEQFE------------MLVPDNKVGL 258
Query: 143 VVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++GKGG + ++ SGA+I ++P PPA + ++ +++TG ++ A + +
Sbjct: 259 IIGKGGETIKNLQTRSGARIQLIPQHPPAGTTLTERTVRVTGNKKQIEAAKELIKQAM 316
>gi|365762050|gb|EHN03665.1| Hek2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 328
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA-LISFAAPLTKSGERVVTISALE 327
+ Q R+LFS S IIGK GA+++ L + + +++ L S +RV+ + L
Sbjct: 131 NKNQVTTARLLFSNSAISAIIGKNGAVIKKLMDENDLRILASKHYLPDSEDRVLELQGLP 190
Query: 328 YLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGE-------------NKGDAVAVSILVGA 374
S + NA + + ++E + FS + ++ ++++
Sbjct: 191 ------SAIGNAWLQISQLNMEPRSENTFSERKYSPHLAKALRGSADRAAEFRSTVMIPE 244
Query: 375 DFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNA 430
+FVG L G G + ++ + T T I + + ++Q + + +NVQ A
Sbjct: 245 EFVGALVGRGGNRIANLRKYTKTKILIESQDSAKETSSQKRTFVIVGNLERNVQIA 300
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDITNSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LR++ G IIGK+G IV+ + SGA I+ + ER+VTIS
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTISG------ST 64
Query: 334 SPVQNAAVLVFARSVE-VEGQQGFSSGENKGDA-VAVSILVGADFVGCLTGSGSSAVSEM 391
+ A L+ + E +E Q G + G + + ++V A G L G G + + E+
Sbjct: 65 EAIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEI 124
Query: 392 EDVTGTDIKL 401
+ TG I++
Sbjct: 125 REATGAQIQV 134
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 43/193 (22%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ RL+ VG +IG+ G I+ R ++ +I+ + GS RI
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKIN---------------ISDGSCPERI 57
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMW-EVEAEVE---GDGDGDDVAYCG----LLAN 136
+ +S + EA+ + F + +VE +E G + CG L+
Sbjct: 58 V-----------TISGSTEAIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVP 106
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
++ G ++GKGG + +R +GA+I + D L Q T + + ++T
Sbjct: 107 ASQCGSLIGKGGNKIKEIREATGAQIQVA--------SDVLPQSTERAVTLTGTRDSITQ 158
Query: 197 CLQHL-STMEKSP 208
C+ H+ + M +SP
Sbjct: 159 CIFHICAVMVESP 171
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGS-GSIDR 82
+++ P+ G +IG+ G I ++++T I +PG+ RV L+ G+ +++
Sbjct: 62 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 121
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
F + V+ T+ + + + V + D + ++ + G+
Sbjct: 122 VHGFIAEKIREMPQNVAKTEP--VSILQPQTTV--------NPDRIKQVKIIVPNSTAGL 171
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
++GKGG V + +SGA + + P + ++++ ++G +K AV +Q +
Sbjct: 172 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRK---AVELIIQKIQ 228
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+S C N + Y+N + P P TG+P N +E
Sbjct: 229 EDPQSGSCLN-----ISYANVTGPVANSNP--------TGSPYANTAE 263
>gi|390458450|ref|XP_002806580.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Callithrix jacchus]
Length = 773
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 43/200 (21%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 167 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 226
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 227 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 263
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPAC 170
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+ P P
Sbjct: 264 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 323
Query: 171 AAIDDQLIQITGATLAVKKA 190
A D+ ++ITG V++A
Sbjct: 324 A---DKPLRITGDPFKVQQA 340
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 371 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 430
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 431 HIINELILTAQERDGFGGLAVARGRGRGRGDWSVGAPGGVQEITY---TVPADKCGLVIG 487
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 488 KGGENIKSINQQSGAHVELQRNPPP 512
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
K+ R+ + LR+L A IIGK G + L++ A S P ERV+TIS+
Sbjct: 68 KRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKA--SIIVPDCPGPERVLTISS- 124
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
P + ++E G + S D + V +LV GC+ G G
Sbjct: 125 ------DLPTVLQVLNEVVPNLEENGSRHGS------DEIDVRMLVHQSQAGCIIGKGGL 172
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+ E+ + TG IK+ C D +I I G+ + E++ ++
Sbjct: 173 KIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCIECIRELIATIK 221
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 46/203 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
RL+ P+ V G +IG+ G I+ +R S ++ ++V R++
Sbjct: 77 LRLLIPSKVAGSIIGKGGQNITKLR---------------SQYKASIIVPDCPGPERVLT 121
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD--GDDVAYCGLLANTTKIGVVV 144
+D+ V + + EV +E +G G D +L + ++ G ++
Sbjct: 122 ISSDLPT--------------VLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCII 167
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GKGG + +R ++GA+I + C D+LI I G K + + ++T+
Sbjct: 168 GKGGLKIKELREKTGARIKIY-SHCCPHSTDRLISICG------KPNTCIECIRELIATI 220
Query: 205 EKSPICFNRPIEKVFYSNSSDPH 227
+ SP+ +N DPH
Sbjct: 221 KTSPL--------KGVNNPYDPH 235
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
A IIGK GA +R +++ SGA I+ PL+ S +R++TI+ L
Sbjct: 376 AGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGL 417
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+ DT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG--PTDTIF 71
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ A++ + ++ S +K V + ++V A G L G G S + EM +
Sbjct: 72 ---KAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 128 STGAQVQVAG 137
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA---PLTKSGERVVTISA 325
G + ++AL++L +A +IGK GA + S+++ SGA + ++ + +R+V IS
Sbjct: 31 GDETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISG 90
Query: 326 LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA---VSILVGADFVGCLTG 382
+ VL A+ V E + +SG D A VSI++ A G + G
Sbjct: 91 -----------KVETVLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACGLVIG 139
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVV 435
G ++ + + T I+L ++V N+ ++ I G Q A+ ++V
Sbjct: 140 KGGEKINSLREETQAKIQLQAKDKV-AIPGLNERIVTIQGTLPQAQTAVEKIV 191
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSID 81
++ +++ G +IG++G+ I+SI+ + ++ FPG+ R++L+
Sbjct: 36 MALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLI------- 88
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
G+V + A V M+ D + V ++ G
Sbjct: 89 -------------SGKVETVLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACG 135
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACA--AIDDQLIQITG----ATLAVKK 189
+V+GKGG + +R E+ AKI + A ++++++ I G A AV+K
Sbjct: 136 LVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEK 189
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 128/334 (38%), Gaps = 59/334 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD--HRVILVVGSGSIDRRI 84
RL+ P+ G +IG+ G I +R + + P S R++ +V ID +
Sbjct: 107 LRLLVPSRGAGAVIGKGGESIKRLRAECDATLT----IPDSQTPERIVTIVAE--IDN-V 159
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ C N+++ E T+++ + EG G+ + LL + + G ++
Sbjct: 160 IRCVNEIIPRLDECLKTRDS-------------DDEGSARGE--SELRLLVHQSHAGAII 204
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
G+GG + +R E+ ++ + C +++IQI G + ++ + L+ +
Sbjct: 205 GRGGYRIKELREETSTQLKVY-SQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPI- 262
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
K P +RP E +FY DP+ F PP N P
Sbjct: 263 -KGP---SRPYESMFY----DPN--FVHEYGGFPP-DRNYRGMGPRGGMYGGGLPPRAPR 311
Query: 265 LDKKGRKQEVAL---------------RMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
GR + + ++ IIGK G + ++ SGA I
Sbjct: 312 FPYGGRGMGMGVSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGGERINRIREESGAHI-V 370
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
P + ER++TIS H+ +Q A L+
Sbjct: 371 VEPQQPNSERIITISG------SHAQIQTAQYLL 398
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 34 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 90
Query: 64 -FPGSDHRVILVVGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
+PG+ RV L+ G+ +++ F + V+ T+ + + + V
Sbjct: 91 FYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEP--VSILQPQTTV------ 142
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ D + ++ + G+++GKGG V + +SGA + + P + ++++ ++
Sbjct: 143 --NPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVS 200
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G +K AV +Q + +S C N + Y+N + P P T
Sbjct: 201 GEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP--------T 244
Query: 242 GNPSDNASE 250
G+P N +E
Sbjct: 245 GSPYANTAE 253
>gi|45383580|ref|NP_989608.1| far upstream element-binding protein 2 [Gallus gallus]
gi|25091747|sp|Q8UVD9.1|FUBP2_CHICK RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=Zipcode-binding protein 2
gi|18252632|gb|AAL66365.1|AF461020_1 zipcode-binding protein [Gallus gallus]
Length = 769
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 24/190 (12%)
Query: 16 GPLNLP--DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE---GGFPGSDHR 70
GP++ P V+ P +VG +IGR G I+ I++D+ C++ GG P R
Sbjct: 198 GPMHPPPRSTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ER 254
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+ + GS ++ +D+V G Q +G +
Sbjct: 255 SVSLTGSPEAVQKAKLMLDDIVSRGRGGPPGQ----------------FHDYANGQNGTV 298
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
++ K G+V+GKGG + +++ +G K++ + + D+ ++I G V++A
Sbjct: 299 QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQNTNVDKPLRIIGDPYKVQQA 358
Query: 191 LVAVTTCLQH 200
V L+
Sbjct: 359 CEMVMDILRE 368
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 28/151 (18%)
Query: 14 RRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVIL 73
++ P+++P RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 190 KQQPVDIP-----LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR--- 233
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
+G+ ++ I V ST E + + E+ + D D +
Sbjct: 234 KENAGAAEKAI------------SVHSTPEGCSSACKMILEIMQKEAKDTKTADEVPLKI 281
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVM 164
LA+ +G ++GK GRN+ ++ ++ KI +
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITI 312
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 95/425 (22%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 182 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 230
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E E +++ +LA+ +G ++GK
Sbjct: 231 ---HATPEG-----TSEACRMILEIM---QKEAEETKLAEEIP-LKILAHNGLVGRLIGK 278
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ V K V C + + M+K
Sbjct: 279 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITV-KGTVEACACAE-IEIMKK 330
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 331 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 390
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 391 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 450
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 451 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 499
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 500 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 556
Query: 430 ALSEV 434
A ++
Sbjct: 557 AQRKI 561
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 42/312 (13%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
++A+ IG ++GK GRN+ ++ E+G KI + +++ D I T+ VK +L
Sbjct: 344 IIASNNYIGRLIGKQGRNLKKIEEETGTKITI------SSLQDLNIYNNERTITVKGSLE 397
Query: 193 AVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVP-------- 238
A C + M+K + + + S P F L ++P
Sbjct: 398 AC--CNAEVEIMKKLREAYENDVAAINQQTSLIPGLNLNALGIFSSALPVLPSAAGPRST 455
Query: 239 -PLTGNPSDNASEFHSSSADADRDHP---GLDKKGRKQEVALRMLFSGWTASG-IIGKRG 293
P G N HSS + P + + QE + LF A G +IGK+G
Sbjct: 456 MPPVGPAGYNPFIGHSSHPSSLYGVPPASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKG 515
Query: 294 AIVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEG 352
++ L + +GA I A A + ER+V I+ + A +F + E
Sbjct: 516 QHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFK------AQGRIFGKLKE--- 566
Query: 353 QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
+ F+ E + I V + G + G G V+E++ +T ++ +V +Q
Sbjct: 567 ENIFTGKEEV--RLETHIRVPSTAAGRVIGKGGKTVNELQSLTSAEV-IVPRDQTPD--E 621
Query: 413 QNDVVIQISGEY 424
+N+VV++I G +
Sbjct: 622 KNEVVVKICGHF 633
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
K+ R+ + LR+L A IIGK G + L++ A S P ERV+TIS+
Sbjct: 40 KRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKA--SIIVPDCPGPERVLTISS- 96
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
L T + V V + G G D + V +LV GC+ G G
Sbjct: 97 -DLPT--------VLQVLNEVVPNLEENGSRHGS---DEIDVRMLVHQSQAGCIIGKGGL 144
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+ E+ + TG IK+ C D +I I G+ + + E++ ++
Sbjct: 145 KIKELREKTGARIKIYS----HCCPHSTDRLISICGKPSTCIDCIRELIATIK 193
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 48/209 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
RL+ P+ V G +IG+ G I+ +R S ++ ++V R++
Sbjct: 49 LRLLIPSKVAGSIIGKGGQNITKLR---------------SQYKASIIVPDCPGPERVLT 93
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD--GDDVAYCGLLANTTKIGVVV 144
+D+ V + + EV +E +G G D +L + ++ G ++
Sbjct: 94 ISSDLPT--------------VLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCII 139
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GKGG + +R ++GA+I + C D+LI I G K + + ++T+
Sbjct: 140 GKGGLKIKELREKTGARIKIY-SHCCPHSTDRLISICG------KPSTCIDCIRELIATI 192
Query: 205 EKSPICFNRPIEKVFYSNSSDPHR--EFF 231
+ SP+ +N DPH +F+
Sbjct: 193 KTSPL--------KGMNNPYDPHNFDDFY 213
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
PP+TGN N S+ + + ++ A IIGK GA +R
Sbjct: 368 PPMTGNNQGNQGNMGSN------------------KTSTQVTIPKDLAGAIIGKGGARIR 409
Query: 298 SLQNASGALISFAAPLTKSGERVVTISAL 326
+++ SGA I+ PL S +R++TI+ L
Sbjct: 410 KIRSDSGAGITIDEPLPGSNDRIITITGL 438
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 237 VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIV 296
VP + + + +A H+ R + + G + +R+L G IIGK+G V
Sbjct: 9 VPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETV 68
Query: 297 RSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
+ ++ SGA I+ + ER+VTI+ + + A++ + ++
Sbjct: 69 KKMREESGARINISE--GNCPERIVTITG-----PTDAIFKAFAMIAYKFEEDIINSMSN 121
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVG------GEQVLGC 410
S +K V + ++V A G L G G S + E+ + TG +++ G E+ +
Sbjct: 122 SPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 180
Query: 411 AAQNDVVIQ 419
+ D +IQ
Sbjct: 181 SGTPDAIIQ 189
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPV 130
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 14/189 (7%)
Query: 237 VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIV 296
VP + + + +A H+ R + + G + +R+L G IIGK+G V
Sbjct: 9 VPSVLPHSTLSALSHHAQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETV 68
Query: 297 RSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGF 356
+ ++ SGA I+ + ER+VTI+ + + A++ + ++
Sbjct: 69 KKMREESGARINISE--GNCPERIVTITG-----PTDAIFKAFAMIAYKFEEDIINSMSN 121
Query: 357 SSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG------EQVLGC 410
S +K V + ++V A G L G G S + E+ + TG +++ G E+ +
Sbjct: 122 SPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 180
Query: 411 AAQNDVVIQ 419
+ D +IQ
Sbjct: 181 SGTPDAIIQ 189
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 256 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 315
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 123/313 (39%), Gaps = 45/313 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSID 81
+ R + G +IG+ GS I+ + + RI FPG++ R+I+V G
Sbjct: 40 IHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG----- 94
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
+F GEV E ++ E++ AE E + + L+ G
Sbjct: 95 ---LF---------GEVMKAMELIL---EKLL---AEGEEFNEAEARPKVRLVVPNNSCG 136
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPP-ACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
++GKGG + ES A I + P + D+L+ +TG + A+ L+
Sbjct: 137 GIIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTG---TFDNQMNAIDLILKK 193
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADR 260
LS P + P Y+ + P P ++P + P +NA + ++ R
Sbjct: 194 LSEDVHYPANLSSPFP---YAGLTFPSYPGVPVGYMIPQV---PYNNAVNYGPNNGYGGR 247
Query: 261 DH------PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP-- 312
P + + +L + + ++G+ G + + ASGA I +
Sbjct: 248 YQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGD 307
Query: 313 -LTKSGERVVTIS 324
++ + +R VTI+
Sbjct: 308 FISGTSDRKVTIT 320
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 16/176 (9%)
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISAL 326
+++ + LR L S +A IIGK G+ + Q+ SGA I + + +R++ +S L
Sbjct: 36 KEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL 95
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
V A L+ + + EG++ F+ E + V ++V + G + G G +
Sbjct: 96 ------FGEVMKAMELILEKLL-AEGEE-FNEAEAR---PKVRLVVPNNSCGGIIGKGGA 144
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ + + IK+ Q +D ++ ++G + N NA+ ++ +L ++
Sbjct: 145 TIKSFIEESHAGIKI--SPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDV 198
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 54/208 (25%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
RL+ P+ V G +IG+ G IS +R ++H + V RI+
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLR---------------TEHNASVTVPDCPGPERILT 69
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
D+ + ++RV E+ +E DV +L + ++ G ++GK
Sbjct: 70 VAADL-----------DTMLRVVS---EILPNLE------DVIDIRMLVHQSQAGCIIGK 109
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG-ATLAVKKALVAVTTCLQHLSTME 205
GG + +R ++GA+I + C D+++QI G L V A+ C++ L T
Sbjct: 110 GGLKIKELREKTGARIKIY-SNCCPQSTDRIVQINGKGNLCVD----AIRECMELLKT-- 162
Query: 206 KSPICFNRPIEKVFYSNSSDPHR--EFF 231
SPI +N DPH E+F
Sbjct: 163 -SPI--------KGMNNPYDPHNFDEYF 181
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 27/164 (16%)
Query: 276 LRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHSP 335
+R+L A IIGK G + L+ A S P ER++T++A LDT
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNA--SVTVPDCPGPERILTVAA--DLDTMLRV 80
Query: 336 VQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVT 395
V + +L N D + + +LV GC+ G G + E+ + T
Sbjct: 81 V--SEIL-----------------PNLEDVIDIRMLVHQSQAGCIIGKGGLKIKELREKT 121
Query: 396 GTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
G IK+ C D ++QI+G+ +A+ E + L+
Sbjct: 122 GARIKIYSN----CCPQSTDRIVQINGKGNLCVDAIRECMELLK 161
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 29/209 (13%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G V+G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 140 LLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERVVEVQGTPEGIQ 194
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIE---KVFYSNSSDPHREFFPHLSLVPPLTGNPS 245
+A+ + CL + +N + + + + P + + TGN +
Sbjct: 195 RAVWEICKCLVDDWQRGTGTVLYNPVVRGGGQPLGGDRNYPQERSYGSSRVT--RTGNGA 252
Query: 246 DNASEF-------HSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAI 295
D +S S S A R P D+ G + Q +++ G IIG++G
Sbjct: 253 DFSSNSGGRPYNRRSDSDAASRGPPTHDENGEELQTQNISIPADMVGC----IIGRQGTK 308
Query: 296 VRSLQNASGALISFA-APLTKSGERVVTI 323
+ ++ ASGA IS A P +SGER+ TI
Sbjct: 309 ISEIRKASGARISIAKGPHDESGERMFTI 337
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
+ ++ + GV++GKGG+NV +R E+G K + + D+++ ITG AV KA
Sbjct: 55 IVSSKEAGVIIGKGGQNVANLRDETGVKAGV--SKVVQGVHDRVLTITGGCDAVSKAYAV 112
Query: 194 VTTCL 198
V L
Sbjct: 113 VARSL 117
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 36/150 (24%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSID 81
V F+++ P+ G +IG+ G I+ I+ T ++ +PG+ RV L+VG
Sbjct: 43 VHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVG----- 97
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVF----ERMWEVEAEV-----EGDGDGDDVAYCG 132
T E+++RVF E+++E V EG +
Sbjct: 98 -------------------TIESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQVK 138
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKI 162
+L + G+++GKGG + ++ +G I
Sbjct: 139 ILVPNSTAGMIIGKGGSFIKELKDTTGVFI 168
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 268 KGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---APLTKSGERVVTIS 324
K K V ++L A IIGK G + +QN + A + + A + ERV I
Sbjct: 37 KPAKGNVHFKILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLI- 95
Query: 325 ALEYLDTRHSPVQNAAVLVFAR--SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
+ +++ Q + ++ + SV G +G E V ILV G + G
Sbjct: 96 -VGTIESILRVFQYISEKIYEKPESVPKTGCEGRVLTERHKQ---VKILVPNSTAGMIIG 151
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
G S + E++D TG I++ + L A + + ++GE ++A++ ++ ++ +
Sbjct: 152 KGGSFIKELKDTTGVFIQVSQKSKELNLAER---CVTVAGELSQTRDAIALILSKIAEDP 208
Query: 443 KSGEILN 449
+S N
Sbjct: 209 QSSSCPN 215
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 22/196 (11%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPT------ 69
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKG----DAVAVSILVGADFVGCLTGSGSSAVS 389
+ + A L+ + E Q F ++ G + + ++V A G L G G S +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQ--FHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
E+ +VTG I++ ++L + + V ISG + + + + + + G +
Sbjct: 128 EIREVTGASIQVA--SEMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGATI- 182
Query: 450 EARPRSPSGRVGGPAL 465
P P +VGGP +
Sbjct: 183 ---PYRPKPQVGGPLI 195
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 134/357 (37%), Gaps = 119/357 (33%)
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
++G ++GK G N+ + R ESGAKI + + + ++++ +TG+T A+ KA +
Sbjct: 3 EVGSIIGKKGDNIKKFREESGAKINI----SDGSCPERIVTVTGSTEAILKAFSLIARKF 58
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADA 258
+ +ST +SN S HL PP+T
Sbjct: 59 EEVSTSS--------------HSNGS--------HLP-KPPVT----------------- 78
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
LR++ +IGK G+ ++ ++ A ++ + L S E
Sbjct: 79 -----------------LRLIVPASQCGSLIGKGGSKIKEIREARASIQVASEMLPNSTE 121
Query: 319 RVVTISALEYLDTR----------HSPVQNAAV----------LVFA--RSVEVEGQQGF 356
R VT+S T+ SP + A + ++FA ++ V+GQ
Sbjct: 122 RAVTVSGTADAITKCIYQICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAI 181
Query: 357 SSGE-NKGDAVAVS---IL----VGA---------------------DFVGCLTGSGSSA 387
+ K +A+ +L VGA D +GC+ G G S
Sbjct: 182 PHPDLTKLHQLALQHAPLLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSK 241
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG--EYKNVQNALSEVVGRLRHNL 442
++E+ ++G IK+ E+ D + ISG E N+ L L NL
Sbjct: 242 INEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKNL 293
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 169/427 (39%), Gaps = 66/427 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 237
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 238 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 285
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 286 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTIEACASA--EMEIMKK 337
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLV------------PPLTGNPSDNA 248
F + V + P F LS++ PP +P
Sbjct: 338 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPSPPY--HPFATH 395
Query: 249 SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
S + SS P ++ + + IIGK+GA ++ L +GA I
Sbjct: 396 SGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIK 455
Query: 309 FA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA 367
A A ER+V I+ + A +F + E + F+ E +
Sbjct: 456 IAPAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLE 504
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
I V + G + G G V+E++++T ++ +V +Q +V+++I G +
Sbjct: 505 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFAS 561
Query: 428 QNALSEV 434
Q A ++
Sbjct: 562 QTAQRKI 568
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 8/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+ DT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG--PTDTIF 71
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ A++ + ++ S +K V + ++V A G L G G S + EM +
Sbjct: 72 ---KAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 128 STGAQVQVAG 137
>gi|340377102|ref|XP_003387069.1| PREDICTED: far upstream element-binding protein 1-like [Amphimedon
queenslandica]
Length = 579
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 20/178 (11%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDHRVILVVGSGSIDR 82
++ + P +VG +IGR G +I+ ++ ++ +I G S R + + G+
Sbjct: 85 TMTIEIKVPNRMVGLVIGRQGEMINKLQAESGAKIQVAPDGSEVSGERSVSISGTPDTVE 144
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
+ N V+ G V+S V+ E EV VE L+ K+G+
Sbjct: 145 KAKLLVNGVIENAGGVTS----VVTNLEAGQEV---VE------------LMIPAGKVGL 185
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
++GKGG + ++ +G K+ M+ A+ ++ +++TG + KKA V ++
Sbjct: 186 IIGKGGEMIKMLQERAGCKMQMIQDGPYASTPEKPLRMTGFSENCKKARQLVLDLMEQ 243
>gi|169844143|ref|XP_001828793.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|116510164|gb|EAU93059.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 129/327 (39%), Gaps = 40/327 (12%)
Query: 6 NPYGYSSKR-RGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
NP S R R P P++ ++ R + T G +IG++G ++ +R T +
Sbjct: 8 NPQTTSPPRSRSPTPAPNETLTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVI 67
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
G RV+ V GS V + +A + ++
Sbjct: 68 AGVHERVLTVTGS--------------------VEAVAKAYNLIISQLVSSNPAAPPASS 107
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQI 180
+ LL + +G ++G+ G + ++ SGA++V MLP ++++++
Sbjct: 108 SNVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLPQST-----ERVVEV 162
Query: 181 TGATLAVKKALVAVTTCLQHLSTMEK--SPICFNR-PIEKVFYSNSSDPHREFFPHLSLV 237
G+ A+ +A+ + CL L E+ + F+ P + SN + +P
Sbjct: 163 QGSPEAIGRAVEEIGKCL--LEDWERGLGTVLFHPGPHDDRSRSNRGGQYSGSYPTGGGS 220
Query: 238 PPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVR 297
G+ ++ A S + R Q +++ G IIG+ G +
Sbjct: 221 RRPNGDSANRARAPSPGSPQSPSSSNPPATNLRTQNISIPSDMVGC----IIGRSGTKIT 276
Query: 298 SLQNASGALISFA-APLTKSGERVVTI 323
++ SG+ IS A AP +GER+ TI
Sbjct: 277 EIRRLSGSKISIAKAPHDDTGERMFTI 303
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENTGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+LA+ +G ++GK GRN+ ++ ++ KI + P
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP 314
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
PG+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T
Sbjct: 3 PGVIEDGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVG 378
++ NA FA ++ + SS N A V + ++V A G
Sbjct: 61 LAG----------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCG 110
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 111 SLIGKGGCKIKEIRESTGAQVQVAG 135
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF---PGSDHRVILVVGSGSIDR 82
S ++ P VG LIG+ G I ++ + +I P S R++ ++G+
Sbjct: 87 SKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGT----- 141
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG-----LLANT 137
D V S+ E +I E + E EA G G VA G +
Sbjct: 142 ------PDAV-------SSAEKLIN--EVLAEAEAGASGGGTRRMVAQSGGDEFVMQIPN 186
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKALVAVT 195
K+G+++GKGG + M+ +GA+I ++P PP ++ ++I G ++ A V
Sbjct: 187 NKVGLIIGKGGETIKSMQASTGARIQVIPLHPPPGDTSTERTLKIDGTPDQIESAKQLVN 246
Query: 196 TCL 198
L
Sbjct: 247 QIL 249
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGKRG ++S+++ SGA I+ + ER+VTI+ +DT
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD--GSCPERIVTITG--NVDTI- 77
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
N A + + E Q + K + + ++V A G L G G S + E+ +
Sbjct: 78 ----NKAFSMICNKFQ-EDMQALPNSVPK-PPITMRLIVPATQCGSLIGKGGSKIKEIRE 131
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
TG I++ ++L + + V I S +
Sbjct: 132 ATGASIQV--ASEMLPSSTERAVTISGSAD 159
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG+ +++ G E+ + + D +IQ
Sbjct: 126 STGSQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 130/335 (38%), Gaps = 72/335 (21%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVV 75
G LN+ ++ RL+ VG +IG+ G + +R ++ RI+ G S R++ +
Sbjct: 11 GSLNV---TLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTIT 65
Query: 76 GSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVA----- 129
G E + R F + + E ++ +V
Sbjct: 66 GP------------------------TEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPV 101
Query: 130 YCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKK 189
L+ ++ G ++GKGG + +R +GA++ + D L T + +
Sbjct: 102 TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVA--------GDMLPDSTERAVTISG 153
Query: 190 ALVAVTTCLQHL-STMEKSP----ICFNRPIEKVFYSNSSDPHREFFP----HLSLVPPL 240
A+T C++H+ S M +SP RP K+ + + H P H +P
Sbjct: 154 TPQAITQCVRHICSVMLESPPKGATIPYRP--KILPAGA---HAVLAPQHSAHAFAIPGQ 208
Query: 241 TGNPSDNASEFHS---------SSADADRDHPGLDKKGRK--QEVALRMLFSGWTASGII 289
+ ++ H S ++ PGLD QE+A+ G II
Sbjct: 209 YAFAHQDLTKLHQLAMQHIPLPSLGQSNPTFPGLDSSASTSTQELAIPNDLIGC----II 264
Query: 290 GKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
G++G+ + ++ SGA I A+ S R VTI+
Sbjct: 265 GRQGSKINEIRQVSGAHIKIASATDGSAVRQVTIT 299
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LR+L G IIGK+G V+ ++ SGA I+ + S ER+VTI+
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GSSPERIVTITG-------- 66
Query: 334 SPVQNA--AVLVFARSVEVEGQQGFS-SGENKGDAVAVSILVGADFVGCLTGSGSSAVSE 390
P + A + A+ E + + S V + ++ G L G G S + E
Sbjct: 67 -PTEGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKE 125
Query: 391 MEDVTGTDIKLVG 403
+ + TG +++ G
Sbjct: 126 IRETTGAQVQVAG 138
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 144 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 192
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 193 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 240
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 241 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 292
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + E + S H P L+L G ++S + P
Sbjct: 293 KKVREAY----ENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 344
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 345 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 404
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 405 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 453
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 454 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 509
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 510 QQHQKGQ-SNQAQAR 523
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 169/427 (39%), Gaps = 66/427 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 121 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HR---KENSGAAEKPVTI 169
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + ++V +LA+ +G ++GK
Sbjct: 170 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEVP-LKILAHNGFVGRLIGK 217
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 218 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTIEACASA--EMEIMKK 269
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLV------------PPLTGNPSDNA 248
F + V + P F LS++ PP +P
Sbjct: 270 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPSPPY--HPFATH 327
Query: 249 SEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALIS 308
S + SS P ++ + + IIGK+GA ++ L +GA I
Sbjct: 328 SGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIK 387
Query: 309 FA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVA 367
A A ER+V I+ + A +F + E + F+ E +
Sbjct: 388 IAPAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLE 436
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
I V + G + G G V+E++++T ++ +V +Q +V+++I G +
Sbjct: 437 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFAS 493
Query: 428 QNALSEV 434
Q A ++
Sbjct: 494 QTAQRKI 500
>gi|441623750|ref|XP_004088935.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Nomascus leucogenys]
Length = 847
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 37/197 (18%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 156 YGYGVQKRPLDDGVGNQLGALVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 215
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + E R+ ++ V+
Sbjct: 216 IQIASESSGIPERPCVLTGT---------------------PESIEQAKRLLGQI--VDR 252
Query: 118 EVEGDGDGDDV----AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAI 173
G G +D+ +L +K+G+V+G+GG + +++ +G K+VM+
Sbjct: 253 CRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTG 312
Query: 174 DDQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 313 ADKPLRITGDAFKVQQA 329
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 48/204 (23%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P P +S R + T +IGR+G+ ++ IR + R+ PG+ R++ V G
Sbjct: 80 PSEPPAQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFG 139
Query: 77 S--------GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV 128
+ G I RRI ND + V ++ I+
Sbjct: 140 ALDAVSKAFGLIVRRI----NDEPFDVASVPGSRAVTIK--------------------- 174
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKI----VMLPPPACAAIDDQLIQITGAT 184
+ +++G V+G+GG + ++ SGA++ VMLP ++++ ++G
Sbjct: 175 ----FIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLP-----GSTERILSVSGVA 225
Query: 185 LAVKKALVAVTTCLQHLSTMEKSP 208
A+ A+ + T L L E++P
Sbjct: 226 DAIHIAVYYIGTIL--LEYQERNP 247
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q++++R L AS IIG+ GA V ++ SGA ++ + + + ER++ + LD
Sbjct: 86 QQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNV--FGALDA 143
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD-AVAVSILVGADFVGCLTGSGSSAVSE 390
V A L+ R + F G AV + ++ +G + G G S + E
Sbjct: 144 ----VSKAFGLIVRRI----NDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKE 195
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
++D +G +L E +L + + ++ +SG + A+ + G IL E
Sbjct: 196 IQDASGA--RLNASEVMLPGSTER--ILSVSGVADAIHIAVYYI----------GTILLE 241
Query: 451 ARPRSP 456
+ R+P
Sbjct: 242 YQERNP 247
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 17/184 (9%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRVILVVGSGSIDRR 83
V+ + + P +G +IGR GS I I+ + R++ E PGS R++ V G
Sbjct: 171 VTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADAIHI 230
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFER----MWEVEAEVEGDGDGDDVAYC------GL 133
++ +++E E + + I + + M + G G A +
Sbjct: 231 AVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQTQQI 290
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAA------IDDQLIQITGATLAV 187
+ +G ++GK G + +R +S +I + P D++L+ ITG + +
Sbjct: 291 FIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQPVNI 350
Query: 188 KKAL 191
A+
Sbjct: 351 NIAV 354
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENTGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+LA+ +G ++GK GRN+ ++ ++ KI + P
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP 314
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+S R + G +IG+ G +S IR + R++ PG+ R++ VVG
Sbjct: 79 ISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGP------- 131
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDG----DDVAYCGLLANTTKI 140
VS+ +A V E++ E E + D G D +LAN ++
Sbjct: 132 -------------VSAVAKAYALVAEKIIE-ENTLAEDNKGPIQQDVTIKILILAN--RM 175
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL-- 198
G ++GK G + ++ SGAK+ P + ++++ I G A+++A+ + L
Sbjct: 176 GSIIGKSGSVIRSIQETSGAKVSAQEEPLPLST-ERVVTIHGTPDAIEQAVKKIGDILVD 234
Query: 199 ---QHLSTMEKSPICFNRPIEKVFYSNSSDPHREF 230
H + M PI P SN + HR +
Sbjct: 235 QPNHHGNYMLYKPIAGAAP--HTSSSNHGNGHRNY 267
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 266 DKKGR-KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
D KG +Q+V +++L IIGK G+++RS+Q SGA +S PL S ERVVTI
Sbjct: 155 DNKGPIQQDVTIKILILANRMGSIIGKSGSVIRSIQETSGAKVSAQEEPLPLSTERVVTI 214
>gi|449266765|gb|EMC77781.1| Far upstream element-binding protein 3, partial [Columba livia]
Length = 508
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
V++ P +VG +IGR G IS I+ ++ C+I GG P
Sbjct: 66 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMP--------------- 110
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV----AYCGLLAN 136
E V+ G + + E R+ ++ V+ G G +DV +L
Sbjct: 111 -------ERPCVLTG--MPESIEQAKRLLGQI--VDRCRNGPGFHNDVDGNSTIQEILIP 159
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKA 190
+K+G+V+GKGG + +++ +G K++M+ P P A D+ ++ITG V++A
Sbjct: 160 ASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQA 213
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S RV V+G +
Sbjct: 244 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISSERVAQVMGLPDRCQHAA 303
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+++++ E + + V G ++ Y K G+V+G
Sbjct: 304 HIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYT---VPADKCGLVIG 360
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 361 KGGENIKSINQQSGAHVELQRNPPP 385
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 48/204 (23%)
Query: 17 PLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVG 76
P P +S R + T +IGR+G+ ++ IR + R+ PG+ R++ V G
Sbjct: 80 PSEPPAQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFG 139
Query: 77 S--------GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDV 128
+ G I RRI ND + V ++ I+
Sbjct: 140 ALDAVSKAFGLIVRRI----NDEPFDVASVPGSRAVTIK--------------------- 174
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKI----VMLPPPACAAIDDQLIQITGAT 184
+ +++G V+G+GG + ++ SGA++ VMLP ++++ ++G
Sbjct: 175 ----FIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLP-----GSTERILSVSGVA 225
Query: 185 LAVKKALVAVTTCLQHLSTMEKSP 208
A+ A+ + T L L E++P
Sbjct: 226 DAIHIAVYYIGTIL--LEYQERNP 247
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 17/184 (9%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRVILVVGSGSIDRR 83
V+ + + P +G +IGR GS I I+ + R++ E PGS R++ V G
Sbjct: 171 VTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADAIHI 230
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFER----MWEVEAEVEGDGDGDDVAYC------GL 133
++ +++E E + + I + + M + G G A +
Sbjct: 231 AVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQTQQI 290
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPAC------AAIDDQLIQITGATLAV 187
+ +G ++GK G + +R +S +I + P A D++L+ ITG + +
Sbjct: 291 FIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTITGQPVNI 350
Query: 188 KKAL 191
A+
Sbjct: 351 NIAV 354
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDT 331
Q++++R L AS IIG+ GA V ++ SGA ++ + + + ER++ + LD
Sbjct: 86 QQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNV--FGALDA 143
Query: 332 RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD-AVAVSILVGADFVGCLTGSGSSAVSE 390
V A L+ R + F G AV + ++ +G + G G S + E
Sbjct: 144 ----VSKAFGLIVRRI----NDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKE 195
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
++D +G +L E +L + + ++ +SG + A+ + G IL E
Sbjct: 196 IQDASGA--RLNASEVMLPGSTER--ILSVSGVADAIHIAVYYI----------GTILLE 241
Query: 451 ARPRSP 456
+ R+P
Sbjct: 242 YQERNP 247
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
PG+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T
Sbjct: 3 PGVIEDGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIIT 60
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVG 378
++ NA FA ++ + SS N A V + ++V A G
Sbjct: 61 LAG----------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCG 110
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 111 SLIGKGGCKIKEIRESTGAQVQVAG 135
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 173/439 (39%), Gaps = 80/439 (18%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 339 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 385
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 386 ---KENTGAAEKPIT------------ILSTPEGASAACKSILEIMHKEAQDTKLTEEVP 430
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 431 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 483
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS-----LVPPLTGNPS 245
V TC + + K E S + H P L+ L PP S
Sbjct: 484 --NVETCARAEEEIMKK---IRESYENDIASMNLQAH--LIPGLNLNALGLFPPT----S 532
Query: 246 DNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
+ +P ++ + + + + IIGK+G ++ L +GA
Sbjct: 533 GMPPPTSGPPSTMTPPYPQFEQ---SETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 589
Query: 306 LISFA---APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
I A AP K R+V I+ + A ++ + E + F S + +
Sbjct: 590 SIKIAPAEAPDAKV--RMVIITGPPEAQFK------AQGRIYGKIKE----ENFVSPKEE 637
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
A I V + G + G G V+E+++++ ++ +V +Q N VV++I+G
Sbjct: 638 VKLEA-HIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTPD--ENNQVVVKITG 693
Query: 423 EY-------KNVQNALSEV 434
+ + +Q LS+V
Sbjct: 694 HFYACQVAQRKIQEILSQV 712
>gi|355707685|gb|AES03033.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 171
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
+++ P+ G +IG+ G I ++++T I +PG+ RV LV G+
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + V E + + T+ V+ + + + + D L+ + G++
Sbjct: 67 VHSFIAEKVREIPQ-AMTKPEVVNILQP--------QTTMNPDRAKQAKLIVPNSTAGLI 117
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
+GKGG V + +SGA + + P + ++++ ++G V KA+ A+
Sbjct: 118 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAI 168
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
K+ R+ + LR+L A IIGK G + L++ A S P ERV+TIS+
Sbjct: 54 KRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKA--SIIVPDCPGPERVLTISS- 110
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
P + ++E G + S D + V +LV GC+ G G
Sbjct: 111 ------DLPTVLQVLNEVVPNLEENGSRHGS------DEIDVRMLVHQSQAGCIIGKGGL 158
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+ E+ + TG IK+ C D +I I G+ + E++ ++
Sbjct: 159 KIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCIECIRELIATIK 207
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 46/203 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
RL+ P+ V G +IG+ G I+ +R S ++ ++V R++
Sbjct: 63 LRLLIPSKVAGSIIGKGGQNITKLR---------------SQYKASIIVPDCPGPERVLT 107
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD--GDDVAYCGLLANTTKIGVVV 144
+D+ V + + EV +E +G G D +L + ++ G ++
Sbjct: 108 ISSDLPT--------------VLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCII 153
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GKGG + +R ++GA+I + C D+LI I G K + + ++T+
Sbjct: 154 GKGGLKIKELREKTGARIKIY-SHCCPHSTDRLISICG------KPNTCIECIRELIATI 206
Query: 205 EKSPICFNRPIEKVFYSNSSDPH 227
+ SP+ +N DPH
Sbjct: 207 KTSPL--------KGVNNPYDPH 221
Score = 39.3 bits (90), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
A IIGK GA +R +++ SGA I+ PL+ S +R++TI+ L
Sbjct: 403 AGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGL 444
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 187 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 233
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 234 ---KENTGAAEKSIT------------ILSTPEGTSAACKSILEIMHKEAQDIKFTEEIP 278
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+LA+ +G ++GK GRN+ ++ ++ KI + P
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP 314
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 123
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 124 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 182
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 183 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 214
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 75 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 130
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 131 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 173
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 174 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 220
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 221 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 280
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 281 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 340
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 341 INEIRQMSGAQIKIANATE-----GSSERQITITGSPANISLAQYLINARL 386
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 128/334 (38%), Gaps = 59/334 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSD--HRVILVVGSGSIDRRI 84
RL+ P+ G +IG+ G I +R + + P S R++ +V ID +
Sbjct: 40 LRLLVPSRGAGAVIGKGGESIKRLRAECDATL----TIPDSQTPERIVTIVAE--IDN-V 92
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ C N+++ E T+++ + EG G+ + LL + + G ++
Sbjct: 93 IRCVNEIIPRLDECLKTRDS-------------DDEGSARGE--SELRLLVHQSHAGAII 137
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
G+GG + +R E+ ++ + C +++IQI G + ++ + L+ +
Sbjct: 138 GRGGYRIKELREETSTQLKVY-SQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIPI- 195
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
K P +RP E +FY DP+ F PP N P
Sbjct: 196 -KGP---SRPYESMFY----DPN--FVHEYGGFPP-DRNYRGMGPRGGMYGGGLPPRAPR 244
Query: 265 LDKKGRKQEVAL---------------RMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
GR + + ++ IIGK G + ++ SGA I
Sbjct: 245 FPYGGRGMGMGVSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGGERINRIREESGAHI-V 303
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV 343
P + ER++TIS H+ +Q A L+
Sbjct: 304 VEPQQPNSERIITISG------SHAQIQTAQYLL 331
>gi|320588068|gb|EFX00543.1| kh domain protein RNA-binding protein [Grosmannia clavigera kw1407]
Length = 375
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 34/216 (15%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G V+G+GG + ++ SG ++V +LP ++++++ G ++
Sbjct: 137 LLISHNQMGTVIGRGGLKIKHIQDVSGVRMVAQKDILPQST-----ERIVEVQGTPEGIQ 191
Query: 189 KALVAVTTCL-----QHLSTMEKSPICFNRPIEKVFYSNSSDPHREF-----FPHLSLVP 238
KA+ + CL + T+ +P+ + S S P + + +
Sbjct: 192 KAVWEICKCLVDDWQRGTGTVLYNPVVRTQGTSPTLGSGSIAPTSNYNSGGRSEYGNSRV 251
Query: 239 PLTGNPSD----NASEFHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGI 288
TGN +D +S ++ +D+D R P D++G + Q +++ G I
Sbjct: 252 TRTGNGADFSNGASSRPNNRRSDSDAAARGPPTHDEQGNEIQTQNISIPADMVGC----I 307
Query: 289 IGKRGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
IG+ G+ + ++ SGA IS A AP ++GER+ TI
Sbjct: 308 IGRAGSKISEIRKTSGARISIAKAPHDETGERMFTI 343
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
+ ++ + GV++GKGG+NV +R E+G K + + D+++ ITG A+ KA
Sbjct: 52 IVSSKEAGVIIGKGGKNVADLRDETGVKAGV--SKVVQGVHDRVLTITGGCDAISKAYAV 109
Query: 194 VTTCL 198
V L
Sbjct: 110 VARAL 114
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 24/207 (11%)
Query: 17 PLNLPD----DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRV 71
P ++P V+ + + P +G +IG+ GS I I+ + R++ EG PGS RV
Sbjct: 73 PFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERV 132
Query: 72 ILVVGSGSIDRRIMFCENDVVVEGGE-VSSTQEAVIRVFE--RMWEVEAEVEGDGDGDDV 128
+ V G + ++++E E + ST A R R A G V
Sbjct: 133 LSVAGVADAIHIATYYVGNILIEAQERMPSTANASYRPGNPTRRPITNAPYPGS---TYV 189
Query: 129 AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP-------PACAAID--DQLIQ 179
+ +G ++GKGG + +R S ++I ++ P PA AA ++L+
Sbjct: 190 QTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVV 249
Query: 180 ITGATLAVKKALVAVTTCLQHLSTMEK 206
ITG ++ A+ L H EK
Sbjct: 250 ITGQPANIQMAV----QMLYHRLEQEK 272
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 11/168 (6%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
S +V P VG +IGR+G +I I+ D RI + S RV V+G
Sbjct: 259 TSLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPE----- 313
Query: 85 MFCENDVVVEGGEVSSTQEAV-IRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
C + V + V + QE V R V+ G G +V Y K G+V
Sbjct: 314 -HCHHAVHLINELVQTAQERDGYGVMGRRGRVDCNTGGAGGLQEVTYA---VPADKCGLV 369
Query: 144 VGKGGRNVTRMRIESGAKI-VMLPPPACAAIDDQLIQITGATLAVKKA 190
+GKGG + ++ +S A + + PP + ++ I G ++KA
Sbjct: 370 IGKGGETIKNIKEQSRAHVELQRNPPPSTDPNVRIFSIRGTPQQLEKA 417
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDV 91
P +VG +IG+ G IS I++++ C+I I G +DR +
Sbjct: 90 PDKMVGFIIGKGGEQISRIQQESGCKIQ------------IASDSGGMLDRPCTLTGSPE 137
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
+E + +I +++G+G + +L K+G+V+GKGG +
Sbjct: 138 NIE--QAKRLLSEIIEQCRYGPGFHNDMDGNG-----SIQQMLIPANKVGLVIGKGGETI 190
Query: 152 TRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+++ +G +++M+ D+ ++ITG L V++A V ++
Sbjct: 191 KQLQERTGVQMMMIQDDPMPTGADKPLRITGDPLKVQQARELVVKLIR 238
>gi|406866101|gb|EKD19141.1| KH domain RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 372
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 141/352 (40%), Gaps = 64/352 (18%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG++G ++ +R +T + G RV+ + G
Sbjct: 49 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGAKAGVSKVVQGVHDRVLTIAGG------- 101
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD---GDGDDVAYCG-----LLAN 136
CE +S V R +EG G G V+ G LL +
Sbjct: 102 --CE--------AISKAYAIVARAL---------LEGAPQMGMGGVVSTSGTHPIKLLIS 142
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
++G ++G+ G + ++ SG ++V MLP +++++I G ++KA+
Sbjct: 143 HNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEIQGTPEGIQKAIW 197
Query: 193 AVTTCLQHLSTMEKSPICFN---RPIEKVFYSNSSDPHREFFPHLSLVPPL--TGNPSD- 246
+ CL + +N R + + P + TGN +D
Sbjct: 198 EICKCLIDDWQRGTGTVLYNPVVRTQPGGGPGMGQGGGGNGRDNYNSSPRVMRTGNGNDF 257
Query: 247 --NASEFHS---SSADA-DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQ 300
NA ++ S++DA R P D+ G + + + S IIG+ G+ + ++
Sbjct: 258 SENAPRTYNSRRSNSDAGQRGPPTHDENGEEYQTQNISIPSDMVGC-IIGRAGSKISEIR 316
Query: 301 NASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVE 351
+SGA IS A AP +GER+ TI + AA+ + ++E E
Sbjct: 317 KSSGARISIAKAPHDDTGERMFTIMGT-------TKANEAALYLLYENLEAE 361
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 16/186 (8%)
Query: 263 PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVT 322
P D++ + ++ LR + S A IIGK G V L++ +GA + + +RV+T
Sbjct: 38 PKTDEEYGESQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGAKAGVSKVVQGVHDRVLT 97
Query: 323 IS-ALEYLDTRHSPVQNAAVLVFARSVEVEG--QQGFSSGENKGDAVAVSILVGADFVGC 379
I+ E + + A + AR++ +EG Q G + + +L+ + +G
Sbjct: 98 IAGGCEAI--------SKAYAIVARAL-LEGAPQMGMGGVVSTSGTHPIKLLISHNQMGT 148
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+ G + ++D +G +++V +++L + + +++I G + +Q A+ E+ L
Sbjct: 149 IIGRQGLKIKHIQDASG--VRMVAQKEMLPQSTER--IVEIQGTPEGIQKAIWEICKCLI 204
Query: 440 HNLKSG 445
+ + G
Sbjct: 205 DDWQRG 210
>gi|443712210|gb|ELU05631.1| hypothetical protein CAPTEDRAFT_229004 [Capitella teleta]
Length = 679
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 23/164 (14%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFC 87
++ P VG LIG +GS I I RD++ + E P D D
Sbjct: 437 QICVPNSAVGALIGAAGSNIKQIIRDSQAFVTIE---PKKD------------DDPNPAS 481
Query: 88 ENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY-CGLLANTTKIGVVVGK 146
E V ++G + S A VFE++ + EG DDV + +G V+GK
Sbjct: 482 ERIVSIKGTQ-DSIWRASYYVFEKL-----KSEGFSGNDDVRLRTAIRVPQKAVGFVIGK 535
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
GG+NV ++ +GA I+ LP D+ +++ G ++V A
Sbjct: 536 GGKNVREVQRMTGA-IIKLPEDQTVQGDEVVVEAYGTFMSVHSA 578
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQVR 575
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGS-GSIDR 82
+++ P+ G +IG+ G I ++++T I +PG+ RV L+ G+ +++
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
F + V+ T+ + + + V + D + ++ + G+
Sbjct: 112 VHGFIAEKIREMPQNVAKTEP--VSILQPQTTV--------NPDRIKQVKIIVPNSTAGL 161
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLS 202
++GKGG V + +SGA + + P + ++++ ++G +K AV +Q +
Sbjct: 162 IIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRK---AVELIVQKIQ 218
Query: 203 TMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASE 250
+S C N + Y+N + P P TG+P N +E
Sbjct: 219 EDPQSGSCLN-----ISYANVTGPVANSNP--------TGSPYANTAE 253
>gi|391338140|ref|XP_003743419.1| PREDICTED: far upstream element-binding protein 3-like, partial
[Metaseiulus occidentalis]
Length = 502
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 24/176 (13%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
+P + VS P +VG +IGR G IS ++ +T C++ G+ R +++G+
Sbjct: 88 MPSNSVSEEWSVPDKMVGLIIGRDGKQISRLQHETSCKVQLSSESNGTPERPCVLIGTKQ 147
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV----EGDGDGDDVAYCGLLA 135
V +E + + R E + G G G+ V +
Sbjct: 148 A-----------------VEKAKEMISALISRGQETSHKAGSMNGGPGQGEIVE--DMPC 188
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP-PACAAIDDQLIQITGATLAVKKA 190
+K G+V+G+ G + ++ +G K+V+L P + ++ I+ITG V+ A
Sbjct: 189 PASKAGLVIGRNGETIRNLQSRAGVKMVLLQDNPGNSPNAEKPIRITGEPHKVELA 244
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 171/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 187
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 188 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 235
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 236 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 287
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 288 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 347
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 348 YFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 407
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E ++ F+ E +
Sbjct: 408 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---EKFFTPKEEV--KLEAH 456
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 457 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 513
Query: 430 ALSEV 434
A ++
Sbjct: 514 AQRKI 518
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 22/196 (11%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTG------PT 69
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKG----DAVAVSILVGADFVGCLTGSGSSAVS 389
+ + A L+ + E Q F ++ G + + ++V A G L G G S +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQ--FHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 390 EMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILN 449
E+ +VTG I++ ++L + + V ISG + + + + + + G +
Sbjct: 128 EIREVTGASIQVA--SEMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGATI- 182
Query: 450 EARPRSPSGRVGGPAL 465
P P +VGGP +
Sbjct: 183 ---PYRPKPQVGGPLI 195
>gi|155372155|ref|NP_001094687.1| far upstream element-binding protein 3 [Bos taurus]
gi|151554191|gb|AAI49199.1| FUBP3 protein [Bos taurus]
gi|296482076|tpg|DAA24191.1| TPA: far upstream element (FUSE) binding protein 3 [Bos taurus]
Length = 572
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 51 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 110
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 111 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 153
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ + +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 154 -FHNDVDGNSTVQ-EIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 208
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 209 DKPLRITGDPFKVQQA 224
>gi|344251660|gb|EGW07764.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Cricetulus
griseus]
Length = 393
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 93 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 139
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 140 ---KENTGAAEKPIT------------ILSTPEGASAACKSILEIMHKEAQDTKLTEEVP 184
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP 166
+LA+ +G ++GK GRN+ ++ ++ KI + P
Sbjct: 185 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP 220
>gi|426237799|ref|XP_004012845.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Ovis aries]
Length = 576
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 179/435 (41%), Gaps = 61/435 (14%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
+QE+ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMXPEQEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 455
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 456 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 504
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 505 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 560
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 561 QLHQKGQ-SNQAQAR 574
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF---PGSDHRVILVVGSGSI 80
S ++ P VG LIG+ G I ++ ++ +I P S R + ++G+ S
Sbjct: 199 TTSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTTRPVELIGTLSS 258
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
+ N V+ E + + V R A+ G GD + K+
Sbjct: 259 ISKAEKLINAVIAEA-DAGGSPSLVARGL-----PSAQTAGVGD-----QIEMQVPNEKV 307
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITG 182
G+++G+GG + ++ +SGA+I ++P PP A ++ +++TG
Sbjct: 308 GLIIGRGGDTIKALQAKSGARIQLIPQHPPEGDASKERTVRVTG 351
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 181
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 182 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 229
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 230 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 281
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 282 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSG 341
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 342 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 401
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 402 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 450
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 451 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 507
Query: 430 ALSEV 434
A ++
Sbjct: 508 AQRKI 512
>gi|195029383|ref|XP_001987553.1| GH21981 [Drosophila grimshawi]
gi|193903553|gb|EDW02420.1| GH21981 [Drosophila grimshawi]
Length = 512
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 25/192 (13%)
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
D D P K+ R+ E +R+L A +IGK G ++ ++ A +S ++ E
Sbjct: 7 DGDGPQDQKRNRRNEDMVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDD--SQGPE 64
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVG 378
R + ISA +D+ ++E+ + E + D V +L+ G
Sbjct: 65 RTIQISA--DIDS---------------TLEIITEM-LKYFEERDDEFDVRLLIHQSLAG 106
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQN-DVVIQISGEYKNVQNALSEVVGR 437
C+ G G + E+ D G V A Q+ D V+Q G+ V +A+ EV+
Sbjct: 107 CVIGKGGQKIKEIRDRIGCRFLKV----FSNVAPQSTDRVVQTVGKQTQVIDAVREVITL 162
Query: 438 LRHNLKSGEILN 449
R G I N
Sbjct: 163 TRDTPIKGPIHN 174
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 262 HPGLDKKGRKQE-----------VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
HP L GRK E + +R+L G IIGK+G V+ ++ SGA I+ +
Sbjct: 27 HPQLHF-GRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS 85
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
ER+VTI+ + + A++ + ++ S +K V + +
Sbjct: 86 E--GNCPERIVTITG-----PTDAIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRL 137
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
+V A G L G G S + E+ + TG +++ G E+ + + D +IQ
Sbjct: 138 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 192
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 53 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 108
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 109 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 151
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 152 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 198
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 199 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 258
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 259 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 318
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 319 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 364
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 41/164 (25%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVI 72
GP+ + + + P +VG +IGR G I+ ++ +T C+I GG P R+
Sbjct: 99 GPIGNVGGICNEDIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP---ERLC 155
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV---EAEVEGDGD----- 124
+ GS +EAV R E + + + EG GD
Sbjct: 156 TLTGS------------------------REAVNRAKELVLSIVNQRSRTEGIGDMGGSS 191
Query: 125 GDDVAYCG---LLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
G +++ G ++ K+G+++GKGG + +++ +SGAK+V++
Sbjct: 192 GGIMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVI 235
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+G+++G+GG +TR++ E+G KI M P + ++L +TG+ AV +A V + +
Sbjct: 119 VGLIIGRGGEQITRLQSETGCKIQMA--PESGGLPERLCTLTGSREAVNRAKELVLSIVN 176
Query: 200 HLSTME 205
S E
Sbjct: 177 QRSRTE 182
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 181
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 182 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 229
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 230 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 281
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 282 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 341
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 342 YFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 401
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 402 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 450
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 451 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 507
Query: 430 ALSEV 434
A ++
Sbjct: 508 AQRKI 512
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPV 130
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 166/425 (39%), Gaps = 71/425 (16%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 193 PQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 241
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 242 EKPIT------------IHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 289
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G ++GK GRN+ ++ ++ KI + P + D + T+ VK ++ TC +
Sbjct: 290 GRLIGKEGRNLKKIEQDTDTKITISP------LQDLTLYNPERTITVKG---SIETCAKA 340
Query: 201 LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP---------SDNASEF 251
+ K E + + H L+P L N
Sbjct: 341 EEEIMKK---IRESYENDIAAMNLQAH--------LIPGLNLNALGLFPPSSSGIPPPTV 389
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA- 310
+SA A +P ++ + V L IIGK+G ++ L +GA I A
Sbjct: 390 GVASAAAATSYPPFGQQPESETVHL--FIPALAVGAIIGKQGQHIKQLSRFAGASIKIAP 447
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
A + RVV I+ + A ++ + E + F G + + I
Sbjct: 448 AEGPDAKLRVVIITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLEAHI 496
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEYKNVQN 429
V + G + G G V+E++++T ++ +V +Q +ND VV++I+G + Q
Sbjct: 497 KVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQ---TPDENDQVVVKITGHFYACQL 552
Query: 430 ALSEV 434
A ++
Sbjct: 553 AQRKI 557
>gi|50545305|ref|XP_500190.1| YALI0A18161p [Yarrowia lipolytica]
gi|49646055|emb|CAG84122.1| YALI0A18161p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 123/310 (39%), Gaps = 39/310 (12%)
Query: 17 PLNLPDDVVSF--RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILV 74
P L DD R + T G +IG+ G+ ++ +R K + G R++ V
Sbjct: 57 PATLGDDTTQLVLRALVSTKEAGVIIGKDGATVAGLRDAAKVKAGVTKSVAGIPDRILSV 116
Query: 75 VGSGS-IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGL 133
G+ + + R I +V V+ + + V L
Sbjct: 117 AGTAAGVSRAIGLAAAALVAH-----PPSGYVLNLVPPGPQGTTTVR------------L 159
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVM----LPPPACAAIDDQLIQITGATLAVKK 189
L ++G ++GKGG + ++ + G +IV LP + +++++I G LA++
Sbjct: 160 LIPHQRMGSILGKGGVRIKAIQAKYGVRIVASKHRLPHSS-----ERIVEIQGEPLALQT 214
Query: 190 ALVAVTTCLQHLSTMEKSPIC--FN-RPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSD 246
A+ V CL L +KS + +N R +E +E+ SD
Sbjct: 215 AVYTVVQCL--LEEKDKSILVAYYNPRSLEGSMTLREDPEDKEYVSFAGYRGRHQDGGSD 272
Query: 247 NASEFHSSSADADRDHPGLDKKGR-KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA 305
++ ++ +D D L Q + F+G+ IIG+RG +R L+ SGA
Sbjct: 273 TDTDREATVSDHGGDAEALSSSDACVQSTIIPASFAGY----IIGRRGDNIRELRKRSGA 328
Query: 306 LISFAAPLTK 315
IS ++ +
Sbjct: 329 AISISSEYER 338
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|440894384|gb|ELR46853.1| Far upstream element-binding protein 3, partial [Bos grunniens
mutus]
Length = 542
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 35/196 (17%)
Query: 8 YGYSSKRR----------GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCR 57
YGY ++R G L V++ P +VG +IGR G IS I+ ++ C+
Sbjct: 23 YGYGVQKRPLDDGVGNQLGALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCK 82
Query: 58 IHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA 117
I G R ++ G+ + + + ++ +R
Sbjct: 83 IQIASESSGIPERPCVLTGTPE-----------------SIEQAKRLLGQIVDRCRNGPG 125
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML---PPPACAAID 174
D DG+ + +K+G+V+GKGG + +++ +G K+VM+ P P A
Sbjct: 126 -FHNDVDGNSTVQ-EIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA--- 180
Query: 175 DQLIQITGATLAVKKA 190
D+ ++ITG V++A
Sbjct: 181 DKPLRITGDPFKVQQA 196
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPV 130
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPV 130
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDITNSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 366 VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
V V +LV +D +GC+ G G + + +G I ++ + +L CA D ++QISGE
Sbjct: 82 VTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSCALSFDELVQISGE 139
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 102 QEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAK 161
++A+ RV +++ + E + V LL + +IG V+GKGG+ + + ESGA+
Sbjct: 56 EDALFRVHDKVVSEKVHSEDFEEASQVT-VQLLVTSDQIGCVIGKGGQIIQNIYSESGAQ 114
Query: 162 IVMLPPP---ACAAIDDQLIQITGATLAVKKALVAV---TTCLQHL 201
I +L +CA D+L+QI+G + + + + +QHL
Sbjct: 115 IYILKNDHLLSCALSFDELVQISGERPLLGRLFIKLHLFFMIIQHL 160
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ +++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 132/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMRDESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 116
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 117 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 164 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 223
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SG + + + + D +GC+ G +
Sbjct: 224 PLGQTNPAFPGEKLSLHSSEEAQNLMGQPSGLDASPPASTHELTIPNDLIGCIIGRQGTK 283
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 284 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 329
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV-VGRLRHNLKSGEILNEAR 452
TG +++ G +L + + V ISG + + ++ V L K I +
Sbjct: 126 STGAQVQVAG--DMLPNSTERAVT--ISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK 181
Query: 453 PRS-PSGRVGG-------------PALHKLHQSVALS----PEFEQETIAVQGVD 489
P S P GG P L KLHQ +A+ P Q T A G+D
Sbjct: 182 PASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQ-LAMQQTPFPPLGQTTPAFPGLD 235
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 25/139 (17%)
Query: 20 LPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGS 79
P D V +RL+ P VG +IGR G +I + +T+ RI G P R++L+ G
Sbjct: 23 WPGDNV-YRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKEE 81
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCG------- 132
+ +S +AV+RVF+R V G+GD A G
Sbjct: 82 PE--------------AALSPAIDAVLRVFKR---VSGPSAGEGDATGSAVAGAAFSSVR 124
Query: 133 LLANTTKIGVVVGKGGRNV 151
LL +++ ++GK G +
Sbjct: 125 LLVASSQAINLIGKQGSTI 143
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 36 VGGLIGRSGSIISSIRRDTKCRIHCE---GGFPGSDHRVILVVGSGSIDRRIMFCENDVV 92
VG +IG+SG I +++ + +I PGS R + + G+ R N+V+
Sbjct: 129 VGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQLINEVL 188
Query: 93 VEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVT 152
E SS + R + G D + N K+G+V+GKGG +
Sbjct: 189 AEADAASSG-----NLSSRKYNAPQP------GADQFQMKIANN--KVGLVIGKGGETIK 235
Query: 153 RMRIESGAKIVMLP---PPACAAID 174
M+ +SGA+I ++P PP A +
Sbjct: 236 SMQAKSGARIQVVPLHLPPGDPATE 260
>gi|346473549|gb|AEO36619.1| hypothetical protein [Amblyomma maculatum]
Length = 320
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 43/234 (18%)
Query: 254 SSADADRDHPGLDKKGRK----QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF 309
SS D D+ +K+ R + V +R L A IIGK G + SL+ A IS
Sbjct: 15 SSDDGRADNEAPNKRPRNSGGGRAVDVRFLLQSRNAGAIIGKGGTNINSLRKEFKASISV 74
Query: 310 AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLV--FARSVEVEGQQGFSSGENKGDAVA 367
P ER+++I A LDT + N + FA+ +G+N G
Sbjct: 75 --PDCPGPERILSIVA--DLDTLGDILLNIIPKLDDFAQH----------TGQNGGSESE 120
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
+ +L+ GC+ G + E+ + TG +IK+ G C + +++++G V
Sbjct: 121 MRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGS----CCPGSTERIVKVTGSPAVV 176
Query: 428 QNALSEVVGRLRHNLKSGEILNEARPRSPSGRVGGPALHKLHQSVALSPEFEQE 481
+ + ++ +I+ A + L+K + PEF QE
Sbjct: 177 VDCIKQIC----------DIIGVAPIK---------GLNKPYDPHNFDPEFSQE 211
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 41/164 (25%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVI 72
GP+ + + + P +VG +IGR G I+ ++ +T C+I GG P R+
Sbjct: 99 GPIGNVGGICNEDIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP---ERLC 155
Query: 73 LVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV---EAEVEGDGD----- 124
+ GS +EAV R E + + + EG GD
Sbjct: 156 TLTGS------------------------REAVNRAKELVLSIVNQRSRTEGIGDMGGSS 191
Query: 125 GDDVAYCG---LLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
G +++ G ++ K+G+++GKGG + +++ +SGAK+V++
Sbjct: 192 GGLMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVI 235
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+G+++G+GG +TR++ E+G KI M P + ++L +TG+ AV +A V + +
Sbjct: 119 VGLIIGRGGEQITRLQSETGCKIQMA--PESGGLPERLCTLTGSREAVNRAKELVLSIVN 176
Query: 200 HLSTME 205
S E
Sbjct: 177 QRSRTE 182
>gi|357144424|ref|XP_003573287.1| PREDICTED: uncharacterized protein LOC100834117 [Brachypodium
distachyon]
Length = 707
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 36 VGGLIGRSGSIISSIRRDTKCRIH-CEGGFPGSDH--RVILVVGSG-SIDRRIMFCENDV 91
VG LIG++G I +++ + +I + G SD R + +VG+ SID+ ++ V
Sbjct: 170 VGVLIGKNGETIRNLQNSSGAKIQITKDGEVASDALTRPVELVGTQESIDKAEQLIKS-V 228
Query: 92 VVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNV 151
+ E E + + + F + E + K+G+++GKGG +
Sbjct: 229 IAEA-EAGGSPALIAKGFGPGQSGSEQFE------------MSVPDNKVGLIIGKGGETI 275
Query: 152 TRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
M+ SGA+I ++P PP + ++ +++TG ++ A + + +
Sbjct: 276 KNMQTRSGARIQLIPQHPPEGTTLTERTVRVTGNKKQIEAAKELIKQAMNQV 327
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 20/126 (15%)
Query: 288 IIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL----EYLDTRHSPVQNAAVLV 343
+IGK G +R+LQN+SGA I +TK GE V AL E + T+ S + A L+
Sbjct: 173 LIGKNGETIRNLQNSSGAKIQ----ITKDGE--VASDALTRPVELVGTQES-IDKAEQLI 225
Query: 344 FARSVEVEG-------QQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTG 396
+ E E +GF G++ + +S+ + VG + G G + M+ +G
Sbjct: 226 KSVIAEAEAGGSPALIAKGFGPGQSGSEQFEMSVPD--NKVGLIIGKGGETIKNMQTRSG 283
Query: 397 TDIKLV 402
I+L+
Sbjct: 284 ARIQLI 289
>gi|444727083|gb|ELW67590.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Tupaia
chinensis]
Length = 644
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 116/303 (38%), Gaps = 56/303 (18%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
S ++ P +LP RL+ PT VG +IG+ G+ I +I + T+ +I HR
Sbjct: 255 SVSKQKPCDLP-----LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDV--------HR 301
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAY 130
+G+ ++ I + ST E + + E+ + D +
Sbjct: 302 ---KENAGAAEKSIT------------ILSTPEGTSAACKSILEIMYKEAQDIKFTEEIP 346
Query: 131 CGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
+LA+ +G ++GK GRN+ ++ ++ KI + P + + + T+ VK
Sbjct: 347 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISP------LQELTLYNPERTITVKG- 399
Query: 191 LVAVTTCLQ-HLSTMEKSPICFNRPIEKVFYSNSSDPHRE-----FFPHLSLVPPLTGNP 244
V TC + M+K + I + P FP S +PP T P
Sbjct: 400 --NVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGIPPPTSGP 457
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
+ P + + + + + + IIGK+G ++ L +G
Sbjct: 458 PSAMT-------------PPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAG 504
Query: 305 ALI 307
A I
Sbjct: 505 ASI 507
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 187
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 188 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 235
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 236 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 287
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 288 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 347
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 348 YFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 407
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 408 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 456
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 457 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 513
Query: 430 ALSEV 434
A ++
Sbjct: 514 AQRKI 518
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ LR++ G IIGK+G IV+ + SGA I+ + ER+VTIS
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTISG------ST 64
Query: 334 SPVQNAAVLVFARSVE-VEGQQGFSSGENKGDA-VAVSILVGADFVGCLTGSGSSAVSEM 391
+ A L+ + E +E Q G + G + + ++V A G L G G + + E+
Sbjct: 65 EAIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEI 124
Query: 392 EDVTGTDIKL 401
+ TG I++
Sbjct: 125 REATGAQIQV 134
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 43/193 (22%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ RL+ VG +IG+ G I+ R ++ +I+ + GS RI
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKIN---------------ISDGSCPERI 57
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMW-EVEAEVE---GDGDGDDVAYCG----LLAN 136
+ +S + EA+ + F + +VE +E G + CG L+
Sbjct: 58 V-----------TISGSTEAIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVP 106
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
++ G ++GKGG + +R +GA+I + D L Q T + + ++T
Sbjct: 107 ASQCGSLIGKGGNKIKEIREATGAQIQVA--------SDVLPQSTERAVTLTGTRDSITQ 158
Query: 197 CLQHL-STMEKSP 208
C+ H+ + M +SP
Sbjct: 159 CIFHICAVMVESP 171
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 202 PQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 250
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 251 EKPIT------------IHSTPEGCSAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 298
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 299 GRLIGKEGRNLKKIEQDTDTKITISP 324
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISE--GNCPERIVTITG-----PTD 68
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + EM +
Sbjct: 69 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEMRE 127
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 128 STGAQVQVAG 137
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 118 EVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQL 177
+V+ +G + LL + ++G ++GK G V +MR +SGA+I + + +++
Sbjct: 5 KVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI----SEGNCPERI 60
Query: 178 IQITGATLAVKKALVAVTTCLQH--LSTMEKSPICFNRPI 215
+ ITG T A+ KA + + +++M SP P+
Sbjct: 61 VTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 100
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 181/432 (41%), Gaps = 62/432 (14%)
Query: 5 SNPYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF 64
S+P G S ++ L+ P R++ PT VG +IG+ G I ++ + T+ ++
Sbjct: 168 SSPGGSSQPKQ--LDFP-----LRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDI---- 216
Query: 65 PGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD 124
HR +G+ ++ I EG EA + + M + E +
Sbjct: 217 ----HRK---ENAGAAEKPITI---HATPEG-----CSEACRMILDIM---QKEADETKS 258
Query: 125 GDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGA 183
+++ +LA+ + +G ++GK GRN+ ++ ++G KI + P + ++ I + G+
Sbjct: 259 AEEIP-LKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDLTIYNPERTITVKGS 317
Query: 184 TLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGN 243
T A A V + L+ E + N+ + N S F LS++P
Sbjct: 318 TEACSNAEVEIMKKLRE--AYENDIVAVNQQANLIPGLNLSA-LGIFSTGLSMLP----- 369
Query: 244 PSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNAS 303
+S +A A HP +QEV + + IIGK+G ++ L +
Sbjct: 370 ----SSAGARGAAAAAPYHPFALP---EQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFA 421
Query: 304 GALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENK 362
GA I A A + ER+V I+ + A +F + E + F+ E
Sbjct: 422 GASIKIAPAEGPDATERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV 472
Query: 363 GDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ I V + G + G G V+E++++T ++ +V +Q +V+++I G
Sbjct: 473 --KLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVKIIG 527
Query: 423 EYKNVQNALSEV 434
+ Q A ++
Sbjct: 528 HFFASQTAQRKI 539
>gi|321477777|gb|EFX88735.1| hypothetical protein DAPPUDRAFT_311062 [Daphnia pulex]
Length = 727
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+G+++G+GG ++R++ ESGAKI M P A + D+ ITG+ A+ +A + +Q
Sbjct: 130 VGLIIGRGGEQISRLQAESGAKIQMA--PDSAGLPDRTCTITGSREAIGRARELINNIVQ 187
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 187
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 188 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 235
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 236 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 287
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 288 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSG 347
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 348 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 407
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 408 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 456
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 457 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 513
Query: 430 ALSEV 434
A ++
Sbjct: 514 AQRKI 518
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 269 GRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY 328
G + +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 9 GLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG--- 63
Query: 329 LDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAV 388
+ + A++ + ++ S +K V + ++V A G L G G S +
Sbjct: 64 --PTDAIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKI 120
Query: 389 SEMEDVTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
E+ + TG +++ G E+ + + D +IQ
Sbjct: 121 KEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIVNSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIVNSMSNSPATSKPPV 98
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 181
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 182 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 229
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 230 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 281
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 282 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 341
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 342 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 401
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 402 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 450
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 451 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 507
Query: 430 ALSEV 434
A ++
Sbjct: 508 AQRKI 512
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 47/312 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
R + G +IG+ GS I+ + + RI FPG++ R+I+V G
Sbjct: 42 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG------- 94
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVAYCGLLANTTKIGV 142
+F E V++ E + E + AE E + + L+ + G
Sbjct: 95 -LFDE----------------VMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGG 137
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPP-ACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++GKGG + ES A I + P + D+L+ +TG + A+ L+ L
Sbjct: 138 IIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTVTG---TFDNQMNAIDLILKKL 194
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRD 261
S P + P Y+ + P+ P ++P + P +NA + ++ R
Sbjct: 195 SEDVHYPPNLSSPFP---YAGLTFPNYPGVPVGYMIPQV---PYNNAVNYGPNNGYGGRY 248
Query: 262 H------PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP--- 312
P + + +L + + ++G+ G + + ASGA I +
Sbjct: 249 QNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDF 308
Query: 313 LTKSGERVVTIS 324
++ + +R VTI+
Sbjct: 309 ISGTSDRKVTIT 320
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISAL 326
+++ LR L S A IIGK G+ + Q+ SGA I + + +R++ +S L
Sbjct: 36 KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGL 95
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
V A L+ + + EG++ F+ E + V ++V G + G G +
Sbjct: 96 ------FDEVMKAMELILEKLL-AEGEE-FNEAEAR---PKVRLVVPNSSCGGIIGKGGA 144
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ + + IK+ Q +D ++ ++G + N NA+ ++ +L ++
Sbjct: 145 TIKSFIEESHAGIKI--SPQDNNYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDV 198
>gi|449676986|ref|XP_002155841.2| PREDICTED: uncharacterized protein LOC100213921 [Hydra
magnipapillata]
Length = 643
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAID-DQLIQITGATLAVKKA 190
+G+V+G+GG + R++ +SGAKI + P P +D D+ I ITG++ AV KA
Sbjct: 44 VGLVIGRGGEMINRLQSDSGAKIQVAPDPPPNMMDIDRQITITGSSEAVSKA 95
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 19/173 (10%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
K+ R+ + LR+L A IIGK G + L++ A S P ERV+TIS+
Sbjct: 75 KRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKA--SIIVPDCPGPERVLTISS- 131
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
P + ++E G + S D + V +LV GC+ G G
Sbjct: 132 ------DLPTVLQVLNEVVPNLEENGSRHGS------DEIDVRMLVHQSQAGCIIGKGGL 179
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
+ E+ + TG IK+ C D +I I G+ + E++ ++
Sbjct: 180 KIKELREKTGARIKIYSH----CCPHSTDRLISICGKPTTCIECIRELIATIK 228
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 46/203 (22%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
RL+ P+ V G +IG+ G I+ +R S ++ ++V R++
Sbjct: 84 LRLLIPSKVAGSIIGKGGQNITKLR---------------SQYKASIIVPDCPGPERVLT 128
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGD--GDDVAYCGLLANTTKIGVVV 144
+D+ V + + EV +E +G G D +L + ++ G ++
Sbjct: 129 ISSDLPT--------------VLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCII 174
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GKGG + +R ++GA+I + C D+LI I G K + + ++T+
Sbjct: 175 GKGGLKIKELREKTGARIKIY-SHCCPHSTDRLISICG------KPTTCIECIRELIATI 227
Query: 205 EKSPICFNRPIEKVFYSNSSDPH 227
+ SP+ +N DPH
Sbjct: 228 KTSPL--------KGVNNPYDPH 242
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 285 ASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
A IIGK GA +R +++ SGA I+ PL+ S +R++TI+ L
Sbjct: 419 AGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGL 460
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 101
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 102 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 160
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 161 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 192
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 133/350 (38%), Gaps = 83/350 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 53 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 108
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 109 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 151
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 152 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 198
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI-----------SALEYLDTRHSPV-- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 199 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPP 258
Query: 337 ---QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAV 388
N A L S E + G SSG + + + + D +GC+ G + +
Sbjct: 259 LGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKI 318
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
+E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 319 NEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 363
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 111
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 112 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 170
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 171 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 202
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 63 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 118
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 119 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 161
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 162 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 208
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 209 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 268
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 269 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 328
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 329 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 374
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA-LISFAAPLTKSGERVVTIS------ 324
+ V +R + +IGK+G+ ++ +Q ASGA L + A L S ERV++IS
Sbjct: 628 KSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTERVLSISGVADAV 687
Query: 325 --ALEYLDT--RHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA--------------- 365
A+ Y+ + P +NA L + + + ++G N A
Sbjct: 688 HIAVYYVGSILLEHPDRNANNLPYRPTAGGPSTRAGAAGANPYAAPQQPFGYGAPAAGFG 747
Query: 366 ----------------VAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV-GGEQVL 408
I + D VGC+ G G S ++E+ ++ + IK++ G +
Sbjct: 748 GAPAGAGGAPQLPPGSQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIA 807
Query: 409 GCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
+ N+ ++ I+G N+Q A+S + RL
Sbjct: 808 AGGSGNERLVTITGPPPNIQMAVSLLYQRL 837
Score = 38.9 bits (89), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 46/186 (24%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS------- 77
+S R + T +IG+SG I+ IR + R++ PG+ R++ V G
Sbjct: 547 ISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLDAVSKA 606
Query: 78 -GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
G I RRI ND + V ++ IR +
Sbjct: 607 FGLIVRRI----NDEPFDLASVPGSKSVTIR-------------------------FIVP 637
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
+++G V+GK G + ++ SGA++ MLP ++++ I+G AV A+
Sbjct: 638 NSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLP-----GSTERVLSISGVADAVHIAVY 692
Query: 193 AVTTCL 198
V + L
Sbjct: 693 YVGSIL 698
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 44/220 (20%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGS 77
N+ V+ RLV P G LIG++G+ I IR T ++ G FP S R + V G
Sbjct: 96 NVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSG- 154
Query: 78 GSIDRRIMFCENDVV---------------------------------VEGGEVSSTQEA 104
+ I+ C + V+G + TQ
Sbjct: 155 --VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTQRE 212
Query: 105 VIRVFERM-----WEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESG 159
V ++ + + + V G G + L IG V+G+ G ++ +R SG
Sbjct: 213 VTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSG 272
Query: 160 AKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
A I + ++ + ITG+ +++ A +T CL+
Sbjct: 273 AHIKI--GNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 42/165 (25%)
Query: 16 GPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC--EGGFPGSDHRVIL 73
GP+ + + + P +VG +IGR G I+ ++ +T C+I E G P RV
Sbjct: 97 GPIGNVGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGLP---ERVCT 153
Query: 74 VVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEV---EAEVEGDGDGDDV-- 128
+ GS +EAV R E + + + EG GD +
Sbjct: 154 LTGS------------------------REAVNRAKELVLSIVNQRSRTEGIGDMNMSGS 189
Query: 129 --------AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVML 165
+ ++ K+G+++GKGG + +++ +SGAK+V++
Sbjct: 190 SGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVI 234
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
+G+++G+GG +TR++ E+G KI M P + + +++ +TG+ AV +A V + +
Sbjct: 117 VGLIIGRGGEQITRLQSETGCKIQMAPE---SGLPERVCTLTGSREAVNRAKELVLSIVN 173
Query: 200 HLSTME 205
S E
Sbjct: 174 QRSRTE 179
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 256 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 315
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 201 PQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 249
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 250 EKPIT------------IHSTPEGCSAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 297
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 298 GRLIGKEGRNLKKIEQDTDTKITISP 323
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 133/350 (38%), Gaps = 83/350 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI-----------SALEYLDTRHSPV-- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPP 255
Query: 337 ---QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAV 388
N A L S E + G SSG + + + + D +GC+ G + +
Sbjct: 256 LGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKI 315
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
+E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 NEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 360
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 256 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 315
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 133/350 (38%), Gaps = 83/350 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI-----------SALEYLDTRHSPV-- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPP 255
Query: 337 ---QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAV 388
N A L S E + G SSG + + + + D +GC+ G + +
Sbjct: 256 LGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKI 315
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
+E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 NEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 360
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 97
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 98 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 156
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 157 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 188
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 49 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 104
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 105 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 147
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 148 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 194
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 195 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 254
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 255 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 314
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 315 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 360
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 175 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 223
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 224 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 271
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 272 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 323
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 324 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG 383
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 384 YFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 443
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 444 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 492
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 493 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 549
Query: 430 ALSEV 434
A ++
Sbjct: 550 AQRKI 554
>gi|324511113|gb|ADY44637.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 581
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DV+ + P VG +IGR G IS I+ + CR+ P SD G+ R
Sbjct: 32 DVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMS---PESD---------GNNMR 79
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG--DGDGDDVAYCGLLANTTKI 140
+ + VE + S Q+ + R R +G G G + + +L K
Sbjct: 80 QCTLQGTKMAVERAK-SMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHE-MLIPGAKC 137
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+V+GKGG + ++ ++G K+VM+ + + ++I G V A V LQ
Sbjct: 138 GLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRIIGEPDKVDTARRMVEDILQ 196
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 256 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 315
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 246 DNASEFHSSSADADRDHPGLDKKGR-KQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
DN +E +S + D H G+ + LRML AS ++G +G V +++ +
Sbjct: 38 DNEAEPQNSELNGDGTHLTEKDSGQVPNYINLRMLCLMKQASKVVGGKGERVNRIKSETN 97
Query: 305 ALISFAAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGD 364
I+ + + ERV+ ++ + V A F + V + +
Sbjct: 98 TRINVSDNINGVMERVI------FVRGKCEEVARA----FGKIVRAINNESDDDSNERSL 147
Query: 365 AVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISG 422
+ V++L+ F+GC+ G S + E+ED++ +L+ Q L + ND ++ ++G
Sbjct: 148 PLVVNLLIPHHFMGCIIGRQGSRLHEIEDLSAA--RLMASPQQLPMS--NDRILSLTG 201
>gi|72013105|ref|XP_781909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 447
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 82/212 (38%), Gaps = 36/212 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI---HCEGGFPGSDHRVILVVGSGSID 81
+ FRL+ + GG+IG+ G I +R D ++ C G I+ +G+ ++D
Sbjct: 35 IIFRLMIRSINAGGVIGKGGENIKRLRVDYDAKVSIPDCNG------PERIIKIGTRNVD 88
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
I C D++ GE +Q+ F R ++ + + G
Sbjct: 89 NAID-CIKDIIPSVGEKKHSQDQQNNSFIR---------------------IMVHQSHAG 126
Query: 142 VVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++G+ G + +R ++GA + C D+++Q+TG+ + KA V
Sbjct: 127 AIIGRAGFKIKELREKTGAHFKVY-TETCPKSTDRVVQLTGSPDVIAKAAREVYEICTET 185
Query: 202 S----TMEKSPICFNRPIEKVFYSNSSDPHRE 229
+ + P C + + DP E
Sbjct: 186 AVKGPVQDYDPFCHDLDFYNQYGGYLFDPAEE 217
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 176/440 (40%), Gaps = 70/440 (15%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKTLAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHRE-----FFPHLSLVPPLTGNPSDNASEFHSSSADAD 259
+K + + + + P FP S P + A+ + S +
Sbjct: 345 KKVREAYENDVAAMSLQSHLTPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYSSFMQAPE 404
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGE 318
++ +++ IIGK+G ++ L + A I A P T S
Sbjct: 405 QE-------------MVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKV 451
Query: 319 RVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVG 378
R+V I+ + A ++ + E + F G + + I V A G
Sbjct: 452 RMVIITGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAG 500
Query: 379 CLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEV 434
+ G G V+E++++T ++ +V +Q +ND V+++I G + + Q + ++
Sbjct: 501 RVIGKGGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDI 556
Query: 435 VGRLRHNLKSGEILNEARPR 454
+ +++ + G+ N+A+ R
Sbjct: 557 LAQVKQQHQKGQ-SNQAQAR 575
>gi|327274617|ref|XP_003222073.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Anolis carolinensis]
Length = 584
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 193 PQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 241
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 242 EKPIT------------IHSTPEGCSSACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 289
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 290 GRLIGKEGRNLKKIEQDTDTKITISP 315
>gi|308482412|ref|XP_003103409.1| hypothetical protein CRE_28670 [Caenorhabditis remanei]
gi|308259830|gb|EFP03783.1| hypothetical protein CRE_28670 [Caenorhabditis remanei]
Length = 304
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D +S +++ P+ V +IGRSG + ++R+ C+I +PG+ R+ V G
Sbjct: 28 DHLSIKILIPSSAVCDIIGRSGETMRNLRKKNSCQIQISKDGDTYPGTTERICFVKG--- 84
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA-EVEGDGDGDDVAYCGLLANTT 138
R+ N +V + S QE + + +A ++E GD++ ++ T
Sbjct: 85 ---RL----NHIV---AVIESIQEKIRKKCPNQTGNDAFDLENTLRGDEIK---IVMPNT 131
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLP 166
G+V+GK N+ ++ G+K+ + P
Sbjct: 132 SAGMVIGKSSNNLKLIKKRFGSKVEIYP 159
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 133/350 (38%), Gaps = 83/350 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI-----------SALEYLDTRHSPV-- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPP 255
Query: 337 ---QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAV 388
N A L S E + G SSG + + + + D +GC+ G + +
Sbjct: 256 LGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKI 315
Query: 389 SEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
+E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 NEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 360
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QLHQKGQ-SNQAQAR 575
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQITGATLAVKKA 190
LL IG ++G+GG V MR ++ A I++ P A+ D+L++++G ++ A
Sbjct: 5 LLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLRDA 64
Query: 191 LVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSD-------PHREFFPHLSLVPPL--- 240
LV + L+ + +++S N + +SD P PH + PL
Sbjct: 65 LVQIILRLRE-AVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAPLGYD 123
Query: 241 -TGNPSDNASEF-------HSSSADADRDHPGLDK---KGRKQEVA-LRMLFSGWTASGI 288
G P F +SS D + GL K ++ V L M S +
Sbjct: 124 RRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASGISKV 183
Query: 289 IGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRHS 334
+GK G + +++ SGA I P + E + IS + RHS
Sbjct: 184 MGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYISGTS--EQRHS 227
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 368 VSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNV 427
+ +LV +GCL G G S V++M T +I + G++ A+ +D ++++SGE +
Sbjct: 3 LRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDKPR-RASSSDELVEVSGEADKL 61
Query: 428 QNALSEVVGRLR 439
++AL +++ RLR
Sbjct: 62 RDALVQIILRLR 73
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 18/91 (19%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ RL+ P V+G LIGR GSI++ +R+ TK I ++ G RR
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI---------------LISKGDKPRRA 45
Query: 85 MFCENDVVVE-GGEVSSTQEAVIRVFERMWE 114
+D +VE GE ++A++++ R+ E
Sbjct: 46 --SSSDELVEVSGEADKLRDALVQIILRLRE 74
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 196 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 255
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 256 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 315
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 316 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 91/435 (20%), Positives = 175/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HRK---ENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A + C + +
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGA---IENCCRAEQEI 343
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
K E + S H P L+L G ++S + P
Sbjct: 344 TKK---VREAYENDVAAMSLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVSGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND VV++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVVVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QQHQKGQ-SNQAQAR 575
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 139 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 187
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 188 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 235
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 236 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 287
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 288 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 347
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 348 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 407
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 408 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 456
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 457 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 513
Query: 430 ALSEV 434
A ++
Sbjct: 514 AQRKI 518
>gi|324500869|gb|ADY40396.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 581
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DV+ + P VG +IGR G IS I+ + CR+ P SD G+ R
Sbjct: 32 DVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMS---PESD---------GNNMR 79
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG--DGDGDDVAYCGLLANTTKI 140
+ + VE + S Q+ + R R +G G G + + +L K
Sbjct: 80 QCTLQGTKMAVERAK-SMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHE-MLIPGAKC 137
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+V+GKGG + ++ ++G K+VM+ + + ++I G V A V LQ
Sbjct: 138 GLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRIIGEPDKVDTARRMVEDILQ 196
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 107/241 (44%), Gaps = 36/241 (14%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G ++G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 140 LLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERIVEVQGNPEGIQ 194
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEK--------VFYSNSSDPHREFFPHLSLVPPL 240
KA+ + CL + +N P+ + + N RE+ +
Sbjct: 195 KAVWEICKCLVDDWARGTGTVLYN-PVVRTQTGGSGGMSQGNLGGTGREYGSSRVMRTGN 253
Query: 241 TGNPSDNASEFHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGA 294
+ S+ A ++ +D+D R P D+ G + Q +++ G IIG+ G+
Sbjct: 254 GADFSEGAPRSYNRRSDSDAAQRGPPTHDENGEELQTQNISIPSDMVGC----IIGRAGS 309
Query: 295 IVRSLQNASGALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ 353
+ ++ SGA IS A +P ++GER+ TI + ++A+ + ++E E Q
Sbjct: 310 KISEIRKTSGARISIAKSPHDETGERMFTIMGT-------AKANDSALYLLYENLEAEKQ 362
Query: 354 Q 354
+
Sbjct: 363 R 363
>gi|149723930|ref|XP_001502310.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Equus caballus]
Length = 577
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QLHQKGQ-SNQAQAR 575
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 34/249 (13%)
Query: 7 PYGYSSKRRGPLNLPDDVVSF-RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-- 63
P S+KR N +D F +++ P+ G +IG+ G I ++++T I
Sbjct: 33 PEAGSTKRT---NTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 89
Query: 64 -FPGSDHRVILVVGS-GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG 121
+PG+ RV L+ G+ +++ F + V+ T+ + + + V
Sbjct: 90 FYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEP--VSILQPQTTV------ 141
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQIT 181
+ D + ++ + G+++GKGG V + +SGA + + P + ++++ ++
Sbjct: 142 --NPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVS 199
Query: 182 GATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLT 241
G +K AV +Q + +S C N + Y+N + P P T
Sbjct: 200 GEPEQNRK---AVELIIQKIQEDPQSGSCLN-----ISYANVTGPVANSNP--------T 243
Query: 242 GNPSDNASE 250
G P N +E
Sbjct: 244 GFPYANTAE 252
>gi|402593291|gb|EJW87218.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 359
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 122 DGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLP--PPACAAIDDQLIQ 179
+GD + +L +++ G V+G+ G + M+ E G ++ + PP Q
Sbjct: 113 EGDSNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPP----------Q 162
Query: 180 ITGATLAVKKALVAVTTCLQHLSTMEKS-PIC-FNRPIEKVFYSNS-SDPHREFFPHLSL 236
T +++K A + C+ H+ M K PI +P E +FY S S + + P +
Sbjct: 163 STERVVSIKGAPDKILACVNHIMNMLKEIPIKGVTKPYESMFYDPSYSSEYGGYPPDRNY 222
Query: 237 VPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVAL----------RMLFSGWTAS 286
P+ P S + + R G +G VAL ++
Sbjct: 223 RGPMIRGPMAVTS-YGNYGRSFQRQIGG---RGPLSAVALPPYMGPEESTQVTIPNELGG 278
Query: 287 GIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEY-LDTRHSPVQNAAVLV 343
IIGK G + ++ SGA I P +SGER++TI+ + T +Q VLV
Sbjct: 279 TIIGKGGERINRVREESGAQI-VVGPQQESGERIITITGTSTAIQTAQYLLQQWLVLV 335
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 132/326 (40%), Gaps = 62/326 (19%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
++ R + + G +IG+ G ++++R +T + G RV+ + G
Sbjct: 49 TLTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGG------ 102
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD---GDGDDVAYCG-----LLA 135
C+ VS AV R +EG G G ++ G LL
Sbjct: 103 ---CD--------AVSKAYAAVARSL---------LEGAPSVGMGGVISANGTHPLKLLI 142
Query: 136 NTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKAL 191
+ ++G V+G+ G + ++ SG ++V MLP ++++++ G +++A+
Sbjct: 143 SHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERVVEVQGTPEGIERAV 197
Query: 192 VAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPL---TGNPSD-- 246
+ CL + +N P+ + + S R + S TGN +D
Sbjct: 198 WEICKCLVDDWQRGTGTVLYN-PVVRGPGAPVSGGERNYPQERSYGSSRVTRTGNGADFS 256
Query: 247 -----NASEFHSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRS 298
A S S A R P D+ G + Q +++ G IIG+ G+ +
Sbjct: 257 SNSGGRAYNRRSDSDAASRGPPTHDENGEEIQTQNISIPADMVGC----IIGRAGSKISE 312
Query: 299 LQNASGALISFA-APLTKSGERVVTI 323
++ SGA IS A P +SGER+ TI
Sbjct: 313 IRKQSGARISIAKGPHDESGERMFTI 338
>gi|73966275|ref|XP_548184.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Canis lupus familiaris]
gi|301762950|ref|XP_002916873.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Ailuropoda melanoleuca]
gi|410980809|ref|XP_003996768.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Felis catus]
gi|281344391|gb|EFB19975.1| hypothetical protein PANDA_005026 [Ailuropoda melanoleuca]
Length = 577
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QLHQKGQ-SNQAQAR 575
>gi|346324545|gb|EGX94142.1| KH domain RNA-binding protein [Cordyceps militaris CM01]
Length = 420
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 58/326 (17%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG+ G ++ +R +T + G RV+ + G R
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAISRA 106
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
++EG + V+G+G LL + ++G V+
Sbjct: 107 YAIVARALLEGAPAMG--------------MGGVVQGNG----THPIKLLISHNQMGTVI 148
Query: 145 GKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G+ G + ++ SG ++V MLP ++++++ G +++AL + CL
Sbjct: 149 GRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQRALWEICKCLVD 203
Query: 201 LSTMEKSPICFNRPIEKV------------FYSNSSDPHREFFPHLSLVPPLTGNPSD-- 246
+ +N P+ + ++ + + E+ + TGN SD
Sbjct: 204 DWQRGTGTVLYN-PVVRTQAGTTGSTGSTGSFAATGNTRAEYSTPRVM---RTGNGSDFS 259
Query: 247 --NASEFHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIVRS 298
S S +D+D R P D+ G + Q +++ G IIG+ G+ +
Sbjct: 260 NGGGSRPFSRRSDSDAASRGPPTHDENGEEIQTQNISIPADMVGC----IIGRAGSKISE 315
Query: 299 LQNASGALISFA-APLTKSGERVVTI 323
++ SGA IS A AP ++GER+ TI
Sbjct: 316 IRKTSGARISIAKAPHDETGERMFTI 341
>gi|440910511|gb|ELR60305.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Bos grunniens
mutus]
Length = 577
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QLHQKGQ-SNQAQAR 575
>gi|166796167|gb|AAI59042.1| igf2bp3 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 167 PQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 215
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 216 EKPIT------------IHSTPEGCSAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 263
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 264 GRLIGKEGRNLKKIEQDTDTKITISP 289
>gi|300794399|ref|NP_001179383.1| insulin-like growth factor 2 mRNA-binding protein 1 [Bos taurus]
gi|296476533|tpg|DAA18648.1| TPA: insulin-like growth factor 2 mRNA binding protein 1-like [Bos
taurus]
Length = 577
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVTGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QLHQKGQ-SNQAQAR 575
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 262 HPGLDKKGRKQE-----------VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
HP L GRK E + +R+L G IIGK+G V+ ++ SGA I+ +
Sbjct: 24 HPQLHF-GRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINIS 82
Query: 311 APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSI 370
ER+VTI+ + + A++ + ++ S +K V + +
Sbjct: 83 E--GNCPERIVTITG-----PTDAIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRL 134
Query: 371 LVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
+V A G L G G S + E+ + TG +++ G E+ + + D +IQ
Sbjct: 135 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 128/326 (39%), Gaps = 60/326 (18%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQNAS 303
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 304 GALI-------SFAAP---LTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ 353
++ +A P LTK + + + L + +P L S E +
Sbjct: 196 VVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG-QTNPAFPGEKLPLHSSEEAQNL 254
Query: 354 QGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
G SSG + + + + D +GC+ G + ++E+ ++G IK+ +
Sbjct: 255 MGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----G 309
Query: 413 QNDVVIQISGEYKNVQNALSEVVGRL 438
++ I I+G N+ A + RL
Sbjct: 310 SSERQITITGTPANISLAQYLINARL 335
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 84/427 (19%), Positives = 167/427 (39%), Gaps = 71/427 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ R++ PT VG +IG+ G I ++ + T +I HR +G+ ++ I
Sbjct: 195 IPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDI--------HR---KENAGAAEKPI 243
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
+ ST E + E+ + D + +L + +G ++
Sbjct: 244 T------------IHSTPEGSSNACRTIMEIMQKEAIDTKFTEEIPLKILVHNNFVGRLI 291
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++G KI + +++ D + T+ VK A+ + + M
Sbjct: 292 GKEGRNLKKIEQDTGTKITI------SSLQDLTVYNPERTITVKGAIENCGRAEEEV--M 343
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + ++ P L L P +G P S SS H G
Sbjct: 344 KKIREAYESDVAAMNLQSNLIPGLNLN-ALGLFP--SGTPGMGPS---MSSLPPPGAHGG 397
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
G + + + IIGK+G ++ L + +GA I I+
Sbjct: 398 YSFGGNPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIK--------------IA 443
Query: 325 ALEYLDTRHSPV---------QNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGAD 375
E +D +H V A +F + E + F G + + I V +
Sbjct: 444 PAEGMDPKHRMVIIVGPPEAQFKAQCRIFGKLKE----ENF-FGPKEEVKLEAHIKVPSF 498
Query: 376 FVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEY---KNVQNALS 432
G + G G V+E++++T ++ +V +Q ++ V+++I G + + Q +
Sbjct: 499 AAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTPD--EKDQVIVKIIGHFFACQLAQRKIQ 555
Query: 433 EVVGRLR 439
E++ ++R
Sbjct: 556 EILAQVR 562
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 263 PGLDKKGRKQ-EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVV 321
P L + + Q ++ LRML IIGK+G +R+L + + I R
Sbjct: 183 PSLGARPKVQSDIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDI--------HRKE 234
Query: 322 TISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLT 381
A E T HS + ++ R++ +E Q + + + + ILV +FVG L
Sbjct: 235 NAGAAEKPITIHSTPEGSSNA--CRTI-MEIMQKEAIDTKFTEEIPLKILVHNNFVGRLI 291
Query: 382 GSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHN 441
G + ++E TGT I + + + + I + G +N A EV+ ++R
Sbjct: 292 GKEGRNLKKIEQDTGTKITISSLQDL--TVYNPERTITVKGAIENCGRAEEEVMKKIREA 349
Query: 442 LKS 444
+S
Sbjct: 350 YES 352
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPV 130
>gi|431890756|gb|ELK01635.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Pteropus
alecto]
Length = 577
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 177/435 (40%), Gaps = 60/435 (13%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
GK GRN+ ++ ++ KI + +++ D + T+ VK A+ C M
Sbjct: 293 GKEGRNLKKVEQDTETKITI------SSLQDLTLYNPERTITVKGAI--ENCCRAEQEIM 344
Query: 205 EKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPG 264
+K + + + S H P L+L G ++S + P
Sbjct: 345 KKVREAYENDVAAM----SLQSH--LIPGLNLA--AVGLFPASSSAVPPPPSSVAGAAPY 396
Query: 265 LDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTI 323
++ +++ IIGK+G ++ L + A I A P T S R+V I
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVII 456
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGS 383
+ + A ++ + E + F G + + I V A G + G
Sbjct: 457 TGPPEAQFK------AQGRIYGKLKE----ENF-FGPKEEVKLETHIRVPASAAGRVIGK 505
Query: 384 GSSAVSEMEDVTGTDIKLVGGEQVLGCAAQND-VVIQISGEY---KNVQNALSEVVGRLR 439
G V+E++++T ++ +V +Q +ND V+++I G + + Q + +++ +++
Sbjct: 506 GGKTVNELQNLTAAEV-VVPRDQ---TPDENDQVIVKIIGHFYASQMAQRKIRDILAQVK 561
Query: 440 HNLKSGEILNEARPR 454
+ G+ N+A+ R
Sbjct: 562 QLHQKGQ-SNQAQAR 575
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 202 PQTEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 250
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 251 EKPIT------------IHSTPEGCSAACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 298
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 299 GRLIGKEGRNLKKIEQDTDTKITISP 324
>gi|301116557|ref|XP_002906007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109307|gb|EEY67359.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 550
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 116/287 (40%), Gaps = 59/287 (20%)
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVML------PPPACAAIDDQL-IQITGAT-LAVKKAL 191
+G+++G G N RM ESGA+I++ P +++L + IT T AV KA
Sbjct: 68 MGLLIGPRGSNQKRMEDESGARILIRGKGSSKDPTGDPDENEELHVLITADTDEAVAKAQ 127
Query: 192 VAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEF 251
AV L FN P + + L V L G ++N SE
Sbjct: 128 SAVEEIL------------FN-PQQAMKLKQE---------QLRKVAELNGTLNENYSES 165
Query: 252 HSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF-- 309
HS + PG D ++ + G+ IIG+ G +R LQ SGA I
Sbjct: 166 HSIGQN--NYGPGNDAHSSSYDMKVPRELVGY----IIGRGGETIRDLQMKSGAHIQIVR 219
Query: 310 ---AAPLTKSGERVVTISA-LEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSS------- 358
AP T +R V I+ + L+ +QN L+ R + +G GF
Sbjct: 220 EEEGAPQT--ADRFVNIAGNQDTLELAQKLIQN---LIDERQ-QNQGAGGFRERDDRDRM 273
Query: 359 ----GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKL 401
G N + +V I+V + VG + G G + ++ TGT + +
Sbjct: 274 ARYGGINPDGSDSVEIMVPNERVGLIIGRGGCTIKAIQQRTGTSVTI 320
>gi|348530804|ref|XP_003452900.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 685
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 32 PTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSIDRRIMFCE 88
P +VG +IGR G I+ I++++ C++ GG P R + + G+ ++
Sbjct: 125 PDSMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLP---ERNVSLTGTQDSIQKAKRLL 181
Query: 89 NDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGG 148
N++V G R + +G + A ++ K G+V+GKGG
Sbjct: 182 NEIVSRG---------------RGTPPLSSYHDSSNGQNGAVHEMMIPAGKAGLVIGKGG 226
Query: 149 RNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+ +++ +G K++++ + D+ ++I G V++A V L
Sbjct: 227 ETIKQLQERAGVKMILIQDASQGPNVDKPLRIIGDPYKVQQAQEMVQEIL 276
>gi|403418461|emb|CCM05161.1| predicted protein [Fibroporia radiculosa]
Length = 326
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 125/313 (39%), Gaps = 60/313 (19%)
Query: 22 DDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID 81
+D ++ R + T G +IG++G ++ +R T + PG RV+ V GS
Sbjct: 25 NDTLTLRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGVSKVVPGVHERVLTVSGS---- 80
Query: 82 RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIG 141
VEG + + V + + + LL + +G
Sbjct: 81 -----------VEG----VAKAYALIVSQLVSANPSSPVSPNSPPPNTAIRLLISHNLMG 125
Query: 142 VVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
V+G+ G + ++ SGA++V MLP ++++++ G++ ++ +A+ + C
Sbjct: 126 SVIGRNGLKIKAIQDASGARMVASKDMLPQST-----ERIVEVQGSSESIGRAIEEIGRC 180
Query: 198 LQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSAD 257
L L E+ +F+ S D +G S NAS ++ A
Sbjct: 181 L--LEDWERGQGTV------LFHPGSGDER-------------SGRRSSNASRRYNGDAG 219
Query: 258 ADRDHPGLD------KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAA 311
R P + R Q +++ G IIG+ G + ++ SG+ IS A
Sbjct: 220 RGRTSPSPNAPLQQPTNLRTQNISIPSDMVGC----IIGRNGTKITEIRRLSGSKISIAK 275
Query: 312 -PLTKSGERVVTI 323
P ++GER+ TI
Sbjct: 276 EPHDETGERMFTI 288
>gi|449478185|ref|XP_002195336.2| PREDICTED: far upstream element-binding protein 3 [Taeniopygia
guttata]
Length = 558
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
V++ P +VG +IGR G IS I+ ++ C+I G R ++ G+
Sbjct: 114 VITEEFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGTPE---- 169
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + + ++ +R D DG+ +L +K+G+V
Sbjct: 170 -------------SIEQAKRLLGQIVDRCRNGPG-FHNDVDGNSTIQE-ILIPASKVGLV 214
Query: 144 VGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKA 190
+GKGG + +++ +G K++M+ P P A D+ ++ITG V++A
Sbjct: 215 IGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQA 261
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S RV V+G +
Sbjct: 292 SIEVSVPRYAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISTERVAQVMGLPDRCQHAA 351
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+++++ E I + V G ++ Y K G+V+G
Sbjct: 352 HIISELILTAQERDGFGNLAIARGRGRGRGDWSVGTPGGVQEITYT---VPADKCGLVIG 408
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 409 KGGENIKSINQQSGAHVELQRNPPP 433
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 25/170 (14%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRR 83
V++ P +VG +IGR G IS I+ ++ C+I G R ++ G+
Sbjct: 95 VITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGTPE---- 150
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
+ + + ++ +R D DG+ +L +K+G+V
Sbjct: 151 -------------SIEQAKRLLGQIVDRCRNGPG-FHNDVDGNSTIQE-ILIPASKVGLV 195
Query: 144 VGKGGRNVTRMRIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKA 190
+GKGG + +++ +G K++M+ P P A D+ ++ITG V++A
Sbjct: 196 IGKGGETIKQLQERTGVKMIMIQDGPMPTGA---DKPLRITGDAFKVQQA 242
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S RV V+G +
Sbjct: 273 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERVAQVMGLPDRCQHAA 332
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
+++++ E + + V G ++ Y K G+V+G
Sbjct: 333 HIISELILTAQERDGFGSLAVARGRGRGRGDWSVGTPGGMQEITYT---VPADKCGLVIG 389
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 390 KGGENIKSINQQSGAHVELQRNPPP 414
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPV 130
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 167/431 (38%), Gaps = 74/431 (17%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 417 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 465
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 466 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 513
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 514 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 565
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSL----------------------VPPLTGNP 244
F + V + P L+L P +P
Sbjct: 566 LREAFENDMLAV------NQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHP 619
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASG 304
S + SS + P ++ + + IIGK+GA ++ L +G
Sbjct: 620 FATHSGYFSSLYPPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAG 679
Query: 305 ALISFA-APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKG 363
A I A A ER+V I+ + A +F + E + F+ E
Sbjct: 680 ASIKIAPAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV- 729
Query: 364 DAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGE 423
+ I V + G + G G V+E++++T ++ +V +Q +V+++I G
Sbjct: 730 -KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGH 785
Query: 424 YKNVQNALSEV 434
+ Q A ++
Sbjct: 786 FFASQTAQRKI 796
>gi|393908932|gb|EFO19357.2| hypothetical protein LOAG_09137 [Loa loa]
Length = 265
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 97 EVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRI 156
++ +T E V+R E + EV + D D + +L + + G V+G+GG + +R
Sbjct: 24 QLVATVENVVRCVEMIIARIDEVHDNQDRD--SELKVLVHQSHAGAVIGRGGSRIKELRE 81
Query: 157 ESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIE 216
E+G + + C +++IQI G + LV + + L+ + K P +RP E
Sbjct: 82 ENGVDLKVY-SECCPQSTERIIQINGKPEKIVACLVTIISTLKEIPI--KGP---SRPYE 135
Query: 217 KVFY 220
+F+
Sbjct: 136 SIFF 139
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 85/221 (38%), Gaps = 35/221 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
R + G +IG+ GS I+ + + RI FPG+ R+I+V G+
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGA------ 91
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
++ Q AV + ++ E E D D + L+ G +
Sbjct: 92 --------------INEIQRAVELILSKLLS-ELHSEDDNDAEPKTKVRLVVPNGSCGGI 136
Query: 144 VGKGGRNVTRMRIESGAKIVMLPPP-ACAAIDDQLIQITGATLAVKKALVAVTTCLQ--- 199
+GKGG + +S A I + P +D+L+ +TG +A+ + + L
Sbjct: 137 IGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDP 196
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSD-PHREFFPHLSLVPP 239
H + SP + V++S P+ P S+ PP
Sbjct: 197 HYAQSMNSPFSY----PGVYFSGYQGVPYTYVLP--SVAPP 231
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK G ++ + SGA I+ + + ER+VT+ T
Sbjct: 19 LTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISD--SSCAERIVTV-------TGS 69
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ N A + + E + ++ V + ++V A G L G G S + E+ +
Sbjct: 70 TEAINNAFEMITKKFEEDVSNNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 129
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 130 NTGASVQVAG 139
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 123/332 (37%), Gaps = 49/332 (14%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P ++ RL+ VG +IG+ G I R + RI+ R++ V GS
Sbjct: 15 PAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVTVTGSTE- 71
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
+++ E + + FE +V + L+ ++
Sbjct: 72 ----------------AINNAFEMITKKFEE--DVSNNMANSSTPKPPVTLRLVVPASQC 113
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G ++GKGG + +R +GA + + D L Q T + + A+T C+
Sbjct: 114 GSLIGKGGSKIKEIRENTGASVQVA--------GDMLHQSTERAVTISGTPEAITKCVYQ 165
Query: 201 L-----------STMEKSPICFNRPIEKVFYS---NSSDPHREFFP--HLSL--VPPLTG 242
+ +T+ P N Y+ N + P+ +F HL++ P L G
Sbjct: 166 ICCVMLESPPKGATIPYRPKPTNATATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLPG 225
Query: 243 NPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNA 302
+ + A+ G Q+ M+ + +IG+ GA + ++
Sbjct: 226 QTPFTPTALNMGYGVANAASAGTQVATTGQQTYEIMIPNDLIGC-VIGRGGAKINEIRQI 284
Query: 303 SGALISFAAPLTKSGERVVTIS-ALEYLDTRH 333
SGA I A S +R VTIS +E ++ H
Sbjct: 285 SGATIKIANSQEGSNDRSVTISGTVEAINLAH 316
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 128/326 (39%), Gaps = 60/326 (18%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 148
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQNAS 303
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 149 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 195
Query: 304 GALI-------SFAAP---LTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ 353
++ +A P LTK + + + L + +P L S E +
Sbjct: 196 VVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG-QTNPAFPGEKLPLHSSEEAQNL 254
Query: 354 QGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
G SSG + + + + D +GC+ G + ++E+ ++G IK+ +
Sbjct: 255 MGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----G 309
Query: 413 QNDVVIQISGEYKNVQNALSEVVGRL 438
++ I I+G N+ A + RL
Sbjct: 310 SSERQITITGTPANISLAQYLINARL 335
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 345 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 404
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 405 YFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 464
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 465 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 513
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 570
Query: 430 ALSEV 434
A ++
Sbjct: 571 AQRKI 575
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 359 GENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
G++K + LV GC+ G G S +++ + +G I+L + ND +I
Sbjct: 34 GDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFF--PGTNDRII 91
Query: 419 QISGEYKNVQNALSEVVGRLRHNLKSGEILNEARPR 454
+SG + V A+ ++ +L L GE NEA R
Sbjct: 92 MVSGLFDEVMKAMELILEKL---LAEGEEFNEAEAR 124
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 121/312 (38%), Gaps = 47/312 (15%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRR 83
R + G +IG+ GS I+ + + RI FPG++ R+I+V G
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSG------- 95
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVAYCGLLANTTKIGV 142
+F E V++ E + E + AE E + + L+ + G
Sbjct: 96 -LFDE----------------VMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGG 138
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPP-ACAAIDDQLIQITGATLAVKKALVAVTTCLQHL 201
++GKGG + ES A I + P + D+L+ ITG + A+ L+ L
Sbjct: 139 IIGKGGATIKSFIEESHAGIKISPQDNNYVGLHDRLVTITG---TFDNQMNAIDLILKKL 195
Query: 202 STMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRD 261
S P + P Y+ + P P ++P + P NA + ++ R
Sbjct: 196 SEDVHYPPNLSSPFP---YAGLTFPSYPGVPVGYMIPQV---PYSNAVNYGPNNGYGGRY 249
Query: 262 H------PGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---AP 312
P + + +L + + ++G+ G + + ASGA I +
Sbjct: 250 QNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISDRGDY 309
Query: 313 LTKSGERVVTIS 324
++ + +R VTI+
Sbjct: 310 ISGTSDRKVTIT 321
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Query: 270 RKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAP---LTKSGERVVTISAL 326
+++ LR L S A IIGK G+ + Q+ SGA I + + +R++ +S L
Sbjct: 37 KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVSGL 96
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
V A L+ + + EG++ F+ E + V ++V G + G G +
Sbjct: 97 ------FDEVMKAMELILEKLL-AEGEE-FNEAEAR---PKVRLVVPNSSCGGIIGKGGA 145
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNL 442
+ + + IK+ Q +D ++ I+G + N NA+ ++ +L ++
Sbjct: 146 TIKSFIEESHAGIKI--SPQDNNYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDV 199
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 116
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 117 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 164 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 223
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 224 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 283
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 284 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 329
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|260797497|ref|XP_002593739.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
gi|229278967|gb|EEN49750.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
Length = 730
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSG-S 79
VV+ P +VG +IGR G I+ ++ ++ C++ GG P RV + G+ S
Sbjct: 110 VVTEEYRVPDKMVGLIIGRGGEQITRLQAESGCKVQMAQDSGGLP---ERVCTLTGTPPS 166
Query: 80 ID--RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
I+ +R++ D ++E G S E DG V + N
Sbjct: 167 IEHAKRLI----DQIIEKGRSSGATEQPGTTLP-------------DGSIVTEMMIPGN- 208
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKA 190
K+G+V+GKGG + ++ +G K+VM+ ++ ++ITG ++A
Sbjct: 209 -KVGLVIGKGGETIRSLQERAGVKMVMIQDGPYMNAPEKPLRITGDPQKTQRA 260
>gi|428173185|gb|EKX42089.1| hypothetical protein GUITHDRAFT_74219, partial [Guillardia theta
CCMP2712]
Length = 268
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 42/191 (21%)
Query: 37 GGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGSIDRRIMFCENDVVV 93
G LIGR G+ ISS+++ T RI G +PG+ +R++L+ G S
Sbjct: 10 GTLIGRGGNTISSLQQRTGARIRVSNGNEYYPGTQNRIVLLTGQLS-------------- 55
Query: 94 EGGEVSSTQEAVIRVFERMWEVEAEVEGDG----DGDDVAYCGLLANTT----KIGVVVG 145
+ E +R E+ + G GDD G++ G+++G
Sbjct: 56 ---NIMGALEGSLR------EIYGDFSGHSAPSPPGDDRDSNGIMLTLAVPEISCGLLIG 106
Query: 146 KGGRNVTRMRIESGAKIVMLPPPACA-AIDDQLIQITGATLAVKKALVAVTTCLQHLSTM 204
+GG N+ M ESG KI + I ++L+ + G V KA+ + L M
Sbjct: 107 RGGENIRVMVEESGCKIQLTNKDHLVPGITERLVLVVGQIDRVLKAVELI------LYKM 160
Query: 205 EKSPIC-FNRP 214
+ P C ++ P
Sbjct: 161 WEDPKCRYDNP 171
>gi|255580721|ref|XP_002531182.1| conserved hypothetical protein [Ricinus communis]
gi|223529223|gb|EEF31197.1| conserved hypothetical protein [Ricinus communis]
Length = 122
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P D V +RL+ P VG +IGR G +I + +T+ RI G P R++L+ G
Sbjct: 24 PRDNV-YRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEP 82
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERM 112
+ +S +AV+RVF+R+
Sbjct: 83 E--------------AALSPAMDAVLRVFKRV 100
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLT-KSGERVVTISALEYLDTR 332
V LR++ +IGK GA +R ++ ++GA + A L S ER VT+S + DT
Sbjct: 106 VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVP--DT- 162
Query: 333 HSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEME 392
++ R + ++ SS E LV D +GC+ G S +SE+
Sbjct: 163 --------IIQCVRQICLDPSSQSSSQE---------FLVPNDLIGCIIGRHGSKISEIR 205
Query: 393 DVTGTDIKL 401
++G IK+
Sbjct: 206 QMSGAHIKI 214
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 33/139 (23%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG-FPGSDHRVILVVGSGSIDRR 83
V+ RLV P G LIG++G+ I IR T ++ G P S R + V G +
Sbjct: 106 VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSG---VPDT 162
Query: 84 IMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVV 143
I+ C + ++ SS+QE L IG +
Sbjct: 163 IIQCVRQICLDPSSQSSSQE-----------------------------FLVPNDLIGCI 193
Query: 144 VGKGGRNVTRMRIESGAKI 162
+G+ G ++ +R SGA I
Sbjct: 194 IGRHGSKISEIRQMSGAHI 212
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 134/328 (40%), Gaps = 64/328 (19%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
++ R + + G +IG+ G ++ +R +T + G RV+ + G
Sbjct: 46 LTVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGG------- 98
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGD---GDGDDVAYCG-----LLAN 136
CE +S V R +EG G G V+ G LL +
Sbjct: 99 --CEG--------ISKAYAVVARAL---------LEGAPSMGMGGVVSNNGTHPIKLLIS 139
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
++G ++G+ G + ++ SG ++V MLP ++++++ G +++A+
Sbjct: 140 HNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQST-----ERVVEVQGTPEGIQRAVW 194
Query: 193 AVTTCL-----QHLSTMEKSPICFNRPIEKVFYSNSSDPH--REFFPHLSLVPPLTGNPS 245
+ CL + T+ +P+ +P +S + + S TGN +
Sbjct: 195 EICKCLIDDWQRGTGTVLYNPVVRTQPAGATQMGSSGAGYGTSNRGDYSSSRVTRTGNGA 254
Query: 246 D------NASEFHSSSADADRDHPGLDKKGRK---QEVALRMLFSGWTASGIIGKRGAIV 296
D + S S A+R P D+ G + Q +++ G IIG+ G+ +
Sbjct: 255 DFSNGGGRSYNRRSDSDAANRGPPTHDENGEEIQTQNISIPADMVGC----IIGRAGSKI 310
Query: 297 RSLQNASGALISFA-APLTKSGERVVTI 323
++ SGA IS A AP ++GER+ TI
Sbjct: 311 SEIRKTSGARISIAKAPHDETGERMFTI 338
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 345 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSG 404
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 405 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 464
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 465 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 513
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 570
Query: 430 ALSEV 434
A ++
Sbjct: 571 AQRKI 575
>gi|71997383|ref|NP_001023000.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
gi|373218578|emb|CCD61629.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
Length = 557
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 44/199 (22%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF-PGSDHRVILVVGSGSIDRRIMFC 87
++ P G +IG+ G +I + +T +I + P S+ R+ +++G
Sbjct: 244 VIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMG----------- 292
Query: 88 ENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVAYCGLL----------AN 136
T++ + R ER+ E V ++ +G D G +
Sbjct: 293 -------------TRDQIYRATERITEIVNRAIKNNGAPQDRGSAGTVLPGQSIFYMHVP 339
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
K G+V+GKGG N+ ++ E+GA + P D+++ +I G+ L + A
Sbjct: 340 AGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKGSQLQIHHA------ 393
Query: 197 CLQHLSTMEKSPICFNRPI 215
HL ++ I N P+
Sbjct: 394 --SHLVRIKVGEISPNTPV 410
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 133/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 116
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 117 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + + P+ +G + TI + L L + +P
Sbjct: 164 VVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 223
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 224 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 283
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 284 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 329
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 88/216 (40%), Gaps = 48/216 (22%)
Query: 272 QEVALRMLFSGWTASGIIGKRGAIVRSLQNASGA-LISFAAPLTKSGERVVTIS------ 324
+ V +R + +IGK+G+ ++ +Q ASGA L + A L S ERV++IS
Sbjct: 221 KSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTERVLSISGVADAV 280
Query: 325 --ALEYLDT---RHSPVQNAAVLVFARSV-------------EVEGQQGFSSGENKGDAV 366
A+ Y+ T H +NA L + + QQ F G +
Sbjct: 281 HIAVYYVGTILLEHQD-RNANNLAYRPTAGGPSTRPPAPANPYAAAQQPFGYGAHAPPFA 339
Query: 367 AV---------------------SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVG-G 404
I + D VGC+ G G S ++E+ ++ + IK++ G
Sbjct: 340 GAAAPAVGAGAGAPQLPPGSQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASQIKIMEPG 399
Query: 405 EQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRH 440
+ N+ ++ I+G N+Q A+S + RL
Sbjct: 400 AGIAAGGGGNERLVTITGPPPNIQMAVSLLYQRLEQ 435
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 46/186 (24%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS------- 77
+S R + T +IG+SG I+ IR + R++ PG+ R++ V G
Sbjct: 140 ISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLDAVSKA 199
Query: 78 -GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLAN 136
G I RRI ND + V ++ IR +
Sbjct: 200 FGLIVRRI----NDEPFDQPSVPGSKSVTIR-------------------------FIVP 230
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALV 192
+++G V+GK G + ++ SGA++ MLP ++++ I+G AV A+
Sbjct: 231 NSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLP-----GSTERVLSISGVADAVHIAVY 285
Query: 193 AVTTCL 198
V T L
Sbjct: 286 YVGTIL 291
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ NA FA ++ + SS N A V +S++V A G
Sbjct: 62 AG----------PTNAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVGG------EQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G ++G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 137 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQ 191
Query: 189 KALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNP---- 244
+A+ + CL + +N + S + F S G+P
Sbjct: 192 RAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSSGGNTSGGAGFNQGSGRSDYGGSPRVMR 251
Query: 245 SDNASEFHSSSA-------DAD---RDHPGLDKKGRK---QEVALRMLFSGWTASGIIGK 291
+ N ++F + S+ D+D R P D+ G + Q +++ G IIG+
Sbjct: 252 TGNGADFSNGSSRPYNRRSDSDAALRGPPTHDENGEEIQTQNISIPADMVGC----IIGR 307
Query: 292 RGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
G+ + ++ SGA IS A AP ++GER+ TI
Sbjct: 308 AGSKISEIRKTSGARISIAKAPHDETGERMFTI 340
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
+ ++ + GV++GKGG+NV +R E+G K + + D+++ ITG A+ +A
Sbjct: 52 IVSSKEAGVIIGKGGKNVADLRDETGVKAGV--SKVVQGVHDRVLTITGGCDAISRAYAI 109
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
V L +E +P + V SN + P + H
Sbjct: 110 VARAL-----LEGAPAMG---MGGVVQSNGTHPIKLLISH 141
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 142/380 (37%), Gaps = 92/380 (24%)
Query: 8 YGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGS 67
YG +S P P + R + T +IG+ GS ++ IR + R+ PG+
Sbjct: 48 YGEASTT-APAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGN 106
Query: 68 DHRVILVVGS--------GSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEV 119
R++ V G G I RRI ND + V ++ I+
Sbjct: 107 PERILNVSGPLDAVSKAFGLIVRRI----NDEPFDVPSVPGSRAVTIK------------ 150
Query: 120 EGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDD 175
+ +++G V+GKGG + ++ SGAK+ MLP +
Sbjct: 151 -------------FMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLP-----GSTE 192
Query: 176 QLIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLS 235
+++ + G A+ A + T L + E+ P N Y SS P R
Sbjct: 193 RVLSVAGVADAIHIATYYIGTIL--IEAQERMPSTSNS-----TYRPSSQPRR------- 238
Query: 236 LVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAI 295
P G S + + +P ++ + Q++ + G IIGK G+
Sbjct: 239 ---PTQGGGSSYVPGYSHHAPYGPPHNP--PQQLQTQQIYIPNDLVGC----IIGKGGSK 289
Query: 296 VRSLQNASGALISF-----------AAPLTKSGERVVTISALEYLDTRHSPVQNAAVLVF 344
+ +++ S + I AP GER+V I+ + + +Q A L++
Sbjct: 290 INEIRHMSASQIKIMEPGATGLGPNGAPGGSEGERLVVITG------QPANIQMAVQLLY 343
Query: 345 AR-----SVEVEGQQGFSSG 359
R ++ QQG SSG
Sbjct: 344 HRLEQEKQKQLRAQQGGSSG 363
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 114 PQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 162
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 163 EKPIT------------IHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 210
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 211 GRLIGKEGRNLKKIEQDTDTKITISP 236
>gi|115471839|ref|NP_001059518.1| Os07g0439100 [Oryza sativa Japonica Group]
gi|38175703|dbj|BAC84296.2| unknown protein [Oryza sativa Japonica Group]
gi|50508539|dbj|BAD30838.1| unknown protein [Oryza sativa Japonica Group]
gi|113611054|dbj|BAF21432.1| Os07g0439100 [Oryza sativa Japonica Group]
Length = 233
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 391 MEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNE 450
M + T T +K++ V CA+Q ++V+QI+GE NV++ALS V +LR++ S E
Sbjct: 1 MNNTTRTKMKILEETAVPACASQYELVLQITGEPMNVRDALSLVCEKLRNHCFSSEKTTY 60
Query: 451 ARPRSPSGRV 460
PS +
Sbjct: 61 GNGHVPSSAI 70
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 195 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 243
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 244 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 291
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 292 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 343
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 344 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSG 403
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 404 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 463
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 464 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 512
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 513 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 569
Query: 430 ALSEV 434
A ++
Sbjct: 570 AQRKI 574
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 80/195 (41%), Gaps = 16/195 (8%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGSGSI 80
+S ++ P VG LIG++G I ++ ++ +I P S R + ++GS
Sbjct: 175 TMSRKMEVPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLEN 234
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
+ DV+ E + + V R F V A + + K+
Sbjct: 235 INKAEKLIKDVIAEA-DAGGSPSLVARGFATAQAVGAAEQ----------VQIQVPNEKV 283
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATLAVKKALVAVTTCL 198
G+++GKGG + ++ SGA+I ++P P ++ +++TG ++ A + +
Sbjct: 284 GLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQSKERTVRVTGDKKQIEMAREMIKEVM 343
Query: 199 QHLSTMEKSPICFNR 213
P +N+
Sbjct: 344 NQPVRSSTYPGSYNQ 358
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 288 IIGKRGAIVRSLQNASGALISF-----AAPLTKSGERVVTISALEYLDTRHSPVQNAAVL 342
+IGK G +R LQ SGA I A P + S V I +LE ++ +++
Sbjct: 190 LIGKAGDTIRFLQYNSGAKIQITRDADADPYSAS-RPVELIGSLENINKAEKLIKDVIAE 248
Query: 343 VFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLV 402
A +GF++ + G A V I V + VG + G G + ++ +G I+L+
Sbjct: 249 ADAGGSPSLVARGFATAQAVGAAEQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLI 308
Query: 403 GGEQVLGCAAQN-DVVIQISGEYKNVQNA---LSEVVGR-LRHNLKSGEILNEA-RPRSP 456
Q L Q+ + ++++G+ K ++ A + EV+ + +R + G + RPR P
Sbjct: 309 --PQHLPEGDQSKERTVRVTGDKKQIEMAREMIKEVMNQPVRSSTYPGSYNQQGYRPRGP 366
Query: 457 SG 458
+G
Sbjct: 367 TG 368
>gi|324512087|gb|ADY45016.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 515
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDR 82
DV+ + P VG +IGR G IS I+ + CR+ P SD G+ R
Sbjct: 30 DVLIETIEVPDHCVGLVIGRGGEQISQIQSQSNCRVQMS---PESD---------GNNMR 77
Query: 83 RIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEG--DGDGDDVAYCGLLANTTKI 140
+ + VE + S Q+ + R R +G G G + + +L K
Sbjct: 78 QCTLQGTKMAVERAK-SMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHE-MLIPGAKC 135
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G+V+GKGG + ++ ++G K+VM+ + + ++I G V A V LQ
Sbjct: 136 GLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRIIGEPDKVDTARRMVEDILQ 194
>gi|449492580|ref|XP_002192437.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Taeniopygia guttata]
Length = 584
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 193 PQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 241
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 242 EKPIT------------IHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 289
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 290 GRLIGKEGRNLKKIEQDTDTKITISP 315
>gi|449270977|gb|EMC81613.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Columba livia]
Length = 584
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 193 PQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 241
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 242 EKPIT------------IHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 289
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 290 GRLIGKEGRNLKKIEQDTDTKITISP 315
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|57530702|ref|NP_001006359.1| insulin-like growth factor 2 mRNA-binding protein 3 [Gallus gallus]
gi|82082638|sp|Q5ZLP8.1|IF2B3_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=VICKZ
family member 3
gi|53128909|emb|CAG31345.1| hypothetical protein RCJMB04_5e15 [Gallus gallus]
Length = 584
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 21 PDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSI 80
P V R++ PT VG +IG+ G+ I +I + T+ +I HR +G+
Sbjct: 193 PQSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDI--------HR---KENAGAA 241
Query: 81 DRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
++ I + ST E + + E+ + D + +LA+ +
Sbjct: 242 EKPIT------------IHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFV 289
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLP 166
G ++GK GRN+ ++ ++ KI + P
Sbjct: 290 GRLIGKEGRNLKKIEQDTDTKITISP 315
>gi|308482538|ref|XP_003103472.1| hypothetical protein CRE_28669 [Caenorhabditis remanei]
gi|308259893|gb|EFP03846.1| hypothetical protein CRE_28669 [Caenorhabditis remanei]
Length = 373
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGG---FPGSDHRVILVVGSGS 79
D +S +++ P+ V +IGRSG + ++R+ C+I +PG+ R+ V G
Sbjct: 28 DHLSIKILIPSSAVCDIIGRSGETMRNLRKKNSCQIQISKDGDTYPGTTERICFVKG--- 84
Query: 80 IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEA-EVEGDGDGDDVAYCGLLANTT 138
R+ N +V + S QE + + +A ++E GD++ ++ T
Sbjct: 85 ---RL----NHIV---AVIESIQEKIRKKCPNQTGNDAFDLENTLRGDEIK---IVMPNT 131
Query: 139 KIGVVVGKGGRNVTRMRIESGAKIVMLP 166
G+V+GK N+ ++ G+K+ + P
Sbjct: 132 SAGMVIGKSSNNLKLIKKRFGSKVEIYP 159
>gi|295669238|ref|XP_002795167.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285101|gb|EEH40667.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 280
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 26/161 (16%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---------APLTKSGERVVTI 323
E A+R++ T IIG+ G +R LQ SG ++ P+ G T
Sbjct: 9 EDAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNESKSVNGLRPVNLIGSPEATE 68
Query: 324 SALEYL------DTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFV 377
A ++ DTR L + E G S+G G+ V +I + D V
Sbjct: 69 RAKNFILEIVESDTRQ--------LANPQQREQRPPYGDSTGGPGGEKVNDTIYIPPDAV 120
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
G + G G + EM+ +TG I + + +G A+ +V +
Sbjct: 121 GMIIGKGGDTIKEMQAITGCRINI---QSPVGRDAEREVTL 158
>gi|190347114|gb|EDK39328.2| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 120/306 (39%), Gaps = 59/306 (19%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID-- 81
++++R++ G LIG++G +I SIR++T + PGS R++ V SG++D
Sbjct: 59 LINYRVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQPGSHERILTV--SGTLDDA 116
Query: 82 -RRIMFCENDVVVEGGEVSSTQEAV-IRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
R + + + E ST ++ VE E LL +
Sbjct: 117 ARALSYFAQALCNANTETFSTYSYFPLKQLSSTPCVEGE---------TTILRLLIPNAQ 167
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPA-CAAIDDQLIQITGATLAVKKALVAVTTCL 198
+G ++G G + +I++ I M+ + +++L+++ G + L ++ CL
Sbjct: 168 MGTLIGSKGVRI--QQIQANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRVISRCL 225
Query: 199 QHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADA 258
+E F+ + +Y P GN +
Sbjct: 226 -----IED----FSSIVTTSYY-----------------IPRGGNTT------------- 246
Query: 259 DRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGE 318
+ G D++ ++ + F +IGK G+ ++ ++ SGA I + + E
Sbjct: 247 --KYRGTDRRSSSPGISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGISEEVDGKTE 304
Query: 319 RVVTIS 324
R TIS
Sbjct: 305 REFTIS 310
>gi|71997385|ref|NP_001023001.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
gi|373218579|emb|CCD61630.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
Length = 510
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 44/199 (22%)
Query: 29 LVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGF-PGSDHRVILVVGSGSIDRRIMFC 87
++ P G +IG+ G +I + +T +I + P S+ R+ +++G
Sbjct: 197 VIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMG----------- 245
Query: 88 ENDVVVEGGEVSSTQEAVIRVFERMWE-VEAEVEGDGDGDDVAYCGLL----------AN 136
T++ + R ER+ E V ++ +G D G +
Sbjct: 246 -------------TRDQIYRATERITEIVNRAIKNNGAPQDRGSAGTVLPGQSIFYMHVP 292
Query: 137 TTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTT 196
K G+V+GKGG N+ ++ E+GA + P D+++ +I G+ L + A
Sbjct: 293 AGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKGSQLQIHHA------ 346
Query: 197 CLQHLSTMEKSPICFNRPI 215
HL ++ I N P+
Sbjct: 347 --SHLVRIKVGEISPNTPV 363
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ NA FA ++ + SS N A V + ++V A G
Sbjct: 62 TG----------PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
L G G + E+ + TG +++ G + I I+G ++V + ++
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAGDM----LPNSTERAITIAGVPQSVTECVKQIC---- 163
Query: 440 HNLKSGEILNEARPRSPSGRV 460
++ E +SP GRV
Sbjct: 164 ------LVMLETLSQSPQGRV 178
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 345 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSG 404
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 405 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 464
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 465 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 513
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 570
Query: 430 ALSEV 434
A ++
Sbjct: 571 AQRKI 575
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 132/349 (37%), Gaps = 91/349 (26%)
Query: 39 LIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS--------GSIDRRIMFCEND 90
+IG+ GS ++ IR + R+ PG+ R++ V G G I RRI ND
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDAVSKAFGLIVRRI----ND 133
Query: 91 VVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRN 150
+ V ++ I+ + +++G V+GKGG
Sbjct: 134 EPFDVPSVPGSRAVTIK-------------------------FMIPNSRMGSVIGKGGSK 168
Query: 151 VTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
+ ++ SGAK+ MLP ++++ + G A+ A + T L + E+
Sbjct: 169 IKEIQDASGAKLNASEGMLP-----GSTERVLSVAGVADAIHIATYYIGTIL--IEAQER 221
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLD 266
P N Y SS P R P G S + + +P
Sbjct: 222 MPSTSNS-----TYRPSSQPRR----------PTQGGGSSYVPGYSHHAPYGPPHNP--P 264
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISF-----------AAPLTK 315
++ + Q++ + G IIGK G+ + +++ S + I AP
Sbjct: 265 QQLQTQQIYIPNDLVGC----IIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGS 320
Query: 316 SGERVVTISALEYLDTRHSPVQNAAVLVFAR-----SVEVEGQQGFSSG 359
GER+V I+ + + +Q A L++ R ++ QQG SSG
Sbjct: 321 EGERLVVITG------QPANIQMAVQLLYHRLEQEKQKQLRAQQGGSSG 363
>gi|313246366|emb|CBY35281.1| unnamed protein product [Oikopleura dioica]
Length = 641
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 72/175 (41%), Gaps = 24/175 (13%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFC 87
+ P +VG +IG++G I+ I+++T CR+ G R + G+
Sbjct: 48 NISVPDQLVGLIIGKNGEQINRIQQETGCRVQIVPNSTGGSERPCTLTGTFHQVHHAKQK 107
Query: 88 ENDVVVEGGE--------VSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTK 139
N+++ GG + Q +F + E ++ D K
Sbjct: 108 LNEIITRGGPRENGMSYGENKHQGQFNIIFLNQMQHEMQIPPD----------------K 151
Query: 140 IGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAV 194
G+++GKGG + ++ E K+ ++ A D++ ++I G AV+ A A+
Sbjct: 152 CGLIIGKGGNTLKQLMQEFNVKLHLVQESAEITRDEKPLKIIGTPQAVESAKNAI 206
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR G IS I+ +T RI + P D R + G+
Sbjct: 231 SIEVSVPKAAVGVVIGRGGENISKIQNETNTRIQFKTDDPTQDVRSCSISGTPEA----- 285
Query: 86 FCE--NDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVA--YC-GLLANTTKI 140
C+ ND + E + R +++ E + G+ D + +C ++
Sbjct: 286 -CQVANDRISE----------IAR--QKLQEQHPPLHGNNDSSFMQGQHCVEYPVPASRA 332
Query: 141 GVVVGKGGRNVTRMRIESGA 160
GVV+GKGG N+ ++ SGA
Sbjct: 333 GVVIGKGGENIRLIKENSGA 352
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
V +R+LF G +IG++G+ + ++ SG + K ER+V++S TR
Sbjct: 23 VTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKG-NEKDIERIVSVSGSPAGVTR- 80
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
A+ VE + G +G V + ++V G + G G + E+ +
Sbjct: 81 ------AIGKVGEFVEADLNDGL-TGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEIRE 133
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
TG ++K+ ++L A + +I + GE + +Q + +
Sbjct: 134 KTGCNVKIA--NELL--PASTEKLITLYGEPRVIQQCVGSI 170
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 64/218 (29%)
Query: 1 MMHHSNPYGYSSKRRGPLNLPDDV--VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRI 58
M + SNPY S + L DD V+ RL+ VG LIGR GS I IR ++ C +
Sbjct: 1 MENPSNPYDNSQQDE----LGDDTICVTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEV 56
Query: 59 HCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWE-VEA 117
+G I+R + VS + V R ++ E VEA
Sbjct: 57 KIKGN-------------EKDIERIV------------SVSGSPAGVTRAIGKVGEFVEA 91
Query: 118 EVEGDGDGDDVAYCGLLANTTKI-------------GVVVGKGGRNVTRMRIESGAKIV- 163
++ GL TTKI G ++GKGG + +R ++G +
Sbjct: 92 DLND----------GLTGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKI 141
Query: 164 ---MLPPPACAAIDDQLIQITGATLAVKKALVAVTTCL 198
+LP A ++LI + G +++ + ++ +
Sbjct: 142 ANELLP-----ASTEKLITLYGEPRVIQQCVGSICQVM 174
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ NA FA ++ + SS N A V + ++V A G
Sbjct: 62 AG----------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAG 135
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG 403
TG +++ G
Sbjct: 126 STGAQVQVAG 135
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 131/351 (37%), Gaps = 84/351 (23%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 116
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQN-- 301
E S+ G + +VA ML S A I G AI + ++
Sbjct: 117 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIFQCVKQIC 163
Query: 302 -------ASGALISF-----AAPLTKSGERVVTI------------SALEYLDTRHSPV- 336
GA I + P+ +G + TI + L L + +P
Sbjct: 164 VVMLESPPKGATIPYRPKPACTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFP 223
Query: 337 ----QNAAV----LVFARSVEVEGQQGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSA 387
N A L S E + G SSG + + + + D +GC+ G +
Sbjct: 224 PLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTK 283
Query: 388 VSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRL 438
++E+ ++G IK+ + ++ I I+G N+ A + RL
Sbjct: 284 INEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 329
>gi|354502188|ref|XP_003513169.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Cricetulus griseus]
Length = 481
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 35 VVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMFCENDVVVE 94
+VG +IGR G IS I+ ++ C+I G R ++ G+
Sbjct: 1 MVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE--------------- 45
Query: 95 GGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVTRM 154
+ + + ++ +R D DG+ LL +K+G+V+GKGG + ++
Sbjct: 46 --SIEQAKRLLGQIVDRCRNGPG-FHNDIDGNSTIQ-ELLIPASKVGLVIGKGGETIKQL 101
Query: 155 RIESGAKIVML---PPPACAAIDDQLIQITGATLAVKKA 190
+ +G K+VM+ P P A D+ ++ITG V++A
Sbjct: 102 QERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQA 137
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Query: 26 SFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIM 85
S + P VG +IGR+G +I I+ D RI + S R V+G +
Sbjct: 168 SIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAA 227
Query: 86 FCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVG 145
N++++ E + + V G ++ Y K G+V+G
Sbjct: 228 HIINELILTAQERDGLGGLAVARGRGRGRGDWSVGTPGGVQEITYT---VPADKCGLVIG 284
Query: 146 KGGRNVTRMRIESGAKIVML--PPP 168
KGG N+ + +SGA + + PPP
Sbjct: 285 KGGENIKSINQQSGAHVELQRNPPP 309
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 125/334 (37%), Gaps = 63/334 (18%)
Query: 11 SSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHR 70
+++ + P P ++ RL+ VG +IG+ G I R ++ RI+ G S R
Sbjct: 6 TTENKVPGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDG--SSPER 63
Query: 71 VILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERM-WEVEAEVEGDGDGDDV- 128
++ + GS E +++ F + + E +++ V
Sbjct: 64 IVTITGS------------------------TENILKAFNMIGKKFEEDMKAAHVNSSVP 99
Query: 129 ---AYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATL 185
L+ ++ G ++GKGG + +R +GA I + D L T +
Sbjct: 100 VPPVTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA--------GDMLPNSTERAV 151
Query: 186 AVKKALVAVTTCLQHLS--TMEKSPICFNRPIEKVFYSNSSDP-------------HREF 230
V A++ C+ H+ +E P P + S +S H+
Sbjct: 152 TVSGTPDAISQCVYHICCVMLESPPKGATIPYKPRPASGTSTSGPVVFAGGQLTKLHQLA 211
Query: 231 FPHLSLVPPLTGNPSDNASEFHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIG 290
+ P T P+ A++F +A PG + + E+ + G IIG
Sbjct: 212 LQQTPYITPGTTLPAALATQFGVQTAS----QPG-NPSSQTHELTIPNELIGC----IIG 262
Query: 291 KRGAIVRSLQNASGALISFAAPLTKSGERVVTIS 324
K G + ++ SGA I A S +R VTI+
Sbjct: 263 KGGCKINEIRQCSGATIKIAGMQEGSTDRQVTIT 296
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G ++ + SGA I+ + S ER+VTI+ +
Sbjct: 20 LTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISD--GSSPERIVTITGSTENILK- 76
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
A + + E + + + V + ++V A G L G G S + E+ +
Sbjct: 77 ------AFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIKEIRE 130
Query: 394 VTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGEILNEARP 453
VTG I++ G +L + + V +SG + + + + + G + +P
Sbjct: 131 VTGASIQVAG--DMLPNSTERAVT--VSGTPDAISQCVYHICCVMLESPPKGATI-PYKP 185
Query: 454 RSPSG-RVGGPA------LHKLHQ 470
R SG GP L KLHQ
Sbjct: 186 RPASGTSTSGPVVFAGGQLTKLHQ 209
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 345 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG 404
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 405 YFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 464
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 465 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 513
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 570
Query: 430 ALSEV 434
A ++
Sbjct: 571 AQRKI 575
>gi|444517721|gb|ELV11739.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Tupaia
chinensis]
Length = 552
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVM 164
GK GRN+ ++ ++ KI +
Sbjct: 293 GKEGRNLKKVEQDTETKITI 312
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIISSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +S+M SP P+
Sbjct: 74 MIAYKFEEDIISSMSNSPATSKPPV 98
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 244
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 245 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 292
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 293 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 344
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++ P G +P S
Sbjct: 345 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSG 404
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 405 YFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 464
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 465 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 513
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 514 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 570
Query: 430 ALSEV 434
A ++
Sbjct: 571 AQRKI 575
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 28/191 (14%)
Query: 267 KKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISAL 326
++G +V LR L + A IIGK G+ ++ L+ A S P + S ERV+TI A
Sbjct: 71 RRGDGPKVELRFLLASKNAGAIIGKGGSNIKRLRQDYKA--SVTVPDSTSPERVLTIGA- 127
Query: 327 EYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
+ A V ++E + + +N + +LV GC+ G
Sbjct: 128 --------NLGTALECVLDIIPKLEDYKNY---KNNDFDCEMRLLVHQSQAGCIIGRAGF 176
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
+ E+ + TG IK+ C + V+ I G+ K V + + + H+L
Sbjct: 177 KIKELRERTGAQIKVYS----QCCPESTERVVAIGGKPKIVVDCIETI-----HDL---- 223
Query: 447 ILNEARPRSPS 457
L A P+ P+
Sbjct: 224 -LQTAPPKGPN 233
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGS 77
NLP S ++ P + G +IG+ G+ I IRR + +I + G PGS+ R+I + G+
Sbjct: 469 NLP----STQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITITGT 523
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 98
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 158 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 189
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 50 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 105
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 106 MIAYKFEEDIINSMSNSPATSKPPV 130
>gi|344245659|gb|EGW01763.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Cricetulus
griseus]
Length = 552
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 25 VSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRI 84
+ RL+ PT VG +IG+ G+ I +I + T+ +I HR +G+ ++ I
Sbjct: 196 IPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV--------HR---KENAGAAEKAI 244
Query: 85 MFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVV 144
V ST E + + E+ + D D +LA+ +G ++
Sbjct: 245 ------------SVHSTPEGCSSACKMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLI 292
Query: 145 GKGGRNVTRMRIESGAKIVM 164
GK GRN+ ++ ++ KI +
Sbjct: 293 GKEGRNLKKVEQDTETKITI 312
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 128/326 (39%), Gaps = 60/326 (18%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP------LTGNP 244
+ + +++M SP P+ L LV P L G
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPVT-----------------LRLVVPASQCGSLIGKG 116
Query: 245 SDNASEFHSSSADADRDHPGLDKKGRKQEVALRML-FSGWTASGIIGKRGAIVRSLQNAS 303
E S+ G + +VA ML S A I G AI++ ++
Sbjct: 117 GSKIKEIREST-------------GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQIC 163
Query: 304 GALI-------SFAAP---LTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQ 353
++ +A P LTK + + + L + +P L S E +
Sbjct: 164 VVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG-QTNPAFPGEKLPLHSSEEAQNL 222
Query: 354 QGFSSGENKGDAVAV-SILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAA 412
G SSG + + + + D +GC+ G + ++E+ ++G IK+ +
Sbjct: 223 MGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----G 277
Query: 413 QNDVVIQISGEYKNVQNALSEVVGRL 438
++ I I+G N+ A + RL
Sbjct: 278 SSERQITITGTPANISLAQYLINARL 303
>gi|9665104|gb|AAF97295.1|AC010164_17 Hypothetical protein [Arabidopsis thaliana]
Length = 389
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 28 RLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCE---GGFPGSDHRVILVVGSGSIDRRI 84
R+ P+ VG LIG+ G ++ ++ ++ +I P S R + ++G+ S +
Sbjct: 213 RIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKA 272
Query: 85 MFCENDVV--VEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGV 142
N V+ VE G V + A V E+M E +V D K+GV
Sbjct: 273 EKLINAVIAEVEAGGVPAL--AARGVPEQM---EIKVPSD----------------KVGV 311
Query: 143 VVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITG-------ATLAVKKALVAVT 195
++G+GG + M+ +S A+I ++P A ++ ++I+G AT +K + V
Sbjct: 312 IIGRGGETIKNMQTKSRARIQLIPQNEGDASKERTVRISGDKRQIDIATALIKDVMYQVC 371
Query: 196 TCLQHLSTM 204
+ L TM
Sbjct: 372 LLMFFLKTM 380
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 167/412 (40%), Gaps = 59/412 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 197 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 245
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 246 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 293
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + + M+K
Sbjct: 294 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACASA--EIEIMKK 345
Query: 207 SPICFNRPIEKVFYSNSSDPHREFFPHLSLVPP---LTGNPSDNASEFHSSSADADRDHP 263
F + V + P L+L TG + + A HP
Sbjct: 346 LREAFENDMLAV------NQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHP 399
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA-APLTKSGERVVT 322
+QE+ + + IIGK+GA ++ L +GA I A A ER+V
Sbjct: 400 FAYP---EQEI-VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVI 455
Query: 323 ISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTG 382
I+ + A +F + E + F+ E + I V + G + G
Sbjct: 456 ITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAHIRVPSSTAGRVIG 504
Query: 383 SGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEV 434
G V+E++++T ++ +V +Q +V+++I G + Q A ++
Sbjct: 505 KGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQTAQRKI 553
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R++ G IIGK+G IV+ + SGA I+ + ER+VT++
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD--GSCPERIVTVTGPT------ 69
Query: 334 SPVQNAAVLVFARSVE-------VEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
+ + A L+ + E ++G G + + ++V A G L G G S
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGS 129
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLRHNLKSGE 446
+ E+ +VTG I++ ++L + + V ISG + + + + + + G
Sbjct: 130 KIKEIREVTGASIQV--ASEMLPNSTERAVT--ISGTSEAITQCIYHICCVMLESPPKGA 185
Query: 447 ILNEARPRSPSGRVGGPAL 465
+ P P +VGGP +
Sbjct: 186 TI----PYRPKPQVGGPVI 200
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S+ +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSTATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 13 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITL 70
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ NA FA ++ + SS N A V + ++V A G
Sbjct: 71 TG----------PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 120
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVG 403
L G G + E+ + TG +++ G
Sbjct: 121 LIGKGGCKIKEIRESTGAQVQVAG 144
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 170/425 (40%), Gaps = 62/425 (14%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSIDRRIMF 86
R++ PT VG +IG+ G I +I + T+ R+ HR SG+ ++ +
Sbjct: 194 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDI--------HRK---ENSGAAEKPVTI 242
Query: 87 CENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGK 146
EG T EA + E M + E + +++ +LA+ +G ++GK
Sbjct: 243 ---HATPEG-----TSEACRMILEIM---QKEADETKLAEEIP-LKILAHNGLVGRLIGK 290
Query: 147 GGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQHLSTMEK 206
GRN+ ++ E+G KI + +++ D I T+ VK + A + M+K
Sbjct: 291 EGRNLKKIEHETGTKITI------SSLQDLSIYNPERTITVKGTVEACANA--EIEIMKK 342
Query: 207 SPICFNRPIEKVFYSNSSDPHRE------FFPHLSLVPPLTG----------NPSDNASE 250
F + V + P F LS++PP G +P S
Sbjct: 343 LREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG 402
Query: 251 FHSSSADADRDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA 310
+ SS + P ++ + + IIGK+GA ++ L +GA I A
Sbjct: 403 YFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIA 462
Query: 311 -APLTKSGERVVTISALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVS 369
A ER+V I+ + A +F + E + F+ E +
Sbjct: 463 PAEGPDVSERMVIITGPPEAQFK------AQGRIFGKLKE---ENFFNPKEEV--KLEAH 511
Query: 370 ILVGADFVGCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQN 429
I V + G + G G V+E++++T ++ +V +Q +V+++I G + Q
Sbjct: 512 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQT--PDENEEVIVRIIGHFFASQT 568
Query: 430 ALSEV 434
A ++
Sbjct: 569 AQRKI 573
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 27 FRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC-EGGFPGSDHRVILVVGSGSIDRRIM 85
RL+ + GG+IG G+ I +R +T+ I + P S RV+L+ G R++
Sbjct: 151 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPD---RVV 207
Query: 86 FCEN---DVVVEGGEVSSTQEAVIRVFERMWEV--EAEVEGDGDGDDVAYCGLLANTTKI 140
C D++ E Q ++ ++ + D G V + +
Sbjct: 208 ECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFP-MRGREDLA 266
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTCLQH 200
G ++GKGG+ + ++R ESGA I + P +D++I ITG ++ A + ++
Sbjct: 267 GSIIGKGGQRIKQIRHESGASIKIDEP--LEGSEDRIITITGTQDQIQNAQYLLQNSVKQ 324
Query: 201 LS 202
S
Sbjct: 325 YS 326
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 36 VGGLIGRSGSIISSIRRDTKCRIHCE---GGFPGSDHRVILVVGSGSIDRRIMFCENDVV 92
VG +IG+SG I +++ + +I PGS R + + G+ R N+V+
Sbjct: 113 VGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQLINEVL 172
Query: 93 VEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKIGVVVGKGGRNVT 152
E SS + R + G D + N K+G+V+GKGG +
Sbjct: 173 AEADAASSG-----NLSSRKYNAPQP------GADQFQMKIANN--KVGLVIGKGGETIK 219
Query: 153 RMRIESGAKIVMLP---PPACAAID 174
M+ +SGA+I ++P PP A +
Sbjct: 220 SMQAKSGARIQVVPLHLPPGDPATE 244
>gi|357481253|ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
gi|355512247|gb|AES93870.1| Far upstream element-binding protein [Medicago truncatula]
Length = 807
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 40/196 (20%)
Query: 23 DVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHC---EGGFPGSDHRVILVVGS-G 78
D + ++ P+ VG LIG+SG I ++ ++ +I P S R + ++G+
Sbjct: 183 DTTTRKIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADPHSSTRPVELIGTLE 242
Query: 79 SIDR--RIMFCENDVVVE---GGEVS------STQEAVIRVFERMWEVEAEVEGDGDGDD 127
SID+ ++M N V+ E GG + S +A++ + +V E
Sbjct: 243 SIDKAEKLM---NAVIAEADAGGSPALVARGLSPAQAIVGSDQIQIQVPNE--------- 290
Query: 128 VAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPP--PACAAIDDQLIQITGATL 185
K+G+++GKGG + ++ ++GA+I ++P P ++ +Q+TG
Sbjct: 291 -----------KVGLIIGKGGETIKSLQTKTGARIQLIPQHLPEGDDSKERTVQVTGDKR 339
Query: 186 AVKKALVAVTTCLQHL 201
++ A + L +
Sbjct: 340 QIEIAQEMIKEVLSQI 355
>gi|225682613|gb|EEH20897.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226290030|gb|EEH45514.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 308
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 26/161 (16%)
Query: 273 EVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFA---------APLTKSGERVVTI 323
E A+R++ T IIG+ G +R LQ SG ++ P+ G T
Sbjct: 37 EDAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNESKSINGLRPVNLIGSPEATE 96
Query: 324 SALEYL------DTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFV 377
A ++ DTR L + E G S+G G+ V +I + D V
Sbjct: 97 RAKNFILEIVESDTRQ--------LANPQQREQRPPYGDSTGGPGGEKVNDTIYIPPDAV 148
Query: 378 GCLTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVI 418
G + G G + EM+ +TG I + + +G A+ +V +
Sbjct: 149 GMIIGKGGDTIKEMQAITGCRINI---QSPVGRDAEREVTL 186
>gi|146416151|ref|XP_001484045.1| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 61/305 (20%), Positives = 121/305 (39%), Gaps = 57/305 (18%)
Query: 24 VVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSGSID-- 81
++++R++ G LIG++G +I SIR++T + PGS R++ V SG++D
Sbjct: 59 LINYRVLVSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQPGSHERILTV--SGTLDDA 116
Query: 82 -RRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANTTKI 140
R + + + E ST + + VEG + LL ++
Sbjct: 117 ARALSYFAQALCNANTETFSTYSYFPL---KQLSLTPCVEG-----ETTILRLLIPNAQM 168
Query: 141 GVVVGKGGRNVTRMRIESGAKIVMLPPPA-CAAIDDQLIQITGATLAVKKALVAVTTCLQ 199
G ++G G + +I++ I M+ + +++L+++ G + L ++ CL
Sbjct: 169 GTLIGSKGVRI--QQIQANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRVISRCL- 225
Query: 200 HLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSLVPPLTGNPSDNASEFHSSSADAD 259
+E F+ + +Y P GN +
Sbjct: 226 ----IED----FSSIVTTSYY-----------------IPRGGNTT-------------- 246
Query: 260 RDHPGLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGER 319
+ G D++ ++ + F +IGK G+ ++ ++ SGA I + + ER
Sbjct: 247 -KYRGTDRRSSLPGISTTLYFPNEIVGALIGKNGSRIQGVRKVSGASIGISEEVDGKTER 305
Query: 320 VVTIS 324
TIS
Sbjct: 306 EFTIS 310
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 268 KGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALE 327
+G + L+M+ G IIGK G+ ++ + S A I+ + T ER+V+++
Sbjct: 21 RGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTP--ERIVSVTG-- 76
Query: 328 YLDTRHSPVQNAAVLVFAR-SVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSS 386
++A V FA ++E + +S N V + ++V G + G G +
Sbjct: 77 --------TKDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGA 128
Query: 387 AVSEMEDVTGTDIKLVGGEQVLGCA 411
+ E+ +V+G + +V GE + G +
Sbjct: 129 KIKEIREVSGASV-VVAGEFLPGSS 152
>gi|294932845|ref|XP_002780470.1| hypothetical protein Pmar_PMAR001062 [Perkinsus marinus ATCC 50983]
gi|239890404|gb|EER12265.1| hypothetical protein Pmar_PMAR001062 [Perkinsus marinus ATCC 50983]
Length = 497
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 19 NLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPGSDHRVILVVGSG 78
++P++ V + CP V+G +IG G+ I+ ++ T C+I C+ G PG +V + +
Sbjct: 147 SIPEEFVR-EVKCPQSVIGRVIGPRGATINQLQTTTLCKIQCQPGQPGGFAKVKISGPTQ 205
Query: 79 S-IDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMWEVEAEVEGDGDGDDVAYCGLLANT 137
+ +D +++ + V G T E ++ + E+ E+ L
Sbjct: 206 TCVDGAVIYVQAMV---GNWDDYTDEQLMEAGGK--EIRKEI--------------LIPH 246
Query: 138 TKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVAVTTC 197
+G V+G G + + ++GAK+ + + + +D+ + I+G AV+KA V +
Sbjct: 247 IHVGNVIGPKGSVIKTIEADTGAKLEVDNRTSRGSKEDRHMTISGPEKAVEKAAQYVMSV 306
Query: 198 L 198
+
Sbjct: 307 M 307
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 30/201 (14%)
Query: 264 GLDKKGRKQEVALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTI 323
G+ + G + +R+L G IIGK+G V+ ++ SGA I+ + ER++T+
Sbjct: 4 GVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISE--GNCPERIITL 61
Query: 324 SALEYLDTRHSPVQNAAVLVFARSVEVEGQQGFSSGENKGDA----VAVSILVGADFVGC 379
+ NA FA ++ + SS N A V + ++V A G
Sbjct: 62 TG----------PTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 111
Query: 380 LTGSGSSAVSEMEDVTGTDIKLVGGEQVLGCAAQNDVVIQISGEYKNVQNALSEVVGRLR 439
L G G + E+ + TG +++ G + I I+G ++V + ++
Sbjct: 112 LIGKGGCKIKEIRESTGAQVQVAGDM----LPNSTERAITIAGVPQSVTECVKQIC---- 163
Query: 440 HNLKSGEILNEARPRSPSGRV 460
++ E +SP GRV
Sbjct: 164 ------LVMLETLSQSPQGRV 178
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 274 VALRMLFSGWTASGIIGKRGAIVRSLQNASGALISFAAPLTKSGERVVTISALEYLDTRH 333
+ +R+L G IIGK+G V+ ++ SGA I+ + ER+VTI+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISE--GNCPERIVTITG-----PTD 66
Query: 334 SPVQNAAVLVFARSVEVEGQQGFSSGENKGDAVAVSILVGADFVGCLTGSGSSAVSEMED 393
+ + A++ + ++ S +K V + ++V A G L G G S + E+ +
Sbjct: 67 AIFKAFAMIAYKFEEDIINSMSNSPATSK-PPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 394 VTGTDIKLVG------GEQVLGCAAQNDVVIQ 419
TG +++ G E+ + + D +IQ
Sbjct: 126 STGAQVQVAGDMLPNSTERAVTISGTPDAIIQ 157
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALV 192
LL + ++G ++GK G V +MR ESGA+I + + ++++ ITG T A+ KA
Sbjct: 18 LLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGNCPERIVTITGPTDAIFKAFA 73
Query: 193 AVTTCLQH--LSTMEKSPICFNRPI 215
+ + +++M SP P+
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKPPV 98
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 133 LLANTTKIGVVVGKGGRNVTRMRIESGAKIV----MLPPPACAAIDDQLIQITGATLAVK 188
LL + ++G ++G+ G + ++ SG ++V MLP ++++++ G ++
Sbjct: 137 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQST-----ERIVEVQGTPEGIQ 191
Query: 189 KALVAVTTCL-----QHLSTMEKSPICFNRPIEKV-------FYSNSSDPHREFFPHLSL 236
+A+ + CL + T+ +P+ +P F S P +
Sbjct: 192 RAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSSSGSTSGGAGFNQGSGRSDYGGSPRVMR 251
Query: 237 VPPLTGNPSD---NASEFHSSSADAD---RDHPGLDKKGRK---QEVALRMLFSGWTASG 287
TGN +D +S ++ +D+D R P D+ G + Q +++ G
Sbjct: 252 ----TGNGADFSNGSSRPYNRRSDSDAALRGPPTHDENGEEIQTQNISIPADMVGC---- 303
Query: 288 IIGKRGAIVRSLQNASGALISFA-APLTKSGERVVTI 323
IIG+ G+ + ++ SGA IS A AP ++GER+ TI
Sbjct: 304 IIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTI 340
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 134 LANTTKIGVVVGKGGRNVTRMRIESGAKIVMLPPPACAAIDDQLIQITGATLAVKKALVA 193
+ ++ + GV++GKGG+NV +R E+G K + + D+++ ITG A+ +A
Sbjct: 52 IVSSKEAGVIIGKGGKNVADLRDETGVKAGV--SKVVQGVHDRVLTITGGCDAISRAYAI 109
Query: 194 VTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPH 233
V L +E +P + V SN + P + H
Sbjct: 110 VARAL-----LEGAPAMG---MGGVVQSNGTHPIKLLISH 141
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 101/243 (41%), Gaps = 43/243 (17%)
Query: 7 PYGYSSKRRGPLNLPDDVVSFRLVCPTPVVGGLIGRSGSIISSIRRDTKCRIHCEGGFPG 66
P GY S G + P + R++ P+ +VG +IG+SG+ I+SI + ++ ++ G
Sbjct: 179 PGGYYSGHVG--HPPPKELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAG 236
Query: 67 SDHRVILVVGSGSIDRRIMFCENDVVVEGGEVSSTQEAVIRVFERMW-EVEAEVEGDGDG 125
+ G +D+ V+ G + +A R+ E M E + +G
Sbjct: 237 G------IFADGQVDK--------VINIHGTNEACSQACKRILEVMLQESQQPATNTMNG 282
Query: 126 ------DDVAYCGLLANTTKIGVVVGKGGRNVTRMRIESGAKI---VMLPPPACAAIDDQ 176
D+ LLA+ +G V+G+ G + ++ E+ AKI M P ++
Sbjct: 283 GTSRRRDEPITLRLLAHNNLVGRVIGRSGIVIKKIMEETNAKINVSQMTDP------RER 336
Query: 177 LIQITGATLAVKKALVAVTTCLQHLSTMEKSPICFNRPIEKVFYSNSSDPHREFFPHLSL 236
+I I G + KA +T+ ++ C+ + +++ P + P
Sbjct: 337 VIVIRGNLEEMSKAQQQITSKMRQ---------CYEQDLQQAMMGGYGGP--DLGPPPQQ 385
Query: 237 VPP 239
+PP
Sbjct: 386 IPP 388
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,554,769,797
Number of Sequences: 23463169
Number of extensions: 419384080
Number of successful extensions: 1009609
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 1289
Number of HSP's that attempted gapping in prelim test: 997213
Number of HSP's gapped (non-prelim): 10069
length of query: 587
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 439
effective length of database: 8,886,646,355
effective search space: 3901237749845
effective search space used: 3901237749845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)