Query 007848
Match_columns 587
No_of_seqs 361 out of 2257
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 11:59:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007848.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007848hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 3.1E-33 1.1E-37 285.3 25.3 224 47-297 19-246 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 2.9E-33 1E-37 287.6 14.7 224 47-298 20-249 (296)
3 2z0u_A WW domain-containing pr 99.8 3.4E-19 1.1E-23 165.3 6.9 126 185-310 27-154 (155)
4 3b7y_A E3 ubiquitin-protein li 99.8 8.7E-18 3E-22 155.0 14.9 126 47-197 20-152 (153)
5 3fdw_A Synaptotagmin-like prot 99.7 3.8E-18 1.3E-22 156.6 11.2 126 185-311 7-134 (148)
6 2ep6_A MCTP2 protein; beta san 99.7 1.1E-17 3.8E-22 150.6 13.6 121 44-197 10-131 (133)
7 3rdl_A Protein kinase C alpha 99.7 7E-18 2.4E-22 152.4 10.7 123 186-313 3-126 (137)
8 1ugk_A Synaptotagmin IV, KIAA1 99.7 1.7E-17 5.8E-22 150.4 12.6 112 185-299 6-120 (138)
9 2dmh_A Myoferlin; beta-sandwic 99.7 3.2E-17 1.1E-21 148.7 14.5 121 46-198 6-133 (140)
10 2bwq_A Regulating synaptic mem 99.7 7.3E-18 2.5E-22 150.7 9.9 121 187-309 4-128 (129)
11 3m7f_B E3 ubiquitin-protein li 99.7 3.8E-17 1.3E-21 154.5 15.1 129 46-199 7-142 (176)
12 2dmg_A KIAA1228 protein; beta- 99.7 6.5E-18 2.2E-22 153.8 8.8 126 185-312 8-136 (142)
13 2ep6_A MCTP2 protein; beta san 99.7 7.2E-18 2.5E-22 151.8 8.7 120 195-330 7-127 (133)
14 3kwu_A MUNC13-1; calcium bindi 99.7 6.9E-17 2.4E-21 148.0 15.1 129 46-196 16-145 (148)
15 2chd_A Rabphilin-3A, exophilin 99.7 1E-17 3.5E-22 152.5 9.1 123 185-311 13-138 (142)
16 2d8k_A Synaptotagmin VII; exoc 99.7 1.8E-17 6.3E-22 150.7 10.8 124 185-311 10-135 (141)
17 1rlw_A Phospholipase A2, CALB 99.7 1.8E-17 6.1E-22 147.6 10.4 119 47-198 3-125 (126)
18 1a25_A CALB, protein kinase C 99.7 1.2E-17 4.2E-22 153.4 9.5 123 185-312 17-140 (149)
19 3fbk_A RGS3, RGP3, regulator o 99.7 1.9E-17 6.4E-22 153.0 10.6 125 185-312 11-138 (153)
20 3b7y_A E3 ubiquitin-protein li 99.7 4.4E-17 1.5E-21 150.2 13.0 124 199-330 18-148 (153)
21 1v27_A Regulating synaptic mem 99.7 1.6E-17 5.6E-22 150.7 9.9 126 185-312 5-134 (141)
22 1rsy_A Synaptotagmin I; calciu 99.7 2E-17 6.8E-22 152.6 10.6 124 185-311 26-150 (152)
23 1wfm_A Synaptotagmin XIII; C2 99.7 3.7E-17 1.3E-21 148.4 12.1 124 185-313 10-134 (138)
24 3f04_A Synaptotagmin-1; C2A, c 99.7 1.6E-17 5.5E-22 151.4 9.6 122 185-309 18-140 (143)
25 1wfj_A Putative elicitor-respo 99.7 3.8E-17 1.3E-21 147.5 11.8 121 45-199 8-131 (136)
26 2q3x_A Regulating synaptic mem 99.7 2.8E-17 9.5E-22 154.8 10.8 122 185-312 16-140 (171)
27 3n5a_A Synaptotagmin-7; calciu 99.7 9.8E-18 3.4E-22 151.5 7.3 122 187-311 2-124 (138)
28 2cm5_A Rabphilin-3A; protein t 99.7 1.2E-17 4.1E-22 156.3 7.8 124 185-311 21-145 (166)
29 3pyc_A E3 ubiquitin-protein li 99.7 1.5E-16 5.3E-21 142.9 14.5 121 47-195 5-130 (132)
30 1gmi_A Protein kinase C, epsil 99.7 7E-17 2.4E-21 146.0 12.1 113 47-197 6-132 (136)
31 1w15_A Synaptotagmin IV; metal 99.7 6.4E-17 2.2E-21 149.2 11.3 124 185-311 14-138 (153)
32 2enp_A B/K protein; C2 type 1, 99.7 6.3E-17 2.2E-21 148.2 10.8 125 185-313 10-142 (147)
33 1rh8_A Piccolo protein; beta-s 99.7 1.3E-17 4.6E-22 151.7 5.8 123 185-311 4-138 (142)
34 2fk9_A Protein kinase C, ETA t 99.7 1.3E-16 4.6E-21 147.7 12.4 103 46-166 28-145 (157)
35 3m7f_B E3 ubiquitin-protein li 99.7 1.5E-16 5.2E-21 150.3 13.0 124 199-330 6-136 (176)
36 2z0u_A WW domain-containing pr 99.7 4.8E-17 1.6E-21 150.7 9.0 108 47-165 43-154 (155)
37 2b3r_A Phosphatidylinositol-4- 99.7 1.5E-16 5.2E-21 143.6 12.1 107 47-166 20-130 (134)
38 1tjx_A Similar to synaptotagmi 99.7 1.2E-16 4.1E-21 148.4 11.7 111 185-296 9-120 (159)
39 2dmh_A Myoferlin; beta-sandwic 99.7 1.2E-16 4.1E-21 144.9 11.4 118 200-330 6-128 (140)
40 2b3r_A Phosphatidylinositol-4- 99.7 1.1E-16 3.7E-21 144.5 9.3 119 188-310 9-129 (134)
41 2nq3_A Itchy homolog E3 ubiqui 99.7 3.7E-16 1.3E-20 147.4 12.9 120 46-197 35-160 (173)
42 3kwu_A MUNC13-1; calcium bindi 99.7 3E-16 1E-20 143.8 11.7 115 200-330 16-142 (148)
43 3pyc_A E3 ubiquitin-protein li 99.7 6.9E-16 2.3E-20 138.6 13.8 119 201-330 5-128 (132)
44 3rdl_A Protein kinase C alpha 99.7 4.5E-16 1.5E-20 140.4 12.2 107 47-166 16-124 (137)
45 3f04_A Synaptotagmin-1; C2A, c 99.7 2.5E-16 8.5E-21 143.5 10.4 106 47-166 34-142 (143)
46 1a25_A CALB, protein kinase C 99.7 4.5E-16 1.5E-20 142.9 12.1 107 47-166 31-139 (149)
47 3fdw_A Synaptotagmin-like prot 99.7 3E-16 1E-20 143.9 10.5 108 47-166 23-134 (148)
48 2chd_A Rabphilin-3A, exophilin 99.7 4.6E-16 1.6E-20 141.5 11.6 108 47-166 29-140 (142)
49 2bwq_A Regulating synaptic mem 99.7 4.4E-16 1.5E-20 139.1 11.0 106 47-165 18-129 (129)
50 1rsy_A Synaptotagmin I; calciu 99.6 5.4E-16 1.9E-20 142.9 11.9 106 47-166 42-150 (152)
51 2d8k_A Synaptotagmin VII; exoc 99.6 4.8E-16 1.6E-20 141.3 11.0 106 47-166 26-135 (141)
52 2q3x_A Regulating synaptic mem 99.6 5.8E-16 2E-20 145.8 11.8 107 47-166 30-139 (171)
53 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.1E-15 7.1E-20 153.2 16.0 139 185-330 3-142 (284)
54 1ugk_A Synaptotagmin IV, KIAA1 99.6 1.4E-15 4.7E-20 137.7 12.9 106 47-166 22-133 (138)
55 1wfj_A Putative elicitor-respo 99.6 5.7E-16 2E-20 139.7 9.9 114 200-330 9-125 (136)
56 1v27_A Regulating synaptic mem 99.6 6.1E-16 2.1E-20 140.3 9.6 107 47-166 21-133 (141)
57 1rh8_A Piccolo protein; beta-s 99.6 1.5E-16 5.2E-21 144.6 5.6 108 48-166 19-138 (142)
58 1dqv_A Synaptotagmin III; beta 99.6 2.4E-15 8.2E-20 154.0 14.9 138 185-330 4-144 (296)
59 2dmg_A KIAA1228 protein; beta- 99.6 6.5E-16 2.2E-20 140.5 9.4 107 47-166 24-135 (142)
60 1wfm_A Synaptotagmin XIII; C2 99.6 1.3E-15 4.4E-20 138.2 11.3 104 47-166 26-132 (138)
61 2enp_A B/K protein; C2 type 1, 99.6 9.5E-16 3.2E-20 140.3 10.2 106 47-166 26-141 (147)
62 3fbk_A RGS3, RGP3, regulator o 99.6 1.9E-15 6.5E-20 139.5 11.8 107 47-166 27-137 (153)
63 2fk9_A Protein kinase C, ETA t 99.6 8.3E-16 2.8E-20 142.4 9.1 92 199-299 27-129 (157)
64 3n5a_A Synaptotagmin-7; calciu 99.6 3.1E-15 1.1E-19 134.9 12.5 94 47-152 16-112 (138)
65 1tjx_A Similar to synaptotagmi 99.6 3.5E-15 1.2E-19 138.5 13.1 108 47-166 25-147 (159)
66 1rlw_A Phospholipase A2, CALB 99.6 6.4E-16 2.2E-20 137.4 7.5 103 201-309 3-109 (126)
67 1w15_A Synaptotagmin IV; metal 99.6 2.8E-15 9.7E-20 138.1 12.0 93 47-151 30-125 (153)
68 2nq3_A Itchy homolog E3 ubiqui 99.6 4.9E-15 1.7E-19 139.7 12.9 117 199-330 34-156 (173)
69 1gmi_A Protein kinase C, epsil 99.6 2.6E-15 8.9E-20 135.7 9.5 91 200-299 5-107 (136)
70 2cm5_A Rabphilin-3A; protein t 99.6 9.7E-15 3.3E-19 136.5 12.6 94 47-152 37-133 (166)
71 3jzy_A Intersectin 2; C2 domai 99.5 4E-14 1.4E-18 155.6 12.2 114 47-195 387-505 (510)
72 3nsj_A Perforin-1; pore formin 99.5 1.1E-13 3.6E-18 152.1 11.9 96 47-164 394-491 (540)
73 3jzy_A Intersectin 2; C2 domai 99.4 3.9E-13 1.3E-17 147.7 11.7 93 199-299 385-478 (510)
74 3nsj_A Perforin-1; pore formin 99.4 3.7E-13 1.3E-17 147.8 11.4 87 201-295 394-481 (540)
75 1cjy_A CPLA2, protein (cytosol 99.3 9.6E-13 3.3E-17 148.9 7.9 106 46-166 17-126 (749)
76 2cjt_A UNC-13 homolog A, MUNC1 99.3 4.6E-12 1.6E-16 113.7 10.7 84 201-299 5-90 (131)
77 1djx_A PLC-D1, phosphoinositid 99.3 6.6E-12 2.3E-16 140.7 12.9 105 47-166 497-605 (624)
78 2cjt_A UNC-13 homolog A, MUNC1 99.3 7.8E-12 2.7E-16 112.2 10.6 94 47-164 5-102 (131)
79 3l9b_A Otoferlin; C2-domain, b 99.3 6E-12 2E-16 112.7 9.4 119 47-201 19-143 (144)
80 2cjs_A UNC-13 homolog A, MUNC1 99.3 4.4E-12 1.5E-16 118.6 8.1 84 201-299 14-99 (167)
81 3l9b_A Otoferlin; C2-domain, b 99.3 1.5E-11 5.2E-16 110.0 9.5 87 202-299 22-110 (144)
82 3pfq_A PKC-B, PKC-beta, protei 99.2 1.1E-11 3.6E-16 141.0 10.1 122 185-311 158-280 (674)
83 2cjs_A UNC-13 homolog A, MUNC1 99.2 2.5E-11 8.5E-16 113.5 10.4 85 47-155 14-100 (167)
84 1cjy_A CPLA2, protein (cytosol 99.2 5.6E-12 1.9E-16 142.6 6.3 105 199-309 16-124 (749)
85 1djx_A PLC-D1, phosphoinositid 99.2 2.8E-11 9.6E-16 135.6 10.3 107 200-312 496-606 (624)
86 3pfq_A PKC-B, PKC-beta, protei 99.1 9.8E-11 3.4E-15 133.0 11.2 107 47-166 172-280 (674)
87 3bxj_A RAS GTPase-activating p 99.0 5.3E-11 1.8E-15 129.8 -0.5 101 200-313 10-118 (483)
88 3bxj_A RAS GTPase-activating p 98.9 1.1E-10 3.9E-15 127.2 -0.4 100 48-166 12-116 (483)
89 3ohm_B 1-phosphatidylinositol- 98.8 1.1E-08 3.8E-13 117.6 11.2 97 48-166 726-826 (885)
90 2zkm_X 1-phosphatidylinositol- 98.8 2.4E-08 8.1E-13 114.7 11.8 98 47-166 678-780 (799)
91 3qr0_A Phospholipase C-beta (P 98.8 2.5E-08 8.7E-13 114.0 11.9 97 48-166 651-752 (816)
92 3ohm_B 1-phosphatidylinositol- 98.7 1.4E-08 4.9E-13 116.7 8.8 98 202-312 726-827 (885)
93 2zkm_X 1-phosphatidylinositol- 98.6 3.9E-08 1.3E-12 112.8 8.9 99 201-312 678-781 (799)
94 3qr0_A Phospholipase C-beta (P 98.6 2.1E-07 7.1E-12 106.5 12.2 99 201-312 650-753 (816)
95 2enj_A NPKC-theta, protein kin 98.4 2.4E-06 8.3E-11 75.2 11.4 93 66-197 31-129 (138)
96 1yrk_A NPKC-delta, protein kin 98.3 5.2E-06 1.8E-10 72.2 11.8 94 65-197 25-124 (126)
97 4hqo_A Sporozoite surface prot 98.2 1.1E-05 3.6E-10 80.8 12.4 154 349-528 18-176 (266)
98 4hqf_A Thrombospondin-related 98.1 3.9E-05 1.3E-09 77.2 15.5 154 349-528 21-179 (281)
99 3n2n_F Anthrax toxin receptor 98.1 3.9E-05 1.3E-09 71.5 13.5 149 349-528 7-158 (185)
100 1shu_X Anthrax toxin receptor 98.1 2.5E-05 8.6E-10 72.7 11.5 148 349-528 6-155 (182)
101 2xgg_A Microneme protein 2; A/ 98.0 3.1E-05 1.1E-09 72.2 11.7 141 349-518 17-162 (178)
102 1q0p_A Complement factor B; VO 97.9 4.2E-05 1.4E-09 73.5 11.0 153 348-529 14-192 (223)
103 1n3y_A Integrin alpha-X; alpha 97.9 7.9E-05 2.7E-09 70.3 11.1 148 350-528 10-166 (198)
104 1mf7_A Integrin alpha M; cell 97.8 1.7E-05 5.8E-10 75.0 6.2 149 349-528 5-162 (194)
105 1ijb_A VON willebrand factor; 97.8 0.00014 4.8E-09 69.2 12.5 147 349-527 13-167 (202)
106 2b2x_A Integrin alpha-1; compu 97.8 0.00037 1.3E-08 67.3 15.2 137 349-518 22-164 (223)
107 3ibs_A Conserved hypothetical 97.8 0.00017 5.9E-09 69.1 12.7 140 349-518 11-150 (218)
108 4fx5_A VON willebrand factor t 97.8 0.00027 9.4E-09 76.3 15.1 154 347-527 75-230 (464)
109 2x5n_A SPRPN10, 26S proteasome 97.8 0.0005 1.7E-08 65.2 15.1 167 351-557 4-175 (192)
110 1v7p_C Integrin alpha-2; snake 97.8 0.0003 1E-08 66.7 13.4 136 349-517 6-147 (200)
111 4b4t_W RPN10, 26S proteasome r 97.8 0.00044 1.5E-08 68.8 14.9 146 352-526 6-157 (268)
112 1pt6_A Integrin alpha-1; cell 97.6 0.00064 2.2E-08 65.1 13.6 137 349-518 7-149 (213)
113 1atz_A VON willebrand factor; 97.6 0.00047 1.6E-08 64.6 12.2 146 349-528 5-157 (189)
114 2x31_A Magnesium-chelatase 60 97.5 1.2E-05 4E-10 75.7 -0.3 146 349-527 5-161 (189)
115 1yrk_A NPKC-delta, protein kin 97.5 0.00065 2.2E-08 59.0 10.2 70 221-300 26-97 (126)
116 2odp_A Complement C2; C3/C5 co 97.4 0.00041 1.4E-08 75.5 10.6 155 346-529 6-186 (509)
117 2enj_A NPKC-theta, protein kin 97.4 0.00061 2.1E-08 60.0 8.9 70 221-300 31-102 (138)
118 1rrk_A Complement factor B; BB 97.3 0.0013 4.4E-08 71.2 11.9 155 350-529 2-178 (497)
119 3zqk_A VON willebrand factor; 97.2 0.0011 3.6E-08 62.9 9.0 143 348-528 20-169 (199)
120 3hrz_D Complement factor B; se 97.2 0.0019 6.6E-08 73.6 12.5 154 346-528 240-419 (741)
121 1mjn_A Integrin alpha-L; rossm 97.0 0.0032 1.1E-07 58.5 10.6 142 349-527 2-151 (179)
122 3k6s_A Integrin alpha-X; cell 97.0 0.0011 3.7E-08 78.8 8.6 149 349-528 130-287 (1095)
123 1jey_B KU80; double-strand DNA 95.6 0.056 1.9E-06 59.6 11.6 153 346-518 4-170 (565)
124 1jey_A KU70; double-strand DNA 95.3 0.074 2.5E-06 59.2 11.5 156 350-521 36-212 (609)
125 1yvr_A RO autoantigen, 60-kDa 94.4 0.31 1.1E-05 53.2 13.2 138 347-521 366-507 (538)
126 2nvo_A RO sixty-related protei 93.3 0.32 1.1E-05 53.1 10.6 135 348-520 361-502 (535)
127 2iue_A Pactolus I-domain; memb 80.1 4.4 0.00015 38.4 7.7 112 349-493 3-119 (212)
128 3l4c_A Dedicator of cytokinesi 73.3 15 0.00053 34.8 9.3 43 82-124 75-119 (220)
129 2ww8_A RRGA, cell WALL surface 70.1 15 0.00052 42.4 10.2 42 449-492 351-392 (893)
130 3rag_A Uncharacterized protein 66.4 4.2 0.00014 39.3 3.8 42 478-519 9-50 (242)
131 2wxf_A Phosphatidylinositol-4, 66.0 12 0.00042 43.3 8.3 93 201-298 217-325 (940)
132 3l4c_A Dedicator of cytokinesi 63.6 44 0.0015 31.7 10.2 60 237-296 75-139 (220)
133 3fcs_B Integrin beta-3; beta p 62.4 10 0.00036 42.4 6.6 51 439-491 200-255 (690)
134 3hhm_A Phosphatidylinositol-4, 56.9 21 0.00074 41.8 8.1 95 201-299 355-457 (1091)
135 1e7u_A Phosphatidylinositol 3- 49.7 24 0.00083 40.9 7.0 77 221-299 237-332 (961)
136 2y3a_A Phosphatidylinositol-4, 41.1 17 0.00059 42.7 4.1 93 201-298 353-471 (1092)
137 3k6s_B Integrin beta-2; cell r 40.0 15 0.0005 41.1 3.1 69 440-511 193-300 (687)
138 3rag_A Uncharacterized protein 37.0 76 0.0026 30.5 7.3 102 340-470 122-227 (242)
139 1e7u_A Phosphatidylinositol 3- 30.2 1.6E+02 0.0054 34.2 9.6 106 46-152 217-330 (961)
140 2yrb_A Protein fantom; beta sa 29.1 96 0.0033 27.6 6.0 95 47-157 18-121 (156)
141 3hhm_A Phosphatidylinositol-4, 26.7 2.7E+02 0.0092 32.7 10.7 98 46-151 354-454 (1091)
142 3t3p_B Integrin beta-3; integr 23.8 90 0.0031 33.1 5.6 51 439-491 200-255 (472)
143 3l6u_A ABC-type sugar transpor 21.4 3.1E+02 0.011 25.6 8.8 92 456-556 22-114 (293)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=3.1e-33 Score=285.31 Aligned_cols=224 Identities=21% Similarity=0.308 Sum_probs=188.6
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.++ ++|++|+++|..|++||||+|++.+..+ ...||+++++|+||.|+|+|.|.+..+. .+.|+|+|||.|
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~---~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d 95 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFD 95 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT---SCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECC
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC---ceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECC
Confidence 456666 6899999999999999999999986333 3789999999999999999999887654 369999999999
Q ss_pred CCccccccccccccccccccceeeecchhhccCCeeEEEEccccccccccccccCCCCCCCCcccEEEeecceecccccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINSKTT 203 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~~~~~~l 203 (587)
.. +++++||++.++|.++........|++|... ... .....|+|.+.+.+.+..+.+
T Consensus 96 ~~-----------~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~----------~~~--~~~~~G~i~l~l~~~p~~~~l 152 (284)
T 2r83_A 96 RF-----------SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA----------EKE--EQEKLGDICFSLRYVPTAGKL 152 (284)
T ss_dssp SS-----------SCCCEEEEEEEEGGGCCCSSCEEEEEECBCC----------SSC--CCCCCCEEEEEEEEETTTTEE
T ss_pred CC-----------CCCceeEEEEEcchhcccCCcceeEEEeecc----------ccc--cccccccEEEEEEecCcCCce
Confidence 75 7899999999999999877777889999651 110 124579999999999888999
Q ss_pred ceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEeccCCC
Q 007848 204 TELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNG 282 (587)
Q Consensus 204 ~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d~~~ 282 (587)
.+.+++|++|+.+|.+|.+||||++++.. +|.+..++||+++++++||+||| |.|.+..-.-....|.|+|||++..+
T Consensus 153 ~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~ 231 (284)
T 2r83_A 153 TVVILEAKNLKKMDVGGLSDPYVKIHLMQ-NGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIG 231 (284)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSS
T ss_pred EEEEEEeECCCCcCCCCCcCeEEEEEEEe-CCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCC
Confidence 99999999999999999999999999976 46666789999999999999998 66665311101457999999999999
Q ss_pred CCceeEEEEEechhh
Q 007848 283 KHDLIGKVQKSLADL 297 (587)
Q Consensus 283 ~dd~IG~~~i~l~~l 297 (587)
++++||++.+++..+
T Consensus 232 ~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 232 KNDAIGKVFVGYNST 246 (284)
T ss_dssp CCCEEEEEEEETTCC
T ss_pred CCcEEEEEEECCCCC
Confidence 999999999999763
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=100.00 E-value=2.9e-33 Score=287.59 Aligned_cols=224 Identities=21% Similarity=0.353 Sum_probs=184.0
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCce--eEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~--q~L~~~V~D~D 123 (587)
..+.++ ++|++|+++|..|++||||+|++.++ +. ...||+++++|+||.|+|+|.|.+.++.. ..|+|+|||+|
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~-~~--~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPD-RK--KKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTS-TT--SCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcC-CC--eeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 456665 69999999999999999999999752 22 58899999999999999999999877654 48999999999
Q ss_pred CCccccccccccccccccccceeee-cchhhc-cCCeeEEEEccccccccccccccCCCCCCCCcccEEEeecceecccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCT-LSQIVT-RKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINSK 201 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~-L~~l~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~~~~~ 201 (587)
.. +++++||++.++ +.++.. ......|++|.. ..+ .....|+|.+.+.+.+..+
T Consensus 97 ~~-----------~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~-----------~~~--~~~~~G~i~vsl~y~~~~~ 152 (296)
T 1dqv_A 97 RF-----------SRHDLIGQVVLDNLLELAEQPPDRPLWRDILE-----------GGS--EKADLGELNFSLCYLPTAG 152 (296)
T ss_dssp SS-----------SCCCEEEEEECCCTTGGGSSCSSCCCCEECBC-----------CSS--CCSCCCEEEEEEEEETTTT
T ss_pred CC-----------CCCceEEEEEeccccccccCCccceeeecccc-----------ccc--cccccceEEEEEEeccccc
Confidence 75 789999999995 555544 234457888865 111 2245799999999999889
Q ss_pred ccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEeccC
Q 007848 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 280 (587)
Q Consensus 202 ~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d~ 280 (587)
.+.+.+++|++|+.+|.+|.+||||++++.. +|++..++||+++++++||+||| |.|.+..-.-....|.|+|||++.
T Consensus 153 ~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 231 (296)
T 1dqv_A 153 LLTVTIIKASNLKAMDLTGFSDPYVKASLIS-EGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDC 231 (296)
T ss_dssp EEEEEEEEEESCCCCSSSSCCCEEEEECCCT-TCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCS
T ss_pred eeEEEEEEeecCCccCCCCCCCcEEEEEEEe-CCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCC
Confidence 9999999999999999999999999999976 46556689999999999999999 555443111114689999999999
Q ss_pred CCCCceeEEEEEechhhh
Q 007848 281 NGKHDLIGKVQKSLADLE 298 (587)
Q Consensus 281 ~~~dd~IG~~~i~l~~l~ 298 (587)
.+++++||++.+++.++.
T Consensus 232 ~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 232 IGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp SSCCEEEEECCCSSCTTC
T ss_pred CCCCceEEEEEECCccCC
Confidence 999999999999999873
No 3
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.76 E-value=3.4e-19 Score=165.30 Aligned_cols=126 Identities=13% Similarity=0.134 Sum_probs=102.8
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
...|+|.+++.+.+..+.+.+.+++|+||+.+|.+|.+||||++++.+.++.+..++||+++++|+||+||| |.|.+..
T Consensus 27 ~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 27 VGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp -CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 457999999999999999999999999999999999999999999987444444579999999999999998 7776542
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhh-ccCCCceeEee
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEK-LHSSGQGQNLF 310 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~-~~~~~~~~~l~ 310 (587)
-......|.|+|||+|..+++++||++.+++.++.. ......||.|.
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 101146899999999999999999999999999942 22233456553
No 4
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.76 E-value=8.7e-18 Score=154.98 Aligned_cols=126 Identities=20% Similarity=0.345 Sum_probs=97.2
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQ 125 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~~ 125 (587)
..+.++ ++|++|+++|..|++||||+|++.+..+.+....||+++++|+||.|+|.|.|.+..+ .+.|+|+|||+|..
T Consensus 20 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d~d~~ 98 (153)
T 3b7y_A 20 RIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFDENRL 98 (153)
T ss_dssp EEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEECCSS
T ss_pred cEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEECCCC
Confidence 567776 6899999999999999999999986444566899999999999999999999988754 47899999999975
Q ss_pred ccccccccccccccccccceeeecchhhccCCe------eEEEEccccccccccccccCCCCCCCCcccEEEeeccee
Q 007848 126 FHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNR------SLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (587)
Q Consensus 126 ~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~------~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~ 197 (587)
+++++||++.++|.++...... ..|++|.. +.+ ..+..|+|.+++.+.
T Consensus 99 -----------~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~-----------~~~--~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 99 -----------TRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHP-----------RSH--KSRVKGYLRLKMTYL 152 (153)
T ss_dssp -----------SCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBC-----------SST--TCCCCSEEEEEEEEC
T ss_pred -----------cCCCeeEEEEEEHHHcccCCCccccccccccccccc-----------ccC--CCCcceEEEEEEEEe
Confidence 7899999999999999766543 47999965 211 225579999988764
No 5
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.75 E-value=3.8e-18 Score=156.62 Aligned_cols=126 Identities=11% Similarity=0.184 Sum_probs=104.0
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCC-CCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKD-LFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ 262 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d-~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~ 262 (587)
+.+|+|.+++++.+..+.+.+.+++|++|+.+| ..+.+||||++++.. ++.+..++||+++++++||+||| |.|.+.
T Consensus 7 ~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 7 FVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLP-DKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEET-CCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred ccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEc-CCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 567999999999999999999999999999998 689999999999976 34445589999999999999998 666653
Q ss_pred ecCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 263 QVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 263 ~l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
.-......|.|+|||++..+++++||++.++|.++........|++|..
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 2111245799999999999999999999999999975444445666643
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.74 E-value=1.1e-17 Score=150.57 Aligned_cols=121 Identities=21% Similarity=0.292 Sum_probs=99.6
Q ss_pred CcccEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEc
Q 007848 44 GLFSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDV 122 (587)
Q Consensus 44 ~~~~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~ 122 (587)
.....+.++ ++|++|+++|..|++||||+|++.+ ...||+++++++||.|+|.|.|.+.. ..+.|+|+|||+
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~~-~~~~l~i~V~d~ 82 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN------DRLQTHTVYKNLNPEWNKVFTFPIKD-IHDVLEVTVFDE 82 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT------EEEECCCCSSCSSCCCCEEEEEEESC-TTCEEEEEEEEE
T ss_pred CCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC------EEEEeeeecCCCCCccccEEEEEecC-CCCEEEEEEEEC
Confidence 344677887 6899999999999999999999964 47899999999999999999998864 347899999999
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccccccccccccccCCCCCCCCcccEEEeeccee
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~ 197 (587)
|.. +++++||++.++|.++.. +...|++|.+ ... .....|+|++++..+
T Consensus 83 d~~-----------~~~~~lG~~~i~l~~l~~--~~~~w~~L~~-----------~~~--~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 83 DGD-----------KPPDFLGKVAIPLLSIRD--GQPNCYVLKN-----------KDL--EQAFKGVIYLEMDLI 131 (133)
T ss_dssp ETT-----------EEEEECCBCEEEGGGCCS--SCCEECCCBC-----------SCT--TSCCSSEEEEEEEEE
T ss_pred CCC-----------CCCCeeEEEEEEHHHccC--CCceEEEeec-----------CCC--CCccceEEEEEEEEE
Confidence 975 789999999999999964 4467999965 221 124679999987654
No 7
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=7e-18 Score=152.38 Aligned_cols=123 Identities=17% Similarity=0.330 Sum_probs=102.1
Q ss_pred cccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeec
Q 007848 186 HCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV 264 (587)
Q Consensus 186 ~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l 264 (587)
.+|+|.+++++ ..+.+.+.+++|++|+.+|.+|.+||||++++.. ++.....+||+++++++||.||| |.|.+..-
T Consensus 3 ~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 79 (137)
T 3rdl_A 3 KRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIP-DPKNESKQKTKTIRSTLNPQWNESFTFKLKPS 79 (137)
T ss_dssp CCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEC-CTTCCCCEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred cceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEc-CCCCCeeecCceEcCCCCCCcccEEEEEcCch
Confidence 47999999998 5688999999999999999999999999999965 33345689999999999999998 77776421
Q ss_pred CCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeeccc
Q 007848 265 GSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (587)
Q Consensus 265 ~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~~ 313 (587)
+....|.|+|||++..+++++||++.+++.++... ....|+.|.+..
T Consensus 80 -~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~ 126 (137)
T 3rdl_A 80 -DKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKM-PASGWYKLLNQE 126 (137)
T ss_dssp -GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHS-CEEEEEECBCHH
T ss_pred -hcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccC-ccCceEECcCcc
Confidence 22468999999999999999999999999999753 345677776543
No 8
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.73 E-value=1.7e-17 Score=150.37 Aligned_cols=112 Identities=21% Similarity=0.294 Sum_probs=95.6
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCC-CCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEE-e
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLF-SRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-I 261 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~-g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~-~ 261 (587)
..+|+|.+++++.+..+.+.+.+++|++|+.+|.+ +.+||||++++..+ +. .++||+++++++||+||| |.|. +
T Consensus 6 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~-~~--~~~kT~v~~~t~nP~wne~f~f~~v 82 (138)
T 1ugk_A 6 SGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE-KK--HKVKTRVLRKTLDPAFDETFTFYGI 82 (138)
T ss_dssp CCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT-TC--SEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC-CC--ceEecCcCcCCCCCcEeeEEEEcCc
Confidence 45799999999999999999999999999999986 89999999999753 22 589999999999999998 6663 3
Q ss_pred eecCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhh
Q 007848 262 QQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 262 ~~l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~ 299 (587)
..-......|.|+|||++..+++++||++.++|.++..
T Consensus 83 ~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 120 (138)
T 1ugk_A 83 PYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIEL 120 (138)
T ss_dssp CSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCC
T ss_pred CHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccC
Confidence 21011246899999999999999999999999999964
No 9
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.2e-17 Score=148.73 Aligned_cols=121 Identities=21% Similarity=0.280 Sum_probs=100.2
Q ss_pred ccEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecC---ceeEEEEEEEE
Q 007848 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE---VVQTLVFRIYD 121 (587)
Q Consensus 46 ~~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e---~~q~L~~~V~D 121 (587)
...+.++ ++|++|+.+|. +++||||+|++.. +..||+++++++||.|+|.|.|.+..+ ....|+|+|||
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD------EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS------CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC------EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 3567777 68999999999 9999999999964 479999999999999999999987543 45799999999
Q ss_pred cCCCccccccccccccccccccceeeecchhhccCCeeEEEE---ccccccccccccccCCCCCCCCcccEEEeecceec
Q 007848 122 VDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLD---LVRREETITPITEESNPSNRPKHCGKLTVHAEECI 198 (587)
Q Consensus 122 ~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~---L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~~ 198 (587)
+|.. +++++||++.++|.++........|++ |.+ .. .....|+|.+++.+.+
T Consensus 79 ~d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~-----------~~---~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 79 FETI-----------GQNKLIGTATVALKDLTGDQSRSLPYKLISLLN-----------EK---GQDTGATIDLVIGYDP 133 (140)
T ss_dssp TTCS-----------SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEEC-----------TT---CCEEEEEEEEEEEECC
T ss_pred CCCC-----------CCCceEEEEEEEHHHhccCCCceeEEeeeeccC-----------CC---CCCCCCEEEEEEEEEC
Confidence 9975 789999999999999987777778887 543 11 1145699999887755
No 10
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=7.3e-18 Score=150.75 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=95.8
Q ss_pred ccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeec-
Q 007848 187 CGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV- 264 (587)
Q Consensus 187 ~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l- 264 (587)
+|+|.+++++.+..+.+.+.+++|++|+.+|.+|++||||++++..+ +....++||+++++++||+||| |.|.....
T Consensus 4 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 4 SGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD-RSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS-CSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC-CCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 69999999999999999999999999999999999999999999763 3345689999999999999998 77663211
Q ss_pred CCCCCcEEEEEEeccCCCC--CceeEEEEEechhhhhccCCCceeEe
Q 007848 265 GSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNL 309 (587)
Q Consensus 265 ~~~~~~L~i~V~D~d~~~~--dd~IG~~~i~l~~l~~~~~~~~~~~l 309 (587)
......|.|+|||++..++ +++||++.+++.++.. .+...||+|
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~-~~~~~W~~L 128 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALL-DDEPHWYKL 128 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCC-SSCEEEEEC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCC-CcCCccEEC
Confidence 1125799999999999887 8999999999999864 233345544
No 11
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.73 E-value=3.8e-17 Score=154.48 Aligned_cols=129 Identities=19% Similarity=0.326 Sum_probs=98.4
Q ss_pred ccEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCC
Q 007848 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (587)
Q Consensus 46 ~~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~ 124 (587)
...+.++ ++|++|+++|..|++||||+|++.+..+++....||+++++++||.|++.|.|.+..+ .+.|+|+|||+|.
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~d~ 85 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDENR 85 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEECC-
T ss_pred cEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEECCC
Confidence 3567776 6899999999999999999999987555566789999999999999999999988744 4789999999997
Q ss_pred CccccccccccccccccccceeeecchhhccCCe--e----EEEEccccccccccccccCCCCCCCCcccEEEeecceec
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNR--S----LTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECI 198 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~--~----l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~~ 198 (587)
. ++++|||++.++|.++...... . .|++|.. +.. ..+..|+|.+++.+.+
T Consensus 86 ~-----------~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~-----------~~~--~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 86 L-----------TRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHP-----------RSH--KSRVKGYLRLKMTYLP 141 (176)
T ss_dssp --------------CEEEEEEEEESCSCCBC------CCCCEEEECBC-----------SST--TCCCCSEEEEEEEECC
T ss_pred C-----------CCCcEEEEEEEEHHHccccCCcccccccccEEEccc-----------cCC--CCccCEEEEEEEEEEe
Confidence 5 7899999999999999765433 1 6999965 222 2356799999998876
Q ss_pred c
Q 007848 199 N 199 (587)
Q Consensus 199 ~ 199 (587)
.
T Consensus 142 ~ 142 (176)
T 3m7f_B 142 K 142 (176)
T ss_dssp -
T ss_pred C
Confidence 4
No 12
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=6.5e-18 Score=153.83 Aligned_cols=126 Identities=17% Similarity=0.149 Sum_probs=101.9
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|+|.+++++.+..+.+.+.+++|++|+.+|..| +||||++++.. ++.....+||+++++++||+||| |.|.+..
T Consensus 8 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 8 SPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLP-DKRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp CSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEES-CCCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEc-CCCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 557999999999999999999999999999999999 99999999976 34344689999999999999998 7666531
Q ss_pred cCCCCCcEEEEEEeccCCCC--CceeEEEEEechhhhhccCCCceeEeecc
Q 007848 264 VGSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~--dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
-......|.|+|||++..++ +++||++.+++.++........|++|...
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 10013589999999998764 47999999999998643444556766543
No 13
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=7.2e-18 Score=151.84 Aligned_cols=120 Identities=16% Similarity=0.277 Sum_probs=98.2
Q ss_pred ceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEE
Q 007848 195 EECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLII 273 (587)
Q Consensus 195 ~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i 273 (587)
++....+.+.+.+++|++|+.+|..|.+||||++++.+ ..+||+++++++||+||| |.|.+. +....|.|
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~---~~~~~l~i 77 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN------DRLQTHTVYKNLNPEWNKVFTFPIK---DIHDVLEV 77 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT------EEEECCCCSSCSSCCCCEEEEEEES---CTTCEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC------EEEEeeeecCCCCCccccEEEEEec---CCCCEEEE
Confidence 44556777888999999999999999999999999943 267999999999999998 888875 33678999
Q ss_pred EEEeccCCCCCceeEEEEEechhhhhccCCCceeEeecccccCCCCcccccccEEEe
Q 007848 274 ECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 274 ~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
+|||++..+++++||++.+++.++.. +...|++|.++..++ +. .|+|+|.
T Consensus 78 ~V~d~d~~~~~~~lG~~~i~l~~l~~--~~~~w~~L~~~~~~~----~~-~G~i~l~ 127 (133)
T 2ep6_A 78 TVFDEDGDKPPDFLGKVAIPLLSIRD--GQPNCYVLKNKDLEQ----AF-KGVIYLE 127 (133)
T ss_dssp EEEEEETTEEEEECCBCEEEGGGCCS--SCCEECCCBCSCTTS----CC-SSEEEEE
T ss_pred EEEECCCCCCCCeeEEEEEEHHHccC--CCceEEEeecCCCCC----cc-ceEEEEE
Confidence 99999999899999999999999953 445677776544321 22 8999983
No 14
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.72 E-value=6.9e-17 Score=148.04 Aligned_cols=129 Identities=19% Similarity=0.335 Sum_probs=98.1
Q ss_pred ccEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCC
Q 007848 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (587)
Q Consensus 46 ~~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~ 124 (587)
...+.++ ++|++|+++|..|++||||++++.. ...||+++++|+||.|+|.|.|.+..+. +.|+|+|||+|.
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~d~d~ 88 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK------TKKRTKTIYGNLNPVWEENFHFECHNSS-DRIKVRVLDEDD 88 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCCSCSSCEEEEEEEEEECSTT-CEEEEEEEECCC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC------EEEECCccCCCCCCCcccEEEEEecCCC-CEEEEEEEECCC
Confidence 4677887 6899999999999999999999943 5889999999999999999999886543 789999999996
Q ss_pred CccccccccccccccccccceeeecchhhccCCeeEEEEccccccccccccccCCCCCCCCcccEEEeecce
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEE 196 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~ 196 (587)
...+........+++++||++.++|.++. .....|++|.. ..+ .....|+|++++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~-----------~~~--~~~~~G~i~l~l~~ 145 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDK-----------RTD--KSAVSGAIRLHISV 145 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBC-----------SST--TCCCCCEEEEEEEE
T ss_pred CccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEccc-----------CCC--CCCCceEEEEEEEE
Confidence 20000000001257999999999999993 44568999965 221 22457999988754
No 15
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.72 E-value=1e-17 Score=152.55 Aligned_cols=123 Identities=20% Similarity=0.302 Sum_probs=100.8
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEE-ee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-IQ 262 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~-~~ 262 (587)
...|+|.+++.+.+..+.+.+.+++|++|+.+|..|.+||||++++.+ ++.+...+||+++++++||+||+ |.|. +.
T Consensus 13 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 13 TTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLP-GASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp -CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEES-CCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEc-CCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 568999999999989999999999999999999999999999999976 34445689999999999999998 6655 32
Q ss_pred ecCCC-CCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 263 QVGSK-DSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 263 ~l~~~-~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
. .+. ...|.|+|||++..+++++||++.+++.++.. +....|++..
T Consensus 92 ~-~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~--~~~~~~~~~L 138 (142)
T 2chd_A 92 E-EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKA--NQRKNFNICL 138 (142)
T ss_dssp H-HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCT--TCCEEEEEEC
T ss_pred H-HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCC--CCccEEEEec
Confidence 1 111 36899999999999999999999999999964 3344555433
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=1.8e-17 Score=150.71 Aligned_cols=124 Identities=18% Similarity=0.302 Sum_probs=100.8
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|+|.+++.+.+..+.+.+.+++|++|+.+|..|.+||||++++.+++. ..+||+++++++||+||| |.|.+..
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~~~ 86 (141)
T 2d8k_A 10 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK---HKLETKVKRKNLNPHWNETFLFEGFP 86 (141)
T ss_dssp CCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS---SEEECCCCTTCSSCCCCEEEEECSCC
T ss_pred ceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC---ccEeCceEcCCCCCccccEEEECccC
Confidence 457999999999999999999999999999999999999999999975322 378999999999999998 6665311
Q ss_pred c-CCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 264 V-GSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 264 l-~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
. ......|.|+|||++..+++++||++.+++.++........|++|..
T Consensus 87 ~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 87 YEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp HHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred HHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 1 11257899999999999999999999999999965332334555543
No 17
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=1.8e-17 Score=147.57 Aligned_cols=119 Identities=18% Similarity=0.264 Sum_probs=99.1
Q ss_pred cEEEEE-EEEeCCCCC---CCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDR---DVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~---D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~ 122 (587)
..+.++ ++|++|+++ |..|++||||++++.+... ...||+++++++||.|+|+|.|.+..+..+.|+|+|||+
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~ 79 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 79 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEEC
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCC---ceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEEC
Confidence 456676 689999994 7789999999999975322 589999999999999999999998766778999999999
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccccccccccccccCCCCCCCCcccEEEeecceec
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECI 198 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~~ 198 (587)
|.. ++++||++.++|.++........|++|.+ ...|.|+++++..+
T Consensus 80 d~~------------~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------------------~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 80 NYV------------MDETLGTATFTVSSMKVGEKKEVPFIFNQ------------------VTEMVLEMSLEVAS 125 (126)
T ss_dssp CSS------------CCEEEEEEEEEGGGSCTTCEEEEEEEETT------------------TEEEEEEEEEECCC
T ss_pred CCC------------CCceeEEEEEEHHHccCCCcEEEEEEcCC------------------CceEEEEEEEEeCC
Confidence 964 48899999999999987766778999954 34688888876543
No 18
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=1.2e-17 Score=153.40 Aligned_cols=123 Identities=17% Similarity=0.327 Sum_probs=101.5
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|+|.+++++ ..+.+.+.+++|++|+.+|.++.+||||++++.. ++....++||+++++++||+||| |.|.+..
T Consensus 17 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (149)
T 1a25_A 17 ERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKCSLNPEWNETFRFQLKE 93 (149)
T ss_dssp CTTCEEEEEEEE--SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEES-CTTCSSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred CcceEEEEEEEe--cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEEC-CCCCcceEecceeCCCCCCcCCcEEEEEecc
Confidence 557999999987 3567899999999999999999999999999976 34445689999999999999998 7777642
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeecc
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
- +....|.|+|||++..+++++||++.+++.+|... ....|++|.++
T Consensus 94 ~-~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 94 S-DKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp G-GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred c-cCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 1 23468999999999999999999999999999752 33456777654
No 19
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=1.9e-17 Score=152.97 Aligned_cols=125 Identities=19% Similarity=0.222 Sum_probs=100.5
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
...|++.+++.+.+..+.+.|.+++|++|+.+| .|.+||||++++..+ +.....+||+++++++||+||| |.|.+..
T Consensus 11 ~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 11 KVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPE-DSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp --CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESC-SCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred CCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcC-CCCccEEeccccCCCCCCccccEEEEeccc
Confidence 457999999999999999999999999999999 699999999999763 3334579999999999999998 7777632
Q ss_pred cCCCCCcEEEEEEeccCCCC-CceeEEEEEechhhhh-ccCCCceeEeecc
Q 007848 264 VGSKDSPLIIECFNFNSNGK-HDLIGKVQKSLADLEK-LHSSGQGQNLFLS 312 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~-dd~IG~~~i~l~~l~~-~~~~~~~~~l~~~ 312 (587)
.+....|.|+|||++..++ +++||++.+++.+|.. ......|+.|...
T Consensus 89 -~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 89 -EDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp -GGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred -HHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 2334569999999999876 8999999999999964 2233356666543
No 20
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.71 E-value=4.4e-17 Score=150.21 Aligned_cols=124 Identities=18% Similarity=0.343 Sum_probs=91.0
Q ss_pred cccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEe
Q 007848 199 NSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFN 277 (587)
Q Consensus 199 ~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D 277 (587)
..+.+.+.+++|++|+.+|.+|++||||++++......+...+||+++++++||+||| |.|.+. .....|.|+|||
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~---~~~~~l~~~V~d 94 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH---PQQHRLLFEVFD 94 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEEC---TTTCEEEEEEEE
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEec---CCCCEEEEEEEE
Confidence 4556788899999999999999999999999976434456789999999999999998 777765 336789999999
Q ss_pred ccCCCCCceeEEEEEechhhhhccCC------CceeEeecccccCCCCcccccccEEEe
Q 007848 278 FNSNGKHDLIGKVQKSLADLEKLHSS------GQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 278 ~d~~~~dd~IG~~~i~l~~l~~~~~~------~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
++..+++++||++.+++.++...... ..|+.|....+ + .+. .|+|+|.
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~--~--~~~-~G~i~l~ 148 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH--K--SRV-KGYLRLK 148 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST--T--CCC-CSEEEEE
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccC--C--CCc-ceEEEEE
Confidence 99999999999999999999753322 24565533221 1 122 8999984
No 21
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=1.6e-17 Score=150.70 Aligned_cols=126 Identities=13% Similarity=0.163 Sum_probs=103.3
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|+|.+++.+.+..+.+.+.+++|++|+.+|.++.+||||++++..+ +....++||+++++++||+||| |.|....
T Consensus 5 ~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 5 SSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD-RSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSC-CSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecC-CCCCcceeCccccCCCCCccccEEEEccCC
Confidence 5689999999999999999999999999999999999999999998652 3335588999999999999998 7776321
Q ss_pred c-CCCCCcEEEEEEeccCCCC--CceeEEEEEechhhhhccCCCceeEeecc
Q 007848 264 V-GSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 264 l-~~~~~~L~i~V~D~d~~~~--dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
. ......|.|+|||++..++ +++||++.+++.++.. .+...|++|...
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~-~~~~~W~~L~~~ 134 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETALL-DDEPHWYKLQTH 134 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCC-SSEEEEEECBCC
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCC-CCCCceEECccc
Confidence 1 1125799999999999887 8999999999999863 333456666543
No 22
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=2e-17 Score=152.56 Aligned_cols=124 Identities=16% Similarity=0.303 Sum_probs=101.7
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
...|+|.+++.+....+.+.+.+++|++|+.+|.++.+||||++++..+++ ..+||+++++++||+||| |.|.+..
T Consensus 26 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~ 102 (152)
T 1rsy_A 26 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPY 102 (152)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCH
T ss_pred CCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC---ceEeccccCCCCCCcCcccEEEeecH
Confidence 457999999999998999999999999999999999999999999975322 478999999999999998 6665531
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
-.-....|.|+|||++..+++++||++.+++.++........|++|..
T Consensus 103 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 103 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 101257899999999999999999999999999954332345666644
No 23
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=3.7e-17 Score=148.37 Aligned_cols=124 Identities=15% Similarity=0.112 Sum_probs=100.4
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
...|+|.+++.+....+.+.|.+++|+ ++|..|.+||||++++.++++ ...+||+++++++||+||| |.|.+..
T Consensus 10 ~~~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~--~~~~kT~v~~~tlnP~wnE~f~f~v~~ 84 (138)
T 1wfm_A 10 NQAPKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTG--SVEAQTALKKRQLHTTWEEGLVLPLAE 84 (138)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTE--EEEEECCCCCCCSSEECSSCEEEECCT
T ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCC--cccEecccCcCCCCCcCCceEEEEecH
Confidence 457999999999988999999999999 468899999999999976322 3478999999999999998 7776542
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeeccc
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~~ 313 (587)
-......|.|+|||+|..+++++||++.++|.++........|++|..+.
T Consensus 85 ~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 85 EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp TSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 11125789999999999999999999999999996333444566665543
No 24
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.71 E-value=1.6e-17 Score=151.40 Aligned_cols=122 Identities=16% Similarity=0.321 Sum_probs=100.4
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
...|+|.+++.+.+..+.+.+.+++|++|+.+|..+.+||||++++..++. ..+||+++++++||+||| |.|.+..
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~ 94 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPY 94 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS---CCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC---ccEECccCcCCCCCcCcCeEEEeecH
Confidence 457999999999999999999999999999999999999999999976322 378999999999999998 6665432
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEe
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNL 309 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l 309 (587)
-......|.|+|||++..+++++||++.++|.++........|++|
T Consensus 95 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 140 (143)
T 3f04_A 95 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDL 140 (143)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEEC
T ss_pred hhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEEC
Confidence 1112478999999999999999999999999999653333345544
No 25
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.71 E-value=3.8e-17 Score=147.51 Aligned_cols=121 Identities=22% Similarity=0.295 Sum_probs=100.3
Q ss_pred cccEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeec-CCCCCceeeeEEEEeecCceeEEEEEEEEc
Q 007848 45 LFSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDV 122 (587)
Q Consensus 45 ~~~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~-~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~ 122 (587)
....+.++ ++|++|+++|..+++||||+|++.+ ...||++++ +++||.|+|+|.|.+.. ..+.|+|+|||+
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~ 80 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT------QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDK 80 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS------CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCS
T ss_pred CcEEEEEEEEeccCCCCcccCCCcCceEEEEECC------ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEEC
Confidence 34677887 6899999999999999999999965 367999998 89999999999998875 567999999999
Q ss_pred CCCccccccccccccccccccceeeecchhhc-cCCeeEEEEccccccccccccccCCCCCCCCcccEEEeecceecc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVT-RKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECIN 199 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~~~ 199 (587)
|.. +++++||++.++|.++.. ......|++|.. ..+..|+|++++.+.+.
T Consensus 81 ~~~-----------~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~----------------~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 81 DVG-----------TEDDAVGEATIPLEPVFVEGSIPPTAYNVVK----------------DEEYKGEIWVALSFKPS 131 (136)
T ss_dssp SSC-----------TTTCCSEEEEEESHHHHHHSEEEEEEEEEEE----------------TTEEEEEEEEEEEEEEC
T ss_pred CCC-----------CCCceEEEEEEEHHHhccCCCCCcEEEEeec----------------CCccCEEEEEEEEEEeC
Confidence 965 789999999999999954 333457898853 12568999999887654
No 26
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.71 E-value=2.8e-17 Score=154.80 Aligned_cols=122 Identities=16% Similarity=0.237 Sum_probs=100.3
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCC-CCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDL-FSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ 262 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~-~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~ 262 (587)
...|+|.+.+++ ..+.+.+.+++|++|+.+|. +|.+||||++++.. ++++..++||+++++|+||+||| |.|.+.
T Consensus 16 ~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (171)
T 2q3x_A 16 PAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLE-NGACIAKKKTRIARKTLDPLYQQSLVFDES 92 (171)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEECSSC
T ss_pred CCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEEC-CCccccceeCccCCCCCCCCCCcEEEEEec
Confidence 457999999988 57789999999999999995 79999999999977 46666789999999999999998 666653
Q ss_pred ecCCCCCcEEEEEE-eccCCCCCceeEEEEEechhhhhccCCCceeEeecc
Q 007848 263 QVGSKDSPLIIECF-NFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 263 ~l~~~~~~L~i~V~-D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
.....|.|+|| |++..+++++||++.++|.++........|++|...
T Consensus 93 ---~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 93 ---PQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp ---CTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred ---CCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 23689999999 999999999999999999999643333456776544
No 27
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=9.8e-18 Score=151.49 Aligned_cols=122 Identities=16% Similarity=0.245 Sum_probs=101.3
Q ss_pred ccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecC
Q 007848 187 CGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVG 265 (587)
Q Consensus 187 ~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~ 265 (587)
+|+|.+++.+.+..+.+.+.+++|++|+.+|..|.+||||++++.++ +.....+||+++++++||+||| |.|.+..-.
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~ 80 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYK-DKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK 80 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEET-TEEEEEEECCCCSSCSSCEEEEEEEEECCGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeC-CCccceEeCccccCCCCCcCcceEEEECChhh
Confidence 69999999999999999999999999999999999999999999764 4456689999999999999998 666653211
Q ss_pred CCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 266 SKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 266 ~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
-....|.|+|||++..+++++||++.+++.++.. +...|++++.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~ 124 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG--EVKHWKDMIA 124 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHH--HHHHHHHHHH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCCh--HHHHHHHHHh
Confidence 1136899999999999999999999999998643 3344556554
No 28
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.70 E-value=1.2e-17 Score=156.35 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=101.5
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|+|.+++.+.+..+.+.+.+++|++|+.+|.+|.+||||++++..+ +....++||+++++++||+||| |.|.+..
T Consensus 21 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 99 (166)
T 2cm5_A 21 EERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPD-MGKKAKHKTQIKKKTLNPEFNEEFFYDIKH 99 (166)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECC-CCccceEeCCcccCCCCCcccceEEEEcch
Confidence 5679999999999999999999999999999999999999999999763 3335689999999999999998 7776642
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
-......|.|+|||++..+++++||++.+++.++.. ....|++|++
T Consensus 100 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~--~~~~W~~l~~ 145 (166)
T 2cm5_A 100 SDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGE--RLKHWYECLK 145 (166)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHH--HHHHHHHHHH
T ss_pred HhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCc--hhHHHHHHHh
Confidence 111256899999999999999999999999998743 3334555554
No 29
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.70 E-value=1.5e-16 Score=142.89 Aligned_cols=121 Identities=21% Similarity=0.376 Sum_probs=94.1
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQ 125 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~~ 125 (587)
.++.++ ++|++|+++|..|++||||+|++... + ..+||+++++|+||.|+|.|.|.+... +.|+|+|||+|..
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~-~---~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~ 78 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS-G---QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT-C---CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGT
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC-C---ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCC
Confidence 456666 68999999999999999999999642 2 589999999999999999999887654 3599999999975
Q ss_pred ccccccccccccc---cccccceeeecchhh-ccCCeeEEEEccccccccccccccCCCCCCCCcccEEEeecc
Q 007848 126 FHNVDVKTLKLVE---QQFLGEATCTLSQIV-TRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAE 195 (587)
Q Consensus 126 ~~~~~~~~~~l~~---~d~LG~~~i~L~~l~-~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~ 195 (587)
++ ++|||++.+++.++. .......|++|.. +.+....+..|+|++++.
T Consensus 79 -----------~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~-----------~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 79 -----------HKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK-----------LNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp -----------TSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBC-----------SSTTCCCCCCSEEEEEEE
T ss_pred -----------CCCCCCCceEEEEEeHHHhhcccccCcEEEeeee-----------cCCCCCCceeEEEEEEEE
Confidence 44 799999999999983 3344457888864 111002245899988753
No 30
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.70 E-value=7e-17 Score=146.02 Aligned_cols=113 Identities=13% Similarity=0.245 Sum_probs=93.5
Q ss_pred cEEEEE-EEEeCCCCCCCCCC-----------CCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeE
Q 007848 47 SQIELS-FSAADLRDRDVLSK-----------SDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQT 114 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gk-----------sDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~ 114 (587)
..++++ ++|++|+++|..++ +||||+|++.. + ..+||+++++|+||.|+|.|.|.+... +.
T Consensus 6 g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~---~--~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~ 78 (136)
T 1gmi_A 6 GLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDD---S--RIGQTATKQKTNSPAWHDEFVTDVCNG--RK 78 (136)
T ss_dssp EEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETT---E--EEEECCCCSSCSSCEEEEEEEEEEEEE--CE
T ss_pred eEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECC---e--EeeeeeEECCCcCCccCCEEEEEecCC--CE
Confidence 567777 58999999997665 99999999843 2 578999999999999999999987643 79
Q ss_pred EEEEEEEcCCCccccccccccccccccccceeeecchhhccCC--eeEEEEccccccccccccccCCCCCCCCcccEEEe
Q 007848 115 LVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN--RSLTLDLVRREETITPITEESNPSNRPKHCGKLTV 192 (587)
Q Consensus 115 L~~~V~D~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~--~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l 192 (587)
|+|+|||+|.. +++++||++.++|.++..... ...|++|.+ .|+|++
T Consensus 79 L~~~V~d~d~~-----------~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------------------~G~i~l 127 (136)
T 1gmi_A 79 IELAVFHDAPI-----------GYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------------------EGKVYV 127 (136)
T ss_dssp EEEEEEECCSS-----------SSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------------------SCEEEE
T ss_pred EEEEEEeCCCC-----------CCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------------------CeEEEE
Confidence 99999999975 789999999999999987543 267888843 588888
Q ss_pred eccee
Q 007848 193 HAEEC 197 (587)
Q Consensus 193 ~~~~~ 197 (587)
++++.
T Consensus 128 ~l~~~ 132 (136)
T 1gmi_A 128 IIDLS 132 (136)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 31
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.69 E-value=6.4e-17 Score=149.21 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=95.8
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
...|+|.+++++.+..+.+.+.+++|++|+.+|.+|++||||++++.. ++.....+||+++++++||+||| |.|.+..
T Consensus 14 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 14 SGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYH-AKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp --CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEE-TTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred ccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEe-CCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 467999999999999999999999999999999999999999999977 45556689999999999999998 7776542
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
-.-....|.|+|||++..+++++||++.+++.+. ..+...|++++.
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~--~~~~~~W~~l~~ 138 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATAE--GSGGGHWKEICD 138 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCC--SHHHHHHHHHHH
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC--chHHHHHHHHHh
Confidence 1112468999999999999999999999999883 223334555554
No 32
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=6.3e-17 Score=148.20 Aligned_cols=125 Identities=17% Similarity=0.316 Sum_probs=99.0
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcC-CC------CCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCK-DL------FSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS- 256 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~-d~------~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne- 256 (587)
...|+|.+++.+.+..+.+.+.+++|++|+.+ |. ++.+||||++++..+.. .++||+++++++||+|||
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~ 86 (147)
T 2enp_A 10 YQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK---NSKQTGVKRKTQKPVFEER 86 (147)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS---SCEECCCCCSCSSCCCCBC
T ss_pred CcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC---cceEeecccCCCCCeEeee
Confidence 56899999999999999999999999999984 43 46899999999976322 378999999999999998
Q ss_pred ceEEeeecCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeeccc
Q 007848 257 VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (587)
Q Consensus 257 f~~~~~~l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~~ 313 (587)
|.|.+..-......|.|+|||++..+++++||++.++|.++.... ...+|..+.++
T Consensus 87 f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~~w~~L~~~ 142 (147)
T 2enp_A 87 YTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVK-GGHWWKALIPS 142 (147)
T ss_dssp CEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTT-CCCEEECCBCC
T ss_pred EEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCC-CccEEEEeecC
Confidence 776653210013689999999999999999999999999996422 23344444443
No 33
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=1.3e-17 Score=151.65 Aligned_cols=123 Identities=18% Similarity=0.279 Sum_probs=100.1
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCce--------eeEEecceecCCCCCceee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTH--------IPVCKTEVLKNETKPTWKS 256 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~--------~~~~kT~vik~tlnP~Wne 256 (587)
..+|+|.+++.+. .+.+.+.+++|++|+.+|.+|.+||||++++....++. ...+||+++++++||+|||
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 4579999999886 67899999999999999999999999999997643321 2368999999999999998
Q ss_pred -ceEE-e--eecCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 257 -VFLN-I--QQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 257 -f~~~-~--~~l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
|.|. + +.+ ....|.|+|||++..+++++||++.+++.++........|++|..
T Consensus 82 ~f~f~~v~~~~l--~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 82 TVIYKSISMEQL--MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEECSCCHHHH--TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEECCcCHHHc--cCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 6654 2 222 257899999999999999999999999999975444556776643
No 34
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.69 E-value=1.3e-16 Score=147.71 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=85.9
Q ss_pred ccEEEEE-EEEeCCCCCCCC----------CCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeE
Q 007848 46 FSQIELS-FSAADLRDRDVL----------SKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQT 114 (587)
Q Consensus 46 ~~~ieL~-v~arnL~~~D~~----------gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~ 114 (587)
...+.++ ++|+||+++|.. |.+||||+|++.+ + .++||+++++|+||.|||.|.|.+.. .+.
T Consensus 28 ~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~---~--~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~ 100 (157)
T 2fk9_A 28 NGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ---V--RVGQTSTKQKTNKPTYNEEFCANVTD--GGH 100 (157)
T ss_dssp EEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT---E--EEEECCCCSSCSSCEEEEEEEEEEEE--ECE
T ss_pred ccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC---E--eeEEeeecCCCCCCccCcEEEEEcCC--CCE
Confidence 3567777 689999999943 6799999999953 2 46899999999999999999998753 469
Q ss_pred EEEEEEEcCCCccccccccccccccccccceeeecchhhcc----CCeeEEEEccc
Q 007848 115 LVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTR----KNRSLTLDLVR 166 (587)
Q Consensus 115 L~~~V~D~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~----~~~~l~~~L~~ 166 (587)
|.|+|||+|.. +++|+||++.++|.++... .....|++|.+
T Consensus 101 L~~~V~D~d~~-----------~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~ 145 (157)
T 2fk9_A 101 LELAVFHETPL-----------GYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP 145 (157)
T ss_dssp EEEEEEECCSS-----------SSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS
T ss_pred EEEEEEECCCC-----------CCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC
Confidence 99999999975 7899999999999999865 44568999953
No 35
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.69 E-value=1.5e-16 Score=150.34 Aligned_cols=124 Identities=15% Similarity=0.334 Sum_probs=90.2
Q ss_pred cccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEe
Q 007848 199 NSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFN 277 (587)
Q Consensus 199 ~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D 277 (587)
..+.+.|.+++|++|+.+|.+|++||||++++....+++..++||+++++++||+||+ |.|.+. .....|.|+|||
T Consensus 6 ~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~---~~~~~L~~~V~d 82 (176)
T 3m7f_B 6 DTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL---PQRHRILFEVFD 82 (176)
T ss_dssp TCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC---TTTCEEEEEEEE
T ss_pred CcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc---CCCCEEEEEEEE
Confidence 3566788899999999999999999999999986545556789999999999999998 777664 335789999999
Q ss_pred ccCCCCCceeEEEEEechhhhhccCC--C----ceeEeecccccCCCCcccccccEEEe
Q 007848 278 FNSNGKHDLIGKVQKSLADLEKLHSS--G----QGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 278 ~d~~~~dd~IG~~~i~l~~l~~~~~~--~----~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
++..+++++||++.++|.++...... . .|+.|.....++ +. .|.|+|.
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~----~~-~G~l~l~ 136 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS----RV-KGYLRLK 136 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC----CC-CSEEEEE
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC----cc-CEEEEEE
Confidence 99999999999999999999642221 0 355554332211 22 8999984
No 36
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.68 E-value=4.8e-17 Score=150.74 Aligned_cols=108 Identities=13% Similarity=0.107 Sum_probs=89.7
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.+. ++|+||+++|..|++||||++++.+.++....+.||+++++|+||+|+|+|.|.+..+. ...|+|+|||+|
T Consensus 43 ~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d 122 (155)
T 2z0u_A 43 KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTD 122 (155)
T ss_dssp TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECC
Confidence 344454 78999999999999999999999863333335899999999999999999999876543 358999999999
Q ss_pred CCccccccccccccccccccceeeecchhhc-cCCeeEEEEcc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVT-RKNRSLTLDLV 165 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~-~~~~~l~~~L~ 165 (587)
.. +++++||++.++|.++.. ......|++|.
T Consensus 123 ~~-----------~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 123 RS-----------HLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp TT-----------SCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CC-----------CCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 76 789999999999999953 45667899884
No 37
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.68 E-value=1.5e-16 Score=143.57 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=90.9
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEE-eecC--ceeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~-~~~e--~~q~L~~~V~D~ 122 (587)
..+.+. ++|+||+. |..|++||||+|++.+ ++......||+++++|+||.|+|+|.|. +..+ ....|+|+|||+
T Consensus 20 ~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~ 97 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-EDGADPNPYVKTYLLP-DTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSA 97 (134)
T ss_dssp TEEEEEEEEEECCCC-TTSCCCCEEEEEEEES-CSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEc-CCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEEC
Confidence 557776 58999997 8889999999999976 3333468999999999999999999998 7654 336999999999
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|.. +++++||++.++|.++........|++|.+
T Consensus 98 d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 98 ESL-----------RENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CSS-----------SCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCC-----------CCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 975 789999999999999987767778999965
No 38
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.68 E-value=1.2e-16 Score=148.39 Aligned_cols=111 Identities=20% Similarity=0.327 Sum_probs=96.1
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|+|.+++.+.+..+.+.+.+++|++|+.+|.+|.+||||++++.. ++.....+||+++++++||+||| |.|.+..
T Consensus 9 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 9 EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQ-NGKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp GCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEe-CCceeceeeCceecCCCCCcccceEEEEcCH
Confidence 457999999999999999999999999999999999999999999976 35556789999999999999998 6666532
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechh
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLAD 296 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~ 296 (587)
-......|.|+|||++..+++++||++.+++..
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~ 120 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNS 120 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTC
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCC
Confidence 111146799999999999999999999999984
No 39
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=144.93 Aligned_cols=118 Identities=20% Similarity=0.274 Sum_probs=92.1
Q ss_pred ccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeec-CCCCCcEEEEEEe
Q 007848 200 SKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV-GSKDSPLIIECFN 277 (587)
Q Consensus 200 ~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l-~~~~~~L~i~V~D 277 (587)
.+.+.+.+++|++|+.+|. +.+||||++++..+ .+||+++++++||+||| |.|.+..- .+....|.|+|||
T Consensus 6 ~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~------~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDE------KKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSC------EEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCE------eEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 4567788999999999999 99999999999542 68999999999999998 77776421 1246899999999
Q ss_pred ccCCCCCceeEEEEEechhhhhccCCCceeE---eecccccCCCCcccccccEEEe
Q 007848 278 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQN---LFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 278 ~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~---l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
++..+++++||++.+++.+|........|+. +.++.+ .+ ..|+|+|.
T Consensus 79 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~-----~~-~~G~l~l~ 128 (140)
T 2dmh_A 79 FETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKG-----QD-TGATIDLV 128 (140)
T ss_dssp TTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTC-----CE-EEEEEEEE
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCC-----CC-CCCEEEEE
Confidence 9999999999999999999965333334565 433221 11 27999883
No 40
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.67 E-value=1.1e-16 Score=144.54 Aligned_cols=119 Identities=13% Similarity=0.183 Sum_probs=92.1
Q ss_pred cEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEE-eeecC
Q 007848 188 GKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-IQQVG 265 (587)
Q Consensus 188 G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~-~~~l~ 265 (587)
+.+.+...+ ..+.+.+.+++|++|+. +..|.+||||++++.. ++....++||+++++++||+||| |.|. +..-.
T Consensus 9 ~~~~~~~~~--~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~ 84 (134)
T 2b3r_A 9 GAVKLSVSY--RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLP-DTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKET 84 (134)
T ss_dssp CEEEEEEEE--ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEES-CSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHH
T ss_pred EEEEEEEee--cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEc-CCCCCceecCCcCcCCCCCCCccEEEECCcCHHH
Confidence 444444433 56789999999999997 8889999999999975 34445689999999999999998 6666 43111
Q ss_pred CCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEee
Q 007848 266 SKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLF 310 (587)
Q Consensus 266 ~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~ 310 (587)
.....|.|+|||++..+++++||++.+++.++........|++|.
T Consensus 85 l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 85 LRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred hCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 125799999999999999999999999999996433333566654
No 41
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.67 E-value=3.7e-16 Score=147.42 Aligned_cols=120 Identities=21% Similarity=0.303 Sum_probs=94.6
Q ss_pred ccEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCC
Q 007848 46 FSQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (587)
Q Consensus 46 ~~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~ 124 (587)
..++.++ ++|++|++++..+++||||+|++.+ ++.||+++++|+||+|+|.|.|.+. ..+.|+|+|||+|.
T Consensus 35 ~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~------~~~kT~v~~~tlnP~Wne~f~f~v~--~~~~L~~~V~D~d~ 106 (173)
T 2nq3_A 35 KSQLQITVISAKLKENKKNWFGPSPYVEVTVDG------QSKKTEKCNNTNSPKWKQPLTVIVT--PVSKLHFRVWSHQT 106 (173)
T ss_dssp CEEEEEEEEEEEECCCC--CCCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEEC--TTCEEEEEEEECCS
T ss_pred ceEEEEEEEEeECCCCcccCCCCCeEEEEEECC------EEeEccccCCCCCCeECCEEEEEeC--CCCEEEEEEEECCC
Confidence 3667777 6899999555456699999999953 6999999999999999999999874 36799999999997
Q ss_pred CccccccccccccccccccceeeecchhhccCC-----eeEEEEccccccccccccccCCCCCCCCcccEEEeeccee
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN-----RSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~-----~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~ 197 (587)
. +++++||++.++|.++..... ...|++|.. ..+ .....|+|.+.++++
T Consensus 107 ~-----------~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~-----------~~~--~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 107 L-----------KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGG-----------DKE--PTETIGDLSICLDGL 160 (173)
T ss_dssp S-----------SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEE-----------SSC--TTSEEEEEEEEEESE
T ss_pred C-----------CCCceEEEEEEEHHHhcccCCCCcceeEEEEECcc-----------CCC--CCcccEEEEEEEeee
Confidence 5 789999999999999875432 256888865 211 235689999887765
No 42
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.66 E-value=3e-16 Score=143.78 Aligned_cols=115 Identities=13% Similarity=0.249 Sum_probs=91.9
Q ss_pred ccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEec
Q 007848 200 SKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNF 278 (587)
Q Consensus 200 ~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~ 278 (587)
.+.+.+.+++|++|+.+|.+|.+||||++++.. ..+||+++++++||.||+ |.|.+. .....|.|+|||+
T Consensus 16 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~---~~~~~l~~~v~d~ 86 (148)
T 3kwu_A 16 SAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK------TKKRTKTIYGNLNPVWEENFHFECH---NSSDRIKVRVLDE 86 (148)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCCSCSSCEEEEEEEEEEC---STTCEEEEEEEEC
T ss_pred ccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC------EEEECCccCCCCCCCcccEEEEEec---CCCCEEEEEEEEC
Confidence 467888999999999999999999999999932 378999999999999998 777664 2357899999999
Q ss_pred cCC-----------CCCceeEEEEEechhhhhccCCCceeEeecccccCCCCcccccccEEEe
Q 007848 279 NSN-----------GKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 279 d~~-----------~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
+.. +++++||++.+++.++. .....|++|....... +. .|.|+|.
T Consensus 87 d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~----~~-~G~i~l~ 142 (148)
T 3kwu_A 87 DDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS----AV-SGAIRLH 142 (148)
T ss_dssp CCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC----CC-CCEEEEE
T ss_pred CCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC----CC-ceEEEEE
Confidence 986 78999999999999993 3334566665332211 12 8999984
No 43
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.66 E-value=6.9e-16 Score=138.62 Aligned_cols=119 Identities=21% Similarity=0.291 Sum_probs=91.0
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEecc
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d 279 (587)
..+.+.+++|++|+.+|.+|++||||++++... ..++||+++++++||+||| |.|.+.. ...|.|+|||++
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~----~~~~kT~v~~~t~nP~wne~f~f~v~~----~~~l~~~v~d~d 76 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS----GQCHSTDTVKNTLDPKWNQHYDLYVGK----TDSITISVWNHK 76 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCCCCEEEEEEETTT----CCEEECCCCSSCSSCEEEEEEEEEEET----TCCEEEEEEEGG
T ss_pred EEEEEEEEEeECCCCCCCCCCcCeEEEEEECCC----CceEECCccCCCCCCCccCEEEEEeCC----CCEEEEEEEECC
Confidence 457788999999999999999999999998432 2478999999999999998 7776652 245999999999
Q ss_pred CCCC---CceeEEEEEechhhhhccC-CCceeEeecccccCCCCcccccccEEEe
Q 007848 280 SNGK---HDLIGKVQKSLADLEKLHS-SGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 280 ~~~~---dd~IG~~~i~l~~l~~~~~-~~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
..++ +++||++.+++.++..... ...+++|..... .+..+. .|+|+|.
T Consensus 77 ~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~--~~~~~~-~G~i~v~ 128 (132)
T 3pyc_A 77 KIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNP--SDTDAV-RGQIVVS 128 (132)
T ss_dssp GTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSST--TCCCCC-CSEEEEE
T ss_pred CCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCC--CCCCce-eEEEEEE
Confidence 9876 7999999999999954332 234555543211 112223 8999984
No 44
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.66 E-value=4.5e-16 Score=140.40 Aligned_cols=107 Identities=20% Similarity=0.289 Sum_probs=91.1
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecC-ceeEEEEEEEEcCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDT 124 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e-~~q~L~~~V~D~D~ 124 (587)
..+.+. ++|++|+++|..|++||||+|++.+ ++......||+++++++||.|+|.|.|.+... ..+.|+|+|||+|.
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIP-DPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEC-CTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEc-CCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 557776 5999999999999999999999975 22234689999999999999999999987654 33589999999997
Q ss_pred CccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
. +++++||++.++|.++...+ ...|++|.+
T Consensus 95 ~-----------~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 95 T-----------TRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp S-----------SCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred C-----------CCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 5 78999999999999998765 778999965
No 45
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.66 E-value=2.5e-16 Score=143.47 Aligned_cols=106 Identities=23% Similarity=0.313 Sum_probs=90.9
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.++ ++|++|+.+|..+++||||+|++.+... ...||+++++|+||.|+|+|.|.+..+. ...|+|+|||+|
T Consensus 34 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 34 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCS---CCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCC---ccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 445555 6899999999999999999999976333 4899999999999999999998876543 269999999999
Q ss_pred CCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
.. +++++||++.++|.++........|++|.+
T Consensus 111 ~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 RF-----------SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SS-----------SCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CC-----------CCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 75 789999999999999987777889999964
No 46
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=4.5e-16 Score=142.92 Aligned_cols=107 Identities=20% Similarity=0.243 Sum_probs=91.2
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecC-ceeEEEEEEEEcCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDT 124 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e-~~q~L~~~V~D~D~ 124 (587)
.++.++ ++|++|+++|..+++||||+|++.+ ++......||+++++++||.|+|+|.|.+..+ ..+.|+|+|||+|.
T Consensus 31 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 31 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SEEEEEEEEEESCCCCSTTSCCCEEEEEEEES-CTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCCCCCCCcCeEEEEEEEC-CCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 457777 5999999999999999999999986 33334689999999999999999999987654 24689999999997
Q ss_pred CccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
. +++++||++.++|.++... ....|++|.+
T Consensus 110 ~-----------~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 110 T-----------SRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp S-----------SCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred C-----------CCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 5 7899999999999999865 3668999965
No 47
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.65 E-value=3e-16 Score=143.89 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=92.1
Q ss_pred cEEEEE-EEEeCCCCCC-CCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDRD-VLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D-~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~ 122 (587)
..+.+. ++|+||+++| ..+++||||+|++.+ ++.+....||+++++|+||.|+|+|.|.+..+. ...|+|+|||+
T Consensus 23 ~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~ 101 (148)
T 3fdw_A 23 QSLVVHVKECHQLAYADEAKKRSNPYVKTYLLP-DKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHH 101 (148)
T ss_dssp TEEEEEEEEEESCCCSBTTTTBCCEEEEEEEET-CCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEE
T ss_pred CEEEEEEEEecCCCCcccCCCCCCeEEEEEEEc-CCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEEC
Confidence 456665 6899999999 689999999999986 333346899999999999999999999877654 34799999999
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|.. +++++||++.++|.++........|++|.+
T Consensus 102 d~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 102 GRF-----------GRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp CGG-----------GCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred CCC-----------cCCcEEEEEEEEcccccccCCccceEECcC
Confidence 965 789999999999999987777789999976
No 48
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.65 E-value=4.6e-16 Score=141.51 Aligned_cols=108 Identities=21% Similarity=0.313 Sum_probs=91.5
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEE-eecCc--eeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFEV--VQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~-~~~e~--~q~L~~~V~D~ 122 (587)
..+.++ ++|++|+++|..|++||||+|++.+ ++.+....||+++++++||.|+|+|.|. +..+. ...|+|+|||+
T Consensus 29 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 107 (142)
T 2chd_A 29 SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLP-GASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDE 107 (142)
T ss_dssp TEEEEEEEEEESCCCCCTTSCCCEEEEEEEES-CCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEE
T ss_pred CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEc-CCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEEC
Confidence 456666 6899999999999999999999986 3333469999999999999999999987 54433 26899999999
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|.. +++++||++.++|.++........|++|..
T Consensus 108 d~~-----------~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 108 DKF-----------GHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp CTT-----------SCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCC-----------CCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 975 789999999999999988877888888864
No 49
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=4.4e-16 Score=139.09 Aligned_cols=106 Identities=23% Similarity=0.327 Sum_probs=85.0
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEe-ecC--ceeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITY-QFE--VVQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~-~~e--~~q~L~~~V~D~ 122 (587)
..+.++ ++|+||+++|..|++||||+|++.+ ++......||+++++|+||.|+|+|.|.+ ..+ ..+.|+|+|||+
T Consensus 18 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~ 96 (129)
T 2bwq_A 18 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 96 (129)
T ss_dssp TEEEEEEEEEESCCCCTTSCCBCEEEEEEEES-SCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEec-CCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEEC
Confidence 457776 5999999999999999999999976 23234699999999999999999999984 333 346999999999
Q ss_pred CCCccccccccccccc--cccccceeeecchhhccCCeeEEEEcc
Q 007848 123 DTQFHNVDVKTLKLVE--QQFLGEATCTLSQIVTRKNRSLTLDLV 165 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~--~d~LG~~~i~L~~l~~~~~~~l~~~L~ 165 (587)
|.. ++ +++||++.++|.++.... ...|++|+
T Consensus 97 d~~-----------~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 97 ARV-----------REEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp ------------------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred CcC-----------cCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 975 55 899999999999987654 67899883
No 50
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=5.4e-16 Score=142.90 Aligned_cols=106 Identities=23% Similarity=0.313 Sum_probs=90.3
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.++ ++|+||+.+|..+++||||+|++.+..+ ...||+++++++||.|+|.|.|.+..+. ...|+|+|||+|
T Consensus 42 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 118 (152)
T 1rsy_A 42 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 118 (152)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCC---ceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECC
Confidence 445555 6899999999999999999999986322 4889999999999999999999876542 368999999999
Q ss_pred CCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
.. +++++||++.++|.++........|++|.+
T Consensus 119 ~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 119 RF-----------SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp SS-----------SCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CC-----------CCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 75 789999999999999977666778999965
No 51
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=4.8e-16 Score=141.27 Aligned_cols=106 Identities=23% Similarity=0.385 Sum_probs=90.0
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEe-ecC--ceeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITY-QFE--VVQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~-~~e--~~q~L~~~V~D~ 122 (587)
..+.++ ++|++|+.+|..+++||||+|++.++.. ...||+++++++||.|+|.|.|.. ..+ ....|+|+|||+
T Consensus 26 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 102 (141)
T 2d8k_A 26 STLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKK---HKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDY 102 (141)
T ss_dssp CCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCS---SEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEEC
T ss_pred CEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCC---ccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEEC
Confidence 456666 6899999999999999999999976322 488999999999999999999874 322 236899999999
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|.. +++++||++.++|.++........|++|.+
T Consensus 103 d~~-----------~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 103 DRF-----------SRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp CSS-----------SSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred CCC-----------CCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 975 789999999999999988777789999976
No 52
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.65 E-value=5.8e-16 Score=145.77 Aligned_cols=107 Identities=19% Similarity=0.258 Sum_probs=91.5
Q ss_pred cEEEEE-EEEeCCCCCCC-CCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEE-EcC
Q 007848 47 SQIELS-FSAADLRDRDV-LSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIY-DVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~-~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~-D~D 123 (587)
..+.++ ++|+||+++|. .|++||||+|++.+ ++.+....||+++++|+||+|+|+|.|.+..+ .+.|+|+|| |+|
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~L~~~V~~d~d 107 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLE-NGACIAKKKTRIARKTLDPLYQQSLVFDESPQ-GKVLQVIVWGDYG 107 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEECSSCCT-TEEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEEC-CCccccceeCccCCCCCCCCCCcEEEEEecCC-CCEEEEEEEEcCC
Confidence 567776 69999999996 79999999999987 45556799999999999999999999887543 479999999 999
Q ss_pred CCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
.. +++++||++.++|.++........|++|..
T Consensus 108 ~~-----------~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~ 139 (171)
T 2q3x_A 108 RM-----------DHKCFMGVAQILLEELDLSSMVIGWYKLFP 139 (171)
T ss_dssp TT-----------CSSEEEEEEEECGGGSCTTSCEEEEEECBC
T ss_pred CC-----------CCCCEEEEEEEEHHHcccCCCcceeEECCC
Confidence 75 789999999999999987667788999976
No 53
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=2.1e-15 Score=153.18 Aligned_cols=139 Identities=14% Similarity=0.275 Sum_probs=108.8
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|+|.+++.+....+.+.+.+++|++|+.+|..|.+||||++++..+.+ ..++|+++++++||+||| |.|.+..
T Consensus 3 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~---~~~~T~~~~~~~nP~wne~f~f~v~~ 79 (284)
T 2r83_A 3 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPY 79 (284)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT---SCEECCCCCSCSSCEEEEEEEECCCG
T ss_pred cceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC---ceEeCCcccCCCCCeeCceEEEEech
Confidence 347999999999999999999999999999999999999999999976432 368999999999999998 6666432
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeecccccCCCCcccccccEEEe
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
-......|.|+|||++..+++++||++.+++.++........|++|..+.+.. ... .|.|.+.
T Consensus 80 ~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~---~~~-~G~i~l~ 142 (284)
T 2r83_A 80 SELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEE---QEK-LGDICFS 142 (284)
T ss_dssp GGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCC---CCC-CCEEEEE
T ss_pred HHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeecccccc---ccc-cccEEEE
Confidence 11125799999999999999999999999999996432223456665433211 112 7888773
No 54
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=1.4e-15 Score=137.70 Aligned_cols=106 Identities=18% Similarity=0.255 Sum_probs=88.4
Q ss_pred cEEEEE-EEEeCCCCCCCC-CCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEE-eecCc--eeEEEEEEEE
Q 007848 47 SQIELS-FSAADLRDRDVL-SKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFEV--VQTLVFRIYD 121 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~-gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~-~~~e~--~q~L~~~V~D 121 (587)
..+.++ ++|+||+++|.. +++||||+|++.++ +. ...||+++++|+||+|+|+|.|. +..+. ...|+|+|||
T Consensus 22 ~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~-~~--~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d 98 (138)
T 1ugk_A 22 KAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE-KK--HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILS 98 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT-TC--SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEE
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC-CC--ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEE
Confidence 456666 699999999996 99999999999863 22 59999999999999999999985 55543 3599999999
Q ss_pred cCCCccccccccccccccccccceeeecchhhccCCe-eEEEEccc
Q 007848 122 VDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNR-SLTLDLVR 166 (587)
Q Consensus 122 ~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~-~l~~~L~~ 166 (587)
+|.. +++++||++.++|.++....+. ..|++|..
T Consensus 99 ~d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 99 FDRF-----------SRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp ECSS-----------CCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred CCCC-----------CCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 9975 7899999999999999776554 46788865
No 55
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.63 E-value=5.7e-16 Score=139.73 Aligned_cols=114 Identities=15% Similarity=0.293 Sum_probs=92.0
Q ss_pred ccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceec-CCCCCceee-ceEEeeecCCCCCcEEEEEEe
Q 007848 200 SKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFN 277 (587)
Q Consensus 200 ~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik-~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D 277 (587)
.+.+.+.+++|++|+.+|.+|.+||||++++..+ .+||++++ +++||+||| |.|.+.. ....|.|+|||
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~------~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d 79 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQ------DQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIFD 79 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSC------EEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEECC
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEECCc------cceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEEE
Confidence 4567788999999999999999999999998542 57999999 899999998 8887763 46799999999
Q ss_pred ccCCCCCceeEEEEEechhhhhcc-CCCceeEeecccccCCCCcccccccEEEe
Q 007848 278 FNSNGKHDLIGKVQKSLADLEKLH-SSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 278 ~d~~~~dd~IG~~~i~l~~l~~~~-~~~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
++..++|++||++.+++.++.... ....|++|. +. + +. .|+|+|.
T Consensus 80 ~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~--~----~~-~G~i~l~ 125 (136)
T 1wfj_A 80 KDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KD--E----EY-KGEIWVA 125 (136)
T ss_dssp SSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ET--T----EE-EEEEEEE
T ss_pred CCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cC--C----cc-CEEEEEE
Confidence 999999999999999999995321 123467765 11 1 12 8999984
No 56
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=6.1e-16 Score=140.27 Aligned_cols=107 Identities=22% Similarity=0.329 Sum_probs=89.2
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEE-eecC--ceeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~-~~~e--~~q~L~~~V~D~ 122 (587)
..+.++ ++|++|+++|..+++||||+|++.+ ++......||+++++|+||.|+|+|.|. +..+ ..+.|+|+|||+
T Consensus 21 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~ 99 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQ 99 (141)
T ss_dssp TEEEEEEEEEESCCCCSSSCCCCEEEECCCSS-CCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEB
T ss_pred CEEEEEEEEccCCCCcCCCCCCCCEEEEEEec-CCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEEC
Confidence 456666 7999999999999999999999865 2223468999999999999999999998 4444 236999999999
Q ss_pred CCCccccccccccccc--cccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVE--QQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~--~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|.. ++ +++||++.++|.++.... ...|++|.+
T Consensus 100 d~~-----------~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 100 ARV-----------REEESEFLGEILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp CSS-----------SSCCBCCCEEEEEEGGGCCCSS-EEEEEECBC
T ss_pred CCC-----------cCCCCceEEEEEEEccccCCCC-CCceEECcc
Confidence 975 55 899999999999987644 778999976
No 57
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.63 E-value=1.5e-16 Score=144.61 Aligned_cols=108 Identities=30% Similarity=0.396 Sum_probs=90.0
Q ss_pred EEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCce--------eeEeeeeeecCCCCCceeeeEEEE-eecC--ceeEE
Q 007848 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGAL--------VEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQTL 115 (587)
Q Consensus 48 ~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~--------~~~~rTevi~~tlNP~w~e~f~~~-~~~e--~~q~L 115 (587)
.+.++ ++|++|+++|..|++||||+|++.+..+++ ....||+++++|+||.|+|.|.|. +..+ ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 45555 699999999999999999999998643321 246899999999999999999986 5543 24699
Q ss_pred EEEEEEcCCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 116 VFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 116 ~~~V~D~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
+|+|||+|.. +++++||++.++|.++........|++|.+
T Consensus 99 ~i~V~d~d~~-----------~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 99 EVTVWDYDRF-----------SSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEECSS-----------SCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEECCCC-----------CCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 9999999975 789999999999999977666779999975
No 58
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.63 E-value=2.4e-15 Score=153.99 Aligned_cols=138 Identities=19% Similarity=0.293 Sum_probs=106.0
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
+.+|+|.+++++....+.+.+.+++|++|+.+|.+|.+||||++++..+ +. ..+||+++++++||+||| |.|.+..
T Consensus 4 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~-~~--~~~kT~v~~~t~nP~wne~f~f~v~~ 80 (296)
T 1dqv_A 4 APCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPD-RK--KKFQTKVHRKTLNPIFNETFQFSVPL 80 (296)
T ss_dssp CSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTS-TT--SCEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcC-CC--eeEeCCccCCCCCCcEeeEEEEEecH
Confidence 5689999999999999999999999999999999999999999998642 32 468999999999999998 6666531
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEe-chhhhhcc-CCCceeEeecccccCCCCcccccccEEEe
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKS-LADLEKLH-SSGQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~-l~~l~~~~-~~~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
-.-....|.|+|||+|..+++++||++.++ +.++.... ....|+.|..... .... .|.|.+.
T Consensus 81 ~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~----~~~~-~G~i~vs 144 (296)
T 1dqv_A 81 AELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGS----EKAD-LGELNFS 144 (296)
T ss_dssp GGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSS----CCSC-CCEEEEE
T ss_pred HHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccc----cccc-cceEEEE
Confidence 111146899999999999999999999995 55654322 2234555543321 1122 7998874
No 59
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=6.5e-16 Score=140.51 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=88.6
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.+. ++|+||+++|..| +||||+|++.+ ++......||+++++|+||.|+|+|.|.+..+. ...|+|+|||+|
T Consensus 24 ~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 101 (142)
T 2dmg_A 24 NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLP-DKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSG 101 (142)
T ss_dssp TEEEEEEEEEECCCCSSTTC-CCEEEEEEEES-CCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEc-CCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECC
Confidence 456676 6999999999999 99999999986 333346899999999999999999999876543 249999999999
Q ss_pred CCcccccccccccc--ccccccceeeecchhhccCCeeEEEEccc
Q 007848 124 TQFHNVDVKTLKLV--EQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 124 ~~~~~~~~~~~~l~--~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
.. + .+++||++.++|.++........|++|.+
T Consensus 102 ~~-----------~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 102 GF-----------LSKDKGLLGKVLVALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp CS-----------SCCSCCCCEEEEEECCCSTTTTCBCCBCCCBC
T ss_pred Cc-----------cccCCcEEEEEEEecccccccccccceeeccC
Confidence 64 3 35799999999999876666678999965
No 60
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.62 E-value=1.3e-15 Score=138.16 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=87.0
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.++ ++|+ ++|..|++||||+|++.+.++ ....||+++++|+||.|+|+|.|.+..+. ...|+|+|||+|
T Consensus 26 ~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~--~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 26 AELFVTRLEAV---TSNHDGGCDCYVQGSVANRTG--SVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTE--EEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCC--cccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 456666 5777 578899999999999976323 25789999999999999999999987654 358999999999
Q ss_pred CCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
.. +++++||++.++|.++........|++|.+
T Consensus 101 ~~-----------~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 101 RF-----------SRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp SS-----------CTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred CC-----------CCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 75 789999999999999976666778999975
No 61
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=9.5e-16 Score=140.34 Aligned_cols=106 Identities=16% Similarity=0.257 Sum_probs=87.9
Q ss_pred cEEEEE-EEEeCCCCC-CC------CCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEE
Q 007848 47 SQIELS-FSAADLRDR-DV------LSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLV 116 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~-D~------~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~ 116 (587)
..+.++ ++|+||+++ |. .+++||||+|++.++.+ ...||+++++++||+|+|+|.|.+..+. ...|+
T Consensus 26 ~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 102 (147)
T 2enp_A 26 NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK---NSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLL 102 (147)
T ss_dssp TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS---SCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEE
T ss_pred CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC---cceEeecccCCCCCeEeeeEEEEeChHHhccCEEE
Confidence 456776 699999984 43 46899999999986332 4789999999999999999999876543 24899
Q ss_pred EEEEEcCCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 117 FRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 117 ~~V~D~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|+|||+|.. +++++||++.++|.++........|++|.+
T Consensus 103 ~~V~d~d~~-----------~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 103 LTVVDFDKF-----------SRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEECCSTT-----------CCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEECCCC-----------cCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 999999975 789999999999999987766778999865
No 62
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.62 E-value=1.9e-15 Score=139.45 Aligned_cols=107 Identities=15% Similarity=0.218 Sum_probs=87.8
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCce-eEEEEEEEEcCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV-QTLVFRIYDVDT 124 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~-q~L~~~V~D~D~ 124 (587)
..+.++ ++|+||+++| .|++||||+|++.+. +......||+++++|+||.|+|+|.|.+..+.. ..|+|+|||+|.
T Consensus 27 ~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 104 (153)
T 3fbk_A 27 RVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPE-DSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS 104 (153)
T ss_dssp SEEEEEEEEEESCCCCS-SSCCCEEEEEEEESC-SCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcC-CCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC
Confidence 456665 6899999999 699999999999762 223368999999999999999999998754332 579999999997
Q ss_pred Cccccccccccccc-cccccceeeecchhhc-cCCeeEEEEccc
Q 007848 125 QFHNVDVKTLKLVE-QQFLGEATCTLSQIVT-RKNRSLTLDLVR 166 (587)
Q Consensus 125 ~~~~~~~~~~~l~~-~d~LG~~~i~L~~l~~-~~~~~l~~~L~~ 166 (587)
. ++ +++||++.++|.++.. ......|++|.+
T Consensus 105 ~-----------~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 105 Q-----------SRQSGLIGCMSFGVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp S-----------GGGCEEEEEEEEEHHHHTC--CCEEEEEECBC
T ss_pred C-----------CCCCcEEEEEEEEHHHhcCCCCccccEEECCC
Confidence 5 55 8999999999999984 556678999976
No 63
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.61 E-value=8.3e-16 Score=142.38 Aligned_cols=92 Identities=17% Similarity=0.215 Sum_probs=78.6
Q ss_pred cccccceeeeccccCCcCCCC----------CCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCC
Q 007848 199 NSKTTTELILRCSDLDCKDLF----------SRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSK 267 (587)
Q Consensus 199 ~~~~l~v~vi~a~~L~~~d~~----------g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~ 267 (587)
..+.+.+.+++|++|+.+|.. |.+||||++.+. + ..+.||+++++|+||+||| |.|.+..
T Consensus 27 ~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~---~--~~~~kT~v~~ktlnP~WNE~F~f~v~~---- 97 (157)
T 2fk9_A 27 FNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVD---Q--VRVGQTSTKQKTNKPTYNEEFCANVTD---- 97 (157)
T ss_dssp EEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEET---T--EEEEECCCCSSCSSCEEEEEEEEEEEE----
T ss_pred CccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEEC---C--EeeEEeeecCCCCCCccCcEEEEEcCC----
Confidence 356788899999999999832 579999999983 2 2467999999999999998 8777653
Q ss_pred CCcEEEEEEeccCCCCCceeEEEEEechhhhh
Q 007848 268 DSPLIIECFNFNSNGKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 268 ~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~ 299 (587)
...|.|+|||++..+++++||.+.+++.++..
T Consensus 98 ~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~ 129 (157)
T 2fk9_A 98 GGHLELAVFHETPLGYDHFVANCTLQFQELLR 129 (157)
T ss_dssp ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhc
Confidence 36899999999999999999999999999975
No 64
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.61 E-value=3.1e-15 Score=134.94 Aligned_cols=94 Identities=20% Similarity=0.291 Sum_probs=81.1
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCce--eEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~--q~L~~~V~D~D 123 (587)
..+.+. ++|++|+.+|..|++||||+|++.+ .+......||+++++++||.|+|.|.|.+..+.. ..|+|+|||+|
T Consensus 16 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~ 94 (138)
T 3n5a_A 16 NSIIVNIIKARNLKAMDIGGTSDPYVKVWLMY-KDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKD 94 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTBCCEEEEEEEEE-TTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECC
T ss_pred CeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEe-CCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECC
Confidence 456666 6899999999999999999999986 3445679999999999999999999998776553 68999999999
Q ss_pred CCccccccccccccccccccceeeecchh
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQI 152 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l 152 (587)
.. +++++||++.++|.++
T Consensus 95 ~~-----------~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 95 KL-----------SRNDVIGKIYLSWKSG 112 (138)
T ss_dssp SS-----------SCCEEEEEEEESSSSC
T ss_pred CC-----------CCCcEEEEEEEccccC
Confidence 75 7899999999999853
No 65
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.61 E-value=3.5e-15 Score=138.48 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=89.2
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.++ ++|+||+++|..|++||||+|++.+ ++......||+++++|+||.|+|+|.|.+..+. ...|+|+|||+|
T Consensus 25 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d 103 (159)
T 1tjx_A 25 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQ-NGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYD 103 (159)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CEEEEEEEEeeCCCCccCCCCCCeEEEEEEEe-CCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECC
Confidence 456666 6899999999999999999999986 344557899999999999999999999987654 358999999999
Q ss_pred CCccccccccccccccccccceeeecch----------hhccC--CeeEEEEccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQ----------IVTRK--NRSLTLDLVR 166 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~----------l~~~~--~~~l~~~L~~ 166 (587)
.. +++++||++.++|.. +...+ ....|++|..
T Consensus 104 ~~-----------~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 104 KI-----------GKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp SS-----------SCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CC-----------CCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 75 789999999999984 44333 3457999965
No 66
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.61 E-value=6.4e-16 Score=137.43 Aligned_cols=103 Identities=14% Similarity=0.235 Sum_probs=81.8
Q ss_pred cccceeeeccccCCcC---CCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEE
Q 007848 201 KTTTELILRCSDLDCK---DLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECF 276 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~---d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~ 276 (587)
+.+.+.+++|++|+.+ |.+|++||||++++.+.. ...+||+++++++||+||| |.|.+.. .....|.|+||
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~~l~i~V~ 77 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP---DSRKRTRHFNNDINPVWNETFEFILDP--NQENVLEITLM 77 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST---TCCEECCCCTTCSSCEEEEEEEEEECT--TSCCEEEEEEE
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC---CceEEccccCCCCCCcccceEEEEecC--CCCCEEEEEEE
Confidence 4678889999999984 778999999999995421 2478999999999999998 7777642 33678999999
Q ss_pred eccCCCCCceeEEEEEechhhhhccCCCceeEe
Q 007848 277 NFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNL 309 (587)
Q Consensus 277 D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l 309 (587)
|++..+ +++||++.++|.+|........|++|
T Consensus 78 d~d~~~-~~~iG~~~i~l~~l~~~~~~~~~~~L 109 (126)
T 1rlw_A 78 DANYVM-DETLGTATFTVSSMKVGEKKEVPFIF 109 (126)
T ss_dssp ECCSSC-CEEEEEEEEEGGGSCTTCEEEEEEEE
T ss_pred ECCCCC-CceeEEEEEEHHHccCCCcEEEEEEc
Confidence 999874 89999999999999642222234444
No 67
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.61 E-value=2.8e-15 Score=138.09 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=74.8
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCce--eEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~--q~L~~~V~D~D 123 (587)
..+.+. ++|+||+.+|..|++||||+|++.+ ++......||+++++|+||.|+|+|.|.+..+.. ..|+|+|||+|
T Consensus 30 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d 108 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYH-AKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSE 108 (153)
T ss_dssp TEEEEEEEEEESCC------CCCEEEEEEEEE-TTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEe-CCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCC
Confidence 456665 6899999999999999999999986 4555568899999999999999999999776543 68999999999
Q ss_pred CCccccccccccccccccccceeeecch
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQ 151 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~ 151 (587)
.. +++++||++.++|.+
T Consensus 109 ~~-----------~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 109 RG-----------SRNEVIGRLVLGATA 125 (153)
T ss_dssp TT-----------SCCEEEEEEEESTTC
T ss_pred CC-----------CCCcEEEEEEECCCC
Confidence 75 789999999999987
No 68
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.60 E-value=4.9e-15 Score=139.70 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=88.5
Q ss_pred cccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEe
Q 007848 199 NSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFN 277 (587)
Q Consensus 199 ~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D 277 (587)
....+.+.+++|++|+..+.++.+||||++++. + .++||+++++++||+||| |.|.+. ....|.|+|||
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~---~---~~~kT~v~~~tlnP~Wne~f~f~v~----~~~~L~~~V~D 103 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVD---G---QSKKTEKCNNTNSPKWKQPLTVIVT----PVSKLHFRVWS 103 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEET---T---EEEECCCCSSCSSCEEEEEEEEEEC----TTCEEEEEEEE
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEEC---C---EEeEccccCCCCCCeECCEEEEEeC----CCCEEEEEEEE
Confidence 345688899999999955544559999999983 3 488999999999999998 777764 27899999999
Q ss_pred ccCCCCCceeEEEEEechhhhhccCC-----CceeEeecccccCCCCcccccccEEEe
Q 007848 278 FNSNGKHDLIGKVQKSLADLEKLHSS-----GQGQNLFLSTAAGNNNHKILNSQLFVD 330 (587)
Q Consensus 278 ~d~~~~dd~IG~~~i~l~~l~~~~~~-----~~~~~l~~~~k~~k~~~~~~~G~i~l~ 330 (587)
++..+++++||++.+++.++...... ..|+.|... +.+.+. .|+|.|.
T Consensus 104 ~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~----~~~~~~-~G~L~v~ 156 (173)
T 2nq3_A 104 HQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD----KEPTET-IGDLSIC 156 (173)
T ss_dssp CCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES----SCTTSE-EEEEEEE
T ss_pred CCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC----CCCCcc-cEEEEEE
Confidence 99999999999999999999753221 124444332 112233 8999884
No 69
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.59 E-value=2.6e-15 Score=135.67 Aligned_cols=91 Identities=13% Similarity=0.240 Sum_probs=77.9
Q ss_pred ccccceeeeccccCCcCCCCCC-----------CCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCC
Q 007848 200 SKTTTELILRCSDLDCKDLFSR-----------NDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSK 267 (587)
Q Consensus 200 ~~~l~v~vi~a~~L~~~d~~g~-----------sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~ 267 (587)
.+.+.+.+++|++|+.+|.+++ +||||++++. + ..+.+|+++++|+||+||| |.|.+..
T Consensus 5 ~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~---~--~~~~~T~~~~~t~nP~WnE~f~f~v~~---- 75 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD---D--SRIGQTATKQKTNSPAWHDEFVTDVCN---- 75 (136)
T ss_dssp EEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET---T--EEEEECCCCSSCSSCEEEEEEEEEEEE----
T ss_pred ceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC---C--eEeeeeeEECCCcCCccCCEEEEEecC----
Confidence 3567788999999999986655 9999999982 3 3467999999999999998 8777653
Q ss_pred CCcEEEEEEeccCCCCCceeEEEEEechhhhh
Q 007848 268 DSPLIIECFNFNSNGKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 268 ~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~ 299 (587)
...|.|+|||++..++|++||++.+++.++..
T Consensus 76 ~~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~ 107 (136)
T 1gmi_A 76 GRKIELAVFHDAPIGYDDFVANCTIQFEELLQ 107 (136)
T ss_dssp ECEEEEEEEECCSSSSCEEEEEEEEEHHHHTS
T ss_pred CCEEEEEEEeCCCCCCCCEEEEEEEEHHHhcc
Confidence 27899999999999999999999999999964
No 70
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.58 E-value=9.7e-15 Score=136.48 Aligned_cols=94 Identities=16% Similarity=0.280 Sum_probs=79.2
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc--eeEEEEEEEEcC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVD 123 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~--~q~L~~~V~D~D 123 (587)
..+.++ ++|++|+++|..|++||||+|++.+. +......||+++++|+||.|+|+|.|.+..+. ...|+|+|||+|
T Consensus 37 ~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 115 (166)
T 2cm5_A 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPD-MGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYD 115 (166)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECC
T ss_pred CEEEEEEEEeECCCCccCCCCCCcEEEEEEECC-CCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECC
Confidence 445555 68999999999999999999999863 22346999999999999999999999987654 359999999999
Q ss_pred CCccccccccccccccccccceeeecchh
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQI 152 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l 152 (587)
.. +++++||++.++|.++
T Consensus 116 ~~-----------~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 116 IG-----------KSNDYIGGCQLGISAK 133 (166)
T ss_dssp SS-----------SCCEEEEEEEEETTCC
T ss_pred CC-----------CCCcEEEeEEEecccC
Confidence 75 7899999999999874
No 71
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.51 E-value=4e-14 Score=155.64 Aligned_cols=114 Identities=20% Similarity=0.297 Sum_probs=96.3
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQ 125 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~~ 125 (587)
..+.++ ++|++|+++|..|++||||+|++.+ ..+||+++++|+||.|++.|.|.+.....+.|+|+|||+|..
T Consensus 387 ~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~------~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 387 GRLMVHVIEATELKACKPNGKSNPYCEISMGS------QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred ceEEEEeceeecCCCCCCCCCCCeEEEEEECC------eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 456666 6899999999999999999999943 589999999999999999999998777778999999999975
Q ss_pred ccccccccccccccccccceeeecchhhccCC----eeEEEEccccccccccccccCCCCCCCCcccEEEeecc
Q 007848 126 FHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN----RSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAE 195 (587)
Q Consensus 126 ~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~----~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~ 195 (587)
+++++||++.++|.++..... ...|++|.. ...|+|.++++
T Consensus 461 -----------~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~------------------~~~G~i~l~~~ 505 (510)
T 3jzy_A 461 -----------SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHE------------------VPTGEVWVRFD 505 (510)
T ss_dssp -----------SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBS------------------SSSCEEEEEEE
T ss_pred -----------CCCCceEEEEEEHHHhccccCCCCceeeeecCCC------------------CCCceEEEEEE
Confidence 789999999999999976433 457888854 34688888764
No 72
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.47 E-value=1.1e-13 Score=152.10 Aligned_cols=96 Identities=25% Similarity=0.363 Sum_probs=80.4
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEee-cCceeEEEEEEEEcCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQ-FEVVQTLVFRIYDVDT 124 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~-~e~~q~L~~~V~D~D~ 124 (587)
..+.++ ++|++|++ |.+|++||||+|++.+ ..+||+++++|+||+|+|.|.|.+. ++..+.|+|+|||+|.
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~------~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG------QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEETT------EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEECC------EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 346665 68999999 9999999999999953 3699999999999999999999854 5677899999999997
Q ss_pred CccccccccccccccccccceeeecchhhccCCeeEEEEc
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDL 164 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L 164 (587)
. ++|||||++.++|.. .....|.+|
T Consensus 467 ~-----------~~dD~LG~~~~~L~~----g~~~~~~~l 491 (540)
T 3nsj_A 467 G-----------WDDDLLGSCDRSPHS----GFHEVTCEL 491 (540)
T ss_dssp S-----------SCCEEEEEEEECCCS----EEEEEEEEC
T ss_pred C-----------CCCCEEEEEEEEeeC----CcEEEEEEc
Confidence 6 689999999999872 223467766
No 73
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.42 E-value=3.9e-13 Score=147.71 Aligned_cols=93 Identities=14% Similarity=0.275 Sum_probs=81.1
Q ss_pred cccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEe
Q 007848 199 NSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFN 277 (587)
Q Consensus 199 ~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D 277 (587)
..+.+.+.+++|++|+.+|.+|.+||||++++.. .+++|+++++|+||+||+ |.|.+.. .....|.|+|||
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~------~~~~T~~~~~t~nP~w~e~f~f~~~~--~~~~~l~~~v~d 456 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGS------QSYTTRTIQDTLNPKWNFNCQFFIKD--LYQDVLCLTLFD 456 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEESC--TTTCEEEEEEEE
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECC------eeccCCccCCCCCCccCceEEEEecC--CCCCEEEEEEEe
Confidence 3456888999999999999999999999999832 378999999999999998 7777653 235789999999
Q ss_pred ccCCCCCceeEEEEEechhhhh
Q 007848 278 FNSNGKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 278 ~d~~~~dd~IG~~~i~l~~l~~ 299 (587)
+|..++|++||++.+++.++..
T Consensus 457 ~d~~~~~d~lG~~~~~l~~l~~ 478 (510)
T 3jzy_A 457 RDQFSPDDFLGRTEIPVAKIRT 478 (510)
T ss_dssp CCSSSSCCEEEEEEEEHHHHHH
T ss_pred CCCCCCCCceEEEEEEHHHhcc
Confidence 9999999999999999999975
No 74
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.42 E-value=3.7e-13 Score=147.75 Aligned_cols=87 Identities=21% Similarity=0.298 Sum_probs=76.3
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEecc
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d 279 (587)
+.+.|.+++|++|+. |.+|++||||+|++. ++ .+||+++++++||+||| |.|....+ .....|+|+|||+|
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~---~~---~~kTkvik~tlNP~Wne~f~f~~~~~-~~~~~L~~~V~D~D 465 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFG---GQ---EFRTGVVWNNNNPRWTDKMDFENVLL-STGGPLRVQVWDAD 465 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEET---TE---EEECCCBCSCSSCBCCCCEEEEEEET-TTCCCEEEEEEECC
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEEC---CE---eeeeeeecCCCCCCCCeEEEEEEecC-CCCCEEEEEEEECC
Confidence 458899999999999 999999999999994 32 59999999999999998 77775443 24689999999999
Q ss_pred CCCCCceeEEEEEech
Q 007848 280 SNGKHDLIGKVQKSLA 295 (587)
Q Consensus 280 ~~~~dd~IG~~~i~l~ 295 (587)
..++||+||.+.++|.
T Consensus 466 ~~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 466 YGWDDDLLGSCDRSPH 481 (540)
T ss_dssp SSSCCEEEEEEEECCC
T ss_pred CCCCCCEEEEEEEEee
Confidence 9999999999999987
No 75
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.33 E-value=9.6e-13 Score=148.86 Aligned_cols=106 Identities=18% Similarity=0.317 Sum_probs=92.3
Q ss_pred ccEEEEE-EEEeCCCC---CCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCceeEEEEEEEE
Q 007848 46 FSQIELS-FSAADLRD---RDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYD 121 (587)
Q Consensus 46 ~~~ieL~-v~arnL~~---~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D 121 (587)
...++++ ++|++|++ +|..|++||||+|++.+..+ .+.||+++++++||+|+|+|.|.+.....+.|+|+|||
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~---~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCC---CeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 3567777 69999999 89999999999999975322 58999999999999999999999887677899999999
Q ss_pred cCCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 122 VDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 122 ~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
+|.. + +++||++.++|.++........|++|..
T Consensus 94 ~D~~-----------~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 94 ANYV-----------M-DETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp CCSS-----------S-CEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred CCCC-----------C-CceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 9975 6 9999999999999977666778999864
No 76
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.33 E-value=4.6e-12 Score=113.71 Aligned_cols=84 Identities=13% Similarity=0.253 Sum_probs=67.3
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceec-CCCCCceee-ceEEeeecCCCCCcEEEEEEec
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNF 278 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik-~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~ 278 (587)
..+.|.+++|++|+. .|.+||||++. .. ..||.+++ +++||.||| |.|.+.. ....|.|+|||+
T Consensus 5 ~~L~V~V~~A~~l~~---~g~~DPYv~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~ 70 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---QEKFNTYVTLK-VQ-------NVKSTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNK 70 (131)
T ss_dssp EEEEEEEEEEECSSC---GGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEEECC---CSSEEEEEEEEC
T ss_pred eEEEEEEEEeECCCC---CCCcCeEEEEE-ec-------CEEEeEecCCCCCceECCEEEEEEeC---CCCeEEEEEEEC
Confidence 356778899998853 68899999998 22 23555554 799999998 7777753 356799999999
Q ss_pred cCCCCCceeEEEEEechhhhh
Q 007848 279 NSNGKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 279 d~~~~dd~IG~~~i~l~~l~~ 299 (587)
| .++|++||++.++|.++..
T Consensus 71 d-~~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 71 G-LIWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp C-SSCEEEEEEEEEEGGGSCB
T ss_pred C-CCCCCeEEEEEEEHHHhhh
Confidence 9 8899999999999999864
No 77
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.31 E-value=6.6e-12 Score=140.66 Aligned_cols=105 Identities=18% Similarity=0.310 Sum_probs=87.2
Q ss_pred cEEEEE-EEEeCCCCCCC--CCCCCcEEEEEEecCCCceeeEeeeeeecCC-CCCceeeeEEEEeecCceeEEEEEEEEc
Q 007848 47 SQIELS-FSAADLRDRDV--LSKSDPMLVVYMKARDGALVEVGRTEVVLNS-LNPTWITKHIITYQFEVVQTLVFRIYDV 122 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~--~gksDPyv~v~~~~~~~~~~~~~rTevi~~t-lNP~w~e~f~~~~~~e~~q~L~~~V~D~ 122 (587)
..+.+. ++|++|+.+|. .+++||||+|.+.+.... ....||+++++| +||+|+|+|.|.+..+....|+|.|||+
T Consensus 497 ~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d-~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~ 575 (624)
T 1djx_A 497 ERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRD-TGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDY 575 (624)
T ss_dssp EEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGG-CEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEEC
T ss_pred eEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCC-cceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEc
Confidence 456665 68999999984 789999999999652111 257899999998 9999999999998887778999999999
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|.. +++++||++.++|..|..+ ..|++|.+
T Consensus 576 D~~-----------~~dd~iG~~~ipl~~L~~G---~r~v~L~d 605 (624)
T 1djx_A 576 DSS-----------SKNDFIGQSTIPWNSLKQG---YRHVHLLS 605 (624)
T ss_dssp CSS-----------SCCEEEEEEEEEGGGBCCE---EEEEEEEC
T ss_pred CCC-----------CCCceeEEEEEEHHHcCCC---cEEEeCCC
Confidence 975 7899999999999999653 35888865
No 78
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.30 E-value=7.8e-12 Score=112.19 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=70.9
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeec-CCCCCceeeeEEEEeecCceeEEEEEEEEcCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~-~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~ 124 (587)
..+.++ ++|++|+. .|++||||+|. .. ..||.+++ +++||.|+|.|.|.+.. ....|+|+|||+|
T Consensus 5 ~~L~V~V~~A~~l~~---~g~~DPYv~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d- 71 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA---QEKFNTYVTLK-VQ-------NVKSTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG- 71 (131)
T ss_dssp EEEEEEEEEEECSSC---GGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEEECC-CSSEEEEEEEECC-
T ss_pred eEEEEEEEEeECCCC---CCCcCeEEEEE-ec-------CEEEeEecCCCCCceECCEEEEEEeC-CCCeEEEEEEECC-
Confidence 456666 57888753 68899999999 21 34566554 79999999999998764 3347999999999
Q ss_pred CccccccccccccccccccceeeecchhhccC--CeeEEEEc
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRK--NRSLTLDL 164 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~--~~~l~~~L 164 (587)
. +++++||++.++|.++.... +...|.++
T Consensus 72 ~-----------~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~ 102 (131)
T 2cjt_A 72 L-----------IWDTMVGTVWIPLRTIRQSNEEGPGEWLTL 102 (131)
T ss_dssp S-----------SCEEEEEEEEEEGGGSCBCSSCCCCEEEEC
T ss_pred C-----------CCCCeEEEEEEEHHHhhhcCCCCccccEEc
Confidence 6 68999999999999986543 22245555
No 79
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.30 E-value=6e-12 Score=112.69 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=94.2
Q ss_pred cEEEEE---EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeec-CCCCCceeeeEEEEeec--CceeEEEEEEE
Q 007848 47 SQIELS---FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQF--EVVQTLVFRIY 120 (587)
Q Consensus 47 ~~ieL~---v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~-~tlNP~w~e~f~~~~~~--e~~q~L~~~V~ 120 (587)
+-..|+ .+|.+|+ +++|||++|.+++ .+.||++++ +++||.|+|.|.++... +....|.|.||
T Consensus 19 ~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg------~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~ 87 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR-----GRADRIAKVTFRG------QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIF 87 (144)
T ss_dssp CCEEEEEEEEEEESCC-----SCEEEEEEEEETT------EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEE
T ss_pred CcEEEEEEEEEecCCC-----CCCCCeEEEEEec------cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEE
Confidence 335555 3689998 5899999999964 699999998 69999999999998553 34469999999
Q ss_pred EcCCCccccccccccccccccccceeeecchhhccCCeeEEEEccccccccccccccCCCCCCCCcccEEEeecceeccc
Q 007848 121 DVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINS 200 (587)
Q Consensus 121 D~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~~~~ 200 (587)
|+++. +++.+||++.++|.++...+...++.+|.+ .+. ....++|.+.+.|.+..
T Consensus 88 d~~~v-----------~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD-----------~n~---~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 88 NYSKV-----------FSNKLIGTFRMVLQKVVEENRVEVSDTLID-----------DNN---AIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp EECTT-----------SCCEEEEEEEEESHHHHHHSEEEEEEEEEC-----------TTS---CEEEEEEEEEEEEEETT
T ss_pred ECccc-----------cCCCEEEEEEEEhHHhccCCeEEEeecccC-----------CCC---CccccEEEEEEEecCCC
Confidence 99976 789999999999999998876667777765 221 13347888888887654
Q ss_pred c
Q 007848 201 K 201 (587)
Q Consensus 201 ~ 201 (587)
+
T Consensus 143 g 143 (144)
T 3l9b_A 143 G 143 (144)
T ss_dssp C
T ss_pred C
Confidence 3
No 80
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.28 E-value=4.4e-12 Score=118.64 Aligned_cols=84 Identities=12% Similarity=0.239 Sum_probs=67.8
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceec-CCCCCceee-ceEEeeecCCCCCcEEEEEEec
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNF 278 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik-~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~ 278 (587)
..+.|.+++|++|+ ..|++||||++. .. .+||.+++ +++||+||| |.|.+.. ....|.|+|||+
T Consensus 14 ~~L~V~V~~A~~l~---~~g~~DPYV~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~ 79 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEKFNTYVTLK-VQ-------NVESTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNK 79 (167)
T ss_dssp CEEEEEEEEEECSS---CGGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEECCC---TTSEEEEEEEEC
T ss_pred EEEEEEEEEEECCC---CCCCCCeEEEEE-ec-------ceEEEEecCCCCCCCCCCEEEEEeeC---CCCEEEEEEEEC
Confidence 35677888999884 368899999998 22 24666665 699999998 7777763 356899999999
Q ss_pred cCCCCCceeEEEEEechhhhh
Q 007848 279 NSNGKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 279 d~~~~dd~IG~~~i~l~~l~~ 299 (587)
| .++|++||++.++|.++..
T Consensus 80 d-~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 80 G-LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp C-SSCCEEEEEEEEEGGGSCB
T ss_pred C-CCCCceEEEEEEEHHHhcc
Confidence 9 8889999999999999854
No 81
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.26 E-value=1.5e-11 Score=110.05 Aligned_cols=87 Identities=17% Similarity=0.196 Sum_probs=75.3
Q ss_pred ccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceec-CCCCCceee-ceEEeeecCCCCCcEEEEEEecc
Q 007848 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 279 (587)
Q Consensus 202 ~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik-~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d 279 (587)
.+.|.+.+|.+|+ |++|||+++.+.+ .++||++++ +++||+||| |++++..--+.+..|.|.|+|++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg------~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRG------QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETT------EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEec------cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 3667788999998 6899999999943 378999998 699999999 88777543355789999999999
Q ss_pred CCCCCceeEEEEEechhhhh
Q 007848 280 SNGKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 280 ~~~~dd~IG~~~i~l~~l~~ 299 (587)
+.+++++||++.++|.++..
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~ 110 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVE 110 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHH
T ss_pred cccCCCEEEEEEEEhHHhcc
Confidence 99999999999999999975
No 82
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.25 E-value=1.1e-11 Score=140.99 Aligned_cols=122 Identities=17% Similarity=0.348 Sum_probs=99.2
Q ss_pred CcccEEEeecceeccccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeee
Q 007848 185 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 263 (587)
Q Consensus 185 ~~~G~I~l~~~~~~~~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~ 263 (587)
..+|.|.++... ..+.+.+.+++|++|+.+|.+|.+|||+++++..+ +....++||+++++++||+||+ |.|.+..
T Consensus 158 ~~~g~i~~~~~~--~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~-~~~~~k~kT~v~~~tlnP~wne~f~f~~~~ 234 (674)
T 3pfq_A 158 ERRGRIYIQAHI--DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPD-PKSESKQKTKTIKSSLNPEWNETFRFQLKE 234 (674)
T ss_dssp CCSCEEEEEEEE--CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESC-SSCCSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred ccccccccccee--ccceeeeeeecccccCCCCcccccCcccccccccC-ccccccccccccccccCCCccceeeeeccc
Confidence 557888887764 35678899999999999999999999999999763 4445678999999999999998 7666543
Q ss_pred cCCCCCcEEEEEEeccCCCCCceeEEEEEechhhhhccCCCceeEeec
Q 007848 264 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 311 (587)
Q Consensus 264 l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~ 311 (587)
.+....|.|+|||+|..+++++||++.+++.++.. .+...|+.++.
T Consensus 235 -~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~-~~~~~w~~Lls 280 (674)
T 3pfq_A 235 -SDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQK-AGVDGWFKLLS 280 (674)
T ss_dssp -TTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHH-CCEEEEEECBC
T ss_pred -CCccceeeeEEeecccccccccccccccchhhhcc-CCcccceeecc
Confidence 24456799999999999999999999999999975 33345666554
No 83
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.24 E-value=2.5e-11 Score=113.55 Aligned_cols=85 Identities=11% Similarity=0.116 Sum_probs=68.2
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeec-CCCCCceeeeEEEEeecCceeEEEEEEEEcCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDVDT 124 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~-~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~ 124 (587)
..+.++ ++|++|+ ..+++||||+|. .. ..||.+++ +++||.|+|.|.|.+.. ....|+|+|||+|
T Consensus 14 ~~L~V~V~~A~~l~---~~g~~DPYV~v~-~~-------~~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d- 80 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEKFNTYVTLK-VQ-------NVESTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG- 80 (167)
T ss_dssp CEEEEEEEEEECSS---CGGGCEEEEEEE-ET-------TEEEECCCEESSSCEEEEEEEEECCC-TTSEEEEEEEECC-
T ss_pred EEEEEEEEEEECCC---CCCCCCeEEEEE-ec-------ceEEEEecCCCCCCCCCCEEEEEeeC-CCCEEEEEEEECC-
Confidence 456666 5788874 368999999999 21 34677765 69999999999998774 3347999999999
Q ss_pred Cccccccccccccccccccceeeecchhhcc
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTR 155 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~ 155 (587)
. +++|+||++.++|.++...
T Consensus 81 ~-----------~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 L-----------IWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp S-----------SCCEEEEEEEEEGGGSCBC
T ss_pred C-----------CCCceEEEEEEEHHHhccc
Confidence 5 6899999999999998654
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.22 E-value=5.6e-12 Score=142.63 Aligned_cols=105 Identities=14% Similarity=0.228 Sum_probs=85.8
Q ss_pred cccccceeeeccccCCc---CCCCCCCCcEEEEEEEcCCCceeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEE
Q 007848 199 NSKTTTELILRCSDLDC---KDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIE 274 (587)
Q Consensus 199 ~~~~l~v~vi~a~~L~~---~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~ 274 (587)
..+.+.|.+++|++|+. +|..|++||||++++... ...++||+++++++||+||| |.|.+.. .....|+|+
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~---~~~k~kTkvik~tlNPvWNEtF~F~v~~--~~~~~L~~~ 90 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTT---PDSRKRTRHFNNDINPVWNETFEFILDP--NQENVLEIT 90 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTS---TTCCEECCCCTTCSSCEEEEEEEEEECT--TSCCBCEEE
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecC---CCCeEecceEcCCCCCeeeeEEEEEecC--CCCCEEEEE
Confidence 35678888999999999 899999999999999542 12478999999999999998 8777763 236789999
Q ss_pred EEeccCCCCCceeEEEEEechhhhhccCCCceeEe
Q 007848 275 CFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNL 309 (587)
Q Consensus 275 V~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l 309 (587)
|||+|..+ +++||++.+++.+|........|++|
T Consensus 91 V~D~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L 124 (749)
T 1cjy_A 91 LMDANYVM-DETLGTATFTVSSMKVGEKKEVPFIF 124 (749)
T ss_dssp EEECCSSS-CEEEEEECCBSTTSCTTCCCCEEEEE
T ss_pred EEECCCCC-CceeEEEEEEHHHcCCCCceEEEEec
Confidence 99999999 99999999999999643333345554
No 85
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.20 E-value=2.8e-11 Score=135.58 Aligned_cols=107 Identities=16% Similarity=0.195 Sum_probs=85.1
Q ss_pred ccccceeeeccccCCcCCC--CCCCCcEEEEEEEcCCCceeeEEecceecCC-CCCceee-ceEEeeecCCCCCcEEEEE
Q 007848 200 SKTTTELILRCSDLDCKDL--FSRNDPFLVISKIVESGTHIPVCKTEVLKNE-TKPTWKS-VFLNIQQVGSKDSPLIIEC 275 (587)
Q Consensus 200 ~~~l~v~vi~a~~L~~~d~--~g~sDPyv~v~~~~~~g~~~~~~kT~vik~t-lnP~Wne-f~~~~~~l~~~~~~L~i~V 275 (587)
...+.|.|++|++|+.++. .+.+||||+|.+.+... ....+||++++++ +||+||| |.|.+.. .....|.|+|
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~-d~~~~kTkvi~~ng~NP~WnE~f~F~v~~--~el~~L~~~V 572 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGR-DTGSRQTAVITNNGFNPRWDMEFEFEVTV--PDLALVRFMV 572 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGG-GCEEEECCCCTTCSSSCEEEEEEEEEESC--GGGCEEEEEE
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCC-CcceeecccccCCCCCCccCceEEEEEec--CCCCEEEEEE
Confidence 3467788999999999984 78999999999965211 1347899999998 9999998 7776642 1236899999
Q ss_pred EeccCCCCCceeEEEEEechhhhhccCCCceeEeecc
Q 007848 276 FNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 276 ~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
||+|..+++++||++.++|.+|.. + .++++|.+.
T Consensus 573 ~D~D~~~~dd~iG~~~ipl~~L~~--G-~r~v~L~d~ 606 (624)
T 1djx_A 573 EDYDSSSKNDFIGQSTIPWNSLKQ--G-YRHVHLLSK 606 (624)
T ss_dssp EECCSSSCCEEEEEEEEEGGGBCC--E-EEEEEEECT
T ss_pred EEcCCCCCCceeEEEEEEHHHcCC--C-cEEEeCCCC
Confidence 999999999999999999999954 2 246677654
No 86
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.14 E-value=9.8e-11 Score=133.02 Aligned_cols=107 Identities=20% Similarity=0.247 Sum_probs=88.7
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecC-ceeEEEEEEEEcCC
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDT 124 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e-~~q~L~~~V~D~D~ 124 (587)
..+.+. ++|++|+++|..|++||||++++.+ ++....+.||+++++|+||.|+|+|.|.+... ..+.|.|+|||+|.
T Consensus 172 ~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p-~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~ 250 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 250 (674)
T ss_dssp SEEEEEEEEEESCCCCSTTSSCCEEEEEEEES-CSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS
T ss_pred ceeeeeeecccccCCCCcccccCccccccccc-CccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc
Confidence 345554 6899999999999999999999976 23334688999999999999999999887543 33579999999997
Q ss_pred CccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 125 QFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 125 ~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
. +++|+||++.++|.++.... ...|++|..
T Consensus 251 ~-----------~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 251 T-----------SRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp S-----------SCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred c-----------cccccccccccchhhhccCC-cccceeecc
Confidence 6 78999999999999998654 467888855
No 87
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.97 E-value=5.3e-11 Score=129.77 Aligned_cols=101 Identities=16% Similarity=0.139 Sum_probs=9.4
Q ss_pred ccccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCC---CCCceee-ceEEeeecCCCCCcEEEEE
Q 007848 200 SKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNE---TKPTWKS-VFLNIQQVGSKDSPLIIEC 275 (587)
Q Consensus 200 ~~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~t---lnP~Wne-f~~~~~~l~~~~~~L~i~V 275 (587)
.+.+.|.+++|++|+.+| ||||++++.+ ....||+++++| +||+||| |.|.+. +....|.|+|
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~-----~~~~kT~v~~kt~~glnP~WnE~F~f~~~---~~~~~L~v~V 76 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDD-----MLYARTTSKPRSASGDTVFWGEHFEFNNL---PAVRALRLHL 76 (483)
T ss_dssp EECC-------------------------------------------------------CCEECC---------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECC-----eEEeeeeEEeCCCCCCCCccccEEEEecC---CCccEEEEEE
Confidence 356888999999999887 9999999843 135699999999 9999998 666542 1147899999
Q ss_pred Ee-cc---CCCCCceeEEEEEechhhhhccCCCceeEeeccc
Q 007848 276 FN-FN---SNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 313 (587)
Q Consensus 276 ~D-~d---~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~~ 313 (587)
|| ++ ..+++++||.+.+++.++........||+|..++
T Consensus 77 ~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~ 118 (483)
T 3bxj_A 77 YRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT 118 (483)
T ss_dssp ------------------------------CCEECC------
T ss_pred EecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence 99 45 3578899999999999997534444677876654
No 88
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.91 E-value=1.1e-10 Score=127.18 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=11.3
Q ss_pred EEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCC---CCCceeeeEEEEeecCceeEEEEEEEE-c
Q 007848 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNS---LNPTWITKHIITYQFEVVQTLVFRIYD-V 122 (587)
Q Consensus 48 ~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~t---lNP~w~e~f~~~~~~e~~q~L~~~V~D-~ 122 (587)
+++++ ++|++|+++| ||||++++.+ + ..+||+++++| +||.|+|+|.|..... .+.|.|+||| +
T Consensus 12 ~L~V~VieAk~L~~~d-----dpYv~v~l~~---~--~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~~ 80 (483)
T 3bxj_A 12 VLKLWIIEARELPPKK-----RYYCELCLDD---M--LYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRDS 80 (483)
T ss_dssp CC-------------------------------------------------------CCEECC-----------------
T ss_pred EEEEEEEEcCCcCCCC-----CCeEEEEECC---e--EEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEecC
Confidence 45555 6899999988 9999999954 1 36799999999 9999999999875433 4799999999 4
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
|... ..+++++||++.+++.++........|++|..
T Consensus 81 d~~~--------~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 81 DKKR--------KKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ----------------------------------CCEECC----
T ss_pred Cccc--------cCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 5310 12689999999999999987666778999954
No 89
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.81 E-value=1.1e-08 Score=117.62 Aligned_cols=97 Identities=19% Similarity=0.191 Sum_probs=74.4
Q ss_pred EEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCC-CCCceee-eEEEE-eecCceeEEEEEEEEcC
Q 007848 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNS-LNPTWIT-KHIIT-YQFEVVQTLVFRIYDVD 123 (587)
Q Consensus 48 ~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~t-lNP~w~e-~f~~~-~~~e~~q~L~~~V~D~D 123 (587)
.+.+. ++|++|+.+ ++||||+|.+.+....-..+.||+++++| +||+|+| +|.|. +..++...|+|.|||+|
T Consensus 726 ~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d 801 (885)
T 3ohm_B 726 ALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG 801 (885)
T ss_dssp EEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT
T ss_pred EEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC
Confidence 45555 689999863 68999999997521111135799999865 9999999 69998 66666779999999976
Q ss_pred CCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 124 TQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 124 ~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
+||||++.++|..|..+ -.+.+|.+
T Consensus 802 ---------------ddfiG~~~lpL~~L~~G---yR~vpL~~ 826 (885)
T 3ohm_B 802 ---------------GKFVGHRILPVSAIRSG---YHYVCLRN 826 (885)
T ss_dssp ---------------TEEEEEEEEETTTCCCE---EEEEEEEC
T ss_pred ---------------ccEEeeEEEEHHHcCCC---ceEEEecC
Confidence 47999999999998643 34578865
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.76 E-value=2.4e-08 Score=114.66 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=75.5
Q ss_pred cEEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeee-eecC-CCCCceee-eEEE-EeecCceeEEEEEEEE
Q 007848 47 SQIELS-FSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTE-VVLN-SLNPTWIT-KHII-TYQFEVVQTLVFRIYD 121 (587)
Q Consensus 47 ~~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTe-vi~~-tlNP~w~e-~f~~-~~~~e~~q~L~~~V~D 121 (587)
..+.+. ++|++|++ +++||||+|.+.+.......+.||+ ++++ ++||+|+| +|.| .+..++...|+|.|||
T Consensus 678 ~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D 753 (799)
T 2zkm_X 678 TTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVME 753 (799)
T ss_dssp EEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEE
T ss_pred eeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEE
Confidence 356665 68999986 4689999999965211111357999 8865 59999999 7999 7777777899999999
Q ss_pred cCCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 122 VDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 122 ~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
+| +++||++.++|..|.. .-.+.+|.+
T Consensus 754 ~d---------------~d~iG~~~ipl~~L~~---G~r~v~L~~ 780 (799)
T 2zkm_X 754 EG---------------NKFLGHRIIPINALNS---GYHHLCLHS 780 (799)
T ss_dssp TT---------------TEEEEEEEEEGGGBCC---EEEEEEEEC
T ss_pred eC---------------CCccceEeeehhhcCC---CcEEEeccC
Confidence 76 4799999999999864 235678865
No 91
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.76 E-value=2.5e-08 Score=113.96 Aligned_cols=97 Identities=18% Similarity=0.244 Sum_probs=75.4
Q ss_pred EEEEE-EEEeCCCCCCCCCCCCcEEEEEEecCC-CceeeEeeeeeecC-CCCCceeee-EEEE-eecCceeEEEEEEEEc
Q 007848 48 QIELS-FSAADLRDRDVLSKSDPMLVVYMKARD-GALVEVGRTEVVLN-SLNPTWITK-HIIT-YQFEVVQTLVFRIYDV 122 (587)
Q Consensus 48 ~ieL~-v~arnL~~~D~~gksDPyv~v~~~~~~-~~~~~~~rTevi~~-tlNP~w~e~-f~~~-~~~e~~q~L~~~V~D~ 122 (587)
.+.+. ++|++|+++ ++||||+|.+.+.. +......||+++++ ++||+|+|. |.|. +..++...|+|.|||+
T Consensus 651 ~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~ 726 (816)
T 3qr0_A 651 TIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEE 726 (816)
T ss_dssp EEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred EEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEec
Confidence 45555 689999864 68999999997521 11224789999986 499999997 9998 7667778999999997
Q ss_pred CCCccccccccccccccccccceeeecchhhccCCeeEEEEccc
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSLTLDLVR 166 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~~~l~~~L~~ 166 (587)
| +||||++.++|..|..+ -.+.+|.+
T Consensus 727 d---------------ddfiG~~~ipL~~L~~G---yR~vpL~~ 752 (816)
T 3qr0_A 727 N---------------GKFIGHRVMPLDGIKPG---YRHVPLRN 752 (816)
T ss_dssp T---------------SCEEEEEEEESTTCCCE---EEEEEEEC
T ss_pred C---------------CCeeeEEEEEHHHcCCc---ceEEEEeC
Confidence 5 47999999999998653 34678865
No 92
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.73 E-value=1.4e-08 Score=116.69 Aligned_cols=98 Identities=9% Similarity=0.090 Sum_probs=72.5
Q ss_pred ccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecceecCC-CCCceee--ceEE-eeecCCCCCcEEEEEEe
Q 007848 202 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNE-TKPTWKS--VFLN-IQQVGSKDSPLIIECFN 277 (587)
Q Consensus 202 ~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~vik~t-lnP~Wne--f~~~-~~~l~~~~~~L~i~V~D 277 (587)
.+.|.|++|++|+.. .+||||+|.+.+.......++||++++++ +||+||+ |.|. +. . .....|.|+|||
T Consensus 726 ~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~-~-pela~Lrf~V~D 799 (885)
T 3ohm_B 726 ALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVV-L-PTLASLRIAAFE 799 (885)
T ss_dssp EEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEES-C-GGGCEEEEEEEE
T ss_pred EEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEE-c-CCcCEEEEEEEc
Confidence 577889999999863 68999999997521111235799999875 9999997 7776 32 1 123579999999
Q ss_pred ccCCCCCceeEEEEEechhhhhccCCCceeEeecc
Q 007848 278 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 278 ~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
+| +++||++.++|..|.. + -+..+|.+.
T Consensus 800 ~d----ddfiG~~~lpL~~L~~--G-yR~vpL~~~ 827 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRS--G-YHYVCLRNE 827 (885)
T ss_dssp TT----TEEEEEEEEETTTCCC--E-EEEEEEECT
T ss_pred CC----ccEEeeEEEEHHHcCC--C-ceEEEecCC
Confidence 87 6899999999999954 2 234556553
No 93
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.64 E-value=3.9e-08 Score=112.83 Aligned_cols=99 Identities=12% Similarity=0.154 Sum_probs=72.7
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCceeeEEecc-eecC-CCCCceee--ceE-EeeecCCCCCcEEEEE
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTE-VLKN-ETKPTWKS--VFL-NIQQVGSKDSPLIIEC 275 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~~~~kT~-vik~-tlnP~Wne--f~~-~~~~l~~~~~~L~i~V 275 (587)
+.+.+.+++|++|+. +++||||+|.+.+..+....++||+ ++++ ++||+||| |.| .+.. +.-..|.|+|
T Consensus 678 ~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~--~el~~Lr~~V 751 (799)
T 2zkm_X 678 TTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILM--PELASLRVAV 751 (799)
T ss_dssp EEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESS--GGGCEEEEEE
T ss_pred eeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEcc--CCccEEEEEE
Confidence 357788999999985 4789999999965222222358999 8875 59999997 667 4421 2234799999
Q ss_pred EeccCCCCCceeEEEEEechhhhhccCCCceeEeecc
Q 007848 276 FNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 276 ~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
||++ +++||++.+++..|.. + -.+.+|.+.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~--G-~r~v~L~~~ 781 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNS--G-YHHLCLHSE 781 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCC--E-EEEEEEECT
T ss_pred EEeC----CCccceEeeehhhcCC--C-cEEEeccCC
Confidence 9996 6899999999999954 2 235566553
No 94
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.57 E-value=2.1e-07 Score=106.48 Aligned_cols=99 Identities=14% Similarity=0.111 Sum_probs=73.1
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCc-eeeEEecceecCC-CCCceee--ceEE-eeecCCCCCcEEEEE
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGT-HIPVCKTEVLKNE-TKPTWKS--VFLN-IQQVGSKDSPLIIEC 275 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~-~~~~~kT~vik~t-lnP~Wne--f~~~-~~~l~~~~~~L~i~V 275 (587)
..+.|.+++|++|+.+ .+||||+|.+.+.... ....+||++++++ +||+||| |.|. +. . +.-..|.|+|
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~-~-pela~Lrf~V 723 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVV-L-PDLAVVRIIV 723 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEES-C-GGGCEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEcccc-C-CCccEEEEEE
Confidence 3577889999999863 6899999999752111 1247899999875 9999996 6666 32 1 1235799999
Q ss_pred EeccCCCCCceeEEEEEechhhhhccCCCceeEeecc
Q 007848 276 FNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 312 (587)
Q Consensus 276 ~D~d~~~~dd~IG~~~i~l~~l~~~~~~~~~~~l~~~ 312 (587)
||++ +++||++.++|..|.. + -+..+|.+.
T Consensus 724 ~D~d----ddfiG~~~ipL~~L~~--G-yR~vpL~~~ 753 (816)
T 3qr0_A 724 SEEN----GKFIGHRVMPLDGIKP--G-YRHVPLRNE 753 (816)
T ss_dssp EETT----SCEEEEEEEESTTCCC--E-EEEEEEECT
T ss_pred EecC----CCeeeEEEEEHHHcCC--c-ceEEEEeCC
Confidence 9985 6899999999999964 2 235566553
No 95
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.38 E-value=2.4e-06 Score=75.23 Aligned_cols=93 Identities=16% Similarity=0.224 Sum_probs=70.5
Q ss_pred CCCcEEEEEEecCCCceeeEeee-eeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCCCccccccccccccccccccc
Q 007848 66 KSDPMLVVYMKARDGALVEVGRT-EVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGE 144 (587)
Q Consensus 66 ksDPyv~v~~~~~~~~~~~~~rT-evi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~~~~~~~~~~~~l~~~d~LG~ 144 (587)
..||||.|.+... ...+.+|| ..+++|..|.|++.|.-.+.. -+.|.|.|++.. .+|+..
T Consensus 31 ~lDPY~aV~VdE~--~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a---------------~~fVAn 91 (138)
T 2enj_A 31 AVNPYCAVLVKEY--VESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN---------------VDLISE 91 (138)
T ss_dssp CCCCEEEEEEEEE--EEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS---------------CSCCEE
T ss_pred cCCceEEEEeeee--eeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC---------------CCeeeE
Confidence 5799999999751 11134889 888999999999999765543 458889998422 389999
Q ss_pred eeeecchhhcc-----CCeeEEEEccccccccccccccCCCCCCCCcccEEEeeccee
Q 007848 145 ATCTLSQIVTR-----KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (587)
Q Consensus 145 ~~i~L~~l~~~-----~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~ 197 (587)
|.+.+.+|... .....|.+|++ .|+|++.++..
T Consensus 92 ~tV~~edL~~~ck~~~g~~e~WvdLeP--------------------~Gkl~v~i~~~ 129 (138)
T 2enj_A 92 TTVELYSLAERCRKNNGKTEIWLELKP--------------------QGRMLMNARYF 129 (138)
T ss_dssp EEEESHHHHHHHHHTTTCEEEEEECBS--------------------SCEEEEEEEEC
T ss_pred EEEEHHHHHhhhccCCCceEEEEeccc--------------------CcEEEEEEEEE
Confidence 99999999833 34468999965 58888877664
No 96
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.32 E-value=5.2e-06 Score=72.18 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=70.5
Q ss_pred CCCCcEEEEEEecCCCceeeEeee-eeecCCCCCceeeeEEEEeecCceeEEEEEEEEcCCCcccccccccccccccccc
Q 007848 65 SKSDPMLVVYMKARDGALVEVGRT-EVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLG 143 (587)
Q Consensus 65 gksDPyv~v~~~~~~~~~~~~~rT-evi~~tlNP~w~e~f~~~~~~e~~q~L~~~V~D~D~~~~~~~~~~~~l~~~d~LG 143 (587)
...||||.|.+... ...+.+|| ...++|..|.|++.|.-.+.. -+.|.+.|++.. .+|+.
T Consensus 25 ~~lDPy~aV~vdE~--~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a---------------~~fvA 85 (126)
T 1yrk_A 25 EANQPFCAVKMKEA--LSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA---------------EEPVS 85 (126)
T ss_dssp SSCCCEEEEEEEEE--EEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEET---------------TEEEE
T ss_pred ccCCceEEEEeeee--EEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCC---------------CCeee
Confidence 35899999999751 11135587 888999999999999766554 348889999633 28999
Q ss_pred ceeeecchhhcc-----CCeeEEEEccccccccccccccCCCCCCCCcccEEEeeccee
Q 007848 144 EATCTLSQIVTR-----KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 197 (587)
Q Consensus 144 ~~~i~L~~l~~~-----~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~G~I~l~~~~~ 197 (587)
.|.+.+.+|... .....|.+|++ .|+|++.++..
T Consensus 86 n~tV~~edL~~~c~~~~g~~e~WvdLeP--------------------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 86 EVTVGVSVLAERCKKNNGKAEFWLDLQP--------------------QAKVLMSVQYF 124 (126)
T ss_dssp EEEEEHHHHHHHHHTTTTEEEEEEECBS--------------------SCEEEEEEEEE
T ss_pred EEEEEHHHHHhhhccCCCceEEEEeccc--------------------CcEEEEEEEEe
Confidence 999999999843 23468999965 58888877653
No 97
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=98.18 E-value=1.1e-05 Score=80.80 Aligned_cols=154 Identities=12% Similarity=0.190 Sum_probs=106.6
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHH-HHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAY-QRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLN 424 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y-~~ai~~i~~~~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~ 424 (587)
.+++++.||-|+| |. ...+ +++...+..++..++ .+-++-++.|+.. +...|+|+
T Consensus 18 ~~DivfvlD~SgS------------M~----~~~~~~~~k~~~~~lv~~l~~~~~~~rvglv~Fs~~-----~~~~~~l~ 76 (266)
T 4hqo_A 18 QVDLYLLVDGSGS------------IG----YPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSY-----TTELIRLG 76 (266)
T ss_dssp CEEEEEEEECSTT------------TC----HHHHHHTHHHHHHHHHHTCCBCTTSEEEEEEEESSS-----EEEEECTT
T ss_pred ceeEEEEEECCCC------------cC----hhHHHHHHHHHHHHHHHHcccCCCCcEEEEEEecCC-----cceEEecC
Confidence 4899999999997 43 2345 466777777777776 4456788888775 33356655
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCHHHHHHHHHHcc
Q 007848 425 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKAS 504 (587)
Q Consensus 425 ~~~~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as 504 (587)
.. .-...+.+.++-.+.-......|-|+....|+.|.+...... ......-++++||||..+|..++.+++..+.
T Consensus 77 ~~----~~~~~~~~~~~i~~l~~~~~~~G~T~~~~AL~~a~~~l~~~~-~r~~~~~~iIllTDG~~~d~~~~~~~a~~l~ 151 (266)
T 4hqo_A 77 SG----QSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRV-NREKAIQLVILMTDGVPNSKYRALEVANKLK 151 (266)
T ss_dssp SH----HHHCHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHTTC-SCTTSEEEEEEEECSCCSCHHHHHHHHHHHH
T ss_pred CC----CccCHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHhhcc-ccCCCCeEEEEEccCCCCCchHHHHHHHHHH
Confidence 31 111234454444433223367899999999999976654321 2345678999999999999888888888888
Q ss_pred CCCeEEEEEecCCC-Cchhhhhccc
Q 007848 505 DLPLSILIIGVGGA-DFKEMEILDA 528 (587)
Q Consensus 505 ~lPlSiiiVGvG~~-~f~~m~~ld~ 528 (587)
...+.|..||||++ +-..|+.+-+
T Consensus 152 ~~gi~i~~iGiG~~~~~~~L~~iA~ 176 (266)
T 4hqo_A 152 QRNVRLAVIGIGQGINHQFNRLIAG 176 (266)
T ss_dssp HTTCEEEEEECSSSCCHHHHHHHHT
T ss_pred HCCCEEEEEecCcccCHHHHHHhhC
Confidence 88999999999986 4444466653
No 98
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=98.13 E-value=3.9e-05 Score=77.19 Aligned_cols=154 Identities=16% Similarity=0.209 Sum_probs=108.0
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHH-HHHHHHHhhhcccccC---CCCcceeeecccCCCCCceeEEeCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAY-QRAILEVGEVLQVYDS---DKRFPAWGFGARPIDGPVSHCFNLN 424 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y-~~ai~~i~~~~~~yd~---d~~~~~~gFG~~~~~~~~~~~f~l~ 424 (587)
.+++++.||-|+| |. ...+ +++...+..++..+.. .-++-++.|+.. +...|+|+
T Consensus 21 ~~div~vlD~SgS------------M~----~~~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs~~-----~~~~~~l~ 79 (281)
T 4hqf_A 21 EVDLYLLMDGSGS------------IR----RHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNN-----AREIIRLH 79 (281)
T ss_dssp CEEEEEEEECCCC------------SS----THHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEETT-----EEEEEEEC
T ss_pred ceeEEEEEeCCCC------------cC----HHHHHHHHHHHHHHHHHHhccCCCCcEEEEEEcCCC-----ceEEEEcc
Confidence 5999999999997 43 2244 6677777777777765 455888888765 23356766
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCHHHHHHHHHHcc
Q 007848 425 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKAS 504 (587)
Q Consensus 425 ~~~~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as 504 (587)
... -...+.++++-...-......|-|++...|+.|.+...... .....-.++++||||.-+|..++.+++..+.
T Consensus 80 ~~~----~~~~~~l~~~i~~l~~~~~~~G~T~~~~aL~~a~~~l~~~~-~r~~~~~~iillTDG~~~d~~~~~~~~~~l~ 154 (281)
T 4hqf_A 80 SDA----SKNKEKALIIIKSLLSTNLPYGKTSLTDALLQVRKHLNDRI-NRENANQLVVILTDGIPDSIQDSLKESRKLS 154 (281)
T ss_dssp SSC----SSCHHHHHHHHHHHHHTTGGGCSCCHHHHHHHHHHHHHTSC-CCTTCEEEEEEEESSCCSCHHHHHHHHHHHH
T ss_pred ccC----ccCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHhcc-CCCCCCEEEEEEecCCCCCcHHHHHHHHHHH
Confidence 421 11235555544443334456899999999999977655321 2234578999999999998877888887777
Q ss_pred CCCeEEEEEecCCC-Cchhhhhccc
Q 007848 505 DLPLSILIIGVGGA-DFKEMEILDA 528 (587)
Q Consensus 505 ~lPlSiiiVGvG~~-~f~~m~~ld~ 528 (587)
...+-|+.||||++ +-+.|+.+-+
T Consensus 155 ~~gv~i~~igiG~~~~~~~L~~iA~ 179 (281)
T 4hqf_A 155 DRGVKIAVFGIGQGINVAFNRFLVG 179 (281)
T ss_dssp HTTCEEEEEEESSSCCHHHHHHHTT
T ss_pred HCCCEEEEEeCCCccCHHHHHhhhC
Confidence 88899999999986 6666777764
No 99
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=98.08 E-value=3.9e-05 Score=71.55 Aligned_cols=149 Identities=14% Similarity=0.139 Sum_probs=95.2
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc-cCCCCcceeeecccCCCCCceeEEeCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY-DSDKRFPAWGFGARPIDGPVSHCFNLNGSN 427 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~y-d~d~~~~~~gFG~~~~~~~~~~~f~l~~~~ 427 (587)
.+++++.||-|+| |.. .++.....+-.++..+ .++-++-++.|+.. ....|+++.
T Consensus 7 ~~div~vlD~SgS------------M~~-----~~~~~~~~~~~~~~~~~~~~~~v~lv~f~~~-----~~~~~~l~~-- 62 (185)
T 3n2n_F 7 GFDLYFILDKSGS------------VLH-----HWNEIYYFVEQLAHKFISPQLRMSFIVFSTR-----GTTLMKLTE-- 62 (185)
T ss_dssp EEEEEEEEECSGG------------GGG-----GHHHHHHHHHHHHHHCCCTTEEEEEEEESSS-----EEEEEEEEC--
T ss_pred CeeEEEEEeCCCC------------hhh-----hHHHHHHHHHHHHHHhCCCCcEEEEEEEecC-----ceEEeccCC--
Confidence 4789999999996 331 1333333333333332 23456888888764 333566652
Q ss_pred CCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCHH--HHHHHHHHccC
Q 007848 428 SYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQ--ETKDALVKASD 505 (587)
Q Consensus 428 ~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~--~t~~~i~~as~ 505 (587)
..+.+.++-.+ ++....+|.|++..-|+.+.+..............++++||||..+|-. +..++...+..
T Consensus 63 ------~~~~~~~~i~~-l~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~ 135 (185)
T 3n2n_F 63 ------DREQIRQGLEE-LQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDLFFYSEREANRSRD 135 (185)
T ss_dssp ------CHHHHHHHHHH-HHTCCCCSCCCHHHHHHHHHHHHHHHHTTCBCEEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHH-HhhhcCCCCccHHHHHHHHHHHHhhccccCCCCCcEEEEEcCCCCCCCcccchHHHHHHHHH
Confidence 33444443332 3333568999999999999885532211223467899999999986654 34566666667
Q ss_pred CCeEEEEEecCCCCchhhhhccc
Q 007848 506 LPLSILIIGVGGADFKEMEILDA 528 (587)
Q Consensus 506 lPlSiiiVGvG~~~f~~m~~ld~ 528 (587)
..+.|..||||+.+-..|+.+-+
T Consensus 136 ~gi~i~~igvg~~~~~~L~~iA~ 158 (185)
T 3n2n_F 136 LGAIVYAVGVKDFNETQLARIAD 158 (185)
T ss_dssp TTEEEEEEECSSCCHHHHTTTSS
T ss_pred CCCEEEEEEeccCCHHHHHHHhC
Confidence 89999999999878777777663
No 100
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=98.05 E-value=2.5e-05 Score=72.67 Aligned_cols=148 Identities=15% Similarity=0.155 Sum_probs=95.2
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 428 (587)
.+++++.||-|+| |... .....+.+...+...+. ++-++-++.|+.. ....++++.
T Consensus 6 ~~dvv~vlD~SgS------------M~~~-~~~~~~~~~~~~~~~~~---~~~~v~lv~f~~~-----~~~~~~~~~--- 61 (182)
T 1shu_X 6 AFDLYFVLDKSGS------------VANN-WIEIYNFVQQLAERFVS---PEMRLSFIVFSSQ-----ATIILPLTG--- 61 (182)
T ss_dssp CEEEEEEEECSGG------------GGGG-HHHHHHHHHHHHHHCCC---TTEEEEEEEESSS-----EEEEEEEEC---
T ss_pred ceeEEEEEECCCC------------cccC-HHHHHHHHHHHHHHhcC---CCceEEEEEeCCC-----ceEEECCCC---
Confidence 3789999999996 3311 11122233333333333 4556888889765 223455542
Q ss_pred CCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCHH--HHHHHHHHccCC
Q 007848 429 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQ--ETKDALVKASDL 506 (587)
Q Consensus 429 ~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~--~t~~~i~~as~l 506 (587)
+.+.+.++ -+.+..+...|.|++...|+.+.+...... ......++++||||.-++-. ...+++..+...
T Consensus 62 -----~~~~~~~~-l~~l~~~~~~g~T~~~~al~~a~~~l~~~~--~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~ 133 (182)
T 1shu_X 62 -----DRGKISKG-LEDLKRVSPVGETYIHEGLKLANEQIQKAG--GLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSL 133 (182)
T ss_dssp -----CHHHHHHH-HHHHHTCCCCSCCCHHHHHHHHHHHHHHHT--GGGSCEEEEEEECCCCCTTHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHH-HHhcccCCCCCCchHHHHHHHHHHHHHhcc--CCCCCeEEEEECCCCcCCCCchhHHHHHHHHHhC
Confidence 22233222 223344567899999999999998776531 23456899999999976643 234555666678
Q ss_pred CeEEEEEecCCCCchhhhhccc
Q 007848 507 PLSILIIGVGGADFKEMEILDA 528 (587)
Q Consensus 507 PlSiiiVGvG~~~f~~m~~ld~ 528 (587)
.+.|..||||+.+-..|+.+-+
T Consensus 134 ~i~i~~igvg~~~~~~L~~ia~ 155 (182)
T 1shu_X 134 GASVYCVGVLDFEQAQLERIAD 155 (182)
T ss_dssp TCEEEEEECSSCCHHHHHHHSS
T ss_pred CCEEEEEeCCcCCHHHHHHHhC
Confidence 8999999999888888888763
No 101
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=98.03 E-value=3.1e-05 Score=72.25 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=94.0
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCC---CCcceeeecccCCCCCceeEEeCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSD---KRFPAWGFGARPIDGPVSHCFNLNG 425 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d---~~~~~~gFG~~~~~~~~~~~f~l~~ 425 (587)
.+.+++.||-|+| |. ...++.+...+..++..++.. -++-++.|+.. ....|+|+.
T Consensus 17 ~~divfvlD~SgS------------m~----~~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~~~-----~~~~~~l~~ 75 (178)
T 2xgg_A 17 QLDICFLIDSSGS------------IG----IQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTD-----VHLQWDLQS 75 (178)
T ss_dssp CEEEEEEEECCTT------------TC----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-----EEEEECTTS
T ss_pred CeeEEEEEECCCC------------CC----HHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCc-----eEEEEeCCC
Confidence 4899999999997 43 245777777777888877632 46888999875 223466643
Q ss_pred CCCCCcccCHHHHHHHHHhhhccee-ecCCCChHHHHHHHHHHHHhh-hccCCCceEEEEEEeCCCcCCHHHHHHHHHHc
Q 007848 426 SNSYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAGQS-LANHGQKYFVLLIITDGVVTDLQETKDALVKA 503 (587)
Q Consensus 426 ~~~~p~~~g~~~i~~~Y~~~~~~v~-~~gpt~f~~ii~~~~~~a~~~-~~~~~~~y~vlliltdG~i~d~~~t~~~i~~a 503 (587)
. .....+.+.++ +..++ ..|.|+....|+.|.+..... .......-.++++||||.-+|-.+..+++..+
T Consensus 76 ~----~~~~~~~~~~~----i~~l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~~~~~~~~~~~~l 147 (178)
T 2xgg_A 76 P----NAVDKQLAAHA----VLDMPYKKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDSDFRTVRAAKEI 147 (178)
T ss_dssp G----GGSCHHHHHHH----HHHCCCCCCCCCHHHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCCHHHHHSHHHHHH
T ss_pred C----CccCHHHHHHH----HHhCCCCCCCccHHHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCCCCccHHHHHHHH
Confidence 1 11133444443 33444 578999999999998864321 11123456899999999987754455555555
Q ss_pred cCCCeEEEEEecCCC
Q 007848 504 SDLPLSILIIGVGGA 518 (587)
Q Consensus 504 s~lPlSiiiVGvG~~ 518 (587)
.+..+.|+.||||+.
T Consensus 148 ~~~gi~v~~igvG~~ 162 (178)
T 2xgg_A 148 RELGGIVTVLAVGHY 162 (178)
T ss_dssp HHTTCEEEEEECC--
T ss_pred HHCCCEEEEEEcCCc
Confidence 567899999999976
No 102
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=97.93 E-value=4.2e-05 Score=73.52 Aligned_cols=153 Identities=14% Similarity=0.194 Sum_probs=98.9
Q ss_pred ceEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhh---cccccCCCCcceeeecccCCCCCceeEEeCC
Q 007848 348 FELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEV---LQVYDSDKRFPAWGFGARPIDGPVSHCFNLN 424 (587)
Q Consensus 348 ~~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~---~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~ 424 (587)
..+.+++.||-|+| |.. ..++.+...+..+ +..++..-++-++.|+.. ....|+++
T Consensus 14 ~~~div~vlD~SgS------------M~~----~~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~~~-----~~~~~~~~ 72 (223)
T 1q0p_A 14 GSMNIYLVLDGSDS------------IGA----SNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVKVS 72 (223)
T ss_dssp -CEEEEEEEECSTT------------TCH----HHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSS-----EEEEECTT
T ss_pred CceeEEEEEeCCCC------------Cch----HHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCc-----cceeeccc
Confidence 45899999999997 431 2355555555555 444555567999999875 22235443
Q ss_pred CCCCCCcccCHHHHHHHHHhhhccee-----ecCCCChHHHHHHHHHHHHhhhccC----CCceEEEEEEeCCCcC---C
Q 007848 425 GSNSYCEVEGIPGIMMAYTSALHNVN-----LAGPTLFGPVISNAALIAGQSLANH----GQKYFVLLIITDGVVT---D 492 (587)
Q Consensus 425 ~~~~~p~~~g~~~i~~~Y~~~~~~v~-----~~gpt~f~~ii~~~~~~a~~~~~~~----~~~y~vlliltdG~i~---d 492 (587)
.|.-...+.+.++ +..+. ..|.|++..-|+.|.+......... ...-.++++||||..+ |
T Consensus 73 ----~~~~~~~~~~~~~----i~~l~~~~~~~~g~T~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~ 144 (223)
T 1q0p_A 73 ----EADSSNADWVTKQ----LNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGD 144 (223)
T ss_dssp ----SGGGGCHHHHHHH----HHTCCTTSCSCTTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSSC
T ss_pred ----cCCCCCHHHHHHH----HHhcccccccCCCCccHHHHHHHHHHHhhccccccccccccCCeEEEEECCCCCCCCCC
Confidence 2333344444443 33444 4689999999999988765321111 2467899999999887 6
Q ss_pred HHHHHHHHHHc----------cCCCeEEEEEecCC-CCchhhhhcccC
Q 007848 493 LQETKDALVKA----------SDLPLSILIIGVGG-ADFKEMEILDAD 529 (587)
Q Consensus 493 ~~~t~~~i~~a----------s~lPlSiiiVGvG~-~~f~~m~~ld~d 529 (587)
.....+.+.+. ....+-|..||||. .+...|+.|-+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~igvG~~~~~~~L~~iA~~ 192 (223)
T 1q0p_A 145 PITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASK 192 (223)
T ss_dssp THHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCHHHHHHHSCC
T ss_pred hHHHHHHHHHHHhhhhhhhhcccCCcEEEEEEecCcCCHHHHHHHhcC
Confidence 66666666543 34678999999996 477777777643
No 103
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=97.85 E-value=7.9e-05 Score=70.30 Aligned_cols=148 Identities=22% Similarity=0.262 Sum_probs=95.0
Q ss_pred EEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc-cCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 007848 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY-DSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (587)
Q Consensus 350 ~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~y-d~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 428 (587)
+.+++.||-|+| |. ...++.+...+-.++..+ ..+-++-++.|+.. ....|+++...
T Consensus 10 ~div~vlD~SgS------------M~----~~~~~~~~~~~~~~~~~l~~~~~~v~lv~f~~~-----~~~~~~~~~~~- 67 (198)
T 1n3y_A 10 QDIVFLIDGSGS------------IS----SRNFATMMNFVRAVISQFQRPSTQFSLMQFSNK-----FQTHFTFEEFR- 67 (198)
T ss_dssp EEEEEEEECCTT------------SC----HHHHHHHHHHHHHHHTTSCTTTEEEEEEEESSS-----EEEEECHHHHH-
T ss_pred eeEEEEEECCCC------------CC----HHHHHHHHHHHHHHHHhcCCCCcEEEEEEeCCC-----ccEEEecCccC-
Confidence 899999999997 33 124566777777777777 46667889999876 22235442100
Q ss_pred CCcccCHHHHHHHHHhhhccee-ecCCCChHHHHHHHHHHH-HhhhccCCCceEEEEEEeCCCcC-CHHHHHHHHHHccC
Q 007848 429 YCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIA-GQSLANHGQKYFVLLIITDGVVT-DLQETKDALVKASD 505 (587)
Q Consensus 429 ~p~~~g~~~i~~~Y~~~~~~v~-~~gpt~f~~ii~~~~~~a-~~~~~~~~~~y~vlliltdG~i~-d~~~t~~~i~~as~ 505 (587)
. .+...+.+..+. ..|.|++...|+.|.+.. ............++++||||.-+ |.....+++..+..
T Consensus 68 -----~----~~~~~~~i~~l~~~~g~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~~ 138 (198)
T 1n3y_A 68 -----R----SSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADA 138 (198)
T ss_dssp -----H----CSSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHHH
T ss_pred -----C----HHHHHHHHhcCcCCCCCchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHHH
Confidence 0 011223444544 678999999999888432 22111124567899999999886 54434444555556
Q ss_pred CCeEEEEEecCCCC-----chhhhhccc
Q 007848 506 LPLSILIIGVGGAD-----FKEMEILDA 528 (587)
Q Consensus 506 lPlSiiiVGvG~~~-----f~~m~~ld~ 528 (587)
..+.|..||||... ...|+.+-+
T Consensus 139 ~gi~i~~igvG~~~~~~~~~~~L~~iA~ 166 (198)
T 1n3y_A 139 AGIIRYAIGVGLAFQNRNSWKELNDIAS 166 (198)
T ss_dssp TTCEEEEEEESGGGGSSTTHHHHHHHSC
T ss_pred CCCEEEEEEccccccccccHHHHHHHHc
Confidence 78899999999864 566666653
No 104
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=97.85 E-value=1.7e-05 Score=74.97 Aligned_cols=149 Identities=19% Similarity=0.226 Sum_probs=95.7
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccC-CCCcceeeecccCCCCCceeEEeCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDS-DKRFPAWGFGARPIDGPVSHCFNLNGSN 427 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~-d~~~~~~gFG~~~~~~~~~~~f~l~~~~ 427 (587)
.+.+++.||-|+| |. ...++.+...+..++..++. +-++-++.|+.. ....|+++...
T Consensus 5 ~~div~vlD~SgS------------m~----~~~~~~~k~~~~~~~~~l~~~~~~v~vv~f~~~-----~~~~~~l~~~~ 63 (194)
T 1mf7_A 5 DSDIAFLIDGSGS------------II----PHDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEE-----FRIHFTFKEFQ 63 (194)
T ss_dssp CEEEEEEEECCTT------------SC----HHHHHHHHHHHHHHHHHHCCTTEEEEEEEESSS-----EEEEECHHHHH
T ss_pred CeeEEEEEeCCCC------------CC----HHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCC-----ceEEEecCCcC
Confidence 3789999999997 33 23567777777777777763 346889999875 22346553200
Q ss_pred CCCcccCHHHHHHHHHhhhccee-ecCCCChHHHHHHHHHHHH-hhhccCCCceEEEEEEeCCCcC-CHHHHHHHHHHcc
Q 007848 428 SYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAG-QSLANHGQKYFVLLIITDGVVT-DLQETKDALVKAS 504 (587)
Q Consensus 428 ~~p~~~g~~~i~~~Y~~~~~~v~-~~gpt~f~~ii~~~~~~a~-~~~~~~~~~y~vlliltdG~i~-d~~~t~~~i~~as 504 (587)
+ .+. ..+.+..+. ..|.|+....|+.|.+... ...........++++||||..+ |.....+++.++.
T Consensus 64 -~-----~~~----~~~~i~~l~~~~g~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~ 133 (194)
T 1mf7_A 64 -N-----NPN----PRSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEAD 133 (194)
T ss_dssp -H-----SCC----HHHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHH
T ss_pred -C-----HHH----HHHHHHhCcCCCCCchHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHH
Confidence 0 011 233455665 4899999999998876322 1111123457899999999887 6543333344445
Q ss_pred CCCeEEEEEecCCCC-----chhhhhccc
Q 007848 505 DLPLSILIIGVGGAD-----FKEMEILDA 528 (587)
Q Consensus 505 ~lPlSiiiVGvG~~~-----f~~m~~ld~ 528 (587)
...+.|..||||+.. ...|+.+-+
T Consensus 134 ~~gi~v~~igvG~~~~~~~~~~~L~~iA~ 162 (194)
T 1mf7_A 134 REGVIRYVIGVGDAFRSEKSRQELNTIAS 162 (194)
T ss_dssp HTTEEEEEEEESGGGCSHHHHHHHHHHSC
T ss_pred HCCCEEEEEEecccccccccHHHHHHHhC
Confidence 578999999999863 466666653
No 105
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=97.83 E-value=0.00014 Score=69.24 Aligned_cols=147 Identities=9% Similarity=0.119 Sum_probs=96.8
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 425 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 425 (587)
.+.+++.||-|+| |. ...++++...+..++..++ .+-++-+..|+.. ....|+|+.
T Consensus 13 ~~divfvlD~SgS------------m~----~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs~~-----~~~~~~l~~ 71 (202)
T 1ijb_A 13 LLDLVFLLDGSSR------------LS----EAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDG-----SHAYIGLKD 71 (202)
T ss_dssp CEEEEEEEECBTT------------SC----HHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSS-----EEEEECTTC
T ss_pred cccEEEEEECCCC------------CC----HHHHHHHHHHHHHHHHhcccCCCceEEEEEEECCC-----ceEEEecCC
Confidence 5899999999997 43 2457788888888888887 3346888888765 223466652
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceee-cCC-CChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCH--HHHHHHHH
Q 007848 426 SNSYCEVEGIPGIMMAYTSALHNVNL-AGP-TLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL--QETKDALV 501 (587)
Q Consensus 426 ~~~~p~~~g~~~i~~~Y~~~~~~v~~-~gp-t~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~--~~t~~~i~ 501 (587)
. ...+.+.+ .+..++. +|. |+....|+.|.+..-.. ......-.++++||||.-++- ++..+++.
T Consensus 72 -~-----~~~~~~~~----~i~~l~~~gg~~T~~~~aL~~a~~~~~~~-~~r~~~~~~iillTDG~~~~~~~~~~~~~a~ 140 (202)
T 1ijb_A 72 -R-----KRPSELRR----IASQVKYAGSQVASTSEVLKYTLFQIFSK-IDRPEASRIALLLMASQEPQRMSRNFVRYVQ 140 (202)
T ss_dssp -C-----CCHHHHHH----HHHTCCCCCBSCCCHHHHHHHHHHHTSSS-CSCTTSEEEEEEEECCCCCGGGCTTHHHHHH
T ss_pred -C-----CCHHHHHH----HHHhCcCCCCCcCcHHHHHHHHHHHHhcc-CCCCCCCeEEEEEccCCCCccchHHHHHHHH
Confidence 1 12333433 3445554 453 99999999887532111 112345789999999987642 23444444
Q ss_pred HccCCCeEEEEEecCC-CCchhhhhcc
Q 007848 502 KASDLPLSILIIGVGG-ADFKEMEILD 527 (587)
Q Consensus 502 ~as~lPlSiiiVGvG~-~~f~~m~~ld 527 (587)
.+-+..+.|+.||||+ .+...|+.+-
T Consensus 141 ~l~~~gi~i~~igvG~~~~~~~L~~iA 167 (202)
T 1ijb_A 141 GLKKKKVIVIPVGIGPHANLKQIRLIE 167 (202)
T ss_dssp HHHHTTEEEEEEEESTTSCHHHHHHHH
T ss_pred HHHHCCCEEEEEecCCcCCHHHHHHHh
Confidence 4455789999999996 5777777775
No 106
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=97.80 E-value=0.00037 Score=67.28 Aligned_cols=137 Identities=21% Similarity=0.278 Sum_probs=93.3
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 425 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 425 (587)
.+.+++.||-|+| |. .++++...+..++..++ .+-++-++.|+.. +...|+++.
T Consensus 22 ~~div~vlD~SgS------------M~------~~~~~k~~~~~~~~~l~~~~~~~rv~lv~F~~~-----~~~~~~l~~ 78 (223)
T 2b2x_A 22 QLDIVIVLDGSNS------------IY------PWESVIAFLNDLLKRMDIGPKQTQVGIVQYGEN-----VTHEFNLNK 78 (223)
T ss_dssp CEEEEEEEECSTT------------CC------CHHHHHHHHHHHHTTSCCSTTSCCEEEEEESSS-----EEEEECTTT
T ss_pred cceEEEEEECCCC------------hh------hHHHHHHHHHHHHHhcccCCCCeEEEEEEeCCC-----ccEEEecCC
Confidence 4899999999997 32 16777777777887775 4567899999875 233567631
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceee-cC-CCChHHHHHHHHHHHHh-hhccCCCceEEEEEEeCCCcCCHHHHHHHHHH
Q 007848 426 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALVK 502 (587)
Q Consensus 426 ~~~~p~~~g~~~i~~~Y~~~~~~v~~-~g-pt~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~ 502 (587)
. ...+.++ +.+..+.. .| .|+....|+.|.+.... ........-.++++||||.-+|-....+++..
T Consensus 79 -~-----~~~~~~~----~~i~~l~~~gG~~T~~~~aL~~a~~~l~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~ 148 (223)
T 2b2x_A 79 -Y-----SSTEEVL----VAANKIVQRGGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNYRLKQVIQD 148 (223)
T ss_dssp -C-----CSHHHHH----HHHTTCCCCCCSSCCHHHHHHHHHHTTSSGGGTCCTTSEEEEEEEESSCCTTGGGHHHHHHH
T ss_pred -C-----CCHHHHH----HHHHhhhccCCCCccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHH
Confidence 1 2334444 34455553 46 49999999988774211 11112356789999999998876555566666
Q ss_pred ccCCCeEEEEEecCCC
Q 007848 503 ASDLPLSILIIGVGGA 518 (587)
Q Consensus 503 as~lPlSiiiVGvG~~ 518 (587)
+....+.|..||||..
T Consensus 149 ~~~~gi~v~~igvG~~ 164 (223)
T 2b2x_A 149 CEDENIQRFSIAILGH 164 (223)
T ss_dssp HHTTTEEEEEEEECGG
T ss_pred HHHCCCEEEEEEecCc
Confidence 6678899999999974
No 107
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.00017 Score=69.05 Aligned_cols=140 Identities=16% Similarity=0.190 Sum_probs=93.4
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 428 (587)
.+++++.||.|+| +...+. .++..+.|-..+..++..+. +.++-++.|+.. ....+|++.
T Consensus 11 ~~~iv~vlD~SgS---------M~~~d~--~~~r~~~ak~~~~~~~~~~~-~~~v~lv~F~~~-----~~~~~~~~~--- 70 (218)
T 3ibs_A 11 GVEVIIALDISNS---------MLAQDV--QPSRLEKAKRLISRLVDELD-NDKVGMIVFAGD-----AFTQLPITS--- 70 (218)
T ss_dssp CCEEEEEEECSGG---------GGCCSS--SSCHHHHHHHHHHHHHHTCS-SCEEEEEEESSS-----EEEEEEEES---
T ss_pred CCcEEEEEECCcC---------cccccC--CcCHHHHHHHHHHHHHHhCC-CCeEEEEEECCC-----ceEeCCCCC---
Confidence 4789999999995 332221 35788888888888888876 456999999875 233466543
Q ss_pred CCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCHHHHHHHHHHccCCCe
Q 007848 429 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKASDLPL 508 (587)
Q Consensus 429 ~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as~lPl 508 (587)
..+.+.++-...-......|.|++..-|+.|.+.... ......++++||||..++- ...+++..+....+
T Consensus 71 -----~~~~~~~~l~~l~~~~~~~g~T~l~~al~~a~~~l~~----~~~~~~~ivllTDG~~~~~-~~~~~~~~~~~~~i 140 (218)
T 3ibs_A 71 -----DYISAKMFLESISPSLISKQGTAIGEAINLATRSFTP----QEGVGRAIIVITDGENHEG-GAVEAAKAAAEKGI 140 (218)
T ss_dssp -----CHHHHHHHHHTCCGGGCCSCSCCHHHHHHHHHTTSCS----CSSCCEEEEEEECCTTCCS-CHHHHHHHHHTTTE
T ss_pred -----CHHHHHHHHHhcCcccCCCCCCcHHHHHHHHHHHHhh----CCCCCcEEEEEcCCCCCCC-cHHHHHHHHHhcCC
Confidence 2233333222222233447899999888887654332 2345679999999987643 34455555566789
Q ss_pred EEEEEecCCC
Q 007848 509 SILIIGVGGA 518 (587)
Q Consensus 509 SiiiVGvG~~ 518 (587)
.|..||||..
T Consensus 141 ~v~~igig~~ 150 (218)
T 3ibs_A 141 QVSVLGVGMP 150 (218)
T ss_dssp EEEEEEESCT
T ss_pred EEEEEEecCC
Confidence 9999999974
No 108
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=97.78 E-value=0.00027 Score=76.25 Aligned_cols=154 Identities=15% Similarity=0.102 Sum_probs=107.5
Q ss_pred cceEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCC
Q 007848 347 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGS 426 (587)
Q Consensus 347 g~~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~ 426 (587)
+..+.+++.||.|+| |.. ..+..+.+..++..++..+.++-.+-++.|+.. ....||++..
T Consensus 75 ~~~~dvv~VLD~SGS------------M~~--~~~rl~~ak~a~~~ll~~L~~~drv~lV~Fs~~-----a~~~~p~t~~ 135 (464)
T 4fx5_A 75 GSENVEVIIIDCSGS------------MDY--PRTKMMAAKEATKVAIDTLTDGAFFAVVAGTEG-----ARVVYPTGGQ 135 (464)
T ss_dssp -CCEEEEEEEECCGG------------GGT--TTHHHHHHHHHHHHHHHHSCTTCEEEEEEESSS-----EEEEESSSSS
T ss_pred CCCceEEEEEEcCcc------------cCC--CCchHHHHHHHHHHHHHhCCCCCEEEEEEEcCc-----eEEEecCCcc
Confidence 567999999999996 331 136677888888888888877778999999875 2335665421
Q ss_pred CCCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCH-HHHHHHHHHccC
Q 007848 427 NSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL-QETKDALVKASD 505 (587)
Q Consensus 427 ~~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~-~~t~~~i~~as~ 505 (587)
..... ..=.+.-.+.+..++..|-|++..-|+.+.+.... ....-.++++||||..++. .+.+....++..
T Consensus 136 l~~~~----~~~~~~l~~~I~~L~~~GgT~l~~aL~~A~~~l~~----~~~~~~~IILLTDG~~~~~~~~~l~~~~~a~~ 207 (464)
T 4fx5_A 136 LLRAD----YQSRAAAKEAVGRLHANGGTAMGRWLAQAGRIFDT----APSAIKHAILLTDGKDESETPADLARAIQSSI 207 (464)
T ss_dssp CEECS----HHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHTT----CTTSEEEEEEEESSCCTTSCHHHHHHHHHHHT
T ss_pred cccCC----HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhc----CCCCCCEEEEEcCCCCCCCChHHHHHHHHHhc
Confidence 10011 12234445566778889999999999999887653 2344578999999997643 334555555667
Q ss_pred CCeEEEEEecCCC-Cchhhhhcc
Q 007848 506 LPLSILIIGVGGA-DFKEMEILD 527 (587)
Q Consensus 506 lPlSiiiVGvG~~-~f~~m~~ld 527 (587)
..+.|..||+|.+ +...|+.|-
T Consensus 208 ~~i~i~tiGiG~~~d~~~L~~IA 230 (464)
T 4fx5_A 208 GNFTADCRGIGEDWEPKELRKIA 230 (464)
T ss_dssp TTCEEEEEEESSSSCHHHHHHHH
T ss_pred CCCeEEEEEeCCccCHHHHHHHH
Confidence 7899999999964 777787776
No 109
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=97.77 E-value=0.0005 Score=65.22 Aligned_cols=167 Identities=16% Similarity=0.166 Sum_probs=108.2
Q ss_pred EEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEeCCCCC
Q 007848 351 NFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFNLNGSN 427 (587)
Q Consensus 351 ~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~y---d~d~~~~~~gFG~~~~~~~~~~~f~l~~~~ 427 (587)
.++++||.|.| +...+ ..+|..+.|..++..++..| .+.-++-+..|++... . -..|++.+
T Consensus 4 ~lvlvlD~S~S---------M~~~D--~~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a--~--~~~plT~d- 67 (192)
T 2x5n_A 4 ATMILIDNSEW---------MINGD--YIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSP--Q--VLSTLTRD- 67 (192)
T ss_dssp EEEEEECCSGG---------GGCTT--SSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSC--C--EEEEEESC-
T ss_pred EEEEEEECCHh---------hccCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCc--E--EecCCCCC-
Confidence 57899999995 44333 24788888888777766544 3455688888877411 1 12355543
Q ss_pred CCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceE-EEEEEeCCCcCCHHHHHHHHHHccCC
Q 007848 428 SYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYF-VLLIITDGVVTDLQETKDALVKASDL 506 (587)
Q Consensus 428 ~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~-vlliltdG~i~d~~~t~~~i~~as~l 506 (587)
.+.-...+..+.+.|.|.+..-|..|.+..++.. ...... |+|+++|+.-.|..+..+++..+.+.
T Consensus 68 -----------~~~i~~~L~~l~~~g~t~l~~aL~~A~~~l~~~~--~~~~~~riiil~~~~~~~~~~~~~~~a~~lk~~ 134 (192)
T 2x5n_A 68 -----------YGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRE--NKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKN 134 (192)
T ss_dssp -----------HHHHHHHHTTCCCCSCCCHHHHHHHHHHHHHTCS--CTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHT
T ss_pred -----------HHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhcc--ccCCCceEEEEEECCCCCCchhHHHHHHHHHHC
Confidence 3444455666888999999999999988776532 112333 55555555445677777788888888
Q ss_pred CeEEEEEecCCCCchh-hhhcccCCCcccccCCCCccccceeeeeeCcccCC
Q 007848 507 PLSILIIGVGGADFKE-MEILDADKGERLESSTGRVASRDIVQFVPLKDVQN 557 (587)
Q Consensus 507 PlSiiiVGvG~~~f~~-m~~ld~d~~~~l~~~~g~~~~rd~vqFv~~~~~~~ 557 (587)
.+.|.+||+|..+... |+.|- +. .. + -|+-+||...+..+
T Consensus 135 gi~v~~Ig~G~~~~~~~l~~la-~~-~n---~------~~~s~~~~~~~~~~ 175 (192)
T 2x5n_A 135 NVAIDIIHIGELQNESALQHFI-DA-AN---S------SDSCHLVSIPPSPQ 175 (192)
T ss_dssp TEEEEEEEESCC---CHHHHHH-HH-HC---S------TTCCEEEEECCCSS
T ss_pred CCEEEEEEeCCCCccHHHHHHH-Hh-cc---C------CCceEEEEecCcch
Confidence 9999999999876421 77665 22 11 1 15778887666653
No 110
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=97.75 E-value=0.0003 Score=66.67 Aligned_cols=136 Identities=18% Similarity=0.141 Sum_probs=92.1
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 425 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 425 (587)
.+.+++.||-|+| |. .++++...+..++..++ .+-++-++.|+.. ....|+|+
T Consensus 6 ~~div~vlD~SgS------------m~------~~~~~k~~~~~~~~~l~~~~~~~rvglv~f~~~-----~~~~~~l~- 61 (200)
T 1v7p_C 6 LIDVVVVCDESNS------------IY------PWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANN-----PRVVFNLN- 61 (200)
T ss_dssp CEEEEEEEECCTT------------CC------CHHHHHHHHHHHHHTSCBSTTSEEEEEEEESSS-----EEEEECTT-
T ss_pred cccEEEEEECCCC------------cc------cHHHHHHHHHHHHHhcCCCCCceEEEEEEECCC-----ceEEEeCC-
Confidence 3899999999997 32 16777777777888776 3556888889775 22357776
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceee-cC-CCChHHHHHHHHHHHH-hhhccCCCceEEEEEEeCCCcCCHHHHHHHHHH
Q 007848 426 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIAG-QSLANHGQKYFVLLIITDGVVTDLQETKDALVK 502 (587)
Q Consensus 426 ~~~~p~~~g~~~i~~~Y~~~~~~v~~-~g-pt~f~~ii~~~~~~a~-~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~ 502 (587)
+. ...+.++++ +..+.. .| .|+....|+.|.+... .........-.++++||||.-+|-....+++..
T Consensus 62 ~~-----~~~~~~~~~----i~~l~~~~G~~T~~~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~~~~~~~~~~~~ 132 (200)
T 1v7p_C 62 TY-----KTKEEMIVA----TSQTSQYGGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSMLKAVIDQ 132 (200)
T ss_dssp TC-----SSHHHHHHH----HHHCCCCCCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCSCGGGHHHHHHH
T ss_pred Cc-----CCHHHHHHH----HHhhhccCCCCCcHHHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCCCcccHHHHHHH
Confidence 21 234444443 344544 35 5999999999887422 111112356789999999999876555555556
Q ss_pred ccCCCeEEEEEecCC
Q 007848 503 ASDLPLSILIIGVGG 517 (587)
Q Consensus 503 as~lPlSiiiVGvG~ 517 (587)
+....+.|..||||.
T Consensus 133 ~~~~gi~i~~igvg~ 147 (200)
T 1v7p_C 133 CNHDNILRFGIAVLG 147 (200)
T ss_dssp HHHTTEEEEEEEECH
T ss_pred HHHCCCEEEEEEecc
Confidence 666789999999963
No 111
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.00044 Score=68.82 Aligned_cols=146 Identities=10% Similarity=0.079 Sum_probs=101.0
Q ss_pred EEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 007848 352 FMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (587)
Q Consensus 352 ~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~---yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 428 (587)
++|+||-|.|=. ..+..+|.++.+..++-.++.. -++.-.+-+..|++..+ .+ .-+++.+
T Consensus 6 tViviD~S~SM~-----------~~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~--~v--l~plT~D-- 68 (268)
T 4b4t_W 6 TVLVIDNSEYSR-----------NGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANP--RV--LSTFTAE-- 68 (268)
T ss_dssp EEEEECCSSTTS-----------STTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSC--EE--EEEEESC--
T ss_pred EEEEEECCHHHh-----------CCCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcc--ee--ccCCcch--
Confidence 688999999621 1223578888777777666664 35566788888876411 11 1233332
Q ss_pred CCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcC-CHHHHHHHHHHccCCC
Q 007848 429 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT-DLQETKDALVKASDLP 507 (587)
Q Consensus 429 ~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~-d~~~t~~~i~~as~lP 507 (587)
. ..-..+|..++..|-|+++.-|+.|...++... .+..-..++|+|||.+. |-++.++++..+.+.-
T Consensus 69 ------~----~~il~aL~~l~~~G~T~l~~gL~~A~~aLk~~~--~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~g 136 (268)
T 4b4t_W 69 ------F----GKILAGLHDTQIEGKLHMATALQIAQLTLKHRQ--NKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNN 136 (268)
T ss_dssp ------H----HHHHHHHTTCCCCSCCCHHHHHHHHHHHHHTCS--CTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHT
T ss_pred ------H----HHHHHHhhhcCcCCCCChHHHHHHHHHHHHhcc--cCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcC
Confidence 2 233456788999999999999999999888653 44556667888888774 5567778888888878
Q ss_pred eEEEEEecCCC--Cchhhhhc
Q 007848 508 LSILIIGVGGA--DFKEMEIL 526 (587)
Q Consensus 508 lSiiiVGvG~~--~f~~m~~l 526 (587)
++|-|||+|.+ +-+.|+.|
T Consensus 137 I~v~vIgFG~~~~n~~kLe~l 157 (268)
T 4b4t_W 137 VAVDIINFGEIEQNTELLDEF 157 (268)
T ss_dssp EEEEEEEESSCCSSCCHHHHH
T ss_pred CEEEEEEeCCCccchHHHHHH
Confidence 88888888854 55667776
No 112
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=97.62 E-value=0.00064 Score=65.06 Aligned_cols=137 Identities=20% Similarity=0.285 Sum_probs=91.4
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 425 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 425 (587)
.+.+++.||-|+| |. .++.+...+..++..++ .+-++-++.|+.. +...|+++.
T Consensus 7 ~~div~vlD~SgS------------m~------~~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~~~-----~~~~~~l~~ 63 (213)
T 1pt6_A 7 QLDIVIVLDGSNS------------IY------PWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGEN-----VTHEFNLNK 63 (213)
T ss_dssp CEEEEEEEECCTT------------CC------CHHHHHHHHHHHHTTSCBSTTSBEEEEEEESSS-----EEEEECTTT
T ss_pred CccEEEEEECCCC------------hh------hHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCC-----ccEEEeccc
Confidence 4889999999997 32 15666666777777665 4566889999875 223566631
Q ss_pred CCCCCcccCHHHHHHHHHhhhcceee-cC-CCChHHHHHHHHHHH-HhhhccCCCceEEEEEEeCCCcCCHHHHHHHHHH
Q 007848 426 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIA-GQSLANHGQKYFVLLIITDGVVTDLQETKDALVK 502 (587)
Q Consensus 426 ~~~~p~~~g~~~i~~~Y~~~~~~v~~-~g-pt~f~~ii~~~~~~a-~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~ 502 (587)
....+.+++ .+..+.. .| .|+....|+.|.+.. ............++++||||.-+|-....+++..
T Consensus 64 ------~~~~~~~~~----~i~~l~~~~G~~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~ 133 (213)
T 1pt6_A 64 ------YSSTEEVLV----AAKKIVQRGGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQD 133 (213)
T ss_dssp ------CSSHHHHHH----HHHTCCCCCCSSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESSCCSCSHHHHHHHHH
T ss_pred ------cCCHHHHHH----HHHhccCCCCCcccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHH
Confidence 123444444 3444443 56 499999999887642 1111113456789999999998876555556666
Q ss_pred ccCCCeEEEEEecCCC
Q 007848 503 ASDLPLSILIIGVGGA 518 (587)
Q Consensus 503 as~lPlSiiiVGvG~~ 518 (587)
+.+..+.|..||||..
T Consensus 134 ~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 134 CEDENIQRFSIAILGS 149 (213)
T ss_dssp HHHTTEEEEEEEECHH
T ss_pred HHHCCCEEEEEEeccc
Confidence 6667899999999964
No 113
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=97.61 E-value=0.00047 Score=64.64 Aligned_cols=146 Identities=14% Similarity=0.197 Sum_probs=95.7
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCC---CCcceeeecccCCCCCceeEEeCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSD---KRFPAWGFGARPIDGPVSHCFNLNG 425 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d---~~~~~~gFG~~~~~~~~~~~f~l~~ 425 (587)
.+.+++.||-|+| |. .+.++.+...+..++..++.. -++-++.|+.. +...|+++.
T Consensus 5 ~~div~vlD~SgS------------m~----~~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f~~~-----~~~~~~l~~ 63 (189)
T 1atz_A 5 PLDVILLLDGSSS------------FP----ASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSI-----TTIDVPWNV 63 (189)
T ss_dssp CEEEEEEEECSSS------------SC----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-----EEEEECTTC
T ss_pred ceeEEEEEeCCCC------------CC----hhhHHHHHHHHHHHHHhcCcCCCCeEEEEEEECCc-----ceEEEecCC
Confidence 4789999999997 43 256777777777777777522 45888899765 223466642
Q ss_pred CCCCCcccCHHHHHHHHHhhhccee-ecCCCChHHHHHHHHHHHHhhhc-cCCCceEEEEEEeCCCc-CCHHHHHHHHHH
Q 007848 426 SNSYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAGQSLA-NHGQKYFVLLIITDGVV-TDLQETKDALVK 502 (587)
Q Consensus 426 ~~~~p~~~g~~~i~~~Y~~~~~~v~-~~gpt~f~~ii~~~~~~a~~~~~-~~~~~y~vlliltdG~i-~d~~~t~~~i~~ 502 (587)
....+.+.++. ..+. .+|.|+...-|+.|.+....... .......+++|||||.. +|..+..+.+.
T Consensus 64 ------~~~~~~~~~~i----~~l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~~~~~~~~~~~~- 132 (189)
T 1atz_A 64 ------VPEKAHLLSLV----DVMQREGGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSVDSVDAAADAAR- 132 (189)
T ss_dssp ------CCCHHHHHHHH----HTCCCCCCCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCSSCCHHHHHHHH-
T ss_pred ------CCCHHHHHHHH----HhCcCCCCcchHHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCCchHHHHHHHHH-
Confidence 12334444443 3344 36889999999999887654211 12334677888888865 44444444444
Q ss_pred ccCCCeEEEEEecCC-CCchhhhhccc
Q 007848 503 ASDLPLSILIIGVGG-ADFKEMEILDA 528 (587)
Q Consensus 503 as~lPlSiiiVGvG~-~~f~~m~~ld~ 528 (587)
...+.|..||||+ .+-..|+.+-+
T Consensus 133 --~~gi~v~~igvG~~~~~~~L~~iA~ 157 (189)
T 1atz_A 133 --SNRVTVFPIGIGDRYDAAQLRILAG 157 (189)
T ss_dssp --HTTEEEEEEEESSSSCHHHHHHHTG
T ss_pred --HCCCEEEEEEcCCcCCHHHHHHHHC
Confidence 5689999999998 47777777763
No 114
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=97.52 E-value=1.2e-05 Score=75.67 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=88.4
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 428 (587)
..++++.||-|+| |... +...-.+++..+..-+ +...-.+-++.|+...... .+|+.
T Consensus 5 ~~~vv~vlD~SgS------------M~~~-~~~~~k~~~~~~~~~~--~~~~~~v~lv~f~~~~~~~----~~~~~---- 61 (189)
T 2x31_A 5 DRVLIFAVDASGS------------AAVA-RLSEAKGAVELLLGRA--YAARDHVSLITFRGTAAQV----LLQPS---- 61 (189)
T ss_dssp CCEEEEEEECCTT------------SCC---CHHHHHHHHHHHHHS--CTTTSCCCEEEESBSCCCB----CTTTC----
T ss_pred CeEEEEEEECCCC------------CCch-HHHHHHHHHHHHHHHh--cCCCcEEEEEEECCCCceE----ecCCC----
Confidence 4688999999997 3322 3344444444443322 3556679999998631110 12221
Q ss_pred CCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCH-----------HHHH
Q 007848 429 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL-----------QETK 497 (587)
Q Consensus 429 ~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~-----------~~t~ 497 (587)
...+.+ .+.+..+...|-|++.+-|+.+.+...+.. ....-.++++||||..++- ++..
T Consensus 62 ----~~~~~~----~~~i~~l~~~g~T~~~~al~~a~~~l~~~~--~~~~~~~ivliTDG~~~~~~~~~~~~~~~~~~~~ 131 (189)
T 2x31_A 62 ----RSLTQT----KRQLQGLPGGGGTPLASGMEMAMVTAKQAR--SRGMTPTIALLTDGRGNIALDGTANRELAGEQAT 131 (189)
T ss_dssp ----SCHHHH----HHHHHHCCCCBCCCCHHHHHHHHHHHHTCT--TTCSSEEEEECCBSCCSSCCTHHHHHGGGTCCCE
T ss_pred ----CCHHHH----HHHHhcCCCCCCCCHHHHHHHHHHHHHhcc--CCCCceEEEEECCCCCCCCCCccccccchhHHHH
Confidence 123333 445566778899999999999998877532 2234668999999987542 1112
Q ss_pred HHHHHccCCCeEEEEEecCCCCchhhhhcc
Q 007848 498 DALVKASDLPLSILIIGVGGADFKEMEILD 527 (587)
Q Consensus 498 ~~i~~as~lPlSiiiVGvG~~~f~~m~~ld 527 (587)
+++..+....+.|+.||+|..+...|+.|-
T Consensus 132 ~~~~~~~~~gi~v~~ig~g~~~~~~L~~iA 161 (189)
T 2x31_A 132 KVARAIRASGMPAVIIDTAMRPNPALVDLA 161 (189)
T ss_dssp EEEECTGGGGSCCTHHHHHHSSCSSSCSTT
T ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence 222223345678888999987665555554
No 115
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=97.48 E-value=0.00065 Score=59.03 Aligned_cols=70 Identities=20% Similarity=0.210 Sum_probs=50.5
Q ss_pred CCCcEEEEEEEcCCCceeeEEec-ceecCCCCCceee-ceEEeeecCCCCCcEEEEEEeccCCCCCceeEEEEEechhhh
Q 007848 221 RNDPFLVISKIVESGTHIPVCKT-EVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLE 298 (587)
Q Consensus 221 ~sDPyv~v~~~~~~g~~~~~~kT-~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~ 298 (587)
..|||+.+.+... ......+| ...++|..|.||+ |.-.+. ..+.|.|.|++-.. +|+..|++.+.+|.
T Consensus 26 ~lDPy~aV~vdE~--~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh~a~----~fvAn~tV~~edL~ 95 (126)
T 1yrk_A 26 ANQPFCAVKMKEA--LSTERGKTLVQKKPTMYPEWKSTFDAHIY----EGRVIQIVLMRAAE----EPVSEVTVGVSVLA 95 (126)
T ss_dssp SCCCEEEEEEEEE--EEETTEEEEECCSCCBCCCTTCEEEEECC----TTCEEEEEEEEETT----EEEEEEEEEHHHHH
T ss_pred cCCceEEEEeeee--EEcccceeecccCCCCCcCccceEEeeee----CCEEEEEEEEcCCC----CeeeEEEEEHHHHH
Confidence 5799999988431 00002255 5667899999998 654443 26899999995333 89999999999998
Q ss_pred hc
Q 007848 299 KL 300 (587)
Q Consensus 299 ~~ 300 (587)
+.
T Consensus 96 ~~ 97 (126)
T 1yrk_A 96 ER 97 (126)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 116
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=97.43 E-value=0.00041 Score=75.52 Aligned_cols=155 Identities=16% Similarity=0.215 Sum_probs=103.6
Q ss_pred CcceEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEe
Q 007848 346 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFN 422 (587)
Q Consensus 346 ~g~~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~y---d~d~~~~~~gFG~~~~~~~~~~~f~ 422 (587)
....+++++.||-|+| |. ...+++|...+..++..+ ..+-++-++.|+.. ....|+
T Consensus 6 ~~~~~divfvlD~SgS------------M~----~~~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f~~~-----~~~~~~ 64 (509)
T 2odp_A 6 RSGHLNLYLLLDASQS------------VS----ENDFLIFKESASLMVDRIFSFEINVSVAIITFASE-----PKVLMS 64 (509)
T ss_dssp SSSEEEEEEEEECSTT------------SC----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEESSS-----EEEEEC
T ss_pred CCCCeeEEEEEeCCCc------------cc----hhhHHHHHHHHHHHHHHhhccCCCceEEEEEccCC-----CceeEe
Confidence 3457899999999997 43 245677777777777666 56667888999775 223466
Q ss_pred CCCCCCCCcccCHHHHHHHHHhhhcceeec-----CCCChHHHHHHHHHHHHhhhccCC-------CceEEEEEEeCCCc
Q 007848 423 LNGSNSYCEVEGIPGIMMAYTSALHNVNLA-----GPTLFGPVISNAALIAGQSLANHG-------QKYFVLLIITDGVV 490 (587)
Q Consensus 423 l~~~~~~p~~~g~~~i~~~Y~~~~~~v~~~-----gpt~f~~ii~~~~~~a~~~~~~~~-------~~y~vlliltdG~i 490 (587)
++- +.-...+.+.+ .+..++.. |.|+....|+.|.+..+....... ..-.++++||||.-
T Consensus 65 l~~----~~~~~~~~~~~----~l~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~ 136 (509)
T 2odp_A 65 VLN----DNSRDMTEVIS----SLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKS 136 (509)
T ss_dssp TTS----GGGGCHHHHHH----HHHTCCGGGGTTCCSCCHHHHHHHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCC
T ss_pred ccC----CCCCCHHHHHH----HHHhcccccCCCCCCccHHHHHHHHHHHHhhcccccccccccccccceEEEEECCCCc
Confidence 532 22223444444 44455544 789999999999887654321111 24579999999976
Q ss_pred CC---HHHHHHHHHHc------cCCCeEEEEEecCC--CCchhhhhcccC
Q 007848 491 TD---LQETKDALVKA------SDLPLSILIIGVGG--ADFKEMEILDAD 529 (587)
Q Consensus 491 ~d---~~~t~~~i~~a------s~lPlSiiiVGvG~--~~f~~m~~ld~d 529 (587)
++ ..+..+.+.+. .+..+.|..||||+ .+...|+.|-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~~~~~~~L~~iA~~ 186 (509)
T 2odp_A 137 NMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGSK 186 (509)
T ss_dssp CSSSCTHHHHHHHHHHTTCCSTTGGGEEEEEEEESSSCCCHHHHHHHSCC
T ss_pred cCCCChhHHHHHHHHHhhccccccCceEEEEEEcCCCcccHHHHHhhccC
Confidence 53 45555555542 25678999999998 588888888743
No 117
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.39 E-value=0.00061 Score=59.98 Aligned_cols=70 Identities=19% Similarity=0.166 Sum_probs=50.4
Q ss_pred CCCcEEEEEEEcCCCceeeEEec-ceecCCCCCceee-ceEEeeecCCCCCcEEEEEEeccCCCCCceeEEEEEechhhh
Q 007848 221 RNDPFLVISKIVESGTHIPVCKT-EVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLE 298 (587)
Q Consensus 221 ~sDPyv~v~~~~~~g~~~~~~kT-~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d~~~~dd~IG~~~i~l~~l~ 298 (587)
..|||+.|.+... ......+| ...++|..|+||+ |.-.+. ..+.|.|.|++ +.. +|+..|++.+.+|.
T Consensus 31 ~lDPY~aV~VdE~--~~te~gqtl~~KkkT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh-~a~---~fVAn~tV~~edL~ 100 (138)
T 2enj_A 31 AVNPYCAVLVKEY--VESENGQMYIQKKPTMYPPWDSTFDAHIN----KGRVMQIIVKG-KNV---DLISETTVELYSLA 100 (138)
T ss_dssp CCCCEEEEEEEEE--EEETTEEEEEEEEEEECCCSSSEEEECCC----SSCEEEEEEEC-SSC---SCCEEEEEESHHHH
T ss_pred cCCceEEEEeeee--eeccCceeecccCCCCCccccceEeeeEE----CCeEEEEEEEc-CCC---CeeeEEEEEHHHHH
Confidence 5799999988431 00112566 5666789999998 554433 26899999994 322 89999999999998
Q ss_pred hc
Q 007848 299 KL 300 (587)
Q Consensus 299 ~~ 300 (587)
+.
T Consensus 101 ~~ 102 (138)
T 2enj_A 101 ER 102 (138)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 118
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=97.26 E-value=0.0013 Score=71.23 Aligned_cols=155 Identities=12% Similarity=0.144 Sum_probs=100.0
Q ss_pred EEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEeCCCC
Q 007848 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFNLNGS 426 (587)
Q Consensus 350 ~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~y---d~d~~~~~~gFG~~~~~~~~~~~f~l~~~ 426 (587)
+.+++.||-|+| |. .+.++.|...+..++..+ ..+-++-++.|+.. ....++++
T Consensus 2 ~div~vlD~SgS------------M~----~~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~~~-----~~~~~~~~-- 58 (497)
T 1rrk_A 2 MNIYLVLDGSDS------------IG----ASNFTGAKKVLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVKVS-- 58 (497)
T ss_dssp EEEEEEEECSTT------------TC----HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-----EEEEECTT--
T ss_pred eeEEEEEECCCC------------cc----hhhHHHHHHHHHHHHHHhhccCCCceEEEEEecCC-----ceEeeccc--
Confidence 689999999997 43 255666666666666654 44567889999864 22234432
Q ss_pred CCCCcccCHHHHHHHHHhhhcce-eecCCCChHHHHHHHHHHHHhhhc----cCCCceEEEEEEeCCCcC---CHHHHHH
Q 007848 427 NSYCEVEGIPGIMMAYTSALHNV-NLAGPTLFGPVISNAALIAGQSLA----NHGQKYFVLLIITDGVVT---DLQETKD 498 (587)
Q Consensus 427 ~~~p~~~g~~~i~~~Y~~~~~~v-~~~gpt~f~~ii~~~~~~a~~~~~----~~~~~y~vlliltdG~i~---d~~~t~~ 498 (587)
.|.-...+.+.++-.+.-..- ...|.|+....|+.|.+....... .....-.++++||||.-+ |..+..+
T Consensus 59 --~~~~~~~~~~~~~l~~l~~~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~ 136 (497)
T 1rrk_A 59 --EADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVID 136 (497)
T ss_dssp --SGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC------CGGGCEEEEEEEECSCCCSSSCTHHHHH
T ss_pred --cccccCHHHHHHHHHhCcCccccccCccCHHHHHHHHHHHhhhhhccccccccccceEEEEEeCCCcccCCChhHHHH
Confidence 344445556655544332211 256789999999999887632110 012356799999999876 6667777
Q ss_pred HHHHcc----------CCCeEEEEEecCC-CCchhhhhcccC
Q 007848 499 ALVKAS----------DLPLSILIIGVGG-ADFKEMEILDAD 529 (587)
Q Consensus 499 ~i~~as----------~lPlSiiiVGvG~-~~f~~m~~ld~d 529 (587)
.+.+.. ...+.|..||||+ .+...|+.|-+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~i~v~~igvG~~~~~~~L~~iA~~ 178 (497)
T 1rrk_A 137 EIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASK 178 (497)
T ss_dssp HHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHHHHHHHSCC
T ss_pred HHHHHhhhhcccccchhcCeeEEEecCCCccCHHHHHHHhcC
Confidence 766552 2278899999997 477777777643
No 119
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=97.18 E-value=0.0011 Score=62.93 Aligned_cols=143 Identities=15% Similarity=0.202 Sum_probs=92.6
Q ss_pred ceEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEeCC
Q 007848 348 FELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLN 424 (587)
Q Consensus 348 ~~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~ 424 (587)
..+.+++.||-|+| |. ...++++...+..++..++ ..-++-+..|+.. +...|+|+
T Consensus 20 ~~~DivfvlD~S~S------------m~----~~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs~~-----~~~~~~l~ 78 (199)
T 3zqk_A 20 MVLDVAFVLEGSDK------------IG----EADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYM-----VTVEYPFS 78 (199)
T ss_dssp CCCEEEEEEECCTT------------TC----HHHHHHHHHHHHHHHHHSCBSTTSBEEEEEEESSS-----EEEEECTT
T ss_pred CCcCEEEEEECCCC------------CC----HHHHHHHHHHHHHHHHhcCCCCCceEEEEEEECCc-----ccEEEecC
Confidence 45889999999986 33 2456777777777888775 4456888888764 33457765
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceee-cCC-CChHHHHHHHHHHHHh-hhccCCCceEEEEEEeCCCcCCHHHHHHHHH
Q 007848 425 GSNSYCEVEGIPGIMMAYTSALHNVNL-AGP-TLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALV 501 (587)
Q Consensus 425 ~~~~~p~~~g~~~i~~~Y~~~~~~v~~-~gp-t~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdG~i~d~~~t~~~i~ 501 (587)
. ....+.+.++- ..++. +|+ |+...-|+.|.+.... ..........++++||||...|--.
T Consensus 79 ~------~~~~~~~~~~i----~~l~~~gg~~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~d~v~------ 142 (199)
T 3zqk_A 79 E------AQSKGDILQRL----REIRYQGGNRTNTGLALRYLSDHSFLVSQGDREQAPNLVYMVTGNPASDEIK------ 142 (199)
T ss_dssp S------CCCHHHHHHHH----HHCCCCCCSCCCHHHHHHHCCCCCTCGGGTCCTTSCEEEEEEECSCCSSCCC------
T ss_pred C------cCCHHHHHHHH----HhCcCCCCCcChHHHHHHHHHHHhhCcccCCCCCCCeEEEEEeCCCCchHHH------
Confidence 2 12344555443 33443 454 9988888877653211 1111234567999999998755311
Q ss_pred HccCCCeEEEEEecC-CCCchhhhhccc
Q 007848 502 KASDLPLSILIIGVG-GADFKEMEILDA 528 (587)
Q Consensus 502 ~as~lPlSiiiVGvG-~~~f~~m~~ld~ 528 (587)
++ ...+.|+.|||| +.+...|+.+-+
T Consensus 143 ~~-~~~v~v~~iGiG~~~~~~~L~~iA~ 169 (199)
T 3zqk_A 143 RL-PGDIQVVPIGVGPNANVQELERIGW 169 (199)
T ss_dssp CC-CTTEEEEEEEESTTCCHHHHHHHHT
T ss_pred HH-hCCCEEEEEEcCCCCCHHHHHHHhC
Confidence 11 257899999999 568888877764
No 120
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=97.16 E-value=0.0019 Score=73.56 Aligned_cols=154 Identities=13% Similarity=0.183 Sum_probs=100.7
Q ss_pred CcceEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEe
Q 007848 346 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFN 422 (587)
Q Consensus 346 ~g~~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~ 422 (587)
.+..+++++.||-|+| |. ...++++...+..++..++ ..-+|-++-|+.. +...|+
T Consensus 240 ~~~~~div~vlD~SgS------------M~----~~~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f~~~-----~~~~~~ 298 (741)
T 3hrz_D 240 PSGSMNIYLVLDGSGS------------IG----ASDFTGAKKCLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVK 298 (741)
T ss_dssp TTCEEEEEEEEECSTT------------TC----HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-----EEEEEC
T ss_pred CCCceeEEEEeccCCc------------cc----ccchHHHHHHHHHHHHhhhccCCCceEEEEEeccC-----CceeEe
Confidence 3457999999999997 43 2345666666666665554 3445888888764 233566
Q ss_pred CCCCCCCCcccCHHHHHHHHHhhhccee-----ecCCCChHHHHHHHHHHHHhhh----ccCCCceEEEEEEeCCCcC--
Q 007848 423 LNGSNSYCEVEGIPGIMMAYTSALHNVN-----LAGPTLFGPVISNAALIAGQSL----ANHGQKYFVLLIITDGVVT-- 491 (587)
Q Consensus 423 l~~~~~~p~~~g~~~i~~~Y~~~~~~v~-----~~gpt~f~~ii~~~~~~a~~~~----~~~~~~y~vlliltdG~i~-- 491 (587)
|+. ..-...+.+++ ++..+. ..|-|+....|+.|.+...... ......-.++++||||.-+
T Consensus 299 l~~----~~~~~~~~~~~----~i~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g 370 (741)
T 3hrz_D 299 VSE----ADSSNADWVTK----QLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMG 370 (741)
T ss_dssp TTS----GGGGCHHHHHH----HHTTCCGGGGSSSCCCCHHHHHHHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSS
T ss_pred ecc----cCCcCHHHHHH----HHHhcccccccCCCChHHHHHHHHHHHHHhhhhhccccchhccCeEEEEECCCccccC
Confidence 653 11123344444 455555 6889999999999988762110 0122356799999999654
Q ss_pred -CHHHHHHHHHH----------ccCCCeEEEEEecCC-CCchhhhhccc
Q 007848 492 -DLQETKDALVK----------ASDLPLSILIIGVGG-ADFKEMEILDA 528 (587)
Q Consensus 492 -d~~~t~~~i~~----------as~lPlSiiiVGvG~-~~f~~m~~ld~ 528 (587)
|..+.++.|.+ +....+.|..||||+ .+...|+.|-.
T Consensus 371 ~~p~~~~~~i~~~~~~~~~a~~~~~~gi~i~~igvG~~~~~~~L~~ia~ 419 (741)
T 3hrz_D 371 GDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALAS 419 (741)
T ss_dssp SCTHHHHHHHHHHTTCSSCTTCCCGGGEEEEEEECSSSCCHHHHHHHSC
T ss_pred CCchHHHHHHHHHhhcccccccccccCeeEEEEeCCCcCCHHHHHHHhc
Confidence 56666666663 335678999999997 57777777774
No 121
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=97.04 E-value=0.0032 Score=58.47 Aligned_cols=142 Identities=20% Similarity=0.225 Sum_probs=86.6
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCC-CcceeeecccCCCCCceeEEeCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDK-RFPAWGFGARPIDGPVSHCFNLNGSN 427 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~-~~~~~gFG~~~~~~~~~~~f~l~~~~ 427 (587)
.+.+++.||-|+| |. ...++++...+..++..++++. ++-+..|+.. +...|+|+..
T Consensus 2 ~~divfvlD~S~S------------m~----~~~~~~~k~~~~~~~~~l~~~~~rv~vv~fs~~-----~~~~~~l~~~- 59 (179)
T 1mjn_A 2 NVDLVFLFDGSMS------------LQ----PDEFQKILDFMKDVMKKCSNTSYQFAAVQFSTS-----YKTEFDFSDY- 59 (179)
T ss_dssp CEEEEEEEECBTT------------CC----HHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSS-----EEEEECHHHH-
T ss_pred CccEEEEEeCCCC------------CC----HHHHHHHHHHHHHHHHHhCCCCeEEEEEEECCc-----eeEEEcCccc-
Confidence 3689999999997 33 2356777777777777776543 6888999875 2234655320
Q ss_pred CCCcccCHHHHHHHHHhhhccee-ecCCCChHHHHHHHHHHHHh-hhccCCCceEEEEEEeCCCcCCHHHHHHHHHHccC
Q 007848 428 SYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALVKASD 505 (587)
Q Consensus 428 ~~p~~~g~~~i~~~Y~~~~~~v~-~~gpt~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as~ 505 (587)
..-+.+ .+.+..+. +.|.|+....|+.|.+.... ..........++++||||.-+|-... +..
T Consensus 60 -----~~~~~~----~~~~~~i~~~~g~T~~~~aL~~a~~~~~~~~~g~r~~~~~~iillTDG~~~~~~~~------~~~ 124 (179)
T 1mjn_A 60 -----VKRKDP----DALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNI------DAA 124 (179)
T ss_dssp -----HHHCCH----HHHHTTCCCCCBCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEESSCCSSCSCC------GGG
T ss_pred -----CCHHHH----HHHHHhcccCCCCChHHHHHHHHHHHhcccccCCCCCCCeEEEEEcCCCCCCCcch------HHH
Confidence 000011 22233333 35889999999988753211 11122346789999999987654321 123
Q ss_pred CCeEEEEEecCCCCc-----hhhhhcc
Q 007848 506 LPLSILIIGVGGADF-----KEMEILD 527 (587)
Q Consensus 506 lPlSiiiVGvG~~~f-----~~m~~ld 527 (587)
..+.|..||||+..- ..|+.+-
T Consensus 125 ~~i~i~~igvG~~~~~~~~~~~L~~iA 151 (179)
T 1mjn_A 125 KDIIRYIIGIGKHFQTKESQETLHKFA 151 (179)
T ss_dssp TTSEEEEEEESGGGCSHHHHHTTGGGS
T ss_pred CCCEEEEEEccccccccccHHHHHHHh
Confidence 467889999997632 4455554
No 122
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=97.00 E-value=0.0011 Score=78.85 Aligned_cols=149 Identities=22% Similarity=0.277 Sum_probs=100.4
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCC-CCcceeeecccCCCCCceeEEeCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSD-KRFPAWGFGARPIDGPVSHCFNLNGSN 427 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d-~~~~~~gFG~~~~~~~~~~~f~l~~~~ 427 (587)
.+.+++.||-|+| |. .+.++++...+..++..++.+ -++-+..|+.. +...|+|+.-.
T Consensus 130 ~~DIvfvlD~SgS------------m~----~~~f~~~k~fv~~lv~~~~~~~~rVglV~Fs~~-----~~~~~~lt~~~ 188 (1095)
T 3k6s_A 130 EQDIVFLIDGSGS------------IS----SRNFATMMNFVRAVISQFQRPSTQFSLMQFSNK-----FQTHFTFEEFR 188 (1095)
T ss_dssp CEEEEEEEECCTT------------SC----SHHHHHHHHHHHHHHHSSCSSSEEEEEEEESSS-----EEEEECSHHHH
T ss_pred CccEEEEEcCCCC------------CC----hhHHHHHHHHHHHHHHhccccccEEEEEEECCe-----EEEEecCcccC
Confidence 5899999999997 43 356788888888899998865 46777777664 34457765210
Q ss_pred CCCcccCHHHHHHHHHhhhcce-eecCCCChHHHHHHHHHHHHh-hhccCCCceEEEEEEeCCCc-CCHHHHHHHHHHcc
Q 007848 428 SYCEVEGIPGIMMAYTSALHNV-NLAGPTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVV-TDLQETKDALVKAS 504 (587)
Q Consensus 428 ~~p~~~g~~~i~~~Y~~~~~~v-~~~gpt~f~~ii~~~~~~a~~-~~~~~~~~y~vlliltdG~i-~d~~~t~~~i~~as 504 (587)
... .+ .+++..+ .+.|-|+.+.-|+.|.+.... ....+...--++++||||.- +|.....+++.+|-
T Consensus 189 ~~~------~l----~~ai~~i~~~gG~T~~g~AL~~a~~~lf~~~~g~R~~~~kviIllTDG~~~~d~~~~~~~a~~~r 258 (1095)
T 3k6s_A 189 RSS------NP----LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMAD 258 (1095)
T ss_dssp SCS------CG----GGGTTTCCCCCSCBCHHHHHHHHHTTTTSTTTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHHHH
T ss_pred CHH------HH----HHHHhhhhcccCCChHHHHHHHHHHhhccccccCCCCCCeEEEEEeCCCcCCCchhHHHHHHHHH
Confidence 011 11 1233344 457889999888888764321 11123345689999999998 56555555555555
Q ss_pred CCCeEEEEEecCCC-----Cchhhhhccc
Q 007848 505 DLPLSILIIGVGGA-----DFKEMEILDA 528 (587)
Q Consensus 505 ~lPlSiiiVGvG~~-----~f~~m~~ld~ 528 (587)
..-+.|..||||++ +.+.|+.+-+
T Consensus 259 ~~GI~i~aIGVG~~~~~~~d~~eL~~IAs 287 (1095)
T 3k6s_A 259 AAGIIRYAIGVGLAFQNRNSWKELNDIAS 287 (1095)
T ss_dssp HHCEEECCEEBSSGGGSTTSSHHHHTTSC
T ss_pred HCCCEEEEEecccccccccCHHHHHHHHc
Confidence 66889999999987 6777777764
No 123
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=95.61 E-value=0.056 Score=59.63 Aligned_cols=153 Identities=10% Similarity=0.055 Sum_probs=97.0
Q ss_pred CcceEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCCC------C
Q 007848 346 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPIDG------P 416 (587)
Q Consensus 346 ~g~~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~---yd~d~~~~~~gFG~~~~~~------~ 416 (587)
+|-+-.++++||.|.| ++--+.. .++..+.|..++..+++. ..+.-.+-++.||+..... .
T Consensus 4 ~~~ke~iv~~iDvS~S---------M~~~d~~-~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~~~~~~~plt~d~~ 73 (565)
T 1jey_B 4 SGNKAAVVLCMDVGFT---------MSNSIPG-IESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGDQ 73 (565)
T ss_dssp --CCEEEEEEEECCGG---------GGCCBTT-BCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCTTTC
T ss_pred CCCceEEEEEEECChH---------hcccCCC-CCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEccCCCCCccccccC
Confidence 4556789999999995 3322222 468999999999998883 5566679999999863111 1
Q ss_pred ceeEEeCCCCCCCCcccCHHHHHHHHHhhhcceeec-CCCChHHHHHHHHHHHHhhhccCCCce--EEEEEEeCCCcC-C
Q 007848 417 VSHCFNLNGSNSYCEVEGIPGIMMAYTSALHNVNLA-GPTLFGPVISNAALIAGQSLANHGQKY--FVLLIITDGVVT-D 492 (587)
Q Consensus 417 ~~~~f~l~~~~~~p~~~g~~~i~~~Y~~~~~~v~~~-gpt~f~~ii~~~~~~a~~~~~~~~~~y--~vlliltdG~i~-d 492 (587)
..|++.+.. ...+ -..++..... .++.+ +.|.+...|..|.+..+... ...++ -.+++||||+-. +
T Consensus 74 y~~i~vl~~-l~~~----~~~~l~~l~~---~l~~~~~~t~i~~al~~A~~~l~~~~--~~~k~~~krIiLlTDg~~~~~ 143 (565)
T 1jey_B 74 YQNITVHRH-LMLP----DFDLLEDIES---KIQPGSQQADFLDALIVSMDVIQHET--IGKKFEKRHIEIFTDLSSRFS 143 (565)
T ss_dssp STTEEEEEE-EECC----CHHHHHHHHT---TCCCCSSCCCHHHHHHHHHHHHHHHS--SSSCCSEEEEEEECCCCSCCC
T ss_pred CCceEEeec-CCCC----CHHHHHHHHh---hccCCCccccHHHHHHHHHHHHHHHh--hcccccccEEEEEeCCCCCCC
Confidence 123332210 0011 1133433332 24444 67999999999988776542 12233 689999999643 3
Q ss_pred HHHHHHHHHHccCCCeEEE-EEecCCC
Q 007848 493 LQETKDALVKASDLPLSIL-IIGVGGA 518 (587)
Q Consensus 493 ~~~t~~~i~~as~lPlSii-iVGvG~~ 518 (587)
.++..+++..+.+..+.|. +||+|..
T Consensus 144 ~~~~~~~a~~l~~~gI~i~~vig~g~~ 170 (565)
T 1jey_B 144 KSQLDIIIHSLKKCDISLQFFLPFSLG 170 (565)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEESSCCC
T ss_pred HHHHHHHHHHHHhcCcEEEEEeccCCC
Confidence 3455666777778899999 8999864
No 124
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=95.34 E-value=0.074 Score=59.16 Aligned_cols=156 Identities=7% Similarity=0.037 Sum_probs=96.7
Q ss_pred EEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCCC--CceeEEeCC
Q 007848 350 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPIDG--PVSHCFNLN 424 (587)
Q Consensus 350 ~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~---yd~d~~~~~~gFG~~~~~~--~~~~~f~l~ 424 (587)
=.++++||.|.| ++-.++...++..+.|++.+..+++. ..+.-.+-++.||+....+ ...|+|.+.
T Consensus 36 e~ivf~IDvS~S---------M~~~d~~~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfgt~~t~n~l~~d~i~v~~ 106 (609)
T 1jey_A 36 DSLIFLVDASKA---------MFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQ 106 (609)
T ss_dssp EEEEEEEECSGG---------GGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCCTTEEEEE
T ss_pred eEEEEEEECCHH---------HcCCCCCCCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEccCCCCCcCCCCCeEEEe
Confidence 347899999984 44333222478999999999999885 3344569999999973211 234555432
Q ss_pred CCCCCCcccCHHHHHHHHHhhhc---------ceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcC--C-
Q 007848 425 GSNSYCEVEGIPGIMMAYTSALH---------NVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT--D- 492 (587)
Q Consensus 425 ~~~~~p~~~g~~~i~~~Y~~~~~---------~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~--d- 492 (587)
. ...|.. + .+...++.+. .+.....|.+...|.-|++.-+... .+..--++++||||+-. +
T Consensus 107 ~-L~~~~~---~-~ik~l~~l~~~~~~~~~~~~~g~~~~t~l~daL~~a~~~f~~~~--~k~~~k~IiL~TDg~~p~~~~ 179 (609)
T 1jey_A 107 E-LDNPGA---K-RILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQ--FKMSHKRIMLFTNEDNPHGND 179 (609)
T ss_dssp E-EECCCH---H-HHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCS--SCEEEEEEEEEESCSCTTTTC
T ss_pred c-CCCCCH---H-HHHHHHHHhhcccchhhhhhcCCCCCCCHHHHHHHHHHHHHhhc--hhhcCCEEEEEcCCCCCCCCc
Confidence 1 112221 1 2222222211 0112467999999998888765431 11124699999999752 2
Q ss_pred ---HHHHHHHHHHccCCCeEEEEEecCCCC-ch
Q 007848 493 ---LQETKDALVKASDLPLSILIIGVGGAD-FK 521 (587)
Q Consensus 493 ---~~~t~~~i~~as~lPlSiiiVGvG~~~-f~ 521 (587)
..+...+...+..+.+.|.+||||..+ |.
T Consensus 180 ~~~~~~~~~~a~~l~~~gI~i~~igig~~~~fd 212 (609)
T 1jey_A 180 SAKASRARTKAGDLRDTGIFLDLMHLKKPGGFD 212 (609)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEBCCTTCCC
T ss_pred hHHHHHHHHHHHHHHhcCcEEEEEecCCCCccc
Confidence 125666777778899999999999763 54
No 125
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=94.38 E-value=0.31 Score=53.23 Aligned_cols=138 Identities=10% Similarity=0.079 Sum_probs=81.8
Q ss_pred cceEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCC
Q 007848 347 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGS 426 (587)
Q Consensus 347 g~~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~ 426 (587)
....+++++||.|+| +.+-+...+ -.+.++...++-+.. - ....+-++.|+... ...+++.+
T Consensus 366 ~~~~~v~lvvD~SgS---------M~~~~~~~~-l~~~~~Aa~l~~~~~-~-~~d~vglv~Fs~~~------~~~~~t~~ 427 (538)
T 1yvr_A 366 PTGKRFLLAIDVSAS---------MNQRVLGSI-LNASVVAAAMCMLVA-R-TEKDSHMVAFSDEM------LPCPITVN 427 (538)
T ss_dssp CCCCCEEEEEECSGG---------GGSBSTTSS-CBHHHHHHHHHHHHH-H-HCSSEEEEEESSSE------ECCSCCTT
T ss_pred CCCceEEEEEECccc---------cCCCCCCCc-HHHHHHHHHHHHHHh-c-cCCceEEEEECCCc------eEcCCCCc
Confidence 345789999999996 332111112 233333222222222 2 23358889998630 11233321
Q ss_pred CCCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcC----CHHHHHHHHHH
Q 007848 427 NSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT----DLQETKDALVK 502 (587)
Q Consensus 427 ~~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~----d~~~t~~~i~~ 502 (587)
.++..+++.-. .+ ..|-|+++..|..+.+. ....-++++||||..+ +..+.++.+.+
T Consensus 428 ------~~l~~~l~~l~----~~-~~GgT~i~~aL~~a~~~--------~~~~~~iIliTDg~~~~g~~~~~~~l~~~~~ 488 (538)
T 1yvr_A 428 ------MLLHEVVEKMS----DI-TMGSTDCALPMLWAQKT--------NTAADIFIVFTDCETNVEDVHPATALKQYRE 488 (538)
T ss_dssp ------SCHHHHHHHHT----TC-CCSCCCTTHHHHHHHHT--------TCCCSEEEEEECCCCCSSSCCHHHHHHHHHH
T ss_pred ------ccHHHHHHHHh----cC-CCCCCcHHHHHHHHHhc--------cCCCCEEEEEcCCCCCCCCCCHHHHHHHHHH
Confidence 22555544332 22 57889999988887654 1234689999999764 34566666666
Q ss_pred ccCCCeEEEEEecCCCCch
Q 007848 503 ASDLPLSILIIGVGGADFK 521 (587)
Q Consensus 503 as~lPlSiiiVGvG~~~f~ 521 (587)
..+.++.+++||+|.....
T Consensus 489 ~~~~~v~l~~igig~~~~~ 507 (538)
T 1yvr_A 489 KMGIPAKLIVCAMTSNGFS 507 (538)
T ss_dssp HHTCCCEEEEEECSSSSEE
T ss_pred HhCCCcEEEEEEecCCCCc
Confidence 6678899999999987643
No 126
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=93.30 E-value=0.32 Score=53.13 Aligned_cols=135 Identities=13% Similarity=0.095 Sum_probs=81.8
Q ss_pred ceEEEEEEeccccCCCCCCCCCCccc-c--CCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCC
Q 007848 348 FELNFMVAVDFTASNGNPRLPDSLHY-L--DPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLN 424 (587)
Q Consensus 348 ~~~~~~~aiDft~sN~~~~~~~slh~-~--~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~ 424 (587)
....++|+||-|+| +.+ - ... +.+ +.++..+++-++.. ..| .+-++.|++.. ...+++
T Consensus 361 ~~~~~lv~vDvSgS---------M~~~~~~~~~-k~~-~~e~Aa~la~~~~r-~~d-~v~lv~Fs~~~------~~~~~~ 421 (535)
T 2nvo_A 361 ANTRHLLALDVSGS---------MTCGDVAGVP-GLT-PNMAAAAMSLIALR-TEP-DALTMGFAEQF------RPLGIT 421 (535)
T ss_dssp CCSEEEEEECCSGG---------GGSCCGGGCT-TCC-HHHHHHHHHHHHHH-HSS-EEEEEEEBSSE------EECCCC
T ss_pred CCceEEEEEECCcc---------ccCCCCCCCC-ccc-HHHHHHHHHHHHcC-cCC-ceEEEEECCcc------eEcCCC
Confidence 45889999999996 332 1 111 245 44444555544443 223 58889998741 011332
Q ss_pred CCCCCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcC----CHHHHHHHH
Q 007848 425 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT----DLQETKDAL 500 (587)
Q Consensus 425 ~~~~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~----d~~~t~~~i 500 (587)
. . .++.++++ .... .+.|.|+++..|+.+.+. ...+-+++|||||+.. +..+.++..
T Consensus 422 ~-----~-~~l~~~l~---~l~~--~~~ggTdi~~~l~~a~~~--------~~~~~~vIliTD~~~~~g~~~~~~al~~~ 482 (535)
T 2nvo_A 422 P-----R-DTLESAMQ---KAQS--VSFGGTDCAQPILWAAQE--------RLDVDTFVVYTDNETWAGQVHPTVALDQY 482 (535)
T ss_dssp T-----T-CCHHHHHH---HTCC--SSBCCCCTTHHHHHHHHT--------TCCCSEEEEEESSCCCCCSSCHHHHHHHH
T ss_pred c-----c-hhHHHHHH---HHhh--CCCCCccHHHHHHHHHHh--------cCCCCEEEEEeCCCccCCCCCHHHHHHHH
Confidence 2 1 34444433 3322 136899999988766322 2456899999999653 345566666
Q ss_pred HHccCCCeEEEEEecCCCCc
Q 007848 501 VKASDLPLSILIIGVGGADF 520 (587)
Q Consensus 501 ~~as~lPlSiiiVGvG~~~f 520 (587)
.+..+.+..+++||||....
T Consensus 483 r~~~~~~~klv~i~l~~~~~ 502 (535)
T 2nvo_A 483 AQKMGRAPKLIVVGLTATEF 502 (535)
T ss_dssp HHHHSCCCEEEEEETTCSCC
T ss_pred HHhhCCCCeEEEEeccCCCc
Confidence 66667799999999998643
No 127
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=80.15 E-value=4.4 Score=38.43 Aligned_cols=112 Identities=15% Similarity=0.229 Sum_probs=67.3
Q ss_pred eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEeCCCCCC
Q 007848 349 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 428 (587)
Q Consensus 349 ~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 428 (587)
.+.+.+.+|+|.| |.+. ...-+..+..|.+-++.+..+-+ +|||+= .+....|.++|+.+
T Consensus 3 pvDl~fl~D~S~S------------M~~d--i~~lk~~~~~l~~~l~~~~~~~r---~Gfg~f-~Dk~~~~~l~lT~d-- 62 (212)
T 2iue_A 3 SVDLYFLMGLSGS------------AQGH--LSNVQTLGSDLLKALNEISRSGR---IGFGSI-VNMTFQHILKLTAD-- 62 (212)
T ss_dssp CEEEEEEEECCGG------------GTTT--HHHHHHHHHHHHHHHHHHCSCEE---EEEEEE-SSSCEEEEEEEESC--
T ss_pred ceEEEEEEeCCCc------------chhH--HHHHHHHHHHHHHHHHhhCcCce---EEEEEE-EcCcceecCCcCCC--
Confidence 4789999999997 6543 45666667777777766654433 577763 11123566776643
Q ss_pred CCcccCHHHHHHHHHhhhcceeecC----CC-ChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCH
Q 007848 429 YCEVEGIPGIMMAYTSALHNVNLAG----PT-LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL 493 (587)
Q Consensus 429 ~p~~~g~~~i~~~Y~~~~~~v~~~g----pt-~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~ 493 (587)
.+.+.+.+.....+| |- -|.-+.+-+....+ ..+++ .-.+|+++||+..+..
T Consensus 63 ----------~~~F~~~v~~~~vsg~~D~PE~g~dal~qa~~c~~~--i~Wr~-a~rllvl~TDa~~H~~ 119 (212)
T 2iue_A 63 ----------SSQFQRELRKQLVSGKLATPKGQLDAVVQVAICLGE--IGWRN-GTRFLVLVTDNDFHLA 119 (212)
T ss_dssp ----------HHHHHHHHHTCCCCCCSSSSBCHHHHHHHHHHCHHH--HTCCS-SEEEEEEECSSCBCCT
T ss_pred ----------HHHHHHHHhhccccCCCCCCchHHHHHHHHHHhhhh--cccCC-ccEEEEEECcCCcccc
Confidence 345566666677666 43 33333333322222 12344 7799999999977553
No 128
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=73.32 E-value=15 Score=34.78 Aligned_cols=43 Identities=14% Similarity=0.261 Sum_probs=35.5
Q ss_pred eeeEeeeeeecCCCCCceeeeEEEEeecCce--eEEEEEEEEcCC
Q 007848 82 LVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDT 124 (587)
Q Consensus 82 ~~~~~rTevi~~tlNP~w~e~f~~~~~~e~~--q~L~~~V~D~D~ 124 (587)
.....+|-|...+.+|.|+|++.+.+..+.. .+|.|.+++...
T Consensus 75 ~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 75 AISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CBSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred CceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 3467789999999999999999988776544 599999998764
No 129
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=70.07 E-value=15 Score=42.36 Aligned_cols=42 Identities=29% Similarity=0.233 Sum_probs=29.9
Q ss_pred eeecCCCChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCC
Q 007848 449 VNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTD 492 (587)
Q Consensus 449 v~~~gpt~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d 492 (587)
+...|-|+...-|..|++..++.. ....--++++||||+-++
T Consensus 351 l~~~GGT~i~~AL~~A~~lL~~~~--~~~~~kvIILLTDG~pt~ 392 (893)
T 2ww8_A 351 MYQFGATFTQKALMKADEILTQQA--RQNSQKVIFHITDGVPTM 392 (893)
T ss_dssp GGGGCSCCHHHHHHHHHHHHHHHS--CSSSEEEEEEEESSCCSE
T ss_pred cccCCCChHHHHHHHHHHHHHhhc--ccCCCeEEEEEcCCCCCc
Confidence 344788999999999998775321 123345899999998653
No 130
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=66.39 E-value=4.2 Score=39.35 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=27.6
Q ss_pred ceEEEEEEeCCCcCCHHHHHHHHHHccCCCeEEEEEecCCCC
Q 007848 478 KYFVLLIITDGVVTDLQETKDALVKASDLPLSILIIGVGGAD 519 (587)
Q Consensus 478 ~y~vlliltdG~i~d~~~t~~~i~~as~lPlSiiiVGvG~~~ 519 (587)
.--++++||||+-+--..-.++...|...-+-|..||||+.+
T Consensus 9 ~~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGig~~~ 50 (242)
T 3rag_A 9 TIRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGIVGRG 50 (242)
T ss_dssp CEEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEECCSS
T ss_pred CccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCc
Confidence 356889999998531112233334455667899999998764
No 131
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=66.03 E-value=12 Score=43.27 Aligned_cols=93 Identities=9% Similarity=0.137 Sum_probs=60.0
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCcee-eEEecceecCCCCCceee---ceEEeeecCCCCCcEEEEEE
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHI-PVCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECF 276 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~-~~~kT~vik~tlnP~Wne---f~~~~~~l~~~~~~L~i~V~ 276 (587)
..+.+.+.++.++... ..++-||.+.+.. +++.. ....|..+.-..+|.||+ |.+.+..| +.+..|.|+||
T Consensus 217 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~-g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dL-Pr~a~L~~ti~ 291 (940)
T 2wxf_A 217 QPFSIELIEGRKVNAD---ERMKLVVQAGLFH-GNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDL-PRMARLCFALY 291 (940)
T ss_dssp SEEEEEEEEEECCCC------CEEEEEEEEEE-TTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGC-CTTCEEEEEEE
T ss_pred CceEEEEEEecccCCC---CCceEEEEEEEEE-CCEEccCceecccccCCCCcccceEEEcccccccC-CcccEEEEEEE
Confidence 4567778888877643 3467888887765 34332 133455555567899999 44444544 44789999999
Q ss_pred eccCC--C----------CCceeEEEEEechhhh
Q 007848 277 NFNSN--G----------KHDLIGKVQKSLADLE 298 (587)
Q Consensus 277 D~d~~--~----------~dd~IG~~~i~l~~l~ 298 (587)
+.... + .+..||.+.+++-+-.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTT
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCc
Confidence 97432 1 2459999999998865
No 132
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=63.61 E-value=44 Score=31.65 Aligned_cols=60 Identities=17% Similarity=0.155 Sum_probs=40.4
Q ss_pred eeeEEecceecCCCCCceee-ceEEeeecCCCCCcEEEEEEeccCC----CCCceeEEEEEechh
Q 007848 237 HIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSN----GKHDLIGKVQKSLAD 296 (587)
Q Consensus 237 ~~~~~kT~vik~tlnP~Wne-f~~~~~~l~~~~~~L~i~V~D~d~~----~~dd~IG~~~i~l~~ 296 (587)
....++|-|...+.+|.|+| +++.+..-.-...-|.|+++..... .....+|.+-++|-+
T Consensus 75 ~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 75 AISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp CBSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred CceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 35678999999999999998 5544432112256899998865432 122477888777653
No 133
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=62.36 E-value=10 Score=42.39 Aligned_cols=51 Identities=8% Similarity=0.186 Sum_probs=31.0
Q ss_pred HHHHHhhhcceeecCCC-----ChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcC
Q 007848 439 MMAYTSALHNVNLAGPT-----LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT 491 (587)
Q Consensus 439 ~~~Y~~~~~~v~~~gpt-----~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~ 491 (587)
+..+.+.+..+..+|-- -|.-++..|.-. ....++.....+||++||...+
T Consensus 200 ~~~f~~~v~~~~isgn~D~PE~g~dAl~qa~~c~--~~igWr~~a~rllv~~TDa~~H 255 (690)
T 3fcs_B 200 VTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCD--EKIGWRNDASHLLVFTTDAKTH 255 (690)
T ss_dssp HHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCH--HHHTCCSSSEEEEEEEESSCBC
T ss_pred HHHHHHHhhceeccCCCCCCchHHHHHHHHhhcc--cccCCCCCceEEEEEECCCccc
Confidence 56677777777777632 333333332211 2223466789999999998765
No 134
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=56.93 E-value=21 Score=41.79 Aligned_cols=95 Identities=12% Similarity=0.180 Sum_probs=59.2
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCcee-eEEecceecCCCCCceee---ceEEeeecCCCCCcEEEEEE
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHI-PVCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECF 276 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~-~~~kT~vik~tlnP~Wne---f~~~~~~l~~~~~~L~i~V~ 276 (587)
..+.+.++.+.++.. +.....+-||++.+.. +++.. ...+|..+. ..+|.||+ |.+.+..| +....|-|+||
T Consensus 355 ~~f~v~i~~~~~~n~-~~~~~~~~~V~~~l~h-G~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dL-Pr~arL~~tl~ 430 (1091)
T 3hhm_A 355 SALRIKILCATYVNV-NIRDIDKIYVRTGIYH-GGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDL-PRAARLCLSIC 430 (1091)
T ss_dssp SEEEEEEEEESCCCC-CCSSCCCCCEEEEEES-SSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGC-CTTCEEEEEEC
T ss_pred CCEEEEEEEecCCCC-CccccceEEEEEEEEE-CCEEccCceeccccC-CCCCCCCeeEEecCccccC-ChhcEEEEEEE
Confidence 345566666666642 2223467899998865 34332 233444333 45788998 55555555 44788999999
Q ss_pred eccCC----CCCceeEEEEEechhhhh
Q 007848 277 NFNSN----GKHDLIGKVQKSLADLEK 299 (587)
Q Consensus 277 D~d~~----~~dd~IG~~~i~l~~l~~ 299 (587)
+.... ..+..||.+.++|-+-..
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~~~ 457 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDYTD 457 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCTTC
T ss_pred EecCccCcccccceeEEeeeeeEccCC
Confidence 87653 234689999999988753
No 135
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=49.67 E-value=24 Score=40.94 Aligned_cols=77 Identities=14% Similarity=0.091 Sum_probs=50.5
Q ss_pred CCCcEEEEEEEcCCCceeeEEecceecCCCCCceee---ceEEeeecCCCCCcEEEEEEeccCCC---------------
Q 007848 221 RNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECFNFNSNG--------------- 282 (587)
Q Consensus 221 ~sDPyv~v~~~~~~g~~~~~~kT~vik~tlnP~Wne---f~~~~~~l~~~~~~L~i~V~D~d~~~--------------- 282 (587)
.++-||++.+.. +++..-..+|..+.-+.+|.||+ |.+.+..| +.+..|-|+||+....+
T Consensus 237 ~~~~~V~~~l~~-G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dL-Pr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~ 314 (961)
T 1e7u_A 237 DLTVFVEANIQY-GQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDL-PKGALLNLQIYCGAKPALSGKTSAEMPSPESK 314 (961)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGC-CTTCEEEEEEEEEEC-----------------
T ss_pred CceEEEEEEEEE-CCEEcccceeeccccCCCcccceeEEeccccccC-CcccEEEEEEEecccCcccccccccccccccc
Confidence 457888887755 44444344565555566899999 44444544 44789999999865321
Q ss_pred -CCceeEEEEEechhhhh
Q 007848 283 -KHDLIGKVQKSLADLEK 299 (587)
Q Consensus 283 -~dd~IG~~~i~l~~l~~ 299 (587)
++..||.+.++|-+-..
T Consensus 315 ~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 315 GKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp ---CEEEEEEEESBCTTS
T ss_pred ccceeEEEEeeeeecCCC
Confidence 34589999999988753
No 136
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=41.09 E-value=17 Score=42.70 Aligned_cols=93 Identities=9% Similarity=0.145 Sum_probs=57.3
Q ss_pred cccceeeeccccCCcCCCCCCCCcEEEEEEEcCCCcee-eEEecceecCCCCCceee---ceEEeeecCCCCCcEEEEEE
Q 007848 201 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHI-PVCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECF 276 (587)
Q Consensus 201 ~~l~v~vi~a~~L~~~d~~g~sDPyv~v~~~~~~g~~~-~~~kT~vik~tlnP~Wne---f~~~~~~l~~~~~~L~i~V~ 276 (587)
..+.+.+..+.++... ..++-||.+.+.. +++.. ...+|..+.-..+|.||+ |.+.+..| +.+..|.|+||
T Consensus 353 ~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~-g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dL-Pr~a~L~~ti~ 427 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNTE---ETVKVHVRAGLFH-GTELLCKTVVSSEISGKNDHIWNEQLEFDINICDL-PRMARLCFAVY 427 (1092)
T ss_dssp SEEEEEECCCCCCCCC---SSCCCCCBCCEEE-TTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSC-CTTCEEEEECC
T ss_pred CCEEEEEEEeccCCCC---CCceEEEEEEEEE-CCEEccCceecccccCCCCCccceeEEeCCccccC-ChhcEEEEEEE
Confidence 4566777788877643 3567888876654 34332 123455555467899999 44444544 44788999999
Q ss_pred eccCC----------------------CCCceeEEEEEechhhh
Q 007848 277 NFNSN----------------------GKHDLIGKVQKSLADLE 298 (587)
Q Consensus 277 D~d~~----------------------~~dd~IG~~~i~l~~l~ 298 (587)
+.... +.+..||.+.+++-+-.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 428 AVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp CC------------------------------CCEEEEESBCTT
T ss_pred EecCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 97311 12348999999988765
No 137
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=39.96 E-value=15 Score=41.12 Aligned_cols=69 Identities=12% Similarity=0.141 Sum_probs=40.0
Q ss_pred HHHHhhhcceeecCCC-----ChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcC-----------------------
Q 007848 440 MAYTSALHNVNLAGPT-----LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT----------------------- 491 (587)
Q Consensus 440 ~~Y~~~~~~v~~~gpt-----~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~----------------------- 491 (587)
..+.+.+.....+|-- -|.-++..|.= .....++. ...+||++||...+
T Consensus 193 ~~F~~~v~~~~isgn~D~PE~g~dAl~qa~vc--~~~igWr~-a~rllV~~TDa~~H~agDg~l~gi~~pndg~Chl~~~ 269 (687)
T 3k6s_B 193 NQFQTEVGKQLISGNLDAPEGGLDAMMQVAAC--PEEIGWRN-VTRLLVFATDDGFHFAGDGKLGAILTPNDGRCHLEDN 269 (687)
T ss_dssp HHHHHHHHTSCCCCCSSSSCCHHHHHHHHTTC--HHHHCCCS-SCCEEEEECSSCCCCTTGGGGGTCCCCCCSCCCCSSS
T ss_pred HHHHHHHhhccccCCCCCCchHHHHHHHHhhc--ccccCCcc-ceEEEEEECCCccccCCCccccceecCCCCccccCCC
Confidence 5566666666666632 23333332210 12223444 78899999997754
Q ss_pred -----------CHHHHHHHHHHccCCCeEEE
Q 007848 492 -----------DLQETKDALVKASDLPLSIL 511 (587)
Q Consensus 492 -----------d~~~t~~~i~~as~lPlSii 511 (587)
.+.+..++|.+..-.||..+
T Consensus 270 ~y~~s~~~DyPS~~ql~~~l~~~~I~~ifav 300 (687)
T 3k6s_B 270 LYKRSNEFDYPSVGQLAHKLAENNIQPIFAV 300 (687)
T ss_dssp BCSSGGGSCCCCGGGHHHHHHHTTCBCCEEE
T ss_pred ccccccccCCCCHHHHHHHHHHcCCeEEEEE
Confidence 15677788887766665554
No 138
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=37.04 E-value=76 Score=30.46 Aligned_cols=102 Identities=18% Similarity=0.183 Sum_probs=62.5
Q ss_pred eeccccCcc---eEEEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCC
Q 007848 340 FLDYLAGGF---ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGP 416 (587)
Q Consensus 340 Fldyi~~g~---~~~~~~aiDft~sN~~~~~~~slh~~~~~~~~n~Y~~ai~~i~~~~~~yd~d~~~~~~gFG~~~~~~~ 416 (587)
.++|+-..+ .+.+++.||-|+| |.+ +.....+|+..+..-+..+-..-+|-++.|++++..-.
T Consensus 122 ~~~~~~~l~e~~~~~vvfLVDtSgS------------M~~--kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~~~~ 187 (242)
T 3rag_A 122 VMQVVEKLEDEVALHLVVCLDTSAS------------MRD--KIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGEEAT 187 (242)
T ss_dssp HHHHHHHHHHHSCEEEEEEEECSGG------------GTT--THHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTTCSC
T ss_pred hhhhhhhhcccCCCCEEEEEECccc------------HHH--HHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCccce
Confidence 466665533 4999999999997 542 34444555554444443343455699999998721111
Q ss_pred ce-eEEeCCCCCCCCcccCHHHHHHHHHhhhcceeecCCCChHHHHHHHHHHHHh
Q 007848 417 VS-HCFNLNGSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQ 470 (587)
Q Consensus 417 ~~-~~f~l~~~~~~p~~~g~~~i~~~Y~~~~~~v~~~gpt~f~~ii~~~~~~a~~ 470 (587)
.. +-|. . . . - -.+.++.++..|-|...+-|+.|.++.++
T Consensus 188 ~ll~pfT--~----~-~-~-------~~~~l~~L~agG~Tplg~AL~~A~~~~~~ 227 (242)
T 3rag_A 188 RLVQPFS--S----E-V-N-------VAALEAELVARGGTPTGPAIDHAADLLLS 227 (242)
T ss_dssp EEEEEEE--S----S-C-C-------HHHHHHHCCCCSCCCHHHHHHHHHHHHHH
T ss_pred eecCCCC--C----h-H-H-------HHHHHhhCCCCCCCcHHHHHHHHHHHHHH
Confidence 11 1232 1 1 1 1 13445567779999999999999987754
No 139
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=30.15 E-value=1.6e+02 Score=34.21 Aligned_cols=106 Identities=9% Similarity=-0.024 Sum_probs=55.3
Q ss_pred ccEEEEEEEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeec---CceeEEEEEEEEc
Q 007848 46 FSQIELSFSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQF---EVVQTLVFRIYDV 122 (587)
Q Consensus 46 ~~~ieL~v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~---e~~q~L~~~V~D~ 122 (587)
..++.+.|-+-+.+.-.....++-||.+.+-. .++.....+|..+.-+-+|.|+|.+.|++.. +..-.|.|.||+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~-G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQY-GQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEE-TTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEE-CCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 35566665443321100112456777776654 2333333456666666789999999887554 3445899999986
Q ss_pred CCCcccc----ccc-cccccccccccceeeecchh
Q 007848 123 DTQFHNV----DVK-TLKLVEQQFLGEATCTLSQI 152 (587)
Q Consensus 123 D~~~~~~----~~~-~~~l~~~d~LG~~~i~L~~l 152 (587)
.....+. +.. ...-++...||-+.++|-+-
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 296 AKPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp EC--------------------CEEEEEEEESBCT
T ss_pred ccCccccccccccccccccccceeEEEEeeeeecC
Confidence 5320000 000 00002344788888877543
No 140
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=29.14 E-value=96 Score=27.64 Aligned_cols=95 Identities=13% Similarity=0.187 Sum_probs=64.5
Q ss_pred cEEEEEEEEeCCCCCCC--CCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeecCc-------eeEEEE
Q 007848 47 SQIELSFSAADLRDRDV--LSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV-------VQTLVF 117 (587)
Q Consensus 47 ~~ieL~v~arnL~~~D~--~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~e~-------~q~L~~ 117 (587)
.-+||+|..-.|.+.-. .+-.+|..-+...=-+- +..-|-++. .++|.++.+-.+.+.-+. ...|++
T Consensus 18 nlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~df---Etq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 18 NLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDF---ELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp EEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTC---CCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred cEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEece---Eeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 67999988777743221 23457866666542111 356666665 899999988776654321 237899
Q ss_pred EEEEcCCCccccccccccccccccccceeeecchhhccCC
Q 007848 118 RIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN 157 (587)
Q Consensus 118 ~V~D~D~~~~~~~~~~~~l~~~d~LG~~~i~L~~l~~~~~ 157 (587)
+++.... .....||.+.++|.+++...+
T Consensus 94 ELhqa~g------------~~~~tla~~~I~l~~lLe~~~ 121 (156)
T 2yrb_A 94 EVHQAYS------------TEYETIAACQLKFHEILEKSG 121 (156)
T ss_dssp EEEEECS------------SCEEEEEEEEECCSHHHHCCS
T ss_pred EEEEeeC------------CCceEEEEEEEEhHHhhCcCC
Confidence 9998764 356799999999999986644
No 141
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=26.67 E-value=2.7e+02 Score=32.70 Aligned_cols=98 Identities=15% Similarity=0.081 Sum_probs=57.5
Q ss_pred ccEEEEEEEEeCCCCCCCCCCCCcEEEEEEecCCCceeeEeeeeeecCCCCCceeeeEEEEeec---CceeEEEEEEEEc
Q 007848 46 FSQIELSFSAADLRDRDVLSKSDPMLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQF---EVVQTLVFRIYDV 122 (587)
Q Consensus 46 ~~~ieL~v~arnL~~~D~~gksDPyv~v~~~~~~~~~~~~~rTevi~~tlNP~w~e~f~~~~~~---e~~q~L~~~V~D~ 122 (587)
...+.++|-+-+-.+.+.....+-||.+.+-.+........+|..+. ..+|.|+|.+.|++.- +....|.|.||+.
T Consensus 354 ~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~ 432 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSV 432 (1091)
T ss_dssp CSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEe
Confidence 46677776554444444434467788888765222222234454443 4678899999988643 4456899999997
Q ss_pred CCCccccccccccccccccccceeeecch
Q 007848 123 DTQFHNVDVKTLKLVEQQFLGEATCTLSQ 151 (587)
Q Consensus 123 D~~~~~~~~~~~~l~~~d~LG~~~i~L~~ 151 (587)
....+ . + ..+..||-+.++|-+
T Consensus 433 ~~~~~-~-----~-~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 433 KGRKG-A-----K-EEHCPLAWGNINLFD 454 (1091)
T ss_dssp CCCC--------------CCEEEEEESBC
T ss_pred cCccC-c-----c-cccceeEEeeeeeEc
Confidence 64200 0 0 134567877777654
No 142
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=23.84 E-value=90 Score=33.05 Aligned_cols=51 Identities=8% Similarity=0.225 Sum_probs=28.9
Q ss_pred HHHHHhhhcceeecCCC-----ChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcC
Q 007848 439 MMAYTSALHNVNLAGPT-----LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT 491 (587)
Q Consensus 439 ~~~Y~~~~~~v~~~gpt-----~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~ 491 (587)
.+.+.+.+.+...+|-- -|.-++..|. ..+...++...-.+||++||...+
T Consensus 200 ~~~F~~~V~~~~iSGn~D~PEgg~dAl~qaav--C~~~igWR~~a~rllV~~TDa~~H 255 (472)
T 3t3p_B 200 VTRFNEEVKKQSVSRNRDAPEGGFDAIMQATV--CDEKIGWRNDASHLLVFTTDAKTH 255 (472)
T ss_dssp HHHHHHHHHHCCCCCCSSSSBCHHHHHHHHHH--CHHHHTCCSSSEEEEEEEESSCBC
T ss_pred HHHHHHHHhhccccCCCCCCchHHHHHHHHhc--chhhcCCCCCceEEEEEECCCCcC
Confidence 45666777777776632 2433333322 012223455678899999996543
No 143
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=21.41 E-value=3.1e+02 Score=25.60 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=51.8
Q ss_pred ChHHHHHHHHHHHHhhhccCCCceEEEEEEeCCCcCCHHHHHHHHHHccCCCeEEEEEecCCCCc-hhhhhcccCCCccc
Q 007848 456 LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKASDLPLSILIIGVGGADF-KEMEILDADKGERL 534 (587)
Q Consensus 456 ~f~~ii~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as~lPlSiiiVGvG~~~f-~~m~~ld~d~~~~l 534 (587)
.|..+++-+.+.|++ ..|.+++.-+++......+.++.++. .-+=.||+.+...... ..++.+... |.++
T Consensus 22 ~~~~~~~gi~~~a~~------~g~~~~~~~~~~~~~~~~~~~~~l~~--~~vdgiI~~~~~~~~~~~~~~~~~~~-~iPv 92 (293)
T 3l6u_A 22 FAQRLINAFKAEAKA------NKYEALVATSQNSRISEREQILEFVH--LKVDAIFITTLDDVYIGSAIEEAKKA-GIPV 92 (293)
T ss_dssp HHHHHHHHHHHHHHH------TTCEEEEEECSSCHHHHHHHHHHHHH--TTCSEEEEECSCTTTTHHHHHHHHHT-TCCE
T ss_pred HHHHHHHHHHHHHHH------cCCEEEEECCCCCHHHHHHHHHHHHH--cCCCEEEEecCChHHHHHHHHHHHHc-CCCE
Confidence 355556555555554 35888888777655555555555553 3466778877765554 445666532 2454
Q ss_pred ccCCCCccccceeeeeeCcccC
Q 007848 535 ESSTGRVASRDIVQFVPLKDVQ 556 (587)
Q Consensus 535 ~~~~g~~~~rd~vqFv~~~~~~ 556 (587)
+.-.......+.+.+|.++.+.
T Consensus 93 V~~~~~~~~~~~~~~V~~D~~~ 114 (293)
T 3l6u_A 93 FAIDRMIRSDAVVSSITSNNQM 114 (293)
T ss_dssp EEESSCCCCTTCSEEEEECHHH
T ss_pred EEecCCCCCCcceeEEecCHHH
Confidence 4322222222456777766655
Done!