Query 007849
Match_columns 587
No_of_seqs 618 out of 4418
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 12:01:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007849.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007849hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wdy_A 2-5A-dependent ribonucl 100.0 1.4E-31 4.7E-36 268.8 24.2 235 146-392 20-281 (285)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 7E-32 2.4E-36 268.9 19.7 214 162-389 9-248 (253)
3 4g8k_A 2-5A-dependent ribonucl 100.0 1.2E-31 4.1E-36 278.4 21.9 259 120-391 22-300 (337)
4 2f8y_A Notch homolog 1, transl 100.0 2.3E-31 7.8E-36 258.9 21.9 208 145-391 5-218 (223)
5 3ljn_A Hypothetical protein; a 100.0 9.3E-32 3.2E-36 282.2 17.9 223 161-390 18-270 (364)
6 2xai_A ASB-9, ankyrin repeat a 100.0 6.6E-31 2.2E-35 263.3 23.2 227 164-410 4-243 (261)
7 2fo1_E LIN-12 protein; beta-ba 100.0 7.4E-32 2.5E-36 284.8 16.2 222 156-389 116-371 (373)
8 1oy3_D Transcription factor in 100.0 5E-31 1.7E-35 265.1 21.0 189 163-391 9-252 (282)
9 1k1a_A B-cell lymphoma 3-encod 100.0 1.4E-31 4.7E-36 263.2 15.9 219 162-388 8-240 (241)
10 1n11_A Ankyrin; clathrin, BAND 100.0 5.1E-31 1.8E-35 283.2 21.7 228 147-390 30-271 (437)
11 4g8k_A 2-5A-dependent ribonucl 100.0 2.4E-30 8.1E-35 268.6 24.9 215 163-391 25-267 (337)
12 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-30 3.9E-35 280.6 23.1 235 145-391 127-371 (437)
13 3b7b_A Euchromatic histone-lys 100.0 1.1E-30 3.8E-35 256.5 20.5 211 163-384 11-230 (237)
14 4b93_B Ankyrin repeat domain-c 100.0 4.1E-31 1.4E-35 266.8 13.9 200 163-376 11-230 (269)
15 3aji_A 26S proteasome non-ATPa 100.0 3E-30 1E-34 252.4 19.7 214 164-389 7-230 (231)
16 2rfa_A Transient receptor pote 100.0 4.8E-30 1.6E-34 251.3 19.8 192 164-390 4-223 (232)
17 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-29 4.6E-34 262.4 23.6 214 162-391 23-307 (351)
18 1wdy_A 2-5A-dependent ribonucl 100.0 4.1E-29 1.4E-33 250.7 26.3 219 163-391 5-247 (285)
19 2etb_A Transient receptor pote 100.0 5.1E-30 1.7E-34 255.4 18.1 196 163-390 2-247 (256)
20 4gpm_A Engineered protein OR26 100.0 1.3E-29 4.4E-34 237.9 19.5 135 257-392 26-164 (169)
21 3d9h_A CDNA FLJ77766, highly s 100.0 1.6E-29 5.4E-34 256.9 21.6 188 163-391 59-249 (285)
22 3hra_A Ankyrin repeat family p 100.0 1.5E-29 5.2E-34 241.9 20.2 186 163-387 5-201 (201)
23 1oy3_D Transcription factor in 100.0 2.5E-30 8.6E-35 260.0 14.3 226 146-375 24-269 (282)
24 2dzn_A Probable 26S proteasome 100.0 2.8E-29 9.7E-34 244.7 21.1 190 164-391 3-202 (228)
25 2pnn_A Transient receptor pote 100.0 7.6E-30 2.6E-34 256.8 14.6 197 163-389 13-258 (273)
26 3eu9_A Huntingtin-interacting 100.0 7.5E-29 2.6E-33 242.6 20.8 218 162-390 8-236 (240)
27 1s70_B 130 kDa myosin-binding 100.0 2.6E-29 8.8E-34 255.5 18.1 191 162-391 39-259 (299)
28 1ikn_D Protein (I-kappa-B-alph 100.0 3.6E-30 1.2E-34 253.3 10.9 189 163-391 8-211 (236)
29 3d9h_A CDNA FLJ77766, highly s 100.0 2.2E-29 7.6E-34 255.8 16.1 202 145-390 73-280 (285)
30 3utm_A Tankyrase-1; tankyrase, 100.0 2.8E-28 9.6E-33 252.4 23.8 121 264-389 207-334 (351)
31 3jxi_A Vanilloid receptor-rela 100.0 3.7E-29 1.3E-33 249.5 16.4 199 162-390 4-251 (260)
32 4gpm_A Engineered protein OR26 100.0 1.5E-28 5.1E-33 230.6 19.2 156 164-359 5-164 (169)
33 3kea_A K1L; tropism, ANK repea 100.0 4E-29 1.4E-33 254.0 15.9 189 162-393 30-224 (285)
34 2dzn_A Probable 26S proteasome 100.0 6E-29 2.1E-33 242.4 15.2 184 162-385 35-226 (228)
35 1yyh_A HN1;, notch 1, ankyrin 100.0 2E-28 6.9E-33 243.8 17.9 189 188-391 2-217 (253)
36 4b93_B Ankyrin repeat domain-c 100.0 1.3E-28 4.4E-33 248.5 16.2 190 195-392 8-213 (269)
37 3b7b_A Euchromatic histone-lys 100.0 1.7E-27 5.9E-32 233.6 22.4 192 188-391 3-204 (237)
38 2xai_A ASB-9, ankyrin repeat a 100.0 6.4E-28 2.2E-32 241.5 19.6 185 197-392 2-194 (261)
39 1k1a_A B-cell lymphoma 3-encod 100.0 4E-27 1.4E-31 231.2 24.0 189 195-391 6-210 (241)
40 3ljn_A Hypothetical protein; a 100.0 7.7E-29 2.6E-33 259.9 9.2 249 120-388 17-313 (364)
41 2f8y_A Notch homolog 1, transl 100.0 7.7E-28 2.6E-32 233.9 15.3 179 174-391 2-185 (223)
42 1s70_B 130 kDa myosin-binding 100.0 1.4E-28 4.7E-33 250.2 10.1 203 123-373 40-274 (299)
43 2fo1_E LIN-12 protein; beta-ba 99.9 1.1E-27 3.8E-32 252.8 15.1 217 163-392 94-341 (373)
44 3kea_A K1L; tropism, ANK repea 99.9 2.1E-28 7.3E-33 248.7 8.9 199 145-391 45-248 (285)
45 4hbd_A KN motif and ankyrin re 99.9 9.8E-28 3.4E-32 242.7 13.6 183 165-387 78-273 (276)
46 3aji_A 26S proteasome non-ATPa 99.9 4.1E-26 1.4E-30 222.9 23.9 187 196-391 4-199 (231)
47 2rfm_A Putative ankyrin repeat 99.9 4.2E-27 1.4E-31 224.0 16.2 155 195-387 32-190 (192)
48 1ihb_A P18-INK4C(INK6), cyclin 99.9 9.9E-27 3.4E-31 214.7 16.8 155 196-389 3-162 (162)
49 1sw6_A Regulatory protein SWI6 99.9 1.2E-27 4E-32 248.2 11.5 178 147-375 113-327 (327)
50 2y1l_E Darpin-8.4; hydrolase-i 99.9 2.5E-26 8.7E-31 214.3 19.3 155 195-387 11-169 (169)
51 3v31_A Ankyrin repeat family A 99.9 1.8E-26 6E-31 214.5 17.3 155 197-389 2-160 (167)
52 1ikn_D Protein (I-kappa-B-alph 99.9 4.3E-27 1.5E-31 231.3 12.1 164 195-392 5-179 (236)
53 3v30_A DNA-binding protein rfx 99.9 2.5E-26 8.6E-31 214.5 15.4 157 198-391 2-162 (172)
54 1d9s_A Cyclin-dependent kinase 99.9 1.2E-26 4.1E-31 208.7 12.0 129 259-389 3-136 (136)
55 2rfa_A Transient receptor pote 99.9 7.2E-26 2.5E-30 221.5 18.3 158 197-391 2-185 (232)
56 3twr_A Tankyrase-2; ankyrin re 99.9 4.2E-26 1.4E-30 211.4 14.8 156 195-388 5-164 (165)
57 1sw6_A Regulatory protein SWI6 99.9 6E-27 2E-31 242.8 9.5 220 146-392 34-311 (327)
58 1awc_B Protein (GA binding pro 99.9 1.6E-25 5.4E-30 205.2 17.8 147 198-383 2-152 (153)
59 2pnn_A Transient receptor pote 99.9 1.2E-26 4.1E-31 233.4 11.1 163 195-391 10-220 (273)
60 2etb_A Transient receptor pote 99.9 1.8E-26 6.2E-31 229.6 12.2 160 198-391 2-208 (256)
61 3f6q_A Integrin-linked protein 99.9 5.8E-26 2E-30 213.8 14.7 160 196-392 3-166 (179)
62 1bd8_A P19INK4D CDK4/6 inhibit 99.9 3.6E-25 1.2E-29 203.0 17.4 150 198-386 2-155 (156)
63 3hra_A Ankyrin repeat family p 99.9 5.1E-25 1.8E-29 210.4 18.7 160 196-391 3-172 (201)
64 3v30_A DNA-binding protein rfx 99.9 3.1E-25 1.1E-29 207.0 14.1 164 164-367 3-171 (172)
65 1ihb_A P18-INK4C(INK6), cyclin 99.9 7.3E-25 2.5E-29 202.1 15.3 153 163-356 5-162 (162)
66 3eu9_A Huntingtin-interacting 99.9 4.7E-24 1.6E-28 208.4 19.4 187 195-391 6-204 (240)
67 2y1l_E Darpin-8.4; hydrolase-i 99.9 5.5E-24 1.9E-28 198.4 18.9 153 162-354 13-169 (169)
68 3jxi_A Vanilloid receptor-rela 99.9 2.5E-25 8.6E-30 221.7 10.4 163 195-391 2-212 (260)
69 2jab_A H10-2-G3; HER2, darpin, 99.9 1.1E-24 3.9E-29 195.6 13.4 123 264-387 10-136 (136)
70 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.4E-24 1.2E-28 188.2 14.8 122 267-389 1-126 (126)
71 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.3E-25 1.8E-29 217.5 10.5 157 196-391 3-166 (239)
72 2rfm_A Putative ankyrin repeat 99.9 1.7E-24 5.7E-29 205.9 13.3 130 261-391 28-161 (192)
73 2vge_A RELA-associated inhibit 99.9 5E-27 1.7E-31 231.1 -4.4 180 162-384 20-208 (229)
74 1bi7_B P16INK4A, MTS1, multipl 99.9 6.3E-25 2.2E-29 202.1 9.9 130 261-392 5-139 (156)
75 3f6q_A Integrin-linked protein 99.9 6.6E-24 2.3E-28 199.6 14.7 162 163-364 5-171 (179)
76 3v31_A Ankyrin repeat family A 99.9 6.2E-24 2.1E-28 197.2 14.3 155 164-358 4-162 (167)
77 1awc_B Protein (GA binding pro 99.9 3.4E-23 1.1E-27 189.6 18.3 146 164-350 3-152 (153)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.8E-25 1.6E-29 217.8 6.3 173 163-376 5-193 (239)
79 3c5r_A BARD-1, BRCA1-associate 99.9 8.8E-25 3E-29 196.4 7.3 127 260-388 3-133 (137)
80 3twr_A Tankyrase-2; ankyrin re 99.9 1.8E-23 6E-28 193.7 13.7 127 265-392 5-136 (165)
81 3t8k_A Uncharacterized protein 99.9 4.4E-24 1.5E-28 203.3 8.9 126 261-387 30-177 (186)
82 4hbd_A KN motif and ankyrin re 99.9 1.2E-23 4.1E-28 212.6 11.4 130 261-391 104-244 (276)
83 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.6E-22 5.4E-27 185.3 16.9 148 164-353 3-155 (156)
84 1bi7_B P16INK4A, MTS1, multipl 99.9 2.6E-23 8.9E-28 191.3 10.5 139 195-372 9-152 (156)
85 3aaa_C Myotrophin, protein V-1 99.9 2.3E-23 7.9E-28 183.6 9.7 108 265-373 4-115 (123)
86 3ehr_A Osteoclast-stimulating 99.9 1.1E-23 3.9E-28 205.1 6.4 128 264-391 69-200 (222)
87 2vge_A RELA-associated inhibit 99.9 2.8E-23 9.6E-28 204.2 8.5 131 261-392 14-151 (229)
88 1d9s_A Cyclin-dependent kinase 99.9 1.8E-22 6.1E-27 181.3 10.6 129 187-356 3-136 (136)
89 3deo_A Signal recognition part 99.9 4.7E-23 1.6E-27 194.9 6.3 122 265-388 41-167 (183)
90 1dcq_A PYK2-associated protein 99.9 7.3E-21 2.5E-25 192.6 18.6 124 266-390 128-264 (278)
91 3ui2_A Signal recognition part 99.9 5.6E-22 1.9E-26 196.6 9.2 108 265-374 42-154 (244)
92 3t8k_A Uncharacterized protein 99.9 3.1E-22 1.1E-26 190.4 6.6 162 164-361 7-184 (186)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.4E-21 1.2E-25 161.1 11.7 93 296-389 1-93 (93)
94 2aja_A Ankyrin repeat family p 99.9 4.7E-23 1.6E-27 217.4 0.2 177 164-391 66-252 (376)
95 1n0r_A 4ANK, 4 ankyrin repeats 99.8 1.3E-20 4.3E-25 165.3 14.4 122 197-356 1-126 (126)
96 2jab_A H10-2-G3; HER2, darpin, 99.8 1.5E-20 5.2E-25 168.5 14.6 122 195-354 11-136 (136)
97 3lvq_E ARF-GAP with SH3 domain 99.8 9.8E-21 3.3E-25 207.3 14.5 124 269-393 133-269 (497)
98 3jue_A Arfgap with coiled-coil 99.8 1.8E-20 6.1E-25 197.0 13.2 125 264-389 195-326 (368)
99 2aja_A Ankyrin repeat family p 99.8 2.7E-22 9.1E-27 211.7 -0.8 53 164-216 93-146 (376)
100 2b0o_E UPLC1; arfgap, structur 99.8 2E-20 7E-25 191.5 13.1 122 267-389 150-284 (301)
101 2b0o_E UPLC1; arfgap, structur 99.8 2.1E-20 7.2E-25 191.4 12.8 107 264-377 186-299 (301)
102 3htm_A Speckle-type POZ protei 99.8 2.1E-20 7.1E-25 175.2 10.8 151 46-230 19-169 (172)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.3E-20 1.5E-24 154.3 11.7 89 267-356 1-93 (93)
104 2l6b_A NR1C; ankyrin, consensu 99.8 1.2E-20 4E-25 164.0 7.5 104 264-368 5-112 (115)
105 3deo_A Signal recognition part 99.8 5.4E-20 1.9E-24 173.7 11.1 136 195-386 41-181 (183)
106 3c5r_A BARD-1, BRCA1-associate 99.8 3E-20 1E-24 166.6 7.7 130 186-356 1-134 (137)
107 3hve_A Gigaxonin; ubiquitin, c 99.8 6.5E-20 2.2E-24 183.4 10.8 171 43-245 13-185 (256)
108 3ehr_A Osteoclast-stimulating 99.8 4.4E-20 1.5E-24 179.6 8.5 133 195-365 70-207 (222)
109 3aaa_C Myotrophin, protein V-1 99.8 6.8E-19 2.3E-23 154.8 11.7 98 293-391 3-100 (123)
110 3i3n_A Kelch-like protein 11; 99.8 1.5E-19 5.1E-24 183.0 7.4 174 43-244 14-192 (279)
111 2l6b_A NR1C; ankyrin, consensu 99.8 2.7E-19 9.3E-24 155.3 7.9 98 293-391 5-102 (115)
112 2ppi_A Gigaxonin; BTB domain, 99.8 1.5E-18 5.2E-23 157.9 12.0 116 42-186 28-143 (144)
113 1r29_A B-cell lymphoma 6 prote 99.8 1.8E-18 6.1E-23 153.9 12.1 113 43-187 11-124 (127)
114 3lvq_E ARF-GAP with SH3 domain 99.8 3.8E-18 1.3E-22 186.8 16.6 102 265-373 168-276 (497)
115 2if5_A Zinc finger and BTB dom 99.8 2.1E-18 7.2E-23 151.8 11.3 113 43-186 7-119 (120)
116 3jue_A Arfgap with coiled-coil 99.8 2.7E-18 9.2E-23 180.4 12.8 143 196-376 197-349 (368)
117 2zgd_A 3 repeat synthetic anky 99.8 2.4E-18 8.2E-23 148.6 10.3 91 292-383 19-109 (110)
118 3ui2_A Signal recognition part 99.8 4.1E-20 1.4E-24 183.2 -1.4 124 266-391 13-138 (244)
119 4eoz_A Speckle-type POZ protei 99.8 3.8E-19 1.3E-23 161.8 5.1 135 46-214 10-144 (145)
120 3hqi_A Speckle-type POZ protei 99.7 2.7E-18 9.1E-23 176.6 11.3 150 46-229 159-308 (312)
121 3b84_A Zinc finger and BTB dom 99.7 3.9E-18 1.3E-22 149.9 10.4 111 43-188 6-116 (119)
122 1dcq_A PYK2-associated protein 99.7 9E-18 3.1E-22 169.8 14.0 96 261-357 162-264 (278)
123 2yy9_A Zinc finger and BTB dom 99.7 4E-18 1.4E-22 153.4 9.7 113 43-190 7-119 (135)
124 2z8h_A Transcription regulator 99.7 8.2E-18 2.8E-22 151.9 11.8 117 43-191 18-134 (138)
125 2vpk_A Myoneurin; transcriptio 99.7 8.1E-18 2.8E-22 147.2 11.3 110 43-187 4-115 (116)
126 2q81_A MIZ-1 protein; BTB/POZ 99.7 9.7E-18 3.3E-22 147.4 11.3 108 43-186 9-116 (119)
127 1buo_A POZ domain, protein (pr 99.7 9.8E-18 3.3E-22 147.8 9.2 110 43-188 10-119 (121)
128 3ohu_A Transcription regulator 99.7 3.3E-18 1.1E-22 151.7 4.6 111 42-184 13-123 (125)
129 2vkp_A BTB/POZ domain-containi 99.7 2.4E-17 8.2E-22 142.4 8.2 101 55-187 2-106 (109)
130 2ihc_A Transcription regulator 99.7 6.3E-18 2.2E-22 149.7 4.2 112 43-186 11-122 (124)
131 3ga1_A Nucleus accumbens-assoc 99.7 1.7E-17 5.8E-22 148.0 6.0 111 43-188 15-126 (129)
132 2zgd_A 3 repeat synthetic anky 99.7 1.2E-16 4.1E-21 137.8 10.1 90 260-350 16-109 (110)
133 3fkc_A Transcriptional regulat 99.7 1.4E-16 4.7E-21 139.4 8.5 102 43-180 13-115 (116)
134 3m5b_A Zinc finger and BTB dom 99.6 1E-15 3.5E-20 134.3 6.1 100 47-188 18-117 (119)
135 2ast_A S-phase kinase-associat 98.3 6.4E-07 2.2E-11 82.2 7.2 115 66-191 3-127 (159)
136 4ajy_C Transcription elongatio 97.9 1.5E-05 5.1E-10 66.6 6.7 57 66-132 4-63 (97)
137 1fs1_B SKP1, cyclin A/CDK2-ass 97.6 0.00013 4.6E-09 65.1 7.7 109 66-191 4-122 (141)
138 2p1m_A SKP1-like protein 1A; F 97.1 0.00014 4.6E-09 66.6 2.1 113 66-191 6-126 (160)
139 3drz_A BTB/POZ domain-containi 96.4 0.01 3.5E-07 50.1 8.2 96 65-186 7-104 (107)
140 2fnj_C Transcription elongatio 94.2 0.067 2.3E-06 44.0 5.6 89 66-174 3-95 (96)
141 1hv2_A Elongin C, ELC1; protei 93.8 0.1 3.4E-06 43.2 5.9 59 66-135 6-65 (99)
142 3v7d_A Suppressor of kinetocho 93.4 0.35 1.2E-05 44.1 9.4 115 66-191 9-134 (169)
143 3drx_A BTB/POZ domain-containi 92.3 0.32 1.1E-05 45.4 7.5 98 65-188 13-112 (202)
144 1vcb_B Protein (elongin C); tu 68.9 5 0.00017 33.6 4.4 60 66-135 19-81 (112)
145 1t1d_A Protein (potassium chan 56.3 15 0.00053 29.9 5.0 86 66-179 3-90 (100)
146 2eqx_A Kelch repeat and BTB do 51.7 7.9 0.00027 31.8 2.6 51 195-245 10-62 (105)
147 3kvt_A Potassium channel prote 50.2 7.1 0.00024 32.9 2.0 66 65-139 6-72 (115)
148 4a1q_A ORF E73; viral protein, 46.0 3.6 0.00012 29.6 -0.4 12 499-510 61-72 (73)
149 1s1g_A Potassium voltage-gated 44.6 17 0.00057 31.0 3.5 84 65-178 14-99 (124)
150 2nz0_B Potassium voltage-gated 36.6 20 0.00069 31.2 2.9 85 65-178 36-121 (140)
151 3gna_A RAG-1, V(D)J recombinat 26.8 42 0.0014 25.7 2.7 25 537-563 33-57 (96)
152 1gp8_A Protein (scaffolding pr 21.4 62 0.0021 21.3 2.3 18 271-288 16-33 (40)
No 1
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-31 Score=268.84 Aligned_cols=235 Identities=20% Similarity=0.177 Sum_probs=195.5
Q ss_pred cccccccCCCCchhh-h-hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhc
Q 007849 146 CVDNICVHDACRPAI-N-FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVR 223 (587)
Q Consensus 146 cv~~l~~~~a~~~~i-d-~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~ 223 (587)
+++.|+.++++++.. + .+.+|||+|+..|..+++++|+++|++++.+ +.+|.||||+|+..++..+++..++...
T Consensus 20 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~- 96 (285)
T 1wdy_A 20 LVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR--KKNGATPFLLAAIAGSVKLLKLFLSKGA- 96 (285)
T ss_dssp HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTC-
T ss_pred HHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHHcCC-
Confidence 455555555555544 2 2489999999999999999999999999987 8899999999999999555444333211
Q ss_pred CCCCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCCcC----------CCCCCcHHHHHHHcCCHHHHHHHH
Q 007849 224 SDLDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVDPL----------REKRIKRIHKALDSDDVELVRLLL 288 (587)
Q Consensus 224 ~~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in~~----------d~~g~TpLh~A~~~g~~eiv~~LL 288 (587)
..+..+..+.+|++.+ .++++++.+. +++++.. +..|.||||+|+..|+.+++++|+
T Consensus 97 -~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 168 (285)
T 1wdy_A 97 -DVNECDFYGFTAFMEAAVYGKVKALKFLYKR-------GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL 168 (285)
T ss_dssp -CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHH
T ss_pred -CCCccCcccCCHHHHHHHhCCHHHHHHHHHh-------CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHH
Confidence 1222355688999987 3466666533 3345554 788999999999999999999999
Q ss_pred hC-C-CC---CCCCchHHHHHHHcCC----HHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHH-CCCCCC
Q 007849 289 SE-S-EI---TLDEANALHYAAAYCD----PKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLT-KGACAS 358 (587)
Q Consensus 289 ~~-g-~i---n~~g~tpLh~Aa~~g~----~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~-~Gadvn 358 (587)
+. | ++ |..|+||||+|+..++ .++++.|+..+ +++|.+|..|+||||+|+..|+.+++++|++ .|++++
T Consensus 169 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~ 247 (285)
T 1wdy_A 169 DEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 247 (285)
T ss_dssp HTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTT
T ss_pred HhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcc
Confidence 87 7 44 5889999999999999 88899998886 9999999999999999999999999999999 899999
Q ss_pred CCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 359 DLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 359 ~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
.+|..|+||||+|++.|+.+++++|++.|++++.
T Consensus 248 ~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~ 281 (285)
T 1wdy_A 248 DTDSDGKTALLLAVELKLKKIAELLCKRGASTDC 281 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCC
T ss_pred ccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCc
Confidence 9999999999999999999999999999999764
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.98 E-value=7e-32 Score=268.93 Aligned_cols=214 Identities=15% Similarity=0.079 Sum_probs=154.3
Q ss_pred hHHHHHHHHHHcC-------------hHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHH----HHhhhhhhhcC
Q 007849 162 FAVEMMYASSIFE-------------LPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQL----LAQCVDRIVRS 224 (587)
Q Consensus 162 ~~~tlL~~A~~~g-------------~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~L----l~~~~~~~~~~ 224 (587)
.+.||||+|+..| ..+++++|++.|.+++.. .+.+|.||||+|+..|...+ +++++++...
T Consensus 9 ~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~- 86 (253)
T 1yyh_A 9 DGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLEASADANIQ- 86 (253)
T ss_dssp -------------------------------------------C-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-
T ss_pred CCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC-
Confidence 3489999999877 889999999999888652 16788999999999998444 4444443333
Q ss_pred CCCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CC
Q 007849 225 DLDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TL 295 (587)
Q Consensus 225 ~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~ 295 (587)
+..+.+|++++ .++++++++... .+++..+..|.||||+|+..|+.+++++|++.| ++ |.
T Consensus 87 -----~~~g~t~L~~A~~~~~~~~v~~Ll~~~~------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 155 (253)
T 1yyh_A 87 -----DNMGRTPLHAAVSADAQGVFQILIRNRA------TDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD 155 (253)
T ss_dssp -----CTTSCCHHHHHHHHTCHHHHHHHHHSTT------SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCT
T ss_pred -----CCCCCCHHHHHHHcCCHHHHHHHHHcCC------CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCC
Confidence 55688899887 346666653332 258888999999999999999999999999999 55 47
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 007849 296 DEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLT 375 (587)
Q Consensus 296 ~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g 375 (587)
.|+||||+|+..|+.+++++||..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.|
T Consensus 156 ~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g 234 (253)
T 1yyh_A 156 LGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERM 234 (253)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcC
Confidence 8999999999999999999999986 999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHhcCCC
Q 007849 376 RPKDYQAKTEQGKE 389 (587)
Q Consensus 376 ~~~~v~~l~~~G~~ 389 (587)
+.+++++|......
T Consensus 235 ~~~i~~~l~~~~~~ 248 (253)
T 1yyh_A 235 HHDIVRLLDLEHHH 248 (253)
T ss_dssp CHHHHHHHHC----
T ss_pred CHHHHHHHHHHhhh
Confidence 99999999876443
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.98 E-value=1.2e-31 Score=278.36 Aligned_cols=259 Identities=19% Similarity=0.165 Sum_probs=153.5
Q ss_pred CHHHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhh--HHHHHHHHHHcChHHHHHHHHHhccccccccccCC
Q 007849 120 GYEAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINF--AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAED 197 (587)
Q Consensus 120 ~~~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~--~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~n 197 (587)
..+.-..++..+..|.+ .+|+.|+.+|++++..+. +.||||+|+..|..+++++|+++|++++.+ +..
T Consensus 22 ~~~~~t~L~~Av~~g~~--------~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~--~~~ 91 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDV--------DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR--KKN 91 (337)
T ss_dssp HHHHHHHHHHHHHTTCH--------HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTT
T ss_pred CCCCChHHHHHHHcCCH--------HHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhh--ccC
Confidence 34455667777887766 457889999999887653 589999999999999999999999988776 566
Q ss_pred ChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH-----HHHHHHHhccCCCC---CCCCcCCCcCCCCCC
Q 007849 198 IIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-----EEIRMLRLKSFPDD---ENTAVEVDPLREKRI 269 (587)
Q Consensus 198 g~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~---~~~~~~in~~d~~g~ 269 (587)
+.++++.+...+............ ...+..+..+.+|++.+ .+++.++.+.+... .....+.+..+..|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~ 169 (337)
T 4g8k_A 92 GATPFILAAIAGSVKLLKLFLSKG--ADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGA 169 (337)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTT--CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSC
T ss_pred CCchhHHHHhcccchhhHHhhhcc--chhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCC
Confidence 666666666655533322211111 11222244456666655 23444443222211 111223344455666
Q ss_pred cHHHHHHHcCCHHHHHHHHh-CC-CC---CCCCchHHHHHHHcCC---HH-HHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007849 270 KRIHKALDSDDVELVRLLLS-ES-EI---TLDEANALHYAAAYCD---PK-VLSEVLSLGLADVNLRSSRGYTVLHIGAM 340 (587)
Q Consensus 270 TpLh~A~~~g~~eiv~~LL~-~g-~i---n~~g~tpLh~Aa~~g~---~~-~v~~LL~~~gadvn~~d~~G~TpLh~Aa~ 340 (587)
||||+|+..|+.++|++||+ .| ++ |..|.||||+++..++ .+ +++.|+..| +++|.+|..|+||||+|+.
T Consensus 170 T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~~a~~ 248 (337)
T 4g8k_A 170 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVE 248 (337)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHH
Confidence 66666666666666666664 34 33 3556666666554433 22 333444433 6666666666666666666
Q ss_pred cCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 341 RKEPSVIVSLLTK-GACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 341 ~g~~~iv~~LL~~-Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
.|+.++|++|++. |+++|.+|.+|+||||+|++.|+.++|++|+++|++++
T Consensus 249 ~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n 300 (337)
T 4g8k_A 249 KKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 300 (337)
T ss_dssp TTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSST
T ss_pred hhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 6666666666653 56666666666666666666666666666666666654
No 4
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.98 E-value=2.3e-31 Score=258.92 Aligned_cols=208 Identities=13% Similarity=0.043 Sum_probs=186.8
Q ss_pred ccccccccCCCCchhh--hhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhh
Q 007849 145 TCVDNICVHDACRPAI--NFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIV 222 (587)
Q Consensus 145 ~cv~~l~~~~a~~~~i--d~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~ 222 (587)
.+++.++.++++++.. ....+|||+|+.+|..+++++|+++|++++.+ +.+|.||||+|+..+...+++..++..
T Consensus 5 ~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~- 81 (223)
T 2f8y_A 5 AVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQ--DNMGRTPLHAAVSADAQGVFQILIRNR- 81 (223)
T ss_dssp CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHBT-
T ss_pred HHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHcC-
Confidence 5678888888888765 34599999999999999999999999999987 889999999999999876644433211
Q ss_pred cCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCc
Q 007849 223 RSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEA 298 (587)
Q Consensus 223 ~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~ 298 (587)
..+++..+..|.||||+|+..|+.+++++|++.| ++ |..|.
T Consensus 82 -----------------------------------~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 126 (223)
T 2f8y_A 82 -----------------------------------ATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 126 (223)
T ss_dssp -----------------------------------TSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred -----------------------------------CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCC
Confidence 1246777899999999999999999999999999 55 47899
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCch
Q 007849 299 NALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPK 378 (587)
Q Consensus 299 tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~ 378 (587)
||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchH
Confidence 9999999999999999999986 999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhcCCCcc
Q 007849 379 DYQAKTEQGKETN 391 (587)
Q Consensus 379 ~v~~l~~~G~~~~ 391 (587)
++++|++.|+...
T Consensus 206 i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 206 IVRLLDEYNLVRS 218 (223)
T ss_dssp HHHHHHHTTCSSC
T ss_pred HHHHHHHcCCCcc
Confidence 9999999998743
No 5
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=9.3e-32 Score=282.18 Aligned_cols=223 Identities=9% Similarity=0.000 Sum_probs=187.8
Q ss_pred hhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH
Q 007849 161 NFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA 240 (587)
Q Consensus 161 d~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia 240 (587)
..+.++||+|+..|..+++++|+++|++++.+ +.+|.||||+|+..|+..+++..++... +.....+.+|++++
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~~g~t~L~~A 91 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLIETGVSPTIQ--NRFGCTALHLACKFGCVDTAKYLASVGE----VHSLWHGQKPIHLA 91 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHHCCHHHHHHHHHHCC----CCCCBTTBCHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc--CCCCCcHHHHHHHcCCHHHHHHHHHCCC----CccccCCCCHHHHH
Confidence 44599999999999999999999999999987 8899999999999999666554444332 33334688999988
Q ss_pred -----HHHHHHHhcc----CCCC----------CCCCcCCCcCCCCCCcHHHHHHHcC--CHHHHHHHHhCC-CC---CC
Q 007849 241 -----EEIRMLRLKS----FPDD----------ENTAVEVDPLREKRIKRIHKALDSD--DVELVRLLLSES-EI---TL 295 (587)
Q Consensus 241 -----~~I~~ll~~~----~~~~----------~~~~~~in~~d~~g~TpLh~A~~~g--~~eiv~~LL~~g-~i---n~ 295 (587)
.++++++++. +... ......++..+..|.||||+|+..| +.++|++|++.| ++ |.
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~ 171 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK 171 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCT
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCC
Confidence 3455555532 1110 0001223337889999999999999 999999999999 55 47
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCC-----ccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q 007849 296 DEANALHYAAAYCDPKVLSEVLSLGLAD-----VNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSI 370 (587)
Q Consensus 296 ~g~tpLh~Aa~~g~~~~v~~LL~~~gad-----vn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~ 370 (587)
.|+||||+|+..|+.+++++||..+ ++ +|.+|..|+||||+|+..|+.++|++||++|++++.+|..|+||||+
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 250 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTV-PSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYL 250 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHC-SCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcc-cccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 8999999999999999999999987 77 99999999999999999999999999999999999999999999999
Q ss_pred HHHcCCchhHHHHHhcCCCc
Q 007849 371 CRRLTRPKDYQAKTEQGKET 390 (587)
Q Consensus 371 A~~~g~~~~v~~l~~~G~~~ 390 (587)
|++.|+.+++++|+++|++.
T Consensus 251 A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 251 SVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp HHHTCCHHHHHHHHHHSCHH
T ss_pred HHHhChHHHHHHHHHcCCch
Confidence 99999999999999998874
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.97 E-value=6.6e-31 Score=263.28 Aligned_cols=227 Identities=18% Similarity=0.091 Sum_probs=185.2
Q ss_pred HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHH----HHHhhhhhhhcCCCCcccccCCCcHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQ----LLAQCVDRIVRSDLDTISIEKELPTEV 239 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~----Ll~~~~~~~~~~~~d~~~~~~~lpl~i 239 (587)
.||||+|+..|..+++++|+++|++++.+ +.+|.||||+|+..|+.. |+++++++... +..+.+|+++
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------~~~g~t~L~~ 75 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLKHGAQVNGV------TADWHTPLFN 75 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCC------CTTSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC------CCCCCCHHHH
Confidence 68999999999999999999999999987 889999999999999844 44444443333 5568899998
Q ss_pred H-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCCH
Q 007849 240 A-----EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT---LDEANALHYAAAYCDP 310 (587)
Q Consensus 240 a-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in---~~g~tpLh~Aa~~g~~ 310 (587)
+ .++++++++. +++++. +..|.||||+|+..|+.+++++|++.| ++| ..|+||||+|+..|+.
T Consensus 76 A~~~~~~~~v~~Ll~~-------g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQH-------GASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 147 (261)
T ss_dssp HHHHTCHHHHHHHHHT-------TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHC-------CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCH
Confidence 7 3466666532 344554 456999999999999999999999999 554 7899999999999999
Q ss_pred HHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCc
Q 007849 311 KVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKET 390 (587)
Q Consensus 311 ~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 390 (587)
+++++|+..+ +++|. +..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+. +.++++.+++.+..+
T Consensus 148 ~~v~~Ll~~g-~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~--~~~~~~~ll~~~~~~ 223 (261)
T 2xai_A 148 ACVKKLLESG-ADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFLEREGPP 223 (261)
T ss_dssp HHHHHHHHHT-CCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TCTHHHHHHHC-CCC
T ss_pred HHHHHHHHcC-CCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccc--cccHHHHHHhccCCc
Confidence 9999999987 99995 8899999999999999999999999999999999999999999995 456899999988876
Q ss_pred cCchhhHHHHHhhhhcCCCC
Q 007849 391 NKDRICIDVLEGEMRRNPMA 410 (587)
Q Consensus 391 ~~~~~~~~~L~~~~~~~p~~ 410 (587)
.-...|.--+.....+.|+.
T Consensus 224 ~l~~~~~~~~r~~~g~t~l~ 243 (261)
T 2xai_A 224 SLMQLCRLRIRKCFGIQQHH 243 (261)
T ss_dssp CHHHHHHHHHHTTSCTTCGG
T ss_pred cHHHHHHHHHHHHhchhccc
Confidence 55555544444444444433
No 7
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=7.4e-32 Score=284.82 Aligned_cols=222 Identities=13% Similarity=0.122 Sum_probs=187.9
Q ss_pred Cchhhh--hHHHHHHHHHHcChHHHHHHHH--------HhccccccccccCCChhHHHHHHHhCcHHH----HHhhhhhh
Q 007849 156 CRPAIN--FAVEMMYASSIFELPELVSLFQ--------RRLLNFVGKAVAEDIIPILLAAFHCQLSQL----LAQCVDRI 221 (587)
Q Consensus 156 ~~~~id--~~~tlL~~A~~~g~~elv~lLl--------~~g~di~~~~~~~ng~t~Lh~A~~~g~~~L----l~~~~~~~ 221 (587)
+++..+ .+.|+||+|+..|..+++++|+ +.|++++.+ +.+|.||||+|+..|+..+ +++++++.
T Consensus 116 ~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~--d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~ 193 (373)
T 2fo1_E 116 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM--DCDENTPLMLAVLARRRRLVAYLMKAGADPT 193 (373)
T ss_dssp TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTCCSC
T ss_pred cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC--CCCCCCHHHHHHHcChHHHHHHHHHCCCCCc
Confidence 344444 4689999999999887766655 889999988 8899999999999999544 44444433
Q ss_pred hcCCCCcccccCCCcHHHHH-----HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcC---CHHHHHHHHhCC-C
Q 007849 222 VRSDLDTISIEKELPTEVAE-----EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSD---DVELVRLLLSES-E 292 (587)
Q Consensus 222 ~~~~~d~~~~~~~lpl~ia~-----~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g---~~eiv~~LL~~g-~ 292 (587)
. .+..+.+|++++. +++.++++... .+.+++..|..|.||||+|+..| +.+++++|++.| +
T Consensus 194 ~------~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~----~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~ 263 (373)
T 2fo1_E 194 I------YNKSERSALHQAAANRDFGMMVYMLNSTK----LKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 263 (373)
T ss_dssp C------CCTTCCCHHHHHHHTTCHHHHHHHTTSHH----HHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC
T ss_pred c------cCCCCCCHHHHHHHCCCHHHHHHHHhcCc----cccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC
Confidence 3 3556889999883 46666652210 11568889999999999999998 899999999999 6
Q ss_pred CC-----------CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 007849 293 IT-----------LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLT 361 (587)
Q Consensus 293 in-----------~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d 361 (587)
++ ..|.||||+|+..|+.++|++||..+|+++|.+|..|+||||+|+..|+.++|++|+++|++++.+|
T Consensus 264 ~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d 343 (373)
T 2fo1_E 264 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD 343 (373)
T ss_dssp SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCC
Confidence 54 3899999999999999999999999889999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 362 LDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 362 ~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
..|+||||+|+.+|+.+++++|++.|++
T Consensus 344 ~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 344 ATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999999999999999999999875
No 8
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=5e-31 Score=265.14 Aligned_cols=189 Identities=16% Similarity=0.104 Sum_probs=150.1
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccc---cccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLN---FVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEV 239 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~d---i~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~i 239 (587)
+.||||+|+..|..+++++|++++++ ++.+ +..|.||||+|+..|+..+++..++
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~-------------------- 66 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ--NDLGQTALHLAAILGEASTVEKLYA-------------------- 66 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHH--------------------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccccc--CCCCCCHHHHHHHcCCHHHHHHHHH--------------------
Confidence 48999999999999999999999998 6665 7889999999999998666443332
Q ss_pred HHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-C--------------------------
Q 007849 240 AEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-E-------------------------- 292 (587)
Q Consensus 240 a~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~-------------------------- 292 (587)
.++++|.++..|.||||+|+..|+.+++++|++.| +
T Consensus 67 -----------------~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (282)
T 1oy3_D 67 -----------------AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129 (282)
T ss_dssp -----------------TTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------------------
T ss_pred -----------------cCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhh
Confidence 23456677778888888888888888888888765 2
Q ss_pred ------------------------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-CChHHHHHHHcCCHHHH
Q 007849 293 ------------------------ITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSR-GYTVLHIGAMRKEPSVI 347 (587)
Q Consensus 293 ------------------------in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~-G~TpLh~Aa~~g~~~iv 347 (587)
.|..|.||||+|+..|+.+++++||..+ +++|.++.. |+||||+|+..|+.++|
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v 208 (282)
T 1oy3_D 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAG-ADLNKPEPTCGRTPLHLAVEAQAASVL 208 (282)
T ss_dssp --------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred hccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCcCHHHHHHHcCCHHHH
Confidence 1356778888888888888888888776 888877744 88888888888888888
Q ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 348 VSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 348 ~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++
T Consensus 209 ~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 209 ELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252 (282)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC
T ss_pred HHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcC
Confidence 88888888888888888888888888888888888888888765
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.4e-31 Score=263.17 Aligned_cols=219 Identities=15% Similarity=0.080 Sum_probs=176.4
Q ss_pred hHHHHHHHHHHcChHHHHHHHHH----hccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcH
Q 007849 162 FAVEMMYASSIFELPELVSLFQR----RLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPT 237 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~----~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl 237 (587)
.+.++||+|+..|..+++++|++ .+.+++.+ +.+|.||||+|+..++..+++..++.... ....+..+.+|+
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l 83 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY--NNLRQTPLHLAVITTLPSVVRLLVTAGAS--PMALDRHGQTAA 83 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc--cccCCCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCCHH
Confidence 34899999999999999999887 78888887 88899999999999985554443332111 122245688999
Q ss_pred HHH-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC----CCCchHHHHHHHc
Q 007849 238 EVA-----EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT----LDEANALHYAAAY 307 (587)
Q Consensus 238 ~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in----~~g~tpLh~Aa~~ 307 (587)
+++ .++++++.+.... ...+++..+..|.||||+|+..|+.+++++|++.| +++ ..|.||||+|+..
T Consensus 84 ~~A~~~~~~~~~~~Ll~~~~~---~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 84 HLACEHRSPTCLRALLDSAAP---GTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp HHHHHTTCHHHHHHHHHHSCT---TSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHcCCC---ccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc
Confidence 887 3455555533321 23467888899999999999999999999999999 554 5799999999999
Q ss_pred CCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 308 CDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 308 g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
|+.+++++|+..| +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.++++.|.+.+
T Consensus 161 ~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 161 NSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp TCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred CCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 9999999999886 999999999999999999999999999999999999999999999999999999999998888776
Q ss_pred C
Q 007849 388 K 388 (587)
Q Consensus 388 ~ 388 (587)
+
T Consensus 240 a 240 (241)
T 1k1a_A 240 A 240 (241)
T ss_dssp -
T ss_pred C
Confidence 4
No 10
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=5.1e-31 Score=283.24 Aligned_cols=228 Identities=18% Similarity=0.187 Sum_probs=127.1
Q ss_pred ccccccCCCCchhhhh-HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHH----HHhhhhhh
Q 007849 147 VDNICVHDACRPAINF-AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQL----LAQCVDRI 221 (587)
Q Consensus 147 v~~l~~~~a~~~~id~-~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~L----l~~~~~~~ 221 (587)
|+.|+.+|++++..+. ..+|||+|+..|..+++++|++++++++.+ +.+|.||||+|+..|+..+ +++++++.
T Consensus 30 v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 107 (437)
T 1n11_A 30 VKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK--AKDDQTPLHCAARIGHTNMVKLLLENNANPN 107 (437)
T ss_dssp HHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCC--CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCCCHHHHHHHCCCHHHHHHHHhCCCCCC
Confidence 3444444444433332 256666666666666666666666666665 5666666666666666333 33333222
Q ss_pred hcCCCCcccccCCCcHHHHH-----HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC--
Q 007849 222 VRSDLDTISIEKELPTEVAE-----EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI-- 293 (587)
Q Consensus 222 ~~~~~d~~~~~~~lpl~ia~-----~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i-- 293 (587)
.. +..+.+|++++. +++..+++ .+.+++..+..|.||||+|+..|+.+++++|++.| ++
T Consensus 108 ~~------~~~g~t~L~~A~~~g~~~~v~~Ll~-------~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 174 (437)
T 1n11_A 108 LA------TTAGHTPLHIAAREGHVETVLALLE-------KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA 174 (437)
T ss_dssp CC------CTTCCCHHHHHHHHTCHHHHHHHHH-------TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CC------CCCCCcHHHHHHHcCCHHHHHHHHh-------CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 22 334556666552 23333321 22334445555666666666666666666666665 33
Q ss_pred -CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 007849 294 -TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICR 372 (587)
Q Consensus 294 -n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~ 372 (587)
+..|.||||+|+..|+.+++++|+..+ ++++.++..|+||||+|+..|+.+++++|+++|++++..+..|+||||+|+
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 253 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLPRG-GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 253 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGT-CCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 245566666666666666666665554 556666666666666666666666666666666666666666666666666
Q ss_pred HcCCchhHHHHHhcCCCc
Q 007849 373 RLTRPKDYQAKTEQGKET 390 (587)
Q Consensus 373 ~~g~~~~v~~l~~~G~~~ 390 (587)
..|+.+++++|++.|+++
T Consensus 254 ~~g~~~~v~~Ll~~~~~~ 271 (437)
T 1n11_A 254 QEGHAEMVALLLSKQANG 271 (437)
T ss_dssp HTTCHHHHHHHHTTTCCT
T ss_pred HCCCHHHHHHHHhcCCCC
Confidence 666666666666655543
No 11
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=2.4e-30 Score=268.56 Aligned_cols=215 Identities=20% Similarity=0.127 Sum_probs=180.3
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCc----HHHHHhhhhhhhcCCCCcccccCCCcHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQL----SQLLAQCVDRIVRSDLDTISIEKELPTE 238 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~----~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ 238 (587)
..++|+.|+..|..+++++|+++|++++.+. +.+|.||||+|+..|+ +.|+++++++..+ ...+.++++
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~-~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~------~~~~~~~~~ 97 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE-EEGGWTPLHNAVQMSREDIVELLLRHGADPVLR------KKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCC-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC------CTTCCCHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccC-CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhh------ccCCCchhH
Confidence 4899999999999999999999999998751 3458999999999998 4555555555444 445667776
Q ss_pred HHH-----HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC-------------CCCch
Q 007849 239 VAE-----EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT-------------LDEAN 299 (587)
Q Consensus 239 ia~-----~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in-------------~~g~t 299 (587)
.+. .+...+. . .+.++|..|..|.||||+|+..|+.+++++|++.| +++ ..|.|
T Consensus 98 ~~~~~~~~~~~~~~~-~------~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T 170 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFL-S------KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 170 (337)
T ss_dssp HHHHHTCHHHHHHHH-T------TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCC
T ss_pred HHHhcccchhhHHhh-h------ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCc
Confidence 552 2333332 1 45669999999999999999999999999999999 543 46899
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 007849 300 ALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKE----PSVIVSLLTKGACASDLTLDGRSAVSICRRLT 375 (587)
Q Consensus 300 pLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~----~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g 375 (587)
|||+|+..|+.++|++||.+.|+++|.+|..|+||||+++..++ ..++++|+++|+++|.+|.+|+||||+|+..|
T Consensus 171 ~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~ 250 (337)
T 4g8k_A 171 ALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK 250 (337)
T ss_dssp HHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT
T ss_pred HHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhh
Confidence 99999999999999999988779999999999999999887654 46899999999999999999999999999999
Q ss_pred CchhHHHHHhc-CCCcc
Q 007849 376 RPKDYQAKTEQ-GKETN 391 (587)
Q Consensus 376 ~~~~v~~l~~~-G~~~~ 391 (587)
+.+.++.|++. |++++
T Consensus 251 ~~~~v~~Ll~~~~~~vn 267 (337)
T 4g8k_A 251 HLGLVQRLLEQEHIEIN 267 (337)
T ss_dssp CHHHHHHHHTSTTCCTT
T ss_pred hhHHHHHHHHhcCCccc
Confidence 99999999975 65543
No 12
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1.1e-30 Score=280.55 Aligned_cols=235 Identities=17% Similarity=0.139 Sum_probs=176.1
Q ss_pred ccccccccCCCCchhhhh-HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhc
Q 007849 145 TCVDNICVHDACRPAINF-AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVR 223 (587)
Q Consensus 145 ~cv~~l~~~~a~~~~id~-~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~ 223 (587)
.++..|+.+++.....+. +.+|||+|+..|..+++++|++++++++.. +.+|.||||+|+..++..+++..++....
T Consensus 127 ~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 204 (437)
T 1n11_A 127 ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAA--GKNGLTPLHVAVHHNNLDIVKLLLPRGGS 204 (437)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--CSSCCCHHHHHHHTTCHHHHHHHGGGTCC
T ss_pred HHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 355566666665554443 367888888888888888888888877776 67778888888888876555444432221
Q ss_pred CCCCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---C
Q 007849 224 SDLDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---T 294 (587)
Q Consensus 224 ~~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n 294 (587)
.......+.+|++++ .++++++.+ .+.++|..+..|.||||+|+..|+.++|++|++.| ++ |
T Consensus 205 --~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-------~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~ 275 (437)
T 1n11_A 205 --PHSPAWNGYTPLHIAAKQNQVEVARSLLQ-------YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 275 (437)
T ss_dssp --SCCCCTTCCCHHHHHHHTTCHHHHHHHHH-------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred --CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCC
Confidence 122234467788776 235555542 34457777888888888888888888888888888 44 4
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q 007849 295 LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRL 374 (587)
Q Consensus 295 ~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~ 374 (587)
..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..
T Consensus 276 ~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~ 354 (437)
T 1n11_A 276 KSGLTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQ 354 (437)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCC-ccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHC
Confidence 77888888888888888888888876 88888888888888888888888888888888888888888888888888888
Q ss_pred CCchhHHHHHhcCCCcc
Q 007849 375 TRPKDYQAKTEQGKETN 391 (587)
Q Consensus 375 g~~~~v~~l~~~G~~~~ 391 (587)
|+.+++++|++.|++++
T Consensus 355 g~~~iv~~Ll~~ga~~~ 371 (437)
T 1n11_A 355 GHTDIVTLLLKNGASPN 371 (437)
T ss_dssp TCHHHHHHHHHTTCCSC
T ss_pred ChHHHHHHHHHCcCCCC
Confidence 88888888888888765
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.97 E-value=1.1e-30 Score=256.50 Aligned_cols=211 Identities=17% Similarity=0.131 Sum_probs=166.4
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH--
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-- 240 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-- 240 (587)
+.+|||+|+..|..+++++|+++|++++.. +.+|.||||+|+..+...+++..++.... .+.....+.+|++.+
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~ 86 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANIDTC--SEDQRTPLMEAAENNHLEAVKYLIKAGAL--VDPKDAEGSTCLHLAAK 86 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTCCCHHHHHHHTTCHHHHHHHHTTTCC--CCCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcCcc--CCCCCCHHHHHHHhCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHH
Confidence 479999999999999999999999999987 88999999999999996665544432211 122244577888877
Q ss_pred ---HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHH
Q 007849 241 ---EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVL 313 (587)
Q Consensus 241 ---~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v 313 (587)
.++++++.+.+. .+++..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++
T Consensus 87 ~~~~~~~~~Ll~~~~------~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 160 (237)
T 3b7b_A 87 KGHYEVVQYLLSNGQ------MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIA 160 (237)
T ss_dssp TTCHHHHHHHHTTTC------CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHH
T ss_pred cCCHHHHHHHHhCCC------CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHH
Confidence 346666653321 447777888888888888888888888888888 54 46788888888888888888
Q ss_pred HHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHH
Q 007849 314 SEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKT 384 (587)
Q Consensus 314 ~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~ 384 (587)
++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+|+...+..+.
T Consensus 161 ~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 161 EILLAAK-CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp HHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred HHHHHcC-CCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8888776 888888888888888888888888888888888888888888888888888887765444433
No 14
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.1e-31 Score=266.80 Aligned_cols=200 Identities=22% Similarity=0.233 Sum_probs=116.8
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccccccc------cccCCChhHHHHHHHhCc-----HHHHHhhhhhhhcCCCCcccc
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGK------AVAEDIIPILLAAFHCQL-----SQLLAQCVDRIVRSDLDTISI 231 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~------~~~~ng~t~Lh~A~~~g~-----~~Ll~~~~~~~~~~~~d~~~~ 231 (587)
..++|+.|+..|..+++++|++.+.+.... ..+..+.+||+.|+..+. ..|++.+++++.. +.
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~------d~ 84 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVT------SQ 84 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCC------CT
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCc------CC
Confidence 378999999999999999999887753211 125667889998887664 3344444443333 34
Q ss_pred cCCCcHHHHHH-----HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHH
Q 007849 232 EKELPTEVAEE-----IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALH 302 (587)
Q Consensus 232 ~~~lpl~ia~~-----I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh 302 (587)
.+.+|++++.. +++++++ .+++++..+..|.||+|+|+..++.+++++|++.| ++ |..|+||||
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~-------~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~ 157 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLK-------HGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLI 157 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHH-------TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHH
T ss_pred CCCCHHHHHHHcCcHHHHHHHHh-------cCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 46666666522 4444431 23446666677777777777777777777777777 43 356777777
Q ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCC
Q 007849 303 YAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTR 376 (587)
Q Consensus 303 ~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~ 376 (587)
+||..|+.+++++||..| +|+|.++..|+||||+||..|+.++|++||++|||++.+|.+|+||||+|+++++
T Consensus 158 ~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 158 YACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCc
Confidence 777777777777777664 7777777777777777777777777777777777777777777777777765443
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.97 E-value=3e-30 Score=252.36 Aligned_cols=214 Identities=16% Similarity=0.104 Sum_probs=175.5
Q ss_pred HHHHHHHHHcChHHHHHHHHHhcccc-ccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH--
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNF-VGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-- 240 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di-~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-- 240 (587)
.++|+.|+..|..+.++.+++.+... +.+ +.+|.||||+|+..|...+++..++... ..+..+..+.+|++++
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRT--DQDSRTALHWACSAGHTEIVEFLLQLGV--PVNDKDDAGWSPLHIAAS 82 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCC--CTTSCCHHHHHHHHTCHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcC--CCCCCCHHHHHHHcCcHHHHHHHHHhCC--CCCCcCCCCCCHHHHHHH
Confidence 46899999999999999988876553 443 7889999999999998555444443211 1222345588898887
Q ss_pred ---HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHH
Q 007849 241 ---EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVL 313 (587)
Q Consensus 241 ---~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v 313 (587)
.++++++.+ .+++++..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++
T Consensus 83 ~~~~~~v~~Ll~-------~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 155 (231)
T 3aji_A 83 AGXDEIVKALLV-------KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155 (231)
T ss_dssp HTCHHHHHHHHH-------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred cCHHHHHHHHHH-------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 335555552 34568888999999999999999999999999998 54 47799999999999999999
Q ss_pred HHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 314 SEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 314 ~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|.+.|++
T Consensus 156 ~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a~ 230 (231)
T 3aji_A 156 HILLFYK-ASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEAS 230 (231)
T ss_dssp HHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred HHHHhcC-CCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence 9999876 99999999999999999999999999999999999999999999999999998899999998887754
No 16
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=4.8e-30 Score=251.32 Aligned_cols=192 Identities=15% Similarity=0.087 Sum_probs=168.5
Q ss_pred HHHHHHHHHcChHHHHHHHHHh-ccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRR-LLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~-g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
.||||.|+..|..+++++|++. +++++.+ +.+|.||||+|+..|+..+++..++.... .
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----~-------------- 63 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQR--GAMGETALHIAALYDNLEAAMVLMEAAPE----L-------------- 63 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHHCGG----G--------------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCch----h--------------
Confidence 6899999999999999999998 9999988 89999999999999996554444332211 0
Q ss_pred HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCCC----------------CCchHHHHHH
Q 007849 243 IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EITL----------------DEANALHYAA 305 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in~----------------~g~tpLh~Aa 305 (587)
.....+..|..|.||||+|+..|+.+++++|+++| +++. .|.||||+|+
T Consensus 64 --------------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 129 (232)
T 2rfa_A 64 --------------VFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129 (232)
T ss_dssp --------------GGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHH
T ss_pred --------------ccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHH
Confidence 00123556889999999999999999999999999 6542 6999999999
Q ss_pred HcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHH----HHHHHCCCCC------CCCCCCCCcHHHHHHHcC
Q 007849 306 AYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVI----VSLLTKGACA------SDLTLDGRSAVSICRRLT 375 (587)
Q Consensus 306 ~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv----~~LL~~Gadv------n~~d~~G~TpL~~A~~~g 375 (587)
..|+.+++++|+..| +++|.+|..|+||||+|+..|+.+++ ++|+++|+++ +.+|..|+||||+|++.|
T Consensus 130 ~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 130 CVGSEEIVRLLIEHG-ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp HHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 999999999999886 99999999999999999999999988 9999999998 689999999999999999
Q ss_pred CchhHHHHHhcCCCc
Q 007849 376 RPKDYQAKTEQGKET 390 (587)
Q Consensus 376 ~~~~v~~l~~~G~~~ 390 (587)
+.+++++|+++|.+.
T Consensus 209 ~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 209 NIVMFQHLMQKRKHI 223 (232)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHhcCccc
Confidence 999999999998664
No 17
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.3e-29 Score=262.37 Aligned_cols=214 Identities=21% Similarity=0.191 Sum_probs=169.4
Q ss_pred hHHHHHHHHHHcChHHHHHHHHH-hccccccccccCCChhHHHHHHHhCcHHH----HHhhhhhhhcCCCCcccccCCCc
Q 007849 162 FAVEMMYASSIFELPELVSLFQR-RLLNFVGKAVAEDIIPILLAAFHCQLSQL----LAQCVDRIVRSDLDTISIEKELP 236 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~-~g~di~~~~~~~ng~t~Lh~A~~~g~~~L----l~~~~~~~~~~~~d~~~~~~~lp 236 (587)
+..++|+.|+..|..+.++.++. .+.+++.+ +..|.||||+|+..|+..+ +++++++... +..+.+|
T Consensus 23 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------~~~g~t~ 94 (351)
T 3utm_A 23 YKKDELLEAARSGNEEKLMALLTPLNVNCHAS--DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK------DKGGLVP 94 (351)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS--STTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC------CTTCCCH
T ss_pred ccchhHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc------CCCCCcH
Confidence 34777888888777776655554 46666665 6777888888888887443 3333333322 4457778
Q ss_pred HHHH-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC----------------
Q 007849 237 TEVA-----EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT---------------- 294 (587)
Q Consensus 237 l~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in---------------- 294 (587)
++++ .++++++++ .++++|..|..|.||||+|+..|+.+++++|+++| +++
T Consensus 95 L~~A~~~g~~~iv~~Ll~-------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~ 167 (351)
T 3utm_A 95 LHNACSYGHYEVTELLLK-------HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP 167 (351)
T ss_dssp HHHHHHTTCHHHHHHHHH-------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSH
T ss_pred HHHHHHCCCHHHHHHHHH-------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhh
Confidence 7776 335555552 34557888888888888888888888888888887 432
Q ss_pred -----------------------------------------CCCchHHHHHHHc---CCHHHHHHHHHcCCCCccccCCC
Q 007849 295 -----------------------------------------LDEANALHYAAAY---CDPKVLSEVLSLGLADVNLRSSR 330 (587)
Q Consensus 295 -----------------------------------------~~g~tpLh~Aa~~---g~~~~v~~LL~~~gadvn~~d~~ 330 (587)
..|.||||+|+.. +..++++.|+..+ +++|.+|..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~ 246 (351)
T 3utm_A 168 ELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKD 246 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCCTT
T ss_pred hhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcCCC
Confidence 4578999999999 4478888888876 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 331 GYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 331 G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
|+||||+|+..|+.++|++|+++|+++|.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 247 g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 247 FMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999865
No 18
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=4.1e-29 Score=250.72 Aligned_cols=219 Identities=17% Similarity=0.071 Sum_probs=188.3
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH--
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-- 240 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-- 240 (587)
+.++|+.|+..|..+++++|++.+.+++.. .+..|.||||+|+..|...+++..++.... ....+..+.+|++++
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSREDIVELLLRHGAD--PVLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccc-cCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHH
Confidence 589999999999999999999999998764 256789999999999995554443332111 222355688999988
Q ss_pred ---HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC-------------CCCCchHHHH
Q 007849 241 ---EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI-------------TLDEANALHY 303 (587)
Q Consensus 241 ---~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i-------------n~~g~tpLh~ 303 (587)
.++++++++ .+++++..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+
T Consensus 82 ~~~~~~v~~Ll~-------~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~ 154 (285)
T 1wdy_A 82 AGSVKLLKLFLS-------KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMD 154 (285)
T ss_dssp HTCHHHHHHHHH-------TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHH
T ss_pred cCCHHHHHHHHH-------cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHH
Confidence 346666652 34668999999999999999999999999999999 54 4568999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchh
Q 007849 304 AAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKE----PSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKD 379 (587)
Q Consensus 304 Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~----~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~ 379 (587)
|+..|+.+++++|+...|+++|.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|+..|+.++
T Consensus 155 A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 234 (285)
T 1wdy_A 155 AAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGL 234 (285)
T ss_dssp HHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 9999999999999998669999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHh-cCCCcc
Q 007849 380 YQAKTE-QGKETN 391 (587)
Q Consensus 380 v~~l~~-~G~~~~ 391 (587)
+++|++ .|.+++
T Consensus 235 v~~Ll~~~g~~~~ 247 (285)
T 1wdy_A 235 VQRLLEQEHIEIN 247 (285)
T ss_dssp HHHHHHSSSCCTT
T ss_pred HHHHHhccCCCcc
Confidence 999998 788765
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=5.1e-30 Score=255.37 Aligned_cols=196 Identities=17% Similarity=0.156 Sum_probs=168.8
Q ss_pred HHHHHHHHHHcChHH----HHHHHHHhcccccc----ccccCCChhHHHHHHHh---Cc----HHHHHhhhhhhhcCCCC
Q 007849 163 AVEMMYASSIFELPE----LVSLFQRRLLNFVG----KAVAEDIIPILLAAFHC---QL----SQLLAQCVDRIVRSDLD 227 (587)
Q Consensus 163 ~~tlL~~A~~~g~~e----lv~lLl~~g~di~~----~~~~~ng~t~Lh~A~~~---g~----~~Ll~~~~~~~~~~~~d 227 (587)
+.++||.|+..|..+ +++++++.+++++. + +.+|.||||+|+.. |+ +.|++.+++......
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~--d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~-- 77 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTE--GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP-- 77 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSB--TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSC--
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccC--CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhh--
Confidence 479999999999986 77888889999987 6 88999999999998 87 667676666543310
Q ss_pred cccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC---CC-------
Q 007849 228 TISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT---LD------- 296 (587)
Q Consensus 228 ~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in---~~------- 296 (587)
+. ...+...|..|.||||+|+..|+.++|++|+++| ++| ..
T Consensus 78 ------------------~~----------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~ 129 (256)
T 2etb_A 78 ------------------LV----------NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQ 129 (256)
T ss_dssp ------------------GG----------GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCS
T ss_pred ------------------hc----------ccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccc
Confidence 00 0113334678999999999999999999999999 665 32
Q ss_pred ------CchHHHHHHHcCCHHHHHHHHHc--CCCCccccCCCCChHHHHHHH--cCCHH-------HHHHHHHCCCCC--
Q 007849 297 ------EANALHYAAAYCDPKVLSEVLSL--GLADVNLRSSRGYTVLHIGAM--RKEPS-------VIVSLLTKGACA-- 357 (587)
Q Consensus 297 ------g~tpLh~Aa~~g~~~~v~~LL~~--~gadvn~~d~~G~TpLh~Aa~--~g~~~-------iv~~LL~~Gadv-- 357 (587)
|+||||+|+..|+.+++++||.. .|+++|.+|..|+||||+|+. .++.+ ++++|+++|+++
T Consensus 130 ~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~ 209 (256)
T 2etb_A 130 GTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCP 209 (256)
T ss_dssp SSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHST
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCccc
Confidence 99999999999999999999993 459999999999999999999 88988 999999999999
Q ss_pred -----CCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCc
Q 007849 358 -----SDLTLDGRSAVSICRRLTRPKDYQAKTEQGKET 390 (587)
Q Consensus 358 -----n~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 390 (587)
+.+|..|+||||+|+..|+.+++++|+++|.+.
T Consensus 210 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 210 TVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence 999999999999999999999999999998763
No 20
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.3e-29 Score=237.89 Aligned_cols=135 Identities=27% Similarity=0.369 Sum_probs=124.0
Q ss_pred CCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC
Q 007849 257 TAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGY 332 (587)
Q Consensus 257 ~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~ 332 (587)
.++++|.+|.+|+||||+|+..++.+++++|++.| ++ |..|+||||+|+..|+.++++.||..| +|+|.+|.+|+
T Consensus 26 ~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-advn~~d~~G~ 104 (169)
T 4gpm_A 26 NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNAKDSDGR 104 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSC
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCc-CCCCCCCCCCC
Confidence 45668999999999999999999999999999999 65 488999999999999999999999986 99999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 333 TVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 333 TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
||||+||..|+.++|++||++|++++.+|.+|+||||+|++.|+.+++++|+++|++...
T Consensus 105 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 105 TPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999998643
No 21
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.6e-29 Score=256.89 Aligned_cols=188 Identities=15% Similarity=0.105 Sum_probs=158.3
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
+.|+||+|+..|..+++++|++.|++++.+ +.+|.||||+|+..|+..+++..++
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~----------------------- 113 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAVNII--TADHVSPLHEACLGGHLSCVKILLK----------------------- 113 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCEE--CTTCCCHHHHHHHTTCHHHHHHHHH-----------------------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHH-----------------------
Confidence 489999999999999999999999999988 8899999999999998666443332
Q ss_pred HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC--CCCCchHHHHHHHcCCHHHHHHHHHc
Q 007849 243 IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI--TLDEANALHYAAAYCDPKVLSEVLSL 319 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i--n~~g~tpLh~Aa~~g~~~~v~~LL~~ 319 (587)
.++++|.+|..|.||||+|+..|+.++|++|++.| ++ +..|.||||+|+..|+.+++++|+..
T Consensus 114 --------------~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 179 (285)
T 3d9h_A 114 --------------HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAY 179 (285)
T ss_dssp --------------TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHT
T ss_pred --------------CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 23457777888888888888888888888888888 43 46688888888888888888888877
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 320 GLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 320 ~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
+ +++|.+|..|+||||+|+..|+.++|++|+++|++++. |..|+||||+|+..|+.+++++|++.|++++
T Consensus 180 g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 249 (285)
T 3d9h_A 180 G-GNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQ 249 (285)
T ss_dssp T-CCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred C-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 6 88888888888888888888888888888888888884 7888888888888888888888888888754
No 22
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.5e-29 Score=241.92 Aligned_cols=186 Identities=16% Similarity=0.105 Sum_probs=167.8
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhcc-ccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLL-NFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAE 241 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~-di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~ 241 (587)
..++|+.|+..|..+.++.++..+. +++.. +.+|.||||+|+..++..+++..++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~---------------------- 60 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQVDEV--DTEGNTPLNIAVHNNDIEIAKALID---------------------- 60 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC--CTTSCCHHHHHHHHTCHHHHHHHHH----------------------
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHH----------------------
Confidence 4789999999999999999888776 88777 8899999999999998766444332
Q ss_pred HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCCHHHHHHH
Q 007849 242 EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES--EI---TLDEANALHYAAAYCDPKVLSEV 316 (587)
Q Consensus 242 ~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g--~i---n~~g~tpLh~Aa~~g~~~~v~~L 316 (587)
.++++|..+..|.||||+|+..|+.+++++|++.+ ++ |..|.||||+|+..|+.+++++|
T Consensus 61 ---------------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 125 (201)
T 3hra_A 61 ---------------RGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL 125 (201)
T ss_dssp ---------------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHH
T ss_pred ---------------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHH
Confidence 34558888999999999999999999999999544 43 47899999999999999999999
Q ss_pred HHcCCCCccccCCCCChHHHHHHHcCC-----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 317 LSLGLADVNLRSSRGYTVLHIGAMRKE-----PSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 317 L~~~gadvn~~d~~G~TpLh~Aa~~g~-----~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
+..+++++|.+|..|+||||+|+..++ .+++++|+++|++++.+|..|+||||+|++.|+.+++++|++.|
T Consensus 126 l~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 126 LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999889999999999999999999998 99999999999999999999999999999999999999999887
No 23
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.97 E-value=2.5e-30 Score=260.00 Aligned_cols=226 Identities=19% Similarity=0.123 Sum_probs=156.9
Q ss_pred cccccccCCCC---chhhh-hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhh
Q 007849 146 CVDNICVHDAC---RPAIN-FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRI 221 (587)
Q Consensus 146 cv~~l~~~~a~---~~~id-~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~ 221 (587)
+++.|+.++++ ++..+ .+.||||+|+..|..+++++|+++|++++.+ +.+|.||||+|+..++..+++..++..
T Consensus 24 ~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 101 (282)
T 1oy3_D 24 FLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVA--ERGGHTALHLACRVRAHTCACVLLQPR 101 (282)
T ss_dssp HHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCC--CTTSCCHHHHHTTTTCHHHHHHHSSSC
T ss_pred HHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC--CCCCCCHHHHHHHcCCcchhHhhhccC
Confidence 34444444444 22222 3489999999999999999999999999987 889999999999999977766555433
Q ss_pred hcCCCCc-----------ccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 007849 222 VRSDLDT-----------ISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSE 290 (587)
Q Consensus 222 ~~~~~d~-----------~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~ 290 (587)
....... ......++........... .........+.++|..+..|.||||+|+..|+.++|++|++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 180 (282)
T 1oy3_D 102 PSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN-EEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180 (282)
T ss_dssp CSSCCCC------------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCchhhHHHHhhcccccCcchhcchhhhccccccch-hhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 2211111 0111222222211100000 000011124567889999999999999999999999999999
Q ss_pred C-CCC----CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Q 007849 291 S-EIT----LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGR 365 (587)
Q Consensus 291 g-~in----~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~ 365 (587)
| +++ ..|+||||+|+..|+.+++++||..| +++|.+|..|+||||+|+.+|+.+++++|+++||+++.+|..|+
T Consensus 181 g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 259 (282)
T 1oy3_D 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKL 259 (282)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC----
T ss_pred CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCccc
Confidence 9 654 34999999999999999999999986 99999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHcC
Q 007849 366 SAVSICRRLT 375 (587)
Q Consensus 366 TpL~~A~~~g 375 (587)
|||++|....
T Consensus 260 tpl~~a~~~~ 269 (282)
T 1oy3_D 260 SPCSSSGSDS 269 (282)
T ss_dssp ----------
T ss_pred ccccccCCcc
Confidence 9999999754
No 24
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.97 E-value=2.8e-29 Score=244.71 Aligned_cols=190 Identities=15% Similarity=0.067 Sum_probs=152.1
Q ss_pred HHHHHHHHHcChHHHHHHHHHhcccccc-ccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNFVG-KAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di~~-~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
.+|||.|+..|..+++++|++.+.+.+. + +.+|.||||+|+..+...+++..++....
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------------- 61 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQK--DQDGRIPLHWSVSFQAHEITSFLLSKMEN------------------- 61 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTCTT-------------------
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccC--CCCCCCHHHHHHHcCCHHHHHHHHhcccc-------------------
Confidence 5799999999999999999999988765 4 88899999999999986664444332211
Q ss_pred HHHHHhccCCCCCCCCcCCCc-CCCCCCcHHHHHHHcCCHHHHHHHHhCC---CC---CCCCchHHHHHHHcCCHHHHHH
Q 007849 243 IRMLRLKSFPDDENTAVEVDP-LREKRIKRIHKALDSDDVELVRLLLSES---EI---TLDEANALHYAAAYCDPKVLSE 315 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~-~d~~g~TpLh~A~~~g~~eiv~~LL~~g---~i---n~~g~tpLh~Aa~~g~~~~v~~ 315 (587)
.+++. .+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++
T Consensus 62 ----------------~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~ 125 (228)
T 2dzn_A 62 ----------------VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125 (228)
T ss_dssp ----------------CCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred ----------------ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHH
Confidence 22333 5677888888888888888888888876 22 3678888888888888888888
Q ss_pred HHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHcCCchhHHHHH-hcCCCcc
Q 007849 316 VLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKG-ACASDLTLDGRSAVSICRRLTRPKDYQAKT-EQGKETN 391 (587)
Q Consensus 316 LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpL~~A~~~g~~~~v~~l~-~~G~~~~ 391 (587)
|+..+ ++++.+|..|+||||+|+..|+.+++++|+++| ++++.+|..|+||||+|+..|+.+++++|+ +.|++++
T Consensus 126 Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~ 202 (228)
T 2dzn_A 126 LIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202 (228)
T ss_dssp HHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSC
T ss_pred HHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCC
Confidence 88775 888888888888888888888888888888888 888888888888888888888888888888 7787765
No 25
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=7.6e-30 Score=256.79 Aligned_cols=197 Identities=16% Similarity=0.085 Sum_probs=162.1
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhc----cccccc--cccCCChhHHHHHHHh---Cc----HHHHHhhhhhhhcCCCCcc
Q 007849 163 AVEMMYASSIFELPELVSLFQRRL----LNFVGK--AVAEDIIPILLAAFHC---QL----SQLLAQCVDRIVRSDLDTI 229 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g----~di~~~--~~~~ng~t~Lh~A~~~---g~----~~Ll~~~~~~~~~~~~d~~ 229 (587)
+.++||.|+..|..++++.|++++ .+++.. ..+..|.||||+|+.+ |+ +.|++++++....
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~------ 86 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL------ 86 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH------
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch------
Confidence 499999999999999888877754 444321 1167899999999987 76 5555555432211
Q ss_pred cccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC---C----------
Q 007849 230 SIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT---L---------- 295 (587)
Q Consensus 230 ~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in---~---------- 295 (587)
..+.. ..++..|..|.||||+|+..|+.++|++|+++| +++ .
T Consensus 87 --------------~~~i~----------~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~ 142 (273)
T 2pnn_A 87 --------------KQFVN----------ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGR 142 (273)
T ss_dssp --------------HHHHT----------CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSS
T ss_pred --------------hHHhh----------cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccccccccccccc
Confidence 01111 113335779999999999999999999999999 665 3
Q ss_pred ----CCchHHHHHHHcCCHHHHHHHHHc--CCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHHCCCCCC--
Q 007849 296 ----DEANALHYAAAYCDPKVLSEVLSL--GLADVNLRSSRGYTVLHIGAMRKE---------PSVIVSLLTKGACAS-- 358 (587)
Q Consensus 296 ----~g~tpLh~Aa~~g~~~~v~~LL~~--~gadvn~~d~~G~TpLh~Aa~~g~---------~~iv~~LL~~Gadvn-- 358 (587)
.|+||||+|+..|+.+++++||.. .|+++|.+|..|+||||+|+..|+ .+++++|+++|++++
T Consensus 143 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~ 222 (273)
T 2pnn_A 143 PGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPT 222 (273)
T ss_dssp CCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccc
Confidence 699999999999999999999993 359999999999999999999998 899999999999997
Q ss_pred -----CCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 359 -----DLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 359 -----~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
.+|..|+||||+|+..|+.+++++|+++|+.
T Consensus 223 ~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 223 LKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH 258 (273)
T ss_dssp CCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred cccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence 4899999999999999999999999999993
No 26
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=7.5e-29 Score=242.62 Aligned_cols=218 Identities=15% Similarity=0.128 Sum_probs=182.0
Q ss_pred hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH-
Q 007849 162 FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA- 240 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia- 240 (587)
+..++|+.|+..|..+++++|++.|++++.+ +.+|.||||+|+..+...+++..++.... ........+.+|++++
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQP--DKENVTLLHWAAINNRIDLVKYYISKGAI-VDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBTTTTBCHHHHHH
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHhCCHHHHHHHHHcCCc-chhhcCCcCCChhHHHH
Confidence 4478999999999999999999999999887 88999999999999996665544432221 0011122378999987
Q ss_pred ----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCC-HH
Q 007849 241 ----EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCD-PK 311 (587)
Q Consensus 241 ----~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~-~~ 311 (587)
.++++++.+ .+++++..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..++ .+
T Consensus 85 ~~~~~~~v~~Ll~-------~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 157 (240)
T 3eu9_A 85 RQGHLSMVVQLMK-------YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157 (240)
T ss_dssp HHTCHHHHHHHHH-------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSST
T ss_pred HcCCHHHHHHHHH-------cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHH
Confidence 345666652 34568888999999999999999999999999999 54 5889999999998777 66
Q ss_pred HHHHHHHcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCc
Q 007849 312 VLSEVLSLGLADVNLRSS-RGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKET 390 (587)
Q Consensus 312 ~v~~LL~~~gadvn~~d~-~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 390 (587)
+++.|+..+ ++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|++.|+..
T Consensus 158 ~~~~L~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 158 PTRLLLTFN-VSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK 236 (240)
T ss_dssp THHHHHHTT-CCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred HHHHHHhcC-CCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence 677776665 99999987 9999999999999999999999999999999999999999999999999999999998764
No 27
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=2.6e-29 Score=255.51 Aligned_cols=191 Identities=14% Similarity=0.107 Sum_probs=168.2
Q ss_pred hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHH
Q 007849 162 FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAE 241 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~ 241 (587)
...++|+.|+..|..+++++|+++|++++.. +.+|.||||+|+..|+..+++..++
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~---------------------- 94 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYA--NVDGLTALHQACIDDNVDMVKFLVE---------------------- 94 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCB--CTTCCBHHHHHHHTTCHHHHHHHHH----------------------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCccc--CCCCCCHHHHHHHcCCHHHHHHHHH----------------------
Confidence 3589999999999999999999999999987 8899999999999998666443332
Q ss_pred HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHH
Q 007849 242 EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVL 317 (587)
Q Consensus 242 ~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL 317 (587)
.++++|..|..|.||||+|+..|+.++|++|+++| ++ |..|.||||+|+..|+.+++..++
T Consensus 95 ---------------~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll 159 (299)
T 1s70_B 95 ---------------NGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159 (299)
T ss_dssp ---------------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHH
T ss_pred ---------------CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHH
Confidence 34557888899999999999999999999999999 54 578999999999999999988888
Q ss_pred HcCCCCccc--------------------------cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 007849 318 SLGLADVNL--------------------------RSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSIC 371 (587)
Q Consensus 318 ~~~gadvn~--------------------------~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A 371 (587)
...+++++. .+..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A 239 (299)
T 1s70_B 160 NRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAA 239 (299)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred hhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 766666553 567899999999999999999999999999999999999999999
Q ss_pred HHcCCchhHHHHHhcCCCcc
Q 007849 372 RRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 372 ~~~g~~~~v~~l~~~G~~~~ 391 (587)
+..|+.+++++|++.|++++
T Consensus 240 ~~~~~~~~v~~Ll~~gad~~ 259 (299)
T 1s70_B 240 AHWGKEEACRILVENLCDME 259 (299)
T ss_dssp HHTTCHHHHHHHHHTTCCTT
T ss_pred HhcCCHHHHHHHHHcCCCCC
Confidence 99999999999999998865
No 28
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=3.6e-30 Score=253.26 Aligned_cols=189 Identities=18% Similarity=0.146 Sum_probs=166.9
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhcc----ccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLL----NFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTE 238 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~----di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ 238 (587)
+.+|||+|+..|..+++++|++.+. +++.+ +..|.||||+|+..+...+++..+ .
T Consensus 8 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll----~--------------- 66 (236)
T 1ikn_D 8 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ--NNLQQTPLHLAVITNQPEIAEALL----G--------------- 66 (236)
T ss_dssp CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCC--CTTCCCHHHHHHHTTCHHHHHCCC----S---------------
T ss_pred CCchhHHHHHcCChhHHHHHHHHhhccHHHhhcc--CCCCCCHHHHHHHcCCHHHHHHHH----H---------------
Confidence 3789999999999988888877765 56665 788999999999998877644333 2
Q ss_pred HHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-C---------CCCCCchHHHHHHHcC
Q 007849 239 VAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-E---------ITLDEANALHYAAAYC 308 (587)
Q Consensus 239 ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~---------in~~g~tpLh~Aa~~g 308 (587)
.++++|.+|..|.||||+|+..|+.+++++|++.| + .|..|.||||+|+..|
T Consensus 67 ------------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 128 (236)
T 1ikn_D 67 ------------------AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 128 (236)
T ss_dssp ------------------CCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTT
T ss_pred ------------------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcC
Confidence 34668888999999999999999999999999988 3 2467999999999999
Q ss_pred CHHHHHHHHHcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 309 DPKVLSEVLSLGLADVNLRSS-RGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 309 ~~~~v~~LL~~~gadvn~~d~-~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
+.+++++||..| +++|.++. .|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|++.|
T Consensus 129 ~~~~v~~Ll~~g-~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~g 207 (236)
T 1ikn_D 129 YLGIVELLVSLG-ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 207 (236)
T ss_dssp CHHHHHHHHHHT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTS
T ss_pred CHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcc
Confidence 999999999987 99999997 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcc
Q 007849 388 KETN 391 (587)
Q Consensus 388 ~~~~ 391 (587)
+++.
T Consensus 208 a~~~ 211 (236)
T 1ikn_D 208 LENL 211 (236)
T ss_dssp CGGG
T ss_pred hhhh
Confidence 9754
No 29
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=255.81 Aligned_cols=202 Identities=18% Similarity=0.149 Sum_probs=172.9
Q ss_pred ccccccccCCCCchhhhhH-HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhc
Q 007849 145 TCVDNICVHDACRPAINFA-VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVR 223 (587)
Q Consensus 145 ~cv~~l~~~~a~~~~id~~-~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~ 223 (587)
.+++.|+.++++++..+.. .||||+|+..|..+++++|+++|++++.+ +.+|.||||+|+..+...+++..++.
T Consensus 73 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~--- 147 (285)
T 3d9h_A 73 LSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGV--TADWHTPLFNACVSGSWDCVNLLLQH--- 147 (285)
T ss_dssp HHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCC--CTTCCCHHHHHHHHTCHHHHHHHHHT---
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCHHHHHHHHHHC---
Confidence 4566667777776666544 89999999999999999999999999987 89999999999999987664443331
Q ss_pred CCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCch
Q 007849 224 SDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEAN 299 (587)
Q Consensus 224 ~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~t 299 (587)
+++++. +..|.||||+|+..|+.+++++|++.| ++ |..|+|
T Consensus 148 ----------------------------------g~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t 192 (285)
T 3d9h_A 148 ----------------------------------GASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGT 192 (285)
T ss_dssp ----------------------------------TCCSSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBC
T ss_pred ----------------------------------CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 223443 345999999999999999999999999 55 488999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchh
Q 007849 300 ALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKD 379 (587)
Q Consensus 300 pLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~ 379 (587)
|||+|+..|+.+++++||..+ +++|. |..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+ ++.++
T Consensus 193 ~L~~A~~~~~~~~v~~Ll~~g-a~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~ 268 (285)
T 3d9h_A 193 PLYLACENQQRACVKKLLESG-ADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPL 268 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHH
T ss_pred HHHHHHHcCcHHHHHHHHHCC-CCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHH
Confidence 999999999999999999986 99995 899999999999999999999999999999999999999999999 56789
Q ss_pred HHHHHhc-CCCc
Q 007849 380 YQAKTEQ-GKET 390 (587)
Q Consensus 380 v~~l~~~-G~~~ 390 (587)
+++|++. |++.
T Consensus 269 ~~~Ll~~~~a~l 280 (285)
T 3d9h_A 269 AQLFLEREGASL 280 (285)
T ss_dssp HHHHHHHC----
T ss_pred HHHHHHhhccCC
Confidence 9999987 6654
No 30
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=2.8e-28 Score=252.43 Aligned_cols=121 Identities=25% Similarity=0.253 Sum_probs=108.3
Q ss_pred CCCCCCcHHHHHHHc---CCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHH
Q 007849 264 LREKRIKRIHKALDS---DDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLH 336 (587)
Q Consensus 264 ~d~~g~TpLh~A~~~---g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh 336 (587)
.+..|.||||+|+.. +..+++++|++.| ++ |..|+||||+|+.+|+.+++++|+..| +++|.+|..|+||||
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~ 285 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALH 285 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHH
Confidence 457789999999999 5589999999999 55 488999999999999999999999886 999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 337 IGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 337 ~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
+|+..|+.++|++|+++|++++.+|..|+||+|+| +.+++++|.+.+..
T Consensus 286 ~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~ 334 (351)
T 3utm_A 286 RAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM 334 (351)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---
T ss_pred HHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc
Confidence 99999999999999999999999999999999998 45677777766543
No 31
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=3.7e-29 Score=249.51 Aligned_cols=199 Identities=18% Similarity=0.154 Sum_probs=165.8
Q ss_pred hHHHHHHHHHHcChHH----HHHHHHHhccccccccc--cCCChhHHHHHH---HhCc----HHHHHhhhhhhhcCCCCc
Q 007849 162 FAVEMMYASSIFELPE----LVSLFQRRLLNFVGKAV--AEDIIPILLAAF---HCQL----SQLLAQCVDRIVRSDLDT 228 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~e----lv~lLl~~g~di~~~~~--~~ng~t~Lh~A~---~~g~----~~Ll~~~~~~~~~~~~d~ 228 (587)
+..++||.|+..|..+ +++++++.+.+++.... +.+|.||||+|+ ..|+ +.|++.+++....
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~----- 78 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNM----- 78 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCH-----
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccch-----
Confidence 4489999999999888 56666669999887521 267999999999 5576 5555555543221
Q ss_pred ccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC-------------
Q 007849 229 ISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT------------- 294 (587)
Q Consensus 229 ~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in------------- 294 (587)
..+. ...++..|..|+||||+|+..|+.++|++|++.| ++|
T Consensus 79 ---------------~~~~----------~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~ 133 (260)
T 3jxi_A 79 ---------------REFI----------NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDE 133 (260)
T ss_dssp ---------------HHHH----------TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCC
T ss_pred ---------------Hhhh----------cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccc
Confidence 0111 1335566779999999999999999999999999 655
Q ss_pred ----CCCchHHHHHHHcCCHHHHHHHHHc--CCCCccccCCCCChHHHHHHHcCC---------HHHHHHHHHCCCCC--
Q 007849 295 ----LDEANALHYAAAYCDPKVLSEVLSL--GLADVNLRSSRGYTVLHIGAMRKE---------PSVIVSLLTKGACA-- 357 (587)
Q Consensus 295 ----~~g~tpLh~Aa~~g~~~~v~~LL~~--~gadvn~~d~~G~TpLh~Aa~~g~---------~~iv~~LL~~Gadv-- 357 (587)
..|+||||+|+..|+.+++++||.. .|+++|.+|..|+||||+|+..|+ .+++++|+++|+++
T Consensus 134 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~ 213 (260)
T 3jxi_A 134 GGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFP 213 (260)
T ss_dssp CCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccccc
Confidence 3599999999999999999999993 359999999999999999999888 79999999999999
Q ss_pred -----CCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCc
Q 007849 358 -----SDLTLDGRSAVSICRRLTRPKDYQAKTEQGKET 390 (587)
Q Consensus 358 -----n~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 390 (587)
+.+|..|+||||+|++.|+.+++++|+++|.++
T Consensus 214 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 214 DTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 779999999999999999999999999998764
No 32
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.96 E-value=1.5e-28 Score=230.59 Aligned_cols=156 Identities=20% Similarity=0.206 Sum_probs=137.1
Q ss_pred HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEI 243 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I 243 (587)
-+.|+.|+..|..+++++|+++|++++.+ +.+|.||||+|+..+...++...++
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~--d~~g~t~l~~a~~~~~~~~~~~ll~------------------------ 58 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNAS--DSDGRTPLHHAAENGHKEVVKLLIS------------------------ 58 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHH------------------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHcCCHHHHHHHHh------------------------
Confidence 46788999999999999999999999998 8999999999999998766433222
Q ss_pred HHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCCHHHHHHHHHc
Q 007849 244 RMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT---LDEANALHYAAAYCDPKVLSEVLSL 319 (587)
Q Consensus 244 ~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in---~~g~tpLh~Aa~~g~~~~v~~LL~~ 319 (587)
.++++|.+|.+|+||||+|+..|+.++|++|++.| ++| ..|+||||+|+..|+.++++.||..
T Consensus 59 -------------~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 125 (169)
T 4gpm_A 59 -------------KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK 125 (169)
T ss_dssp -------------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -------------cccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 34668888999999999999999999999999999 654 8899999999999999999999998
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCC
Q 007849 320 GLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASD 359 (587)
Q Consensus 320 ~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~ 359 (587)
| +++|.+|.+|+||||+|+.+|+.+++++|+++||+++.
T Consensus 126 g-ad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 126 G-ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred C-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 6 99999999999999999999999999999999999874
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.96 E-value=4e-29 Score=254.01 Aligned_cols=189 Identities=12% Similarity=-0.015 Sum_probs=165.5
Q ss_pred hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHH
Q 007849 162 FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAE 241 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~ 241 (587)
.+.||||+|+..|..+++++|+++|++++.+ +|.||||+|+..|+..+++..++
T Consensus 30 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----~g~t~L~~A~~~g~~~~v~~Ll~---------------------- 83 (285)
T 3kea_A 30 HGHSASYYAIADNNVRLVCTLLNAGALKNLL----ENEFPLHQAATLEDTKIVKILLF---------------------- 83 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC----TTCCHHHHHTTSSSCHHHHHHHH----------------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHcCCHHHHHHHHH----------------------
Confidence 3589999999999999999999999998884 58999999999988555333222
Q ss_pred HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCC-chHHHHHHHcCCHHHHHHH
Q 007849 242 EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDE-ANALHYAAAYCDPKVLSEV 316 (587)
Q Consensus 242 ~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g-~tpLh~Aa~~g~~~~v~~L 316 (587)
.++++|.+|..|+||||+|+..|+.++|++|+++| ++ |..| .||||+|+..|+.+++++|
T Consensus 84 ---------------~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~L 148 (285)
T 3kea_A 84 ---------------SGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYF 148 (285)
T ss_dssp ---------------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred ---------------CCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 34558888999999999999999999999999999 54 4677 7999999999999999999
Q ss_pred HHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH-HHHHHHcCCchhHHHHHhcCCCccCc
Q 007849 317 LSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSA-VSICRRLTRPKDYQAKTEQGKETNKD 393 (587)
Q Consensus 317 L~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~Tp-L~~A~~~g~~~~v~~l~~~G~~~~~~ 393 (587)
+..+ +++... ..|+||||+|+..|+.++|++|+++|++++.+|..|+|| ||+|+..|+.+++++|++.|++++..
T Consensus 149 l~~g-~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~ 224 (285)
T 3kea_A 149 LSEI-PSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSA 224 (285)
T ss_dssp HTTS-CTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTT
T ss_pred HhCC-Cccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Confidence 9887 665322 289999999999999999999999999999999999998 99999999999999999999997643
No 34
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=6e-29 Score=242.38 Aligned_cols=184 Identities=16% Similarity=0.151 Sum_probs=159.6
Q ss_pred hHHHHHHHHHHcChHHHHHHHHHhc--ccccc-ccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHH
Q 007849 162 FAVEMMYASSIFELPELVSLFQRRL--LNFVG-KAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTE 238 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~~g--~di~~-~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ 238 (587)
.+.+|||+|+..|..+++++|++++ .+++. . +..|.||||+|+..+...+++..++..
T Consensus 35 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~~~~Ll~~g----------------- 95 (228)
T 2dzn_A 35 DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP--DDSGWTPFHIACSVGNLEVVKSLYDRP----------------- 95 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCC--CTTSCCHHHHHHHHCCHHHHHHHHSSS-----------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccccccccC--CCCCCCHHHHHHHcCCHHHHHHHHhCC-----------------
Confidence 3489999999999999999999999 55444 3 788999999999999876644433311
Q ss_pred HHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHH
Q 007849 239 VAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLS 314 (587)
Q Consensus 239 ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~ 314 (587)
...+++..+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.++++
T Consensus 96 ------------------~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 96 ------------------LKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp ------------------SCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ------------------CCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 11457888999999999999999999999999999 55 478999999999999999999
Q ss_pred HHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHh
Q 007849 315 EVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLL-TKGACASDLTLDGRSAVSICRRLTRPKDYQAKTE 385 (587)
Q Consensus 315 ~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL-~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~ 385 (587)
.|+..+.+++|.+|..|+||||+|+..|+.+++++|+ ++|++++.+|.+|+||||+|+.. ++++++.+
T Consensus 158 ~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 9999877999999999999999999999999999999 88999999999999999999753 45555543
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=2e-28 Score=243.83 Aligned_cols=189 Identities=16% Similarity=0.157 Sum_probs=140.9
Q ss_pred ccccccccCCChhHHHHHHHhC-------------c----HHHHHhhhhhhhcCCCCcccccCCCcHHHH-----HHHHH
Q 007849 188 NFVGKAVAEDIIPILLAAFHCQ-------------L----SQLLAQCVDRIVRSDLDTISIEKELPTEVA-----EEIRM 245 (587)
Q Consensus 188 di~~~~~~~ng~t~Lh~A~~~g-------------~----~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-----~~I~~ 245 (587)
+++.+ +.+|.||||+|+..| . +.|++.+.++... .+..+.+|++++ .++++
T Consensus 2 dvn~~--d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~-----~d~~g~t~L~~A~~~g~~~~v~ 74 (253)
T 1yyh_A 2 DVNVR--GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ-----TDRTGETALHLAARYSRSDAAK 74 (253)
T ss_dssp ----------------------------------------------------C-----CCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCCC--CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc-----cCCCCCcHHHHHHHcCCHHHHH
Confidence 45566 889999999999977 4 3444444443221 245689999988 34666
Q ss_pred HHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcC
Q 007849 246 LRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES--EI---TLDEANALHYAAAYCDPKVLSEVLSLG 320 (587)
Q Consensus 246 ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g--~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~ 320 (587)
++++ .++++|..|..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+
T Consensus 75 ~Ll~-------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 147 (253)
T 1yyh_A 75 RLLE-------ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH 147 (253)
T ss_dssp HHHH-------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT
T ss_pred HHHH-------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC
Confidence 6652 35668999999999999999999999999999998 33 478999999999999999999999986
Q ss_pred CCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 321 LADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 321 gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
+++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 148 -~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 148 -ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp -CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred -CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999865
No 36
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=248.47 Aligned_cols=190 Identities=16% Similarity=0.095 Sum_probs=149.1
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcC------CCCcccccCCCcHHHHH------HHHHHHhccCCCCCCCCcCCC
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRS------DLDTISIEKELPTEVAE------EIRMLRLKSFPDDENTAVEVD 262 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~------~~d~~~~~~~lpl~ia~------~I~~ll~~~~~~~~~~~~~in 262 (587)
+..+.++|+.|+..|+..+++..++..... ........+.+|++.+. .++.+++ ..|+++|
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll-------~~Gadvn 80 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVP-------ASGLGVN 80 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------------CCCCTT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHH-------HCCCCCC
Confidence 667789999999999966655555433221 11222334667777552 2333332 2567899
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHH
Q 007849 263 PLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIG 338 (587)
Q Consensus 263 ~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~A 338 (587)
..|.+|+||||+|+..|+.++|++|++.| ++ +..|.||||+|+..++.++++.|+..+ +++|.+|..|+||||+|
T Consensus 81 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A 159 (269)
T 4b93_B 81 VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYA 159 (269)
T ss_dssp CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999 54 488999999999999999999999886 99999999999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 339 AMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 339 a~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
|..|+.++|++||++|+++|.+|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 160 ~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 160 CSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 999999999999999999999999999999999999999999999999998763
No 37
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.96 E-value=1.7e-27 Score=233.63 Aligned_cols=192 Identities=21% Similarity=0.225 Sum_probs=163.9
Q ss_pred ccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCC
Q 007849 188 NFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVD 262 (587)
Q Consensus 188 di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in 262 (587)
+++.+ +.+|.||||+|+..|...+++..++... ..+..+..+.+|++.+ .++++++.+ .+++++
T Consensus 3 ~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~~~ 71 (237)
T 3b7b_A 3 NFKME--HQNKRSPLHAAAEAGHVDICHMLVQAGA--NIDTCSEDQRTPLMEAAENNHLEAVKYLIK-------AGALVD 71 (237)
T ss_dssp CCCCS--SCCSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-------TTCCCC
T ss_pred Ccccc--cCCCCCHHHHHHHcCcHHHHHHHHHcCC--CcCccCCCCCCHHHHHHHhCCHHHHHHHHh-------CCCCCC
Confidence 34444 8899999999999999555444433211 1222345688999988 446666652 456688
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHH
Q 007849 263 PLREKRIKRIHKALDSDDVELVRLLLSES--EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHI 337 (587)
Q Consensus 263 ~~d~~g~TpLh~A~~~g~~eiv~~LL~~g--~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~ 337 (587)
..+..|.||||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.+++++|+..+ ++++.+|..|.||||+
T Consensus 72 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~ 150 (237)
T 3b7b_A 72 PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHW 150 (237)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHH
Confidence 89999999999999999999999999998 33 478999999999999999999999986 9999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 338 GAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 338 Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
|+..|+.+++++|+++|++++.+|..|+||||+|++.|+.+++++|++.|++++
T Consensus 151 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 151 AAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp HHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 999999999999999999999999999999999999999999999999999865
No 38
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=6.4e-28 Score=241.48 Aligned_cols=185 Identities=17% Similarity=0.145 Sum_probs=158.3
Q ss_pred CChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcH
Q 007849 197 DIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVDPLREKRIKR 271 (587)
Q Consensus 197 ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~Tp 271 (587)
+|.||||+|+..|...+++..++... ..+..+..+.+|++++ .++++++++ .++++|..|..|.||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-------~g~~~~~~~~~g~t~ 72 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLK-------HGAQVNGVTADWHTP 72 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHH-------TTCCTTCCCTTSCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-------CCCCCCCCCCCCCCH
Confidence 57899999999999555444443211 1233356689999988 346666652 346699999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCC-CC--CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHH
Q 007849 272 IHKALDSDDVELVRLLLSES-EI--TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIV 348 (587)
Q Consensus 272 Lh~A~~~g~~eiv~~LL~~g-~i--n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~ 348 (587)
||+|+..|+.+++++|++.| ++ +..|.||||+|+..|+.++++.|+..+ +++|.+|..|+||||+|+..|+.++++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~ 151 (261)
T 2xai_A 73 LFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACENQQRACVK 151 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHhCCHHHHH
Confidence 99999999999999999999 54 477999999999999999999999987 999999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 349 SLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 349 ~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
+|+++|++++. +..|+||||+|++.|+.+++++|++.|++++.
T Consensus 152 ~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 152 KLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQA 194 (261)
T ss_dssp HHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999996 89999999999999999999999999998753
No 39
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=4e-27 Score=231.21 Aligned_cols=189 Identities=19% Similarity=0.168 Sum_probs=164.7
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCC--CCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCCcCCCC
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSD--LDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVDPLREK 267 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~--~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~ 267 (587)
+.+|.||||+|+..|...+++..++.....+ .+..+..+.+|++++ .++++++++ .+++++..+..
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~~~~~~~~ 78 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT-------AGASPMALDRH 78 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCCTTCCCTT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHH-------cCCCccccCCC
Confidence 7889999999999999777777666544332 333455689999988 446666652 34568889999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCC-----CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHHH
Q 007849 268 RIKRIHKALDSDDVELVRLLLSES-----EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRS-SRGYTVLHIG 338 (587)
Q Consensus 268 g~TpLh~A~~~g~~eiv~~LL~~g-----~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d-~~G~TpLh~A 338 (587)
|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ ++++..+ ..|+||||+|
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG-ADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC-CCcccccccCCCcHHHHH
Confidence 999999999999999999999987 22 478999999999999999999999987 9999998 8999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 339 AMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 339 a~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 210 (241)
T 1k1a_A 158 VENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS 210 (241)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999875
No 40
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=7.7e-29 Score=259.93 Aligned_cols=249 Identities=10% Similarity=-0.007 Sum_probs=202.2
Q ss_pred CHHHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhH-HHHHHHHHHcChHHHHHHHHHhccccccccccCCC
Q 007849 120 GYEAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFA-VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDI 198 (587)
Q Consensus 120 ~~~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~-~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng 198 (587)
..+....+...++.|.+ .+++.|+.+|++++..+.. .||||+|+..|..+++++|++++++++. .+|
T Consensus 17 d~~g~t~L~~Aa~~g~~--------~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~----~~g 84 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQT--------DEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL----WHG 84 (364)
T ss_dssp CHHHHHHHHHHHHHTCH--------HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC----BTT
T ss_pred CCCCCCHHHHHHHcCCH--------HHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc----cCC
Confidence 44456666666666654 5678888888888877655 9999999999999999999999996544 478
Q ss_pred hhHHHHHHHhCcHHHHHhhhhhhhcCCC-------------------CcccccCCCcHHHHH-------HHHHHHhccCC
Q 007849 199 IPILLAAFHCQLSQLLAQCVDRIVRSDL-------------------DTISIEKELPTEVAE-------EIRMLRLKSFP 252 (587)
Q Consensus 199 ~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~-------------------d~~~~~~~lpl~ia~-------~I~~ll~~~~~ 252 (587)
.||||+|+..++..+++..++.....+. ...+..+.+|++++. ++++++++
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~--- 161 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ--- 161 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH---
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH---
Confidence 9999999999995555444443111111 113445889999873 46666653
Q ss_pred CCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-C-----CC---CCCchHHHHHHHcCCHHHHHHHHHcCCCC
Q 007849 253 DDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-E-----IT---LDEANALHYAAAYCDPKVLSEVLSLGLAD 323 (587)
Q Consensus 253 ~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~-----in---~~g~tpLh~Aa~~g~~~~v~~LL~~~gad 323 (587)
.++++|..|..|.||||+|+..|+.++|++|++.| + +| ..|+||||+|+..|+.++++.||..| +|
T Consensus 162 ----~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad 236 (364)
T 3ljn_A 162 ----LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG-ID 236 (364)
T ss_dssp ----HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT-CC
T ss_pred ----cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 34669999999999999999999999999999988 5 54 78999999999999999999999986 99
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCC------------CCCCCCcHHHHHHHcCCchhHHHHHhcCC
Q 007849 324 VNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASD------------LTLDGRSAVSICRRLTRPKDYQAKTEQGK 388 (587)
Q Consensus 324 vn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~------------~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 388 (587)
+|.+|..|+||||+|+..|+.++|++||++|++++. .+..|+|||++|+..|+.+.+..|+..+.
T Consensus 237 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~ 313 (364)
T 3ljn_A 237 VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKL 313 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHH
Confidence 999999999999999999999999999999887643 56689999999999998888877777653
No 41
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=7.7e-28 Score=233.89 Aligned_cols=179 Identities=16% Similarity=0.175 Sum_probs=158.1
Q ss_pred ChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCC
Q 007849 174 ELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPD 253 (587)
Q Consensus 174 g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~ 253 (587)
|..+++++|+++|.+++.. .+.+|.||||+|+..|...+++..++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~-~d~~g~t~L~~A~~~g~~~~v~~Ll~---------------------------------- 46 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQ-TDRTGETALHLAARYSRSDAAKRLLE---------------------------------- 46 (223)
T ss_dssp ---CCEETTEETTCCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHH----------------------------------
T ss_pred CcHHHHHHHHHcCCCcccc-cCCCCCchHHHHHHcCCHHHHHHHHH----------------------------------
Confidence 4566778888999988763 25789999999999999776544433
Q ss_pred CCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC--CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC
Q 007849 254 DENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES--EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRS 328 (587)
Q Consensus 254 ~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g--~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d 328 (587)
.+++++..|..|.||||+|+..|+.+++++|++.+ ++ +..|.||||+|+..|+.+++++|+..+ +++|.+|
T Consensus 47 ---~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~ 122 (223)
T 2f8y_A 47 ---ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVD 122 (223)
T ss_dssp ---TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBC
T ss_pred ---cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcC-CCCcCcC
Confidence 33457788999999999999999999999999988 33 478999999999999999999999976 9999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 329 SRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 329 ~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 123 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 185 (223)
T 2f8y_A 123 DLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185 (223)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999865
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=1.4e-28 Score=250.17 Aligned_cols=203 Identities=18% Similarity=0.151 Sum_probs=172.7
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhH-HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhH
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFA-VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPI 201 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~-~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~ 201 (587)
.-..+...+..|.+ .+++.|+.+|++++..+.. .||||+|+..|..+++++|+++|++++.+ +.+|.||
T Consensus 40 ~~t~l~~A~~~g~~--------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--~~~g~tp 109 (299)
T 1s70_B 40 DGAVFLAACSSGDT--------EEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP--DNEGWIP 109 (299)
T ss_dssp HHHHHHHHHHHTCH--------HHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTSCCH
T ss_pred CccHHHHHHHcCCH--------HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCcH
Confidence 34445555566654 4577778888887776654 89999999999999999999999999987 8899999
Q ss_pred HHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCH
Q 007849 202 LLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDV 281 (587)
Q Consensus 202 Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~ 281 (587)
||+|+..|+..+++..++ .+++++..+..|.||||+|+..|+.
T Consensus 110 L~~A~~~g~~~~v~~Ll~-------------------------------------~g~~~~~~~~~g~t~l~~A~~~~~~ 152 (299)
T 1s70_B 110 LHAAASCGYLDIAEYLIS-------------------------------------QGAHVGAVNSEGDTPLDIAEEEAME 152 (299)
T ss_dssp HHHHHHHTCHHHHHHHHH-------------------------------------TTCCTTCCCTTSCCHHHHCCSHHHH
T ss_pred HHHHHHcCCHHHHHHHHh-------------------------------------CCCCCCCcCCCCCCHHHHHHhcchH
Confidence 999999998666443332 3355777889999999999999999
Q ss_pred HHHHHHHhCC--C-----------------------------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCC
Q 007849 282 ELVRLLLSES--E-----------------------------ITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSR 330 (587)
Q Consensus 282 eiv~~LL~~g--~-----------------------------in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~ 330 (587)
++++.|+... + .+..|.||||+|+..|+.++++.||..| +++|.+|..
T Consensus 153 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~ 231 (299)
T 1s70_B 153 ELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYD 231 (299)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTT
T ss_pred HHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCC
Confidence 9998877532 1 2367999999999999999999999876 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 007849 331 GYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRR 373 (587)
Q Consensus 331 G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~ 373 (587)
|+||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.
T Consensus 232 g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred CCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999975
No 43
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-27 Score=252.80 Aligned_cols=217 Identities=12% Similarity=0.150 Sum_probs=177.7
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhcccccccccc-CCChhHHHHHHHhCc----HHHHHhhhhhhhcCCC--CcccccCCC
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGKAVA-EDIIPILLAAFHCQL----SQLLAQCVDRIVRSDL--DTISIEKEL 235 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~-~ng~t~Lh~A~~~g~----~~Ll~~~~~~~~~~~~--d~~~~~~~l 235 (587)
+.++||+|+..+. ++++++.+. +++.+ + .+|.||||+|+..|+ +.|+...+......+. +..+..+.+
T Consensus 94 g~t~L~~Aa~~~~-~~~~~L~~~--~~n~~--d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~T 168 (373)
T 2fo1_E 94 SPIKLHTEAAGSY-AITEPITRE--SVNII--DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENT 168 (373)
T ss_dssp CCCHHHHHHHSSS-CCCSCCSTT--TTTTC--CCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCC
T ss_pred CccHHHHHhcCCc-hHHHHhccc--ccccc--CCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC
Confidence 3789999999665 677777654 44443 4 689999999999997 4444322222222222 223556899
Q ss_pred cHHHH-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC----C---CCCCCchHHHH
Q 007849 236 PTEVA-----EEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES----E---ITLDEANALHY 303 (587)
Q Consensus 236 pl~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g----~---in~~g~tpLh~ 303 (587)
|++++ .++++++++ .++++|..+..|.||||+|+..|+.++|++|++.| + .|..|.||||+
T Consensus 169 pL~~A~~~g~~~iv~~Ll~-------~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~ 241 (373)
T 2fo1_E 169 PLMLAVLARRRRLVAYLMK-------AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 241 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHH-------TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHH
T ss_pred HHHHHHHcChHHHHHHHHH-------CCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHH
Confidence 99988 446777662 35668999999999999999999999999999986 3 35889999999
Q ss_pred HHHcC---CHHHHHHHHHcCCCCccc--------cCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHH
Q 007849 304 AAAYC---DPKVLSEVLSLGLADVNL--------RSSRGYTVLHIGAMRKEPSVIVSLLTKG-ACASDLTLDGRSAVSIC 371 (587)
Q Consensus 304 Aa~~g---~~~~v~~LL~~~gadvn~--------~d~~G~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpL~~A 371 (587)
|+..+ +.+++++|+..+ +++|. +|..|+||||+||..|+.++|++|+++| ++++.+|.+|+||||+|
T Consensus 242 A~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A 320 (373)
T 2fo1_E 242 VAHNEGRDQVASAKLLVEKG-AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLA 320 (373)
T ss_dssp HHHSCSTTHHHHHHHHHHHT-CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHH
T ss_pred HHHhCCcchHHHHHHHHHCC-CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHH
Confidence 99998 899999999987 99886 6789999999999999999999999875 99999999999999999
Q ss_pred HHcCCchhHHHHHhcCCCccC
Q 007849 372 RRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 372 ~~~g~~~~v~~l~~~G~~~~~ 392 (587)
+..|+.+++++|++.|++++.
T Consensus 321 ~~~g~~~iv~~Ll~~gad~~~ 341 (373)
T 2fo1_E 321 AQEGRIEVVMYLIQQGASVEA 341 (373)
T ss_dssp HHHTCHHHHHHHHHTTCCSSC
T ss_pred HHcCCHHHHHHHHHcCCCccC
Confidence 999999999999999998753
No 44
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=2.1e-28 Score=248.66 Aligned_cols=199 Identities=14% Similarity=0.041 Sum_probs=175.0
Q ss_pred ccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcC
Q 007849 145 TCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRS 224 (587)
Q Consensus 145 ~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~ 224 (587)
.+++.|+.+|++++..+ +.||||+|+..|..+++++|+++|++++.+ +..|.||||+|+..++..+++..++
T Consensus 45 ~~v~~Ll~~g~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~--d~~g~t~L~~A~~~g~~~~v~~Ll~----- 116 (285)
T 3kea_A 45 RLVCTLLNAGALKNLLE-NEFPLHQAATLEDTKIVKILLFSGLDDSQF--DDKGNTALYYAVDSGNMQTVKLFVK----- 116 (285)
T ss_dssp HHHHHHHHTTGGGSCCT-TCCHHHHHTTSSSCHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHH-----
T ss_pred HHHHHHHhCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc--CCCCCcHHHHHHHcCCHHHHHHHHh-----
Confidence 45677777777776664 689999999999999999999999999987 8899999999999998665443332
Q ss_pred CCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCC-CcHHHHHHHcCCHHHHHHHHhCC-CC-CC-CCchH
Q 007849 225 DLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKR-IKRIHKALDSDDVELVRLLLSES-EI-TL-DEANA 300 (587)
Q Consensus 225 ~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g-~TpLh~A~~~g~~eiv~~LL~~g-~i-n~-~g~tp 300 (587)
.++++|..+..| .||||+|+..|+.+++++|+++| ++ +. .|+||
T Consensus 117 --------------------------------~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~ 164 (285)
T 3kea_A 117 --------------------------------KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSC 164 (285)
T ss_dssp --------------------------------HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHH
T ss_pred --------------------------------cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccH
Confidence 234577778999 79999999999999999999999 43 43 89999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCccccCCCCChH-HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchh
Q 007849 301 LHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTV-LHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKD 379 (587)
Q Consensus 301 Lh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~Tp-Lh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~ 379 (587)
||+|+..|+.+++++|+..| +++|.+|..|+|| ||+|+..|+.+++++|+++|++++.+|. .|+..|+.++
T Consensus 165 L~~A~~~g~~~~v~~Ll~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~i 236 (285)
T 3kea_A 165 IHITIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSANL-------ENVLLDDAEI 236 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHH
T ss_pred HHHHHHcChHHHHHHHHHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHH
Confidence 99999999999999999996 9999999999998 9999999999999999999999999883 5677899999
Q ss_pred HHHHHhcCCCcc
Q 007849 380 YQAKTEQGKETN 391 (587)
Q Consensus 380 v~~l~~~G~~~~ 391 (587)
+++|+++|++..
T Consensus 237 v~~Ll~~g~~~~ 248 (285)
T 3kea_A 237 AKMIIEKHVEYK 248 (285)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHcCCCCC
Confidence 999999997754
No 45
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=9.8e-28 Score=242.69 Aligned_cols=183 Identities=18% Similarity=0.104 Sum_probs=161.4
Q ss_pred HHHHHHHHcChHHHHHHHHHhccc--cccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 165 EMMYASSIFELPELVSLFQRRLLN--FVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 165 tlL~~A~~~g~~elv~lLl~~g~d--i~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
+++|.|+..+..+.++.+++.+.+ ++.+ +.+|.||||+|+..|+..+++..++
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~--d~~g~T~Lh~A~~~g~~~~v~~Ll~----------------------- 132 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVVNIA--DSNGNTALHYSVSHANFPVVQQLLD----------------------- 132 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHHTCC--CTTSCCHHHHHHHTTCHHHHHHHHH-----------------------
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcCcCC--CCCCCCHHHHHHHCCCHHHHHHHHH-----------------------
Confidence 455777888888888888888777 5555 8899999999999999776444332
Q ss_pred HHHHHhccCCCCCCCCc-CCCcCCCCCCcHHHHHH-----HcCCHHHHHHHHhCC-C---CCCCCchHHHHHHHcCCHHH
Q 007849 243 IRMLRLKSFPDDENTAV-EVDPLREKRIKRIHKAL-----DSDDVELVRLLLSES-E---ITLDEANALHYAAAYCDPKV 312 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~-~in~~d~~g~TpLh~A~-----~~g~~eiv~~LL~~g-~---in~~g~tpLh~Aa~~g~~~~ 312 (587)
.++ ++|..+..|.||||+|+ ..++.+++++|++.| . .|..|+||||+|+.+|+.++
T Consensus 133 --------------~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~ 198 (276)
T 4hbd_A 133 --------------SGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDV 198 (276)
T ss_dssp --------------TSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHH
T ss_pred --------------CCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 222 58888999999999999 678999999999999 3 24679999999999999999
Q ss_pred HHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 313 LSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLT-KGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 313 v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~-~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
++.||..| +++|.+|..|+||||+|+..|+.++|++||+ .|++++.+|.+|+||||+|+..|+.+++++|++++
T Consensus 199 v~~Ll~~g-ad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 199 VKALLACE-ADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHhCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999986 9999999999999999999999999999999 89999999999999999999999999999999875
No 46
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=4.1e-26 Score=222.93 Aligned_cols=187 Identities=17% Similarity=0.132 Sum_probs=160.5
Q ss_pred CCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCCcCCCCCCc
Q 007849 196 EDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVDPLREKRIK 270 (587)
Q Consensus 196 ~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in~~d~~g~T 270 (587)
..+.+|||.|+..|....++..++.... .....+..+.+|++++ .++++++++ .++++|..|..|.|
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-------~g~~~~~~~~~g~t 75 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQ-------LGVPVNDKDDAGWS 75 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCCSCCCCTTSCC
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHH-------hCCCCCCcCCCCCC
Confidence 3456899999999986555544432211 1223355689999988 346666652 34568999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHH
Q 007849 271 RIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSV 346 (587)
Q Consensus 271 pLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~i 346 (587)
|||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ ++++.+|..|+||||+|+..|+.++
T Consensus 76 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~ 154 (231)
T 3aji_A 76 PLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAKGNLKM 154 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCCHHH
Confidence 999999999999999999999 54 578999999999999999999999886 9999999999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 347 IVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 347 v~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
+++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 155 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 199 (231)
T 3aji_A 155 VHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIY 199 (231)
T ss_dssp HHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC
T ss_pred HHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Confidence 999999999999999999999999999999999999999999875
No 47
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=4.2e-27 Score=223.97 Aligned_cols=155 Identities=19% Similarity=0.188 Sum_probs=139.8
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
+.+|.||||+|+..|...+++..++ .+.+++..+..|.||||+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~-------------------------------------~~~~~~~~~~~g~t~L~~ 74 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVE-------------------------------------NFDKLEDKDIEGSTALIW 74 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHH-------------------------------------HHCCTTCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH-------------------------------------hccccccccccCccHHHH
Confidence 7889999999999998555333332 123467778999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 007849 275 ALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSL 350 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~L 350 (587)
|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 153 (192)
T 2rfm_A 75 AVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKL 153 (192)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 54 478999999999999999999999886 99999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 351 LTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 351 L~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
+++|++++.+|..|+||||+|+..|+.+++++|++.|
T Consensus 154 l~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 154 LELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999999999999999999875
No 48
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=9.9e-27 Score=214.65 Aligned_cols=155 Identities=20% Similarity=0.152 Sum_probs=138.6
Q ss_pred CCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHH
Q 007849 196 EDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKA 275 (587)
Q Consensus 196 ~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A 275 (587)
+...+|||.|+..|...+++..++ .+.++|..+..|.||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~-------------------------------------~~~~~~~~~~~g~t~L~~A 45 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQ-------------------------------------NNVNVNAQNGFGRTALQVM 45 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTT-------------------------------------SCCCTTCCCTTSCCHHHHC
T ss_pred chHhhHHHHHHHcCCHHHHHHHHh-------------------------------------CCCCccccCccCccHHHHH
Confidence 445799999999999777554432 3355788899999999999
Q ss_pred HHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 007849 276 LDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLL 351 (587)
Q Consensus 276 ~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL 351 (587)
+. |+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+
T Consensus 46 ~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 123 (162)
T 1ihb_A 46 KL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLV 123 (162)
T ss_dssp CS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred Hc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99 9999999999999 55 478999999999999999999999886 999999999999999999999999999999
Q ss_pred HCCCC-CCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 352 TKGAC-ASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 352 ~~Gad-vn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
++|++ ++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 124 ~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 124 KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99998 699999999999999999999999999999975
No 49
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=1.2e-27 Score=248.17 Aligned_cols=178 Identities=15% Similarity=0.026 Sum_probs=143.6
Q ss_pred ccccccCCCCchh-hh-hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCc-------HHHHHhh
Q 007849 147 VDNICVHDACRPA-IN-FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQL-------SQLLAQC 217 (587)
Q Consensus 147 v~~l~~~~a~~~~-id-~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~-------~~Ll~~~ 217 (587)
++.++.+|++++. .+ .+.||||+|+..|..+++++|+++|++++.+ +.+|.||||+|+..++ ..|++++
T Consensus 113 ~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~--d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~ 190 (327)
T 1sw6_A 113 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYG--DNMGESCLVKAVKSVNNYDSGTFEALLDYL 190 (327)
T ss_dssp HHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBC--CTTCCCHHHHHHHSSHHHHTTCHHHHHHHH
T ss_pred HHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc--CCCCCCHHHHHHHhcccccHHHHHHHHHhh
Confidence 3344445555554 33 4589999999999999999999999999987 8899999999999877 3333332
Q ss_pred hhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHH----cCCHHHHHHHHhC---
Q 007849 218 VDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALD----SDDVELVRLLLSE--- 290 (587)
Q Consensus 218 ~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~----~g~~eiv~~LL~~--- 290 (587)
. +++|.+|..|+||||+|+. .|+.+++++|++.
T Consensus 191 ~----------------------------------------~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~ 230 (327)
T 1sw6_A 191 Y----------------------------------------PCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG 230 (327)
T ss_dssp G----------------------------------------GGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred h----------------------------------------ccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 1 2367779999999999999 9999999999976
Q ss_pred -----------------C-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 007849 291 -----------------S-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVS 349 (587)
Q Consensus 291 -----------------g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~ 349 (587)
| ++ |..|+||||+|+. +++|+.. ++|.+|..|+||||+||..|+.++|++
T Consensus 231 ~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~ 301 (327)
T 1sw6_A 231 WIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDA 301 (327)
T ss_dssp HHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHH
T ss_pred HHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 5 43 4889999999984 7888877 599999999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcC
Q 007849 350 LLTKGACASDLTLDGRSAVSICRRLT 375 (587)
Q Consensus 350 LL~~Gadvn~~d~~G~TpL~~A~~~g 375 (587)
||++||+++.+|.+|+||||+|+++|
T Consensus 302 Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 302 LLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp HHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred HHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 99999999999999999999998764
No 50
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=2.5e-26 Score=214.28 Aligned_cols=155 Identities=21% Similarity=0.235 Sum_probs=139.3
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
...+.++|+.|+..|...+++..++ .+.++|.+|..|.||||+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~-------------------------------------~g~~~~~~~~~g~t~L~~ 53 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMA-------------------------------------NGADVNAEDASGWTPLHL 53 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHH-------------------------------------TTCCTTCCCTTSCCHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHH-------------------------------------CCCCCCCCCCCCCCHHHH
Confidence 4556899999999999777544333 335578889999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 007849 275 ALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSL 350 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~L 350 (587)
|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|
T Consensus 54 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 132 (169)
T 2y1l_E 54 AAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG-ADVNANDMEGHTPLHLAAMFGHLEIVEVL 132 (169)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 54 478999999999999999999999986 99999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 351 LTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 351 L~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
+++|++++.+|..|+||||+|+..|+.+++++|++.|
T Consensus 133 l~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 133 LKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999999876
No 51
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=1.8e-26 Score=214.45 Aligned_cols=155 Identities=17% Similarity=0.096 Sum_probs=140.6
Q ss_pred CChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHH
Q 007849 197 DIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKAL 276 (587)
Q Consensus 197 ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~ 276 (587)
.|.||||.|+..|...+++..++ .+.++|..|..|.||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~-------------------------------------~~~~~~~~~~~g~t~L~~A~ 44 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIE-------------------------------------QENVINHTDEEGFTPLMWAA 44 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHH-------------------------------------HSSCTTCCCTTSCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHH-------------------------------------cCCCcCCCCCCCCCHHHHHH
Confidence 46799999999998776554443 22447788999999999999
Q ss_pred HcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHH
Q 007849 277 DSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLT 352 (587)
Q Consensus 277 ~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~ 352 (587)
..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|++
T Consensus 45 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 45 AHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 54 588999999999999999999999987 9999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 353 KGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 353 ~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
+|++++.+|..|+||||+|+..|+.+++++|.+++..
T Consensus 124 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 124 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988654
No 52
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=4.3e-27 Score=231.26 Aligned_cols=164 Identities=16% Similarity=0.192 Sum_probs=141.6
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
+.+|.||||+|+..|...+++..++.... .++++|..+..|.||||+
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---------------------------------~~~~~~~~~~~g~t~L~~ 51 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKG---------------------------------DLAFLNFQNNLQQTPLHL 51 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC--------------------------------------CCCCCCCCTTCCCHHHH
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhc---------------------------------cHHHhhccCCCCCCHHHH
Confidence 78899999999999985553322221111 235688899999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCC------ccccCCCCChHHHHHHHcCCH
Q 007849 275 ALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLAD------VNLRSSRGYTVLHIGAMRKEP 344 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gad------vn~~d~~G~TpLh~Aa~~g~~ 344 (587)
|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|+..+ ++ ++..+..|+||||+|+..|+.
T Consensus 52 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 130 (236)
T 1ikn_D 52 AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC-TTPHLHSILKATNYNGHTCLHLASIHGYL 130 (236)
T ss_dssp HHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHST-TTTSSSCGGGCCCTTCCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhHHHHhhccCCCCCCHHHHHHHcCCH
Confidence 99999999999999999 55 478999999999999999999999987 44 688899999999999999999
Q ss_pred HHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 345 SVIVSLLTKGACASDLTL-DGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 345 ~iv~~LL~~Gadvn~~d~-~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
++|++|+++|++++.++. .|+||||+|+..|+.+++++|++.|++++.
T Consensus 131 ~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 179 (236)
T 1ikn_D 131 GIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR 179 (236)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 999999999999999998 999999999999999999999999998763
No 53
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.94 E-value=2.5e-26 Score=214.48 Aligned_cols=157 Identities=17% Similarity=0.093 Sum_probs=138.5
Q ss_pred ChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHH
Q 007849 198 IIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALD 277 (587)
Q Consensus 198 g~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~ 277 (587)
+.+|||.|+..|....++..++. .+..+|..|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~------------------------------------~~~~~~~~~~~g~t~L~~A~~ 45 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRK------------------------------------GDNLVNKPDERGFTPLIWASA 45 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTT------------------------------------CSGGGGCCCTTSCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHc------------------------------------CcccccCCCCCCCCHHHHHHH
Confidence 35789999999986664443321 112367778999999999999
Q ss_pred cCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHC
Q 007849 278 SDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTK 353 (587)
Q Consensus 278 ~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~ 353 (587)
.|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++
T Consensus 46 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (172)
T 3v30_A 46 FGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLAR 124 (172)
T ss_dssp TTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999 54 478999999999999999999999886 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 354 GACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 354 Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
|++++.+|..|+||||+|+..|+.+++++|+++|++..
T Consensus 125 ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 125 GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999987643
No 54
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1.2e-26 Score=208.67 Aligned_cols=129 Identities=17% Similarity=0.070 Sum_probs=123.6
Q ss_pred cCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-CCh
Q 007849 259 VEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSR-GYT 333 (587)
Q Consensus 259 ~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~-G~T 333 (587)
+++|..+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+. |+.+++++|+..+ +++|.+|.. |+|
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~~g~t 80 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG-AEPNCADPATLTR 80 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHT-CCSSCCBTTTTBC
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCC-CCCCCcCCCCCCC
Confidence 568999999999999999999999999999999 55 4889999999999 9999999999987 999999999 999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 334 VLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 334 pLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
|||+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|++.|++
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999875
No 55
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=7.2e-26 Score=221.52 Aligned_cols=158 Identities=19% Similarity=0.139 Sum_probs=140.6
Q ss_pred CChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHH
Q 007849 197 DIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKAL 276 (587)
Q Consensus 197 ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~ 276 (587)
.|.||||+|+..|...+++..++. .+.++|.+|..|+||||+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~------------------------------------~g~~~~~~~~~g~t~L~~A~ 45 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKF------------------------------------EGCEVHQRGAMGETALHIAA 45 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTT------------------------------------TCSCTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHh------------------------------------cCCCcccCCCCCCCHHHHHH
Confidence 367999999999987764443321 24568888999999999999
Q ss_pred HcCCHHHHHHHHhCC-CC--------CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC-------------CCChH
Q 007849 277 DSDDVELVRLLLSES-EI--------TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSS-------------RGYTV 334 (587)
Q Consensus 277 ~~g~~eiv~~LL~~g-~i--------n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~-------------~G~Tp 334 (587)
..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|+..+ ++++.++. .|+||
T Consensus 46 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~~~~~~~~~~~~~g~t~ 124 (232)
T 2rfa_A 46 LYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARG-ASVSARATGSVFHYRPHNLIYYGEHP 124 (232)
T ss_dssp HTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSCCTTCSCCCCSSH
T ss_pred HcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCC-CCCCcccCCcceeecccccccCCCCH
Confidence 999999999999998 43 358999999999999999999999986 99998876 79999
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhH----HHHHhcCCCcc
Q 007849 335 LHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDY----QAKTEQGKETN 391 (587)
Q Consensus 335 Lh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v----~~l~~~G~~~~ 391 (587)
||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|++.|++..
T Consensus 125 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 125 LSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 9999999999999999999999999999999999999999999988 99999998754
No 56
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=4.2e-26 Score=211.43 Aligned_cols=156 Identities=19% Similarity=0.212 Sum_probs=137.5
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
+.++.++|+.|+..|....++..++. .+.+++..+..|+||||+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~------------------------------------~~~~~~~~~~~g~t~L~~ 48 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTV------------------------------------QSVNCRDIEGRQSTPLHF 48 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCT------------------------------------TTTTCCCTTTTCCCHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHc------------------------------------CCCCccccccCCCCHHHH
Confidence 56788999999999997775554321 113356678889999999
Q ss_pred HHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 007849 275 ALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSL 350 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~L 350 (587)
|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|
T Consensus 49 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 49 AAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHG-AVVNVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 55 478999999999999999999999986 99999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCC
Q 007849 351 LTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGK 388 (587)
Q Consensus 351 L~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 388 (587)
+++|++++.+|.+|+||||+|+. |+.+++++|.+.|+
T Consensus 128 l~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 128 LQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999999999999999877 99999999999885
No 57
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=6e-27 Score=242.79 Aligned_cols=220 Identities=15% Similarity=0.046 Sum_probs=157.5
Q ss_pred cccccccCCCCchhhhhH-HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcC
Q 007849 146 CVDNICVHDACRPAINFA-VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRS 224 (587)
Q Consensus 146 cv~~l~~~~a~~~~id~~-~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~ 224 (587)
.|+.|+.+|++++..+.. .++++ |..+++++|+++|++.+. +++++|+..... ......
T Consensus 34 lv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~--------~~~~~a~~~~~~-------~~~~~~ 93 (327)
T 1sw6_A 34 LTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEI--------QEMPTSLNNDSS-------NRNSEG 93 (327)
T ss_dssp CCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC------------------------------------
T ss_pred hHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCcc--------ccchHhhhcccc-------cccccc
Confidence 367778888888776544 45544 888999999999987544 345555443100 000000
Q ss_pred CCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCc-CCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCch
Q 007849 225 DLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDP-LREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEAN 299 (587)
Q Consensus 225 ~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~-~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~t 299 (587)
.................++++++. ..++++|. +|..|+||||+|+..|+.++|++||++| ++ |..|+|
T Consensus 94 ~~~~~~~~~~a~~~~~~~~~~~l~-------~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~T 166 (327)
T 1sw6_A 94 GSSNQQQQHVSFDSLLQEVNDAFP-------NTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGES 166 (327)
T ss_dssp ----------CHHHHHHHHHHHCT-------TSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCC
T ss_pred cCCccchhHHHHHhhHHHHHHHHH-------hcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 000000000011223344555554 14567998 8999999999999999999999999999 65 478999
Q ss_pred HHHHHHHcCC---HHHHHHHHHcCCCCccccCCCCChHHHHHHH----cCCHHHHHHHHHCCC-----------------
Q 007849 300 ALHYAAAYCD---PKVLSEVLSLGLADVNLRSSRGYTVLHIGAM----RKEPSVIVSLLTKGA----------------- 355 (587)
Q Consensus 300 pLh~Aa~~g~---~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~----~g~~~iv~~LL~~Ga----------------- 355 (587)
|||+|+.+|+ .+++..||..+++++|.+|..|+||||+|+. .|+.+++++|++.|+
T Consensus 167 pLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~ 246 (327)
T 1sw6_A 167 CLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 246 (327)
T ss_dssp HHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---
T ss_pred HHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhc
Confidence 9999999988 6888888888778999999999999999999 899999999998743
Q ss_pred ----------------------------CCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 356 ----------------------------CASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 356 ----------------------------dvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
++|.+|..|+||||+|++.|+.+++++|++.|++++.
T Consensus 247 ~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~ 311 (327)
T 1sw6_A 247 KESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFI 311 (327)
T ss_dssp -------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTC
T ss_pred ccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 6888999999999999999999999999999999763
No 58
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=1.6e-25 Score=205.21 Aligned_cols=147 Identities=18% Similarity=0.118 Sum_probs=130.4
Q ss_pred ChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHH
Q 007849 198 IIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALD 277 (587)
Q Consensus 198 g~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~ 277 (587)
..++|+.|+..|...+++..++.. .+++ .+..|.||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g-------------------------------------~~~~-~~~~g~t~L~~A~~ 43 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANG-------------------------------------APFT-TDWLGTSPLHLAAQ 43 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHT-------------------------------------CCCC-CCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcC-------------------------------------CCCC-cCCCCCCHHHHHHH
Confidence 358899999999866654443311 2233 37889999999999
Q ss_pred cCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHC
Q 007849 278 SDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTK 353 (587)
Q Consensus 278 ~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~ 353 (587)
.|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++
T Consensus 44 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 44 YGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999999999 54 478999999999999999999999886 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCchhHHHH
Q 007849 354 GACASDLTLDGRSAVSICRRLTRPKDYQAK 383 (587)
Q Consensus 354 Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l 383 (587)
|++++.+|..|+||||+|+..|+.+++++|
T Consensus 123 ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999876
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=1.2e-26 Score=233.36 Aligned_cols=163 Identities=17% Similarity=0.123 Sum_probs=138.1
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCC----cCCCCCCc
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVD----PLREKRIK 270 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in----~~d~~g~T 270 (587)
+..|.||||.|+..|...+++..++.... .+.+++ ..|..|+|
T Consensus 10 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---------------------------------~~~~~~~~~~~~~~~g~t 56 (273)
T 2pnn_A 10 RLYDRRSIFDAVAQSNCQELESLLPFLQR---------------------------------SKKRLTDSEFKDPETGKT 56 (273)
T ss_dssp -CCCHHHHHHHHHTTCSSTTTTHHHHHHH---------------------------------SCCCTTSGGGSCTTTCCC
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHHHhh---------------------------------cccccCCcccccCcCCCC
Confidence 78899999999999985443333332222 112232 34789999
Q ss_pred HHHHHHHc---CCHHHHHHHHhCC-C--------------CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCC---
Q 007849 271 RIHKALDS---DDVELVRLLLSES-E--------------ITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSS--- 329 (587)
Q Consensus 271 pLh~A~~~---g~~eiv~~LL~~g-~--------------in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~--- 329 (587)
|||+|+.. |+.++|++|++.| + .|..|+||||+|+..|+.+++++||..| +++|.++.
T Consensus 57 pL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~ 135 (273)
T 2pnn_A 57 CLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADVQAAANGDF 135 (273)
T ss_dssp HHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGG
T ss_pred HHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCccccccc
Confidence 99999987 9999999999987 3 3458999999999999999999999986 99999997
Q ss_pred -----------CCChHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHcCC---------chhHHHHHhc
Q 007849 330 -----------RGYTVLHIGAMRKEPSVIVSLLT---KGACASDLTLDGRSAVSICRRLTR---------PKDYQAKTEQ 386 (587)
Q Consensus 330 -----------~G~TpLh~Aa~~g~~~iv~~LL~---~Gadvn~~d~~G~TpL~~A~~~g~---------~~~v~~l~~~ 386 (587)
.|+||||+|+..|+.++|++||+ +|++++.+|.+|+||||+|+..|+ .+++++|++.
T Consensus 136 ~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 215 (273)
T 2pnn_A 136 FKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL 215 (273)
T ss_dssp GSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh
Confidence 89999999999999999999999 999999999999999999999998 6889999998
Q ss_pred CCCcc
Q 007849 387 GKETN 391 (587)
Q Consensus 387 G~~~~ 391 (587)
|++++
T Consensus 216 ga~~n 220 (273)
T 2pnn_A 216 GAKLH 220 (273)
T ss_dssp HHHHC
T ss_pred hhhcc
Confidence 88765
No 60
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=1.8e-26 Score=229.65 Aligned_cols=160 Identities=18% Similarity=0.130 Sum_probs=139.1
Q ss_pred ChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCc----CCCCCCcHHH
Q 007849 198 IIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDP----LREKRIKRIH 273 (587)
Q Consensus 198 g~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~----~d~~g~TpLh 273 (587)
|.||||.|+..|....++..+++... .+.++|. .|..|.||||
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~---------------------------------~g~~i~~~~~~~d~~g~t~L~ 48 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRW---------------------------------NSKYLTDSAYTEGSTGKTCLM 48 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHH---------------------------------HTCCTTSGGGSBTTTTBCHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHH---------------------------------cCCCcccccccCCCCCCCHHH
Confidence 78999999999986543333333222 3355776 7999999999
Q ss_pred HHHHc---CCHHHHHHHHhCC-CCC--------------CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCC-----
Q 007849 274 KALDS---DDVELVRLLLSES-EIT--------------LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSR----- 330 (587)
Q Consensus 274 ~A~~~---g~~eiv~~LL~~g-~in--------------~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~----- 330 (587)
+|+.. |+.++|++|++.| +++ ..|+||||+|+..|+.++++.||..| +++|.+|..
T Consensus 49 ~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~ 127 (256)
T 2etb_A 49 KAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENG-ADVHLRACGRFFQK 127 (256)
T ss_dssp HHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCCSGGGSC
T ss_pred HHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccccccccc
Confidence 99999 9999999999998 432 57999999999999999999999986 999999986
Q ss_pred --------CChHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHH--cCCch-------hHHHHHhcCCCc
Q 007849 331 --------GYTVLHIGAMRKEPSVIVSLLT---KGACASDLTLDGRSAVSICRR--LTRPK-------DYQAKTEQGKET 390 (587)
Q Consensus 331 --------G~TpLh~Aa~~g~~~iv~~LL~---~Gadvn~~d~~G~TpL~~A~~--~g~~~-------~v~~l~~~G~~~ 390 (587)
|+||||+|+..|+.++|++||+ +|+++|.+|.+|+||||+|+. .++.+ ++++|++.|+++
T Consensus 128 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 128 HQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999 999999999999999999999 77777 999999998876
Q ss_pred c
Q 007849 391 N 391 (587)
Q Consensus 391 ~ 391 (587)
+
T Consensus 208 ~ 208 (256)
T 2etb_A 208 C 208 (256)
T ss_dssp S
T ss_pred c
Confidence 3
No 61
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=5.8e-26 Score=213.76 Aligned_cols=160 Identities=18% Similarity=0.228 Sum_probs=141.7
Q ss_pred CCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHH
Q 007849 196 EDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKA 275 (587)
Q Consensus 196 ~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A 275 (587)
..+.++|+.|+..|...+++..++. .+.++|..+..|+||||+|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~------------------------------------~~~~~~~~~~~g~t~L~~A 46 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDN------------------------------------TENDLNQGDDHGFSPLHWA 46 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHC------------------------------------TTSCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhc------------------------------------CcccccccCCCCCCHHHHH
Confidence 3467889999999987765443321 1345788899999999999
Q ss_pred HHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 007849 276 LDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLL 351 (587)
Q Consensus 276 ~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL 351 (587)
+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++||..+ +++|.+|..|+||||+|+..|+.+++++|+
T Consensus 47 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 47 CREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 55 478999999999999999999999986 999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 352 TKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 352 ~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
++|++++.+|..|+||||+|+..++.+++++|.+.|++++.
T Consensus 126 ~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 126 ANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp HTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred HCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 99999999999999999999999999999999999998764
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=3.6e-25 Score=202.97 Aligned_cols=150 Identities=15% Similarity=0.091 Sum_probs=135.0
Q ss_pred ChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHH
Q 007849 198 IIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALD 277 (587)
Q Consensus 198 g~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~ 277 (587)
+.++||.|+..|....++..++. . +.++|..+..|.||||+ +.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~-----------------------------------~~~~~~~~~~g~t~L~~-~~ 44 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E-----------------------------------LVHPDALNRFGKTALQV-MM 44 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T-----------------------------------CCCTTCCCTTSCCHHHH-SC
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h-----------------------------------CcCccccCCCCCcHHHH-HH
Confidence 46899999999997775554432 1 13477788999999999 99
Q ss_pred cCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHC
Q 007849 278 SDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTK 353 (587)
Q Consensus 278 ~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~ 353 (587)
.|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..| +++|.+|..|+||||+|+..|+.+++++|+++
T Consensus 45 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 45 FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 99999999999999 55 478999999999999999999999987 99999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhc
Q 007849 354 GACASDLTLDGRSAVSICRRLTRPKDYQAKTEQ 386 (587)
Q Consensus 354 Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~ 386 (587)
++++.+|.+|+||||+|+..|+.+++++|+++
T Consensus 124 -~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 124 -SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp -SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred -cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999999999999999864
No 63
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=5.1e-25 Score=210.36 Aligned_cols=160 Identities=18% Similarity=0.184 Sum_probs=143.5
Q ss_pred CCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHH
Q 007849 196 EDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKA 275 (587)
Q Consensus 196 ~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A 275 (587)
..+.+|||.|+..|....+...+. . .+.++|..|..|.||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~---~---------------------------------~~~~~~~~~~~g~t~L~~A 46 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQ---D---------------------------------TTYQVDEVDTEGNTPLNIA 46 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHT---C---------------------------------TTCCTTCCCTTSCCHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHH---c---------------------------------CCCCCCCCCCCCCCHHHHH
Confidence 456799999999998666443332 1 2235888899999999999
Q ss_pred HHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 007849 276 LDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLL 351 (587)
Q Consensus 276 ~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL 351 (587)
+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|+..++++++.+|..|+||||+|+..|+.+++++|+
T Consensus 47 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 126 (201)
T 3hra_A 47 VHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL 126 (201)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 55 4789999999999999999999998888999999999999999999999999999999
Q ss_pred HCC-CCCCCCCCCCCcHHHHHHHcCC-----chhHHHHHhcCCCcc
Q 007849 352 TKG-ACASDLTLDGRSAVSICRRLTR-----PKDYQAKTEQGKETN 391 (587)
Q Consensus 352 ~~G-advn~~d~~G~TpL~~A~~~g~-----~~~v~~l~~~G~~~~ 391 (587)
++| ++++.+|..|+||||+|+..++ .+++++|++.|++++
T Consensus 127 ~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 127 EDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp HHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred HcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 999 9999999999999999999998 899999999999875
No 64
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.92 E-value=3.1e-25 Score=206.99 Aligned_cols=164 Identities=16% Similarity=0.083 Sum_probs=140.8
Q ss_pred HHHHHHHHHcChHHHHHHHHHhccc-cccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLN-FVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~d-i~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
.++||.|+..|..++++++++.+.+ ++.+ +.+|.||||+|+..++..+++..++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~----------------------- 57 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKP--DERGFTPLIWASAFGEIETVRFLLE----------------------- 57 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCC--CTTSCCHHHHHHHTTCHHHHHHHHH-----------------------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCC--CCCCCCHHHHHHHcCCHHHHHHHHH-----------------------
Confidence 4689999999999999999999887 5555 7889999999999998766444332
Q ss_pred HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHH
Q 007849 243 IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLS 318 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~ 318 (587)
.++++|..+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+.
T Consensus 58 --------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 58 --------------WGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp --------------HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------cCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 23457788999999999999999999999999999 55 4789999999999999999999999
Q ss_pred cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Q 007849 319 LGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSA 367 (587)
Q Consensus 319 ~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~Tp 367 (587)
.| ++++.+|..|+||||+|+..|+.+++++|+++|+++...+..|.||
T Consensus 124 ~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 124 RG-ADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp TT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred cC-CCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 86 9999999999999999999999999999999999999999999987
No 65
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.92 E-value=7.3e-25 Score=202.06 Aligned_cols=153 Identities=14% Similarity=0.081 Sum_probs=136.2
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
..++|+.|+..|..+++++|++++++++.+ +.+|.||||+|+. +...+++..++
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~g~t~L~~A~~-~~~~~v~~Ll~----------------------- 58 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQ--NGFGRTALQVMKL-GNPEIARRLLL----------------------- 58 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCC--CTTSCCHHHHCCS-SCHHHHHHHHH-----------------------
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCcccc--CccCccHHHHHHc-CcHHHHHHHHH-----------------------
Confidence 479999999999999999999999999887 8899999999998 77666443332
Q ss_pred HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHH
Q 007849 243 IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLS 318 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~ 318 (587)
.++++|.++..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+.
T Consensus 59 --------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 124 (162)
T 1ihb_A 59 --------------RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 124 (162)
T ss_dssp --------------TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 33557888999999999999999999999999999 55 4889999999999999999999999
Q ss_pred cCCCC-ccccCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q 007849 319 LGLAD-VNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGAC 356 (587)
Q Consensus 319 ~~gad-vn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad 356 (587)
.+ ++ ++.+|..|+||||+|+..|+.+++++|+++|||
T Consensus 125 ~g-~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 125 HT-ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HS-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 98 65 799999999999999999999999999999986
No 66
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=4.7e-24 Score=208.39 Aligned_cols=187 Identities=16% Similarity=0.109 Sum_probs=154.0
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHH-----HHHHHHHhccCCCCCCCCcCCCcC-CCCC
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVA-----EEIRMLRLKSFPDDENTAVEVDPL-REKR 268 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia-----~~I~~ll~~~~~~~~~~~~~in~~-d~~g 268 (587)
++.+.++|+.|+..|...+++..++... ........+.+|++.+ .++++++++.+ .+++.. +..|
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-------~~~~~~~~~~~ 76 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGY--DVRQPDKENVTLLHWAAINNRIDLVKYYISKG-------AIVDQLGGDLN 76 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-------CCTTCCBTTTT
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCC--CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcC-------CcchhhcCCcC
Confidence 6778899999999999555444443221 1222245688999987 34666666332 334433 4559
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCC-
Q 007849 269 IKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKE- 343 (587)
Q Consensus 269 ~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~- 343 (587)
.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ ++++.++..|+||||+|+..++
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRTHS 155 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHCCS
T ss_pred CChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhCCh
Confidence 99999999999999999999999 54 478999999999999999999999986 9999999999999999997776
Q ss_pred HHHHHHHHHCCCCCCCCCC-CCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 344 PSVIVSLLTKGACASDLTL-DGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 344 ~~iv~~LL~~Gadvn~~d~-~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
.+++++|++.|++++..+. .|+||||+|+..|+.+++++|++.|++++
T Consensus 156 ~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 204 (240)
T 3eu9_A 156 VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVD 204 (240)
T ss_dssp STTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8999999999999999997 99999999999999999999999998865
No 67
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.92 E-value=5.5e-24 Score=198.36 Aligned_cols=153 Identities=15% Similarity=0.160 Sum_probs=137.9
Q ss_pred hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHH
Q 007849 162 FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAE 241 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~ 241 (587)
...++|+.|+..|..+++++|+++|++++.+ +.+|.||||+|+..+...+++..++
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~---------------------- 68 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAE--DASGWTPLHLAAFNGHLEIVEVLLK---------------------- 68 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHH----------------------
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHH----------------------
Confidence 3489999999999999999999999999987 8899999999999998766444332
Q ss_pred HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHH
Q 007849 242 EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVL 317 (587)
Q Consensus 242 ~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL 317 (587)
.++++|..|..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+
T Consensus 69 ---------------~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 69 ---------------NGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp ---------------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------------cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 33557788999999999999999999999999999 55 478999999999999999999999
Q ss_pred HcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCC
Q 007849 318 SLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKG 354 (587)
Q Consensus 318 ~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~G 354 (587)
..+ ++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 134 ~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 134 KNG-ADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HcC-CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 986 999999999999999999999999999999886
No 68
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=2.5e-25 Score=221.71 Aligned_cols=163 Identities=17% Similarity=0.123 Sum_probs=136.9
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcC----CCCCCc
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPL----REKRIK 270 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~----d~~g~T 270 (587)
+..+.++||.|+..|....++..+++... .+.+++.. |..|.|
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~---------------------------------~~~~~~~~~~~~~~~g~t 48 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLT---------------------------------HKKRLTDEEFREPSTGKT 48 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHH---------------------------------HTCCTTSGGGSCTTTCCC
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHh---------------------------------cCCCcchhhhhccCCCCc
Confidence 34578999999999986543333333222 12334433 477999
Q ss_pred HHHHHH---HcCCHHHHHHHHhCC-CC--------------CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC----
Q 007849 271 RIHKAL---DSDDVELVRLLLSES-EI--------------TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRS---- 328 (587)
Q Consensus 271 pLh~A~---~~g~~eiv~~LL~~g-~i--------------n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d---- 328 (587)
|||+|+ ..|+.++|++|++.| +. |..|+||||+|+..|+.+++++||..| +++|.++
T Consensus 49 ~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~ 127 (260)
T 3jxi_A 49 CLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKG-ADVHAQARGRF 127 (260)
T ss_dssp HHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCEECC
T ss_pred HHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCC-CCcCccccccc
Confidence 999999 779999999999987 31 238999999999999999999999986 9999999
Q ss_pred ----------CCCChHHHHHHHcCCHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHHcCC---------chhHHHHHhc
Q 007849 329 ----------SRGYTVLHIGAMRKEPSVIVSLLT---KGACASDLTLDGRSAVSICRRLTR---------PKDYQAKTEQ 386 (587)
Q Consensus 329 ----------~~G~TpLh~Aa~~g~~~iv~~LL~---~Gadvn~~d~~G~TpL~~A~~~g~---------~~~v~~l~~~ 386 (587)
..|+||||+|+..|+.++|++||+ +|++++.+|..|+||||+|+..++ .+++++|++.
T Consensus 128 ~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 207 (260)
T 3jxi_A 128 FQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK 207 (260)
T ss_dssp CSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh
Confidence 689999999999999999999999 999999999999999999999888 5899999999
Q ss_pred CCCcc
Q 007849 387 GKETN 391 (587)
Q Consensus 387 G~~~~ 391 (587)
|++++
T Consensus 208 ga~~~ 212 (260)
T 3jxi_A 208 CAKLF 212 (260)
T ss_dssp HHHHC
T ss_pred Ccccc
Confidence 88764
No 69
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.1e-24 Score=195.63 Aligned_cols=123 Identities=21% Similarity=0.212 Sum_probs=115.3
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007849 264 LREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGA 339 (587)
Q Consensus 264 ~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa 339 (587)
....|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 3567899999999999999999999999 55 478999999999999999999999886 999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 340 MRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 340 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
..|+.+++++|+++|++++.+|.+|+||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999876
No 70
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=3.4e-24 Score=188.24 Aligned_cols=122 Identities=27% Similarity=0.347 Sum_probs=116.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007849 267 KRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRK 342 (587)
Q Consensus 267 ~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g 342 (587)
+|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ ++++.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCcHHHHHHHcC
Confidence 5899999999999999999999999 54 578999999999999999999999986 999999999999999999999
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 343 EPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 343 ~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999975
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.91 E-value=5.3e-25 Score=217.54 Aligned_cols=157 Identities=17% Similarity=0.152 Sum_probs=116.6
Q ss_pred CCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHH
Q 007849 196 EDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKA 275 (587)
Q Consensus 196 ~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A 275 (587)
..|.||||.|+..+....++..++ .+++++. +..|.||||+|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~-------------------------------------~g~~~~~-~~~~~t~L~~A 44 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIA-------------------------------------HGMRVKF-NPLPLALLLDS 44 (239)
T ss_dssp ------------------------------------------------------------------------CHHHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhc-------------------------------------cCCCccc-CchhhHHHHHH
Confidence 457889999988877554332221 2333554 46789999999
Q ss_pred HHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH
Q 007849 276 LDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLL 351 (587)
Q Consensus 276 ~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL 351 (587)
+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++||..+ +++|.+|..|+||||+|+..|+.++|++|+
T Consensus 45 ~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 45 SLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp HHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999999 55 488999999999999999999999986 999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCC-cHHHHH--HHcCCchhHHHHHhcCCCcc
Q 007849 352 TKGACASDLTLDGR-SAVSIC--RRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 352 ~~Gadvn~~d~~G~-TpL~~A--~~~g~~~~v~~l~~~G~~~~ 391 (587)
++|++++.++..|. ||||+| +..|+.+++++|++.|++++
T Consensus 124 ~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 124 ESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 99999999998887 999999 78899999999999988754
No 72
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.91 E-value=1.7e-24 Score=205.93 Aligned_cols=130 Identities=18% Similarity=0.187 Sum_probs=124.3
Q ss_pred CCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHH
Q 007849 261 VDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLH 336 (587)
Q Consensus 261 in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh 336 (587)
+|.+|..|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ ++++.+|..|+||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG-SNVNTKDFSGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHH
Confidence 6778999999999999999999999999998 54 478999999999999999999999997 999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 337 IGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 337 ~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 161 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADIS 161 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999865
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=5e-27 Score=231.06 Aligned_cols=180 Identities=11% Similarity=-0.002 Sum_probs=156.7
Q ss_pred hHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHH
Q 007849 162 FAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAE 241 (587)
Q Consensus 162 ~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~ 241 (587)
...++||.|+..|..+++++|++.|++++.+ +.+|.||||+|+..+...+++..++
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--d~~g~tpLh~A~~~g~~~~v~~Ll~---------------------- 75 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQP--NEEGITALHNAICGANYSIVDFLIT---------------------- 75 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHH----------------------
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHH----------------------
Confidence 3589999999999999999999999999987 8999999999999998766443332
Q ss_pred HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCC----CCCchHHHHH--HHcCCHHHHH
Q 007849 242 EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EIT----LDEANALHYA--AAYCDPKVLS 314 (587)
Q Consensus 242 ~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~in----~~g~tpLh~A--a~~g~~~~v~ 314 (587)
.++++|.+|..|+||||+|+..|+.++|++|++.| +++ ..|+||||+| +..|+.++++
T Consensus 76 ---------------~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 76 ---------------AGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp ---------------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred ---------------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 34568888999999999999999999999999999 553 5899999999 9999999999
Q ss_pred HHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCchhHHHHH
Q 007849 315 EVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGAC--ASDLTLDGRSAVSICRRLTRPKDYQAKT 384 (587)
Q Consensus 315 ~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gad--vn~~d~~G~TpL~~A~~~g~~~~v~~l~ 384 (587)
+|+..| +++|.+|..|.||||.++..+. +++|++.|++ ++.+|.+|+||||+|++.|+.++|+...
T Consensus 141 ~Ll~~g-a~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 141 YLADVE-QSMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp HHHHHH-HHTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred HHHHcC-CCcccccCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 999987 9999999999999997666543 3688899998 7889999999999999999998886543
No 74
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=6.3e-25 Score=202.14 Aligned_cols=130 Identities=19% Similarity=0.109 Sum_probs=115.6
Q ss_pred CCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCh-HH
Q 007849 261 VDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYT-VL 335 (587)
Q Consensus 261 in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~T-pL 335 (587)
.+..+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+ .|+.+++++||..+ +++|.+|..|+| ||
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPV 82 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHH
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHH
Confidence 3455788999999999999999999999999 55 478999999996 99999999999886 999999999999 99
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 336 HIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 336 h~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
|+|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred HHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999999999999999999999999999999998653
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.91 E-value=6.6e-24 Score=199.63 Aligned_cols=162 Identities=13% Similarity=0.106 Sum_probs=143.3
Q ss_pred HHHHHHHHHHcChHHHHHHHHHh-ccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRR-LLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAE 241 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~-g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~ 241 (587)
..++|+.|+..|..+++++|++. +.+++.+ +.+|.||||+|+..+...+++..++
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~---------------------- 60 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQG--DDHGFSPLHWACREGRSAVVEMLIM---------------------- 60 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHH----------------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCccccccc--CCCCCCHHHHHHHcCcHHHHHHHHH----------------------
Confidence 37789999999999999999998 5667776 8899999999999998766443332
Q ss_pred HHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHH
Q 007849 242 EIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVL 317 (587)
Q Consensus 242 ~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL 317 (587)
.++++|..|..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.++++.|+
T Consensus 61 ---------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 61 ---------------RGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp ---------------TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 34558888999999999999999999999999999 55 488999999999999999999999
Q ss_pred HcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Q 007849 318 SLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDG 364 (587)
Q Consensus 318 ~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G 364 (587)
..| ++++.+|..|+||||+|+..++.+++++|+++|++++..+..+
T Consensus 126 ~~g-a~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 126 ANG-ALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp HTT-CCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCCCC
T ss_pred HCC-CCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCccc
Confidence 986 9999999999999999999999999999999999999877655
No 76
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.91 E-value=6.2e-24 Score=197.16 Aligned_cols=155 Identities=14% Similarity=0.074 Sum_probs=139.2
Q ss_pred HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEI 243 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I 243 (587)
.++||.|+..|..+++++|++.+.+++.+ +.+|.||||+|+..++..+++..++
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~------------------------ 57 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINHT--DEEGFTPLMWAAAHGQIAVVEFLLQ------------------------ 57 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTCC--CTTSCCHHHHHHHTTCHHHHHHHHH------------------------
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCCC--CCCCCCHHHHHHHCCCHHHHHHHHH------------------------
Confidence 57899999999999999999999998887 8899999999999998766444332
Q ss_pred HHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHc
Q 007849 244 RMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSL 319 (587)
Q Consensus 244 ~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~ 319 (587)
.++++|..+..|.||||+|+..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..
T Consensus 58 -------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 124 (167)
T 3v31_A 58 -------------NGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124 (167)
T ss_dssp -------------TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -------------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 33557778999999999999999999999999999 54 47899999999999999999999997
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCC
Q 007849 320 GLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACAS 358 (587)
Q Consensus 320 ~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn 358 (587)
+ ++++.+|..|+||||+|+..|+.+++++|+++++++.
T Consensus 125 g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 125 G-ADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred C-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 6 9999999999999999999999999999999876654
No 77
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.91 E-value=3.4e-23 Score=189.63 Aligned_cols=146 Identities=16% Similarity=0.129 Sum_probs=132.1
Q ss_pred HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEI 243 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I 243 (587)
.++|+.|+..|..+++++|++.|.+++. +..|.||||+|+..+...+++..++
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~g~t~L~~A~~~~~~~~v~~Ll~------------------------ 55 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFTT---DWLGTSPLHLAAQYGHFSTTEVLLR------------------------ 55 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCCC---CTTCCCHHHHHHHHTCHHHHHHHHT------------------------
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHH------------------------
Confidence 6899999999999999999999998875 8899999999999998766444332
Q ss_pred HHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHc
Q 007849 244 RMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSL 319 (587)
Q Consensus 244 ~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~ 319 (587)
.++++|..+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..
T Consensus 56 -------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 122 (153)
T 1awc_B 56 -------------AGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122 (153)
T ss_dssp -------------TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred -------------cCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 33557888999999999999999999999999999 55 47899999999999999999999998
Q ss_pred CCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 007849 320 GLADVNLRSSRGYTVLHIGAMRKEPSVIVSL 350 (587)
Q Consensus 320 ~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~L 350 (587)
| ++++.+|..|+||||+|+..|+.+++++|
T Consensus 123 g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 123 G-ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp T-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred C-CCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 6 99999999999999999999999999987
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.90 E-value=4.8e-25 Score=217.82 Aligned_cols=173 Identities=13% Similarity=0.023 Sum_probs=124.5
Q ss_pred HHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 163 AVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 163 ~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
+.|+|+.|+..+..++++.|+++|++++. ...+.||||.|+..|...+++..++
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~----------------------- 58 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIY----------------------- 58 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTS-----------------------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHH-----------------------
Confidence 48999999999999999999999999987 6788999999999999777544332
Q ss_pred HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHH
Q 007849 243 IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLS 318 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~ 318 (587)
.++++|.+|..|.||||+|+..|+.++|++|+++| ++ |..|+||||+|+..|+.++++.||.
T Consensus 59 --------------~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 59 --------------EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp --------------TTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred --------------cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 34568888999999999999999999999999999 55 4889999999999999999999999
Q ss_pred cCCCCccccCCCCC-hHHHHH--HHcCCHHHHHHHHHCCCCCCCC---------CCCCCcHHHHHHHcCC
Q 007849 319 LGLADVNLRSSRGY-TVLHIG--AMRKEPSVIVSLLTKGACASDL---------TLDGRSAVSICRRLTR 376 (587)
Q Consensus 319 ~~gadvn~~d~~G~-TpLh~A--a~~g~~~iv~~LL~~Gadvn~~---------d~~G~TpL~~A~~~g~ 376 (587)
.+ +++|.++..|. ||||+| +..|+.+++++|+++|++++.. +..|++|++++...|.
T Consensus 125 ~g-a~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 125 SG-AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp TT-CCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cC-CCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 86 99999998887 999999 8899999999999999999877 5668888888877665
No 79
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=8.8e-25 Score=196.37 Aligned_cols=127 Identities=19% Similarity=0.123 Sum_probs=113.3
Q ss_pred CCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHH
Q 007849 260 EVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVL 335 (587)
Q Consensus 260 ~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpL 335 (587)
++ .+|..|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ ++++.+|..|+|||
T Consensus 3 d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L 80 (137)
T 3c5r_A 3 DP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-ALVNTTGYQNDSPL 80 (137)
T ss_dssp -C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCGGGCCHH
T ss_pred CC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CcccCcCCCCCCHH
Confidence 44 56899999999999999999999999999 55 478999999999999999999999886 99999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCC
Q 007849 336 HIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGK 388 (587)
Q Consensus 336 h~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 388 (587)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..+++.++.+.+.
T Consensus 81 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 99999999999999999999999999999999999998877777766655543
No 80
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=1.8e-23 Score=193.69 Aligned_cols=127 Identities=22% Similarity=0.251 Sum_probs=119.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCC--C---CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007849 265 REKRIKRIHKALDSDDVELVRLLLSES--E---ITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGA 339 (587)
Q Consensus 265 d~~g~TpLh~A~~~g~~eiv~~LL~~g--~---in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa 339 (587)
|..|.||||.|+..|+.++|+.|++.+ + .+..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHG-ADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcC-CCCCccCCCCCCHHHHHH
Confidence 678899999999999999999999966 2 3477899999999999999999999986 999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccC
Q 007849 340 MRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 340 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~ 392 (587)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++.
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 136 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK 136 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 99999999999999999999999999999999999999999999999998753
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.90 E-value=4.4e-24 Score=203.26 Aligned_cols=126 Identities=10% Similarity=0.035 Sum_probs=111.7
Q ss_pred CCcCC-CCCCcHHHHHHHcCCH----HHHHHHHhCC-CCC---CCCchHHHHHHHcCC------HHHHHHHHHcCCCCcc
Q 007849 261 VDPLR-EKRIKRIHKALDSDDV----ELVRLLLSES-EIT---LDEANALHYAAAYCD------PKVLSEVLSLGLADVN 325 (587)
Q Consensus 261 in~~d-~~g~TpLh~A~~~g~~----eiv~~LL~~g-~in---~~g~tpLh~Aa~~g~------~~~v~~LL~~~gadvn 325 (587)
+|..+ ..|+||||+|+..|+. ++|++||+.| ++| ..|+||||+|+..|+ .++++.||..| +|+|
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~G-adin 108 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKG-ADIT 108 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTT-CCSS
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCC-CCCC
Confidence 33444 6799999999999985 5999999999 664 789999999999987 57788888876 9999
Q ss_pred ccCCCCC-hHHHHHHHcC-----CHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcC
Q 007849 326 LRSSRGY-TVLHIGAMRK-----EPSVIVSLLT-KGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQG 387 (587)
Q Consensus 326 ~~d~~G~-TpLh~Aa~~g-----~~~iv~~LL~-~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G 387 (587)
.+|..|+ ||||+|+..+ +.+++++||+ +|++++.+|..|+||||+|++.|+.+++++|.+..
T Consensus 109 ~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 109 ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999 9999999944 4679999999 99999999999999999999999999999988654
No 82
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=212.63 Aligned_cols=130 Identities=15% Similarity=0.129 Sum_probs=122.2
Q ss_pred CCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC--CC---CCCCchHHHHHH-----HcCCHHHHHHHHHcCCCCccccCCC
Q 007849 261 VDPLREKRIKRIHKALDSDDVELVRLLLSES--EI---TLDEANALHYAA-----AYCDPKVLSEVLSLGLADVNLRSSR 330 (587)
Q Consensus 261 in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g--~i---n~~g~tpLh~Aa-----~~g~~~~v~~LL~~~gadvn~~d~~ 330 (587)
+|..|.+|+||||+|+..|+.++|++|++.| ++ |..|.||||+|+ ..++.++++.|+..+ ++++..|..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g-~~~~~~~~~ 182 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLG-NINAKASQA 182 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHS-CTTCCCTTT
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcC-CCccccCCC
Confidence 6778999999999999999999999999999 43 488999999999 668899999999987 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHh-cCCCcc
Q 007849 331 GYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTE-QGKETN 391 (587)
Q Consensus 331 G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~-~G~~~~ 391 (587)
|+||||+|+..|+.++|++||++|+++|.+|.+|+||||+|+..|+.+++++|++ .|++++
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~ 244 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS 244 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999 888865
No 83
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.89 E-value=1.6e-22 Score=185.28 Aligned_cols=148 Identities=14% Similarity=0.117 Sum_probs=130.5
Q ss_pred HHHHHHHHHcChHHHHHHHHHh-ccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRR-LLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~-g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
.++|+.|+..|..+++++|++. +.+++.. +.+|.||||+ +..+...+++..++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--~~~g~t~L~~-~~~~~~~~v~~Ll~----------------------- 56 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDAL--NRFGKTALQV-MMFGSTAIALELLK----------------------- 56 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCC--CTTSCCHHHH-SCTTCHHHHHHHHH-----------------------
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCcccc--CCCCCcHHHH-HHcCCHHHHHHHHH-----------------------
Confidence 6899999999999999999998 3377766 8899999999 88887665433322
Q ss_pred HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHH
Q 007849 243 IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLS 318 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~ 318 (587)
.++++|.+|..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+.
T Consensus 57 --------------~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 57 --------------QGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp --------------TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred --------------CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence 34558888999999999999999999999999999 54 4789999999999999999999998
Q ss_pred cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHC
Q 007849 319 LGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTK 353 (587)
Q Consensus 319 ~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~ 353 (587)
. ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 123 ~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 123 E--SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp T--SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred c--cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 7 99999999999999999999999999999974
No 84
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=2.6e-23 Score=191.29 Aligned_cols=139 Identities=14% Similarity=0.043 Sum_probs=108.0
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
++.+.||||+|+..|...+++..++ .++++|..|..|.||||+
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~-------------------------------------~g~~~~~~~~~g~t~L~~ 51 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLE-------------------------------------AGANPNAPNSYGRRPIQV 51 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHT-------------------------------------TTCCTTCCCSSSCCTTTS
T ss_pred CccchHHHHHHHHcCCHHHHHHHHH-------------------------------------cCCCCCCCCCCCCCHHHH
Confidence 6778999999999999777544332 345588889999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CC---CCCCch-HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 007849 275 ALDSDDVELVRLLLSES-EI---TLDEAN-ALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVS 349 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~g-~i---n~~g~t-pLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~ 349 (587)
|+ .|+.++|++|++.| ++ |..|+| |||+|+..|+.+++++||..+ +++|.+|..|+||||+|+..|+.+++++
T Consensus 52 A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 52 MM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp SC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 96 99999999999999 55 478998 999999999999999999986 9999999999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCCcHHHHHH
Q 007849 350 LLTKGACASDLTLDGRSAVSICR 372 (587)
Q Consensus 350 LL~~Gadvn~~d~~G~TpL~~A~ 372 (587)
|+++|++++.+|..|.||.+-+.
T Consensus 130 Ll~~ga~~~~~~~~g~t~~~~~~ 152 (156)
T 1bi7_B 130 LRAAAGGTRGSNHARIDAAEGPS 152 (156)
T ss_dssp HSSCC------------------
T ss_pred HHHcCCCCCccCcCcCcccccCC
Confidence 99999999999999999987543
No 85
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=2.3e-23 Score=183.59 Aligned_cols=108 Identities=25% Similarity=0.249 Sum_probs=100.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHH
Q 007849 265 REKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAM 340 (587)
Q Consensus 265 d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~ 340 (587)
+..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAVY 82 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHH
Confidence 567899999999999999999999999 55 478999999999999999999999886 9999999999999999999
Q ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 007849 341 RKEPSVIVSLLTKGACASDLTLDGRSAVSICRR 373 (587)
Q Consensus 341 ~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~ 373 (587)
.|+.+++++|+++|++++.+|.+|+||||+|..
T Consensus 83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999999943
No 86
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.1e-23 Score=205.07 Aligned_cols=128 Identities=16% Similarity=0.188 Sum_probs=113.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007849 264 LREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGA 339 (587)
Q Consensus 264 ~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa 339 (587)
.+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+||..|+.+++++||..+|+++|.+|..|+||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 4678999999999999999999999999 55 4889999999999999999999999866999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 340 MRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 340 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
..|+.++|++||++|++++.+|.+|+||||+|+..++.++++.+.+.|+...
T Consensus 149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 9999999999999999999999999999999999999999999999988743
No 87
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.88 E-value=2.8e-23 Score=204.20 Aligned_cols=131 Identities=21% Similarity=0.254 Sum_probs=121.5
Q ss_pred CCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHH
Q 007849 261 VDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLH 336 (587)
Q Consensus 261 in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh 336 (587)
.+..+..|.||||+|+..|+.++|++|++.| ++ |..|+||||+|+..|+.+++++||..| +++|.+|..|+||||
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~tpLh 92 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAG-ANVNSPDSHGWTPLH 92 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHH
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHH
Confidence 3445667889999999999999999999999 55 488999999999999999999999886 999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCC-CCCCcHHHHH--HHcCCchhHHHHHhcCCCccC
Q 007849 337 IGAMRKEPSVIVSLLTKGACASDLT-LDGRSAVSIC--RRLTRPKDYQAKTEQGKETNK 392 (587)
Q Consensus 337 ~Aa~~g~~~iv~~LL~~Gadvn~~d-~~G~TpL~~A--~~~g~~~~v~~l~~~G~~~~~ 392 (587)
+|+..|+.++|++|+++|++++.++ .+|+||||+| +..|+.+++++|++.|++++.
T Consensus 93 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 93 CAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL 151 (229)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT
T ss_pred HHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc
Confidence 9999999999999999999999997 5999999999 999999999999999988654
No 88
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=1.8e-22 Score=181.26 Aligned_cols=129 Identities=13% Similarity=0.050 Sum_probs=114.0
Q ss_pred cccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCC
Q 007849 187 LNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLRE 266 (587)
Q Consensus 187 ~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~ 266 (587)
++++.+ +..|.||||+|+..+...+++..++ .++++|.+|.
T Consensus 3 ~~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~-------------------------------------~g~~~~~~~~ 43 (136)
T 1d9s_A 3 PGIHML--GGSSDAGLATAAARGQVETVRQLLE-------------------------------------AGADPNALNR 43 (136)
T ss_dssp CCCSCC--CCCCSCHHHHHHHTTCHHHHHHHHH-------------------------------------TTCCTTCCCT
T ss_pred CCccCC--CCCCccHHHHHHHcCCHHHHHHHHH-------------------------------------cCCCcCCcCC
Confidence 455665 7889999999999998766444332 3355888899
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC-CCC---CC-CchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHc
Q 007849 267 KRIKRIHKALDSDDVELVRLLLSES-EIT---LD-EANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMR 341 (587)
Q Consensus 267 ~g~TpLh~A~~~g~~eiv~~LL~~g-~in---~~-g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~ 341 (587)
.|+||||+|+. |+.+++++|++.| +++ .. |+||||+|+..|+.+++++|+..+ ++++.+|..|+||||+|+..
T Consensus 44 ~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 44 FGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG-ARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp TCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC-CCCCCCSSSSSCHHHHHHHH
T ss_pred CCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHc
Confidence 99999999999 9999999999999 654 66 999999999999999999999886 99999999999999999999
Q ss_pred CCHHHHHHHHHCCCC
Q 007849 342 KEPSVIVSLLTKGAC 356 (587)
Q Consensus 342 g~~~iv~~LL~~Gad 356 (587)
|+.+++++|+++|||
T Consensus 122 ~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 122 GHRDIARYLHAATGD 136 (136)
T ss_dssp TCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999986
No 89
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.87 E-value=4.7e-23 Score=194.88 Aligned_cols=122 Identities=21% Similarity=0.270 Sum_probs=109.8
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHHHH
Q 007849 265 REKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRS-SRGYTVLHIGA 339 (587)
Q Consensus 265 d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d-~~G~TpLh~Aa 339 (587)
+..|.||||+|+..|+.+++++|++ | ++ |..|+||||+|+..|+.+++++|+..+ +++|.++ ..|+||||+|+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 5689999999999999999999999 7 54 588999999999999999999999986 9999998 99999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCC
Q 007849 340 MRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGK 388 (587)
Q Consensus 340 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~ 388 (587)
..|+.+++++|+++|++++.+|.+|+||||+|++.++......++..++
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~ 167 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 167 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHH
Confidence 9999999999999999999999999999999999766655444444433
No 90
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=7.3e-21 Score=192.58 Aligned_cols=124 Identities=15% Similarity=0.222 Sum_probs=116.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCC
Q 007849 266 EKRIKRIHKALDSDDVELVRLLLSES-EI---------TLDEANALHYAAAY---CDPKVLSEVLSLGLADVNLRSSRGY 332 (587)
Q Consensus 266 ~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---------n~~g~tpLh~Aa~~---g~~~~v~~LL~~~gadvn~~d~~G~ 332 (587)
....++|+.|+..|+++.++.++..| ++ +..|+||||+|+.. |+.+++++||..| +++|.+|..|+
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~ 206 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCC
T ss_pred chhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCC
Confidence 34568999999999999999999999 53 46799999999999 8999999999996 99999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCc
Q 007849 333 TVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKET 390 (587)
Q Consensus 333 TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~ 390 (587)
||||+|+..|+.++|++||++||+++.+|.+|+||||+|+..|+.+++++|++.|+..
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999999999999999999999998864
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.85 E-value=5.6e-22 Score=196.65 Aligned_cols=108 Identities=23% Similarity=0.290 Sum_probs=101.5
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccC-CCCChHHHHHH
Q 007849 265 REKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRS-SRGYTVLHIGA 339 (587)
Q Consensus 265 d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d-~~G~TpLh~Aa 339 (587)
+..|.||||+|+..|+.++|++|++ | ++ |..|+||||+|+..|+.+++++||..+ +++|.++ ..|+||||+|+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAG-ADLDHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCSSSCCCHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCcCCCCCCCCHHHHHH
Confidence 4579999999999999999999999 7 55 478999999999999999999999986 9999998 88999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Q 007849 340 MRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRL 374 (587)
Q Consensus 340 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~ 374 (587)
..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~ 154 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADIEVEDERGLTALELAREI 154 (244)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999854
No 92
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.85 E-value=3.1e-22 Score=190.43 Aligned_cols=162 Identities=10% Similarity=0.052 Sum_probs=130.0
Q ss_pred HHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHH
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEI 243 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I 243 (587)
.+.|+.|+..|..+.+..+...+.+... +..|.||||+|+..+...-.. ++
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~~~---~~~g~T~Lh~A~~~~~~~~~~--------------------------~i 57 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYEDKE---SVLKSNILYDVLRNNNDEARY--------------------------KI 57 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSSCHH---HHHTTTHHHHHTTCSCHHHHH--------------------------HH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCccccc---ccCCCCHHHHHHHcCCcchHH--------------------------HH
Confidence 4578899999999999888888765433 467999999999988643111 12
Q ss_pred HHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCC------HHHHHHHHhCC-CCC---CCCc-hHHHHHHHcCC---
Q 007849 244 RMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDD------VELVRLLLSES-EIT---LDEA-NALHYAAAYCD--- 309 (587)
Q Consensus 244 ~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~------~eiv~~LL~~g-~in---~~g~-tpLh~Aa~~g~--- 309 (587)
++++++ .|+++|.+|..|+||||+|+..|+ .++|++|+++| ++| ..|+ ||||+|+..+.
T Consensus 58 v~~Ll~-------~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~ 130 (186)
T 3t8k_A 58 SMFLIN-------KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDEN 130 (186)
T ss_dssp HHHHHH-------TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHH
T ss_pred HHHHHH-------CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChh
Confidence 222221 557799999999999999999987 68999999999 665 7788 99999999554
Q ss_pred --HHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Q 007849 310 --PKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLT 361 (587)
Q Consensus 310 --~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d 361 (587)
.++++.||...|+|+|.+|..|+||||+|+..|+.++|++|++...+.+.++
T Consensus 131 ~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 131 EMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 4578888883559999999999999999999999999999998766666554
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.85 E-value=3.4e-21 Score=161.10 Aligned_cols=93 Identities=28% Similarity=0.329 Sum_probs=83.1
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Q 007849 296 DEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLT 375 (587)
Q Consensus 296 ~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g 375 (587)
+|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 4789999999999999999988876 999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHhcCCC
Q 007849 376 RPKDYQAKTEQGKE 389 (587)
Q Consensus 376 ~~~~v~~l~~~G~~ 389 (587)
+.+++++|++.|++
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999998874
No 94
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.85 E-value=4.7e-23 Score=217.40 Aligned_cols=177 Identities=14% Similarity=0.040 Sum_probs=144.8
Q ss_pred HHHHHHHHH-cChHHHHHHHHHhccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHH
Q 007849 164 VEMMYASSI-FELPELVSLFQRRLLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEE 242 (587)
Q Consensus 164 ~tlL~~A~~-~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~ 242 (587)
...++.|.. ++.+++++++.+++.+ +.||||+|+..|+..+++..++....
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~---------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~------------------- 117 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIK---------SEVICFVAAITGCSSALDTLCLLLTS------------------- 117 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCC---------HHHHHHHHHHHCCHHHHHHHTTC--C-------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCC---------cCCHHHHHHHcCCHHHHHHHHHcCCc-------------------
Confidence 455666665 6889999999988654 35999999999997775554432110
Q ss_pred HHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-C-----CCCCCchHHHHHHHcCCHHHHHHH
Q 007849 243 IRMLRLKSFPDDENTAVEVDPLREKRIKRIHKALDSDDVELVRLLLSES-E-----ITLDEANALHYAAAYCDPKVLSEV 316 (587)
Q Consensus 243 I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~-----in~~g~tpLh~Aa~~g~~~~v~~L 316 (587)
....+..+..|.||||+|+..|+.++|++|+++| + ++..++||||+||..|+.++|++|
T Consensus 118 ---------------~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~L 182 (376)
T 2aja_A 118 ---------------DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRL 182 (376)
T ss_dssp ---------------CSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred ---------------HHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHH
Confidence 0012233567889999999999999999999999 4 333349999999999999999999
Q ss_pred HHcCCCCccc--cCCCCChHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 317 LSLGLADVNL--RSSRGYTVLHIGA-MRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 317 L~~~gadvn~--~d~~G~TpLh~Aa-~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
+..| ++++. .|..|+||||+|| ..|+.++|++|+++|++ |+||||+|+..|+.+++++|++.|++.+
T Consensus 183 l~~g-a~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~~ 252 (376)
T 2aja_A 183 CELA-PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRLK 252 (376)
T ss_dssp HHSC-GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHHH
T ss_pred HHcC-CccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHHCCCHHHHHHHHhcCcccc
Confidence 9986 99988 8999999999999 99999999999998853 8999999999999999999999987653
No 95
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=1.3e-20 Score=165.27 Aligned_cols=122 Identities=25% Similarity=0.318 Sum_probs=108.6
Q ss_pred CChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHHHH
Q 007849 197 DIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHKAL 276 (587)
Q Consensus 197 ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~A~ 276 (587)
+|.||||+|+..+...+++..++ .+.+++..+..|.||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~-------------------------------------~~~~~~~~~~~g~t~L~~A~ 43 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLE-------------------------------------AGADVNAKDKNGRTPLHLAA 43 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHH-------------------------------------HTCCTTCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHH-------------------------------------cCCCCCCcCCCCCcHHHHHH
Confidence 57899999999998776554433 22446777899999999999
Q ss_pred HcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHH
Q 007849 277 DSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLT 352 (587)
Q Consensus 277 ~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~ 352 (587)
..|+.+++++|++.| ++ |..|.||||+|+..|+.+++++|+..+ ++++.+|..|+||||+|+..|+.+++++|++
T Consensus 44 ~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 44 RNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 999999999999999 54 478999999999999999999999886 9999999999999999999999999999999
Q ss_pred CCCC
Q 007849 353 KGAC 356 (587)
Q Consensus 353 ~Gad 356 (587)
+|||
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 9986
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.84 E-value=1.5e-20 Score=168.54 Aligned_cols=122 Identities=20% Similarity=0.210 Sum_probs=107.9
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
...+.||||+|+..|...+++..++ .++++|..|..|.||||+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~-------------------------------------~g~~~~~~~~~g~t~L~~ 53 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMA-------------------------------------NGADVNAKDEYGLTPLYL 53 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHH-------------------------------------TTCCTTCCCTTSCCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHH-------------------------------------cCCCCCCcCCCCCCHHHH
Confidence 4567899999999999777554433 335578889999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 007849 275 ALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSL 350 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~L 350 (587)
|+..|+.+++++|++.| ++ |..|.||||+|+..|+.++++.|+..+ ++++.+|..|+||||+|+..|+.+++++|
T Consensus 54 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 54 ATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG-ADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 99999999999999999 55 478999999999999999999999986 99999999999999999999999999999
Q ss_pred HHCC
Q 007849 351 LTKG 354 (587)
Q Consensus 351 L~~G 354 (587)
+++|
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 9987
No 97
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=9.8e-21 Score=207.35 Aligned_cols=124 Identities=19% Similarity=0.238 Sum_probs=114.0
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCC-CC---------CCCCchHHHHHHH---cCCHHHHHHHHHcCCCCccccCCCCChHH
Q 007849 269 IKRIHKALDSDDVELVRLLLSES-EI---------TLDEANALHYAAA---YCDPKVLSEVLSLGLADVNLRSSRGYTVL 335 (587)
Q Consensus 269 ~TpLh~A~~~g~~eiv~~LL~~g-~i---------n~~g~tpLh~Aa~---~g~~~~v~~LL~~~gadvn~~d~~G~TpL 335 (587)
.+.||.|+..|++++|+.||+.| ++ |..|+||||+||. .|+.+++++||..| +|+|.+|.+|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcHH
Confidence 47899999999999999999999 65 4579999999977 89999999999987 99999999999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCCccCc
Q 007849 336 HIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKETNKD 393 (587)
Q Consensus 336 h~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~~~ 393 (587)
|+||..|+.++|++||++||+++.+|.+|+||||+|+..|+.+++++|++.|++++..
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~ 269 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 269 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999997653
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=1.8e-20 Score=197.04 Aligned_cols=125 Identities=18% Similarity=0.127 Sum_probs=115.8
Q ss_pred CCCCCCcHHHHHHHc-CCHHHHHHHHhCC-CCC-----CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHH
Q 007849 264 LREKRIKRIHKALDS-DDVELVRLLLSES-EIT-----LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLH 336 (587)
Q Consensus 264 ~d~~g~TpLh~A~~~-g~~eiv~~LL~~g-~in-----~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh 336 (587)
.+..+.|+||+|+.. |++++|++|++.| ++| ..|.||||+|+..|+.+++++||..+ +++|.+|..|+||||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh 273 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLH 273 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHH
Confidence 345678999999999 9999999999999 654 67999999999999999999999986 999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 337 IGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 337 ~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
+|+..|+.++|++||++||+++.+|.+|+||||+|+..|+.+++++|+..|..
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999988743
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.83 E-value=2.7e-22 Score=211.66 Aligned_cols=53 Identities=8% Similarity=-0.041 Sum_probs=38.9
Q ss_pred HHHHHHHHHcChHHHHHHHHHhccccccc-cccCCChhHHHHHHHhCcHHHHHh
Q 007849 164 VEMMYASSIFELPELVSLFQRRLLNFVGK-AVAEDIIPILLAAFHCQLSQLLAQ 216 (587)
Q Consensus 164 ~tlL~~A~~~g~~elv~lLl~~g~di~~~-~~~~ng~t~Lh~A~~~g~~~Ll~~ 216 (587)
.||||.|+..|..+++++|++.|...... ..+..+.||||+|+..|+..+++.
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~ 146 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNR 146 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHH
Confidence 59999999999999999999998832110 014457899999999999555443
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=2e-20 Score=191.53 Aligned_cols=122 Identities=18% Similarity=0.258 Sum_probs=114.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC-CC---------CCCCchHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCCh
Q 007849 267 KRIKRIHKALDSDDVELVRLLLSES-EI---------TLDEANALHYAAAY---CDPKVLSEVLSLGLADVNLRSSRGYT 333 (587)
Q Consensus 267 ~g~TpLh~A~~~g~~eiv~~LL~~g-~i---------n~~g~tpLh~Aa~~---g~~~~v~~LL~~~gadvn~~d~~G~T 333 (587)
.+.++||.|+..|+++.|+.|++.| ++ +..|+||||+|+.. |+.+++++||..+ +++|.+|..|+|
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g-advn~~d~~G~T 228 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNT 228 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS-SCTTCCCTTCCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC-CCCCCCCCCCCC
Confidence 3567899999999999999999999 54 56899999999997 8999999999996 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhcCCC
Q 007849 334 VLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQGKE 389 (587)
Q Consensus 334 pLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~G~~ 389 (587)
|||+|+..|+.++|++||++||+++.+|.+|+||||+|+..|+.+++++|++.|++
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999998765
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.83 E-value=2.1e-20 Score=191.44 Aligned_cols=107 Identities=21% Similarity=0.210 Sum_probs=93.3
Q ss_pred CCCCCCcHHHHHHHc---CCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHH
Q 007849 264 LREKRIKRIHKALDS---DDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLH 336 (587)
Q Consensus 264 ~d~~g~TpLh~A~~~---g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh 336 (587)
.+..|.||||+|+.. |+.++|++|+++| ++ |..|+||||+|+..|+.++++.||..| +++|.+|..|+||||
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALD 264 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHH
Confidence 578999999999997 8999999999999 65 478999999999999999999999986 999999999999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCc
Q 007849 337 IGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRRLTRP 377 (587)
Q Consensus 337 ~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~~g~~ 377 (587)
+|+..|+.+++++|+++|++ .|.||||+|+.+|+.
T Consensus 265 ~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 265 IARKKHHKECEELLEQAQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHTCHHHHHHHHHHHHH------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcCCc
Confidence 99999999999999999987 589999999998864
No 102
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.82 E-value=2.1e-20 Score=175.24 Aligned_cols=151 Identities=26% Similarity=0.374 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHH
Q 007849 46 NKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFL 125 (587)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~ 125 (587)
..+..+|.+++.++ .||||+|.|+|+.|+|||+||+++|+||++||.+++.+. ....+.+++ +++++|.
T Consensus 19 ~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~---~~~~i~l~~------~~~~~f~ 87 (172)
T 3htm_A 19 CRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEIND------VEPEVFK 87 (172)
T ss_dssp CCHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGG---GTTEEEECS------SCHHHHH
T ss_pred HHHHHHHHHHHhCC--CCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCcccc---CCCeEEecC------CCHHHHH
Confidence 35778999999999 999999999999999999999999999999999988763 335777777 7888999
Q ss_pred HHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHH
Q 007849 126 IFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAA 205 (587)
Q Consensus 126 ~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A 205 (587)
.+|+|+|+|++.+.. +....+|.+|.+++++.+.+.|.++...... .+|+...+.+|
T Consensus 88 ~~l~~~Yt~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~~~~~~A 144 (172)
T 3htm_A 88 EMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILA 144 (172)
T ss_dssp HHHHHHHHSCCTTGG--------------------GTHHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTTHHHHHHHH
T ss_pred HHHHHHhCCCCCCcH--------------------HHHHHHHHHHHHhCcHHHHHHHHHHHHHhCC---HHHHHHHHHHH
Confidence 999999999987543 3348899999999999999999998876655 68899999999
Q ss_pred HHhCcHHHHHhhhhhhhcCCCCccc
Q 007849 206 FHCQLSQLLAQCVDRIVRSDLDTIS 230 (587)
Q Consensus 206 ~~~g~~~Ll~~~~~~~~~~~~d~~~ 230 (587)
..++...|.+.|.+++.+++..+..
T Consensus 145 ~~~~~~~L~~~~~~~i~~~~~~v~~ 169 (172)
T 3htm_A 145 DLHSADQLKTQAVDFINYHATDVLE 169 (172)
T ss_dssp HHTTCHHHHHHHHHHHHHTC-----
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999998766543
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=4.3e-20 Score=154.33 Aligned_cols=89 Identities=31% Similarity=0.425 Sum_probs=83.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcC
Q 007849 267 KRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRK 342 (587)
Q Consensus 267 ~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g 342 (587)
+|+||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcC
Confidence 4899999999999999999999999 55 488999999999999999999999886 999999999999999999999
Q ss_pred CHHHHHHHHHCCCC
Q 007849 343 EPSVIVSLLTKGAC 356 (587)
Q Consensus 343 ~~~iv~~LL~~Gad 356 (587)
+.+++++|+++||+
T Consensus 80 ~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 80 HLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCC
Confidence 99999999999985
No 104
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.2e-20 Score=163.99 Aligned_cols=104 Identities=26% Similarity=0.308 Sum_probs=94.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHH
Q 007849 264 LREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGA 339 (587)
Q Consensus 264 ~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa 339 (587)
+|.+|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ ++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHH
Confidence 5889999999999999999999999999 54 478999999999999999999999886 999999999999999999
Q ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q 007849 340 MRKEPSVIVSLLTKGACASDLTLDGRSAV 368 (587)
Q Consensus 340 ~~g~~~iv~~LL~~Gadvn~~d~~G~TpL 368 (587)
..|+.+++++|+++||++|.++..|.||-
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999874
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.81 E-value=5.4e-20 Score=173.73 Aligned_cols=136 Identities=23% Similarity=0.277 Sum_probs=117.7
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
+.+|.||||+|+..|....++..++ +.++|.+|..|+||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--------------------------------------~~~~~~~d~~g~t~L~~ 82 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--------------------------------------DRDVDAVDENGRTALLF 82 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--------------------------------------TSCTTCCCTTSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--------------------------------------cCCCCCcCCCCCCHHHH
Confidence 4567899999999988666444433 13477889999999999
Q ss_pred HHHcCCHHHHHHHHhCC-CCC----CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 007849 275 ALDSDDVELVRLLLSES-EIT----LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVS 349 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~g-~in----~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~ 349 (587)
|+..|+.++|++|++.| ++| ..|+||||+|+..|+.++++.|+..| +++|.+|..|+||||+|+..++.
T Consensus 83 A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~----- 156 (183)
T 3deo_A 83 VAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILKT----- 156 (183)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHT-CCTTCCCTTSCCHHHHHHHHHHT-----
T ss_pred HHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcC-CCCcCCCCCCCCHHHHHHHhccC-----
Confidence 99999999999999999 653 67999999999999999999999986 99999999999999999986532
Q ss_pred HHHCCCCCCCCCCCCCcHHHHHHHcCCchhHHHHHhc
Q 007849 350 LLTKGACASDLTLDGRSAVSICRRLTRPKDYQAKTEQ 386 (587)
Q Consensus 350 LL~~Gadvn~~d~~G~TpL~~A~~~g~~~~v~~l~~~ 386 (587)
..+.+||++|+..|+.+++++|.++
T Consensus 157 ------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 157 ------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp ------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred ------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 4678999999999999999998765
No 106
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.81 E-value=3e-20 Score=166.64 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=106.7
Q ss_pred ccccccccccCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCC
Q 007849 186 LLNFVGKAVAEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLR 265 (587)
Q Consensus 186 g~di~~~~~~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d 265 (587)
|+|+.. +.+|.||||+|+..+...+++..++ .++++|.+|
T Consensus 1 G~d~~~---~~~g~t~L~~A~~~~~~~~~~~Ll~-------------------------------------~g~~~~~~~ 40 (137)
T 3c5r_A 1 GIDPFT---NHRGETLLHIASIKGDIPSVEYLLQ-------------------------------------NGSDPNVKD 40 (137)
T ss_dssp ---CCC---CTTCCCHHHHHHHHTCHHHHHHHHH-------------------------------------TTCCSCCCC
T ss_pred CCCCCc---CCCCCCHHHHHHHcCCHHHHHHHHH-------------------------------------cCCCCCcCC
Confidence 455533 8899999999999998766444332 335578889
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHc
Q 007849 266 EKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMR 341 (587)
Q Consensus 266 ~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~ 341 (587)
..|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++|+..+ ++++.+|..|+||||+|+..
T Consensus 41 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 41 HAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhc
Confidence 99999999999999999999999999 55 477999999999999999999999886 99999999999999999999
Q ss_pred CCHHHHHHHHHCCCC
Q 007849 342 KEPSVIVSLLTKGAC 356 (587)
Q Consensus 342 g~~~iv~~LL~~Gad 356 (587)
+..+++++|.+.+..
T Consensus 120 ~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 120 SMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHSCC------
T ss_pred cHHHHHhhccccccC
Confidence 999999988876543
No 107
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.80 E-value=6.5e-20 Score=183.36 Aligned_cols=171 Identities=21% Similarity=0.249 Sum_probs=137.7
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+...+.+.|..++.++ .+|||+|.|+|+.|+|||+||+++|+||++||.+++.+.. .....+.+++ ++++
T Consensus 13 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e-~~~~~i~l~~------v~~~ 83 (256)
T 3hve_A 13 QHAARLLRALSSFREES--RFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDD-GSTYKIELEG------ISVM 83 (256)
T ss_dssp TTHHHHHHHHHTCCC----CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC------------CEEECSS------CCHH
T ss_pred HHHHHHHHHHHHHHhcC--CCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCccc-CCCCeEEeCC------CCHH
Confidence 47788999999999999 9999999999999999999999999999999998876311 1345788877 7888
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHH
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPIL 202 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~L 202 (587)
+|..+++|+|+|++.+...+ ...+|.+|..++++.+++.|.++...... .+|+...+
T Consensus 84 ~f~~ll~~~Yt~~~~i~~~~--------------------v~~ll~~A~~l~i~~l~~~c~~~L~~~l~---~~n~~~i~ 140 (256)
T 3hve_A 84 VMREILDYIFSGQIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFLEGCIA---AENCIGIR 140 (256)
T ss_dssp HHHHHHHHHHHSCCCCC-CC--------------------HHHHHHHHHHHTCHHHHHHHHHHHHHTCC---SSTTHHHH
T ss_pred HHHHHHhhccCCCCcccHhH--------------------HHHHHHHHHHHChHHHHHHHHHHHHhhCC---HhhHHHHH
Confidence 99999999999999876544 48999999999999999999999887666 68999999
Q ss_pred HHHHHhCcHHHHHhhhhhhhcCCCCccccc--CCCcHHHHHHHHH
Q 007849 203 LAAFHCQLSQLLAQCVDRIVRSDLDTISIE--KELPTEVAEEIRM 245 (587)
Q Consensus 203 h~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~--~~lpl~ia~~I~~ 245 (587)
.+|..++...|.+.|.+++.+++..+...+ ..+|.+.+..+..
T Consensus 141 ~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~ 185 (256)
T 3hve_A 141 DFALHYCLHHVHYLATEYLETHFRDVSSTEEFLELSPQKLKEVIS 185 (256)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSSCHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcCCHHHHHHHHc
Confidence 999999999999999999998876665443 5667666655554
No 108
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=4.4e-20 Score=179.58 Aligned_cols=133 Identities=20% Similarity=0.186 Sum_probs=103.6
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCCCCCCcHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLREKRIKRIHK 274 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d~~g~TpLh~ 274 (587)
+.+|.||||+|+..|...+++..++ .++++|.+|..|+||||+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~-------------------------------------~g~~~~~~~~~g~t~L~~ 112 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLD-------------------------------------NRVGVNGLDKAGSTALYW 112 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHH-------------------------------------TTCCTTCCCTTSCCHHHH
T ss_pred ccccccccccccccCcHHHHHHHHh-------------------------------------CCCCccccCCCCCCHHHH
Confidence 5667899999999998766444332 335588889999999999
Q ss_pred HHHcCCHHHHHHHHhC-C-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q 007849 275 ALDSDDVELVRLLLSE-S-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVS 349 (587)
Q Consensus 275 A~~~g~~eiv~~LL~~-g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~ 349 (587)
|+..|+.++|++|++. | ++ |..|+||||+|+..|+.+++++||..| ++++.+|..|+||||+|+..|+.++++.
T Consensus 113 A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~l~~ 191 (222)
T 3ehr_A 113 ACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG-ARTDLRNIEKKLAFDMATNAACASLLKK 191 (222)
T ss_dssp HHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHT-CCSCCCCTTSCCHHHHCCSHHHHHHHC-
T ss_pred HHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCccccCCCCCHHHHhcchhHHHHHHH
Confidence 9999999999999998 7 54 588999999999999999999999996 9999999999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCC
Q 007849 350 LLTKGACASDLTLDGR 365 (587)
Q Consensus 350 LL~~Gadvn~~d~~G~ 365 (587)
|++.|++.+..+.+|+
T Consensus 192 l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 192 KQGTDAVRTLSNAEDY 207 (222)
T ss_dssp ----------------
T ss_pred Hhccchhhhccchhhh
Confidence 9999999998887664
No 109
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.78 E-value=6.8e-19 Score=154.78 Aligned_cols=98 Identities=16% Similarity=0.096 Sum_probs=91.4
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 007849 293 ITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICR 372 (587)
Q Consensus 293 in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~ 372 (587)
.+..|.||||+|+..|+.+++++|+..+ +++|.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAKG-EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHTT-CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHcC-CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence 3467899999999999999999999987 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCchhHHHHHhcCCCcc
Q 007849 373 RLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 373 ~~g~~~~v~~l~~~G~~~~ 391 (587)
..|+.+++++|++.|++++
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~ 100 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKT 100 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTT
T ss_pred HcCCHHHHHHHHHcCCCCC
Confidence 9999999999999998865
No 110
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.78 E-value=1.5e-19 Score=183.05 Aligned_cols=174 Identities=19% Similarity=0.191 Sum_probs=142.9
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEc---CeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCcc
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVE---GIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKV 119 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~---g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v 119 (587)
.+...+.+.|.+++.++ .+|||+|.|+ |+.|+|||+||+++|+||++||.++|.++ ....|.++++...+.+
T Consensus 14 ~h~~~ll~~l~~l~~~~--~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~---~~~~i~l~~~~~~~~v 88 (279)
T 3i3n_A 14 SHCSELSWRQNEQRRQG--LFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSES---RSGRVEMRKWSSEPGP 88 (279)
T ss_dssp THHHHHHHHHHHHHHHT--TTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC-----------EEECCCCSSTTCS
T ss_pred hHHHHHHHHHHHHHhcC--CCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccc---cCCeEEeccccccCCC
Confidence 57788999999999999 9999999998 99999999999999999999999998873 3458888865554459
Q ss_pred CHHHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCCh
Q 007849 120 GYEAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDII 199 (587)
Q Consensus 120 ~~~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~ 199 (587)
++++|..+|+|+|+|++.+...+ ...+|.+|..+++..+++.|.++...... .+|+.
T Consensus 89 ~~~~f~~ll~~~Ytg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~c~~~L~~~l~---~~n~~ 145 (279)
T 3i3n_A 89 EPDTVEAVIEYMYTGRIRVSTGS--------------------VHEVLELADRFLLIRLKEFCGEFLKKKLH---LSNCV 145 (279)
T ss_dssp CHHHHHHHHHHHHHSEEEEETTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHHHHCC---TTTHH
T ss_pred CHHHHHHHHHhhCcCCcccCHHH--------------------HHHHHHHHHHHCcHHHHHHHHHHHHHcCC---cchHH
Confidence 99999999999999999775443 48999999999999999999999887666 78999
Q ss_pred hHHHHHHHhCcHHHHHhhhhhhhcCCCCccccc--CCCcHHHHHHHH
Q 007849 200 PILLAAFHCQLSQLLAQCVDRIVRSDLDTISIE--KELPTEVAEEIR 244 (587)
Q Consensus 200 t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~--~~lpl~ia~~I~ 244 (587)
..+.+|..++...|.+.|.+++.+++..+...+ ..+|.+.+..++
T Consensus 146 ~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL 192 (279)
T 3i3n_A 146 AIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWL 192 (279)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHh
Confidence 999999999999999999999999876665444 556666555443
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.77 E-value=2.7e-19 Score=155.25 Aligned_cols=98 Identities=29% Similarity=0.364 Sum_probs=94.4
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q 007849 293 ITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICR 372 (587)
Q Consensus 293 in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~ 372 (587)
.|.+|+||||+|+..|+.+++++|+..+ +++|.+|..|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKG-ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTT-CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 4689999999999999999999999886 999999999999999999999999999999999999999999999999999
Q ss_pred HcCCchhHHHHHhcCCCcc
Q 007849 373 RLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 373 ~~g~~~~v~~l~~~G~~~~ 391 (587)
..|+.+++++|++.|++++
T Consensus 84 ~~~~~~~~~~Ll~~ga~~n 102 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGADVN 102 (115)
T ss_dssp TTTCHHHHHHHHTTSSSHH
T ss_pred HCCCHHHHHHHHHcCCCCC
Confidence 9999999999999999865
No 112
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.77 E-value=1.5e-18 Score=157.86 Aligned_cols=116 Identities=20% Similarity=0.285 Sum_probs=97.4
Q ss_pred hccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCH
Q 007849 42 VFSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGY 121 (587)
Q Consensus 42 ~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~ 121 (587)
..+...+.++|.+++.++ .||||+|.|+|+.|+|||+||++||+||++||.+++.+... ....|.+++ +++
T Consensus 28 ~~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~-~~~~I~l~~------v~~ 98 (144)
T 2ppi_A 28 PQHAARLLRALSSFREES--RFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDG-STYKIELEG------ISV 98 (144)
T ss_dssp TTHHHHHHHHHHHTTC----CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC------CCCEEECCS------SCH
T ss_pred cchHHHHHHHHHHHHhcC--CCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccC-CCcEEEeCC------CCH
Confidence 357788999999999999 99999999999999999999999999999999998764211 345788877 788
Q ss_pred HHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhc
Q 007849 122 EAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRL 186 (587)
Q Consensus 122 ~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g 186 (587)
++|..+|+|+|+|++.+...+ ...+|.+|.+++++.+++.|.++.
T Consensus 99 ~~f~~lL~fiYtg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 99 MVMREILDYIFSGQIRLNEDT--------------------IQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp HHHHHHHHHHTTSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHh
Confidence 899999999999999776443 489999999999999999998764
No 113
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.77 E-value=1.8e-18 Score=153.90 Aligned_cols=113 Identities=19% Similarity=0.294 Sum_probs=101.3
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccC-CcccCCCccCH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPM-SELLPYGKVGY 121 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l-~~~~~~~~v~~ 121 (587)
.+...+.+.|.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.+++.+ ....|.+ ++ +++
T Consensus 11 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e----~~~~i~l~~~------~~~ 78 (127)
T 1r29_A 11 RHASDVLLNLNRLRSRD--ILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR----NLSVINLDPE------INP 78 (127)
T ss_dssp THHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT----TCSEEECCTT------SCH
T ss_pred hHHHHHHHHHHHHHhcC--CCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC----CCCEEEeCCC------CCH
Confidence 47788999999999999 99999999999999999999999999999999998876 4567888 55 788
Q ss_pred HHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhcc
Q 007849 122 EAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLL 187 (587)
Q Consensus 122 ~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~ 187 (587)
++|..+|+|+|+|++.+...+ ...+|.+|..+++..+++.|.++..
T Consensus 79 ~~f~~ll~~~Ytg~~~~~~~~--------------------~~~ll~~A~~~~i~~L~~~c~~~l~ 124 (127)
T 1r29_A 79 EGFNILLDFMYTSRLNLREGN--------------------IMAVMATAMYLQMEHVVDTCRKFIK 124 (127)
T ss_dssp HHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 899999999999999876443 4899999999999999999988754
No 114
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=3.8e-18 Score=186.75 Aligned_cols=102 Identities=23% Similarity=0.245 Sum_probs=86.0
Q ss_pred CCCCCcHHHHHHH---cCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHH
Q 007849 265 REKRIKRIHKALD---SDDVELVRLLLSES-EIT---LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHI 337 (587)
Q Consensus 265 d~~g~TpLh~A~~---~g~~eiv~~LL~~g-~in---~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~ 337 (587)
+..|.||||+|+. .|+.++|++||++| ++| ..|+||||+||.+|+.++++.||..| ||+|.+|..|+||||+
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~ 246 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDI 246 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHH
Confidence 7899999999976 99999999999999 654 78999999999999999999999986 9999999999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Q 007849 338 GAMRKEPSVIVSLLTKGACASDLTLDGRSAVSICRR 373 (587)
Q Consensus 338 Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A~~ 373 (587)
|+..|+.+++++|+++||+++. ||+|.+..
T Consensus 247 A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 247 ARKKHHKECEELLEQAQAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHTTCHHHHHHHHHTCC------------------
T ss_pred HHHcCCHHHHHHHHHhCCCCCC------Ccceeecc
Confidence 9999999999999999999987 57776654
No 115
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.76 E-value=2.1e-18 Score=151.82 Aligned_cols=113 Identities=23% Similarity=0.327 Sum_probs=96.4
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+.+.+.+.+.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.++|.+. ....+.+++ ++++
T Consensus 7 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~---~~~~i~l~~------~~~~ 75 (120)
T 2if5_A 7 DHSSDILSGLNEQRTQG--LLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVD---QQNVYEIDF------VSAE 75 (120)
T ss_dssp THHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC--------CCSEEECCS------SCHH
T ss_pred chHHHHHHHHHHHHhcC--CCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCcccc---CCceEEeCC------CCHH
Confidence 46788999999999999 999999999999999999999999999999999988763 345778876 7888
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhc
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRL 186 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g 186 (587)
+|..+|+|+|+|++.+... ....+|.+|.+++++.+++.|.++.
T Consensus 76 ~f~~ll~~~Yt~~~~~~~~--------------------~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 76 ALTALMDFAYTATLTVSTA--------------------NVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHHHHHHHHHSCCCCCGG--------------------GHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCccCHH--------------------HHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 9999999999999876533 3589999999999999999998753
No 116
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=2.7e-18 Score=180.44 Aligned_cols=143 Identities=17% Similarity=0.175 Sum_probs=104.3
Q ss_pred CCChhHHHHHHHh-CcHHHHHhhhhhhhcCCCCcccccCCCcHHHHHHHHHHHhccCCCCCCCCcCCCcCC--CCCCcHH
Q 007849 196 EDIIPILLAAFHC-QLSQLLAQCVDRIVRSDLDTISIEKELPTEVAEEIRMLRLKSFPDDENTAVEVDPLR--EKRIKRI 272 (587)
Q Consensus 196 ~ng~t~Lh~A~~~-g~~~Ll~~~~~~~~~~~~d~~~~~~~lpl~ia~~I~~ll~~~~~~~~~~~~~in~~d--~~g~TpL 272 (587)
..+.++||.|+.. +...++...++ .++++|..+ ..|.|||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~-------------------------------------~Gadvn~~~~~~~g~TpL 239 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALA-------------------------------------HGADVNWVNGGQDNATPL 239 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHH-------------------------------------TTCCTTCCCTTTTCCCHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHH-------------------------------------cCCCCCccccccCCCCHH
Confidence 3456899999988 77555333222 345577777 8899999
Q ss_pred HHHHHcCCHHHHHHHHhCC-CCC---CCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHH
Q 007849 273 HKALDSDDVELVRLLLSES-EIT---LDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIV 348 (587)
Q Consensus 273 h~A~~~g~~eiv~~LL~~g-~in---~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~ 348 (587)
|+|+..|+.++|++|+++| ++| ..|+||||+|+..|+.+++++||..| +++|.+|.+|+||||+|+..|+.++++
T Consensus 240 h~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~ 318 (368)
T 3jue_A 240 IQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVT 318 (368)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 9999999999999999999 654 88999999999999999999999986 999999999999999999999999999
Q ss_pred HHHHCC---CCCCCCCCCCCcHHHHHHHcCC
Q 007849 349 SLLTKG---ACASDLTLDGRSAVSICRRLTR 376 (587)
Q Consensus 349 ~LL~~G---advn~~d~~G~TpL~~A~~~g~ 376 (587)
+|+..| ++....+..+.|+++++.....
T Consensus 319 lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 319 LLRLAKMREAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHHHHHC------------------------
T ss_pred HHHHcCCCcccccccCCCCCCHHHHHHHHHh
Confidence 999765 5555667788999999887643
No 117
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=2.4e-18 Score=148.62 Aligned_cols=91 Identities=23% Similarity=0.187 Sum_probs=80.0
Q ss_pred CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q 007849 292 EITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEPSVIVSLLTKGACASDLTLDGRSAVSIC 371 (587)
Q Consensus 292 ~in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpL~~A 371 (587)
++|.+|.||||+|+..|+.+++++|+..+ +++|.+|..|+||||+||..|+.+++++|+++|++++.+|..|+||||+|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 35688889999999999999999888875 99999999999999999999999999999999999999999999999999
Q ss_pred HHcCCchhHHHH
Q 007849 372 RRLTRPKDYQAK 383 (587)
Q Consensus 372 ~~~g~~~~v~~l 383 (587)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 999998888775
No 118
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=4.1e-20 Score=183.17 Aligned_cols=124 Identities=18% Similarity=0.113 Sum_probs=113.6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCC-CCCCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHHHHHHHcCCH
Q 007849 266 EKRIKRIHKALDSDDVELVRLLLSES-EITLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVLHIGAMRKEP 344 (587)
Q Consensus 266 ~~g~TpLh~A~~~g~~eiv~~LL~~g-~in~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpLh~Aa~~g~~ 344 (587)
..+.++++.++..|+.+.+..+...+ +++..|.||||+|+..|+.++++.||. |+++|.+|..|+||||+||..|+.
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~ 90 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSD 90 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCH
T ss_pred CCCccHHHHHHHcCCCcccccccccccccccCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCH
Confidence 45667777888888888777777766 677899999999999999999999998 599999999999999999999999
Q ss_pred HHHHHHHHCCCCCCCCC-CCCCcHHHHHHHcCCchhHHHHHhcCCCcc
Q 007849 345 SVIVSLLTKGACASDLT-LDGRSAVSICRRLTRPKDYQAKTEQGKETN 391 (587)
Q Consensus 345 ~iv~~LL~~Gadvn~~d-~~G~TpL~~A~~~g~~~~v~~l~~~G~~~~ 391 (587)
++|++||++|+++|.++ ..|+||||+|+..|+.+++++|++.|++++
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 138 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 138 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999999 789999999999999999999999999875
No 119
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.75 E-value=3.8e-19 Score=161.77 Aligned_cols=135 Identities=26% Similarity=0.382 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHH
Q 007849 46 NKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFL 125 (587)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~ 125 (587)
..+.+++.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.+++.+. ....+.+++ +++++|.
T Consensus 10 ~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~---~~~~i~l~~------~~~~~~~ 78 (145)
T 4eoz_A 10 CRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEIND------VEPEVFK 78 (145)
T ss_dssp CCHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHH---HHTEEEECS------SCHHHHH
T ss_pred HHHHHHHHHHHhCC--CCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCC---CCceEEecC------CCHHHHH
Confidence 35778999999999 999999999999999999999999999999999887652 234777776 7888999
Q ss_pred HHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHH
Q 007849 126 IFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAA 205 (587)
Q Consensus 126 ~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A 205 (587)
.+|+|+|+|++.+.. +....+|.+|.+++++.+.+.|.++...... .+|+...+.+|
T Consensus 79 ~~l~~~Y~~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~---~~n~~~~l~~A 135 (145)
T 4eoz_A 79 EMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILA 135 (145)
T ss_dssp HHHHHHHHSCCTTGG--------------------GTHHHHHHHHHHTTCHHHHHHHHCC--------------------
T ss_pred HHHHhhccCccCCcH--------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---HHHHHHHHHHH
Confidence 999999999987543 3348899999999999999999998877666 68899999999
Q ss_pred HHhCcHHHH
Q 007849 206 FHCQLSQLL 214 (587)
Q Consensus 206 ~~~g~~~Ll 214 (587)
..++...|.
T Consensus 136 ~~~~~~~Lk 144 (145)
T 4eoz_A 136 DLHSADQLK 144 (145)
T ss_dssp ---------
T ss_pred HHhCHHHhc
Confidence 999887663
No 120
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.75 E-value=2.7e-18 Score=176.63 Aligned_cols=150 Identities=27% Similarity=0.376 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHH
Q 007849 46 NKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFL 125 (587)
Q Consensus 46 ~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~ 125 (587)
..|.++|..++.++ .+|||+|.|+|+.|+|||+|||+||+||++||.+++.+. ....|.+++ +.+++|.
T Consensus 159 ~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~---~~~~i~l~~------~~~~~f~ 227 (312)
T 3hqi_A 159 CRLADELGGLWENS--RFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEES---KKNRVEIND------VEPEVFK 227 (312)
T ss_dssp CCHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC--------CCSEEEECS------SCHHHHH
T ss_pred chHHHHHHHHHhCC--CCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCcccc---CCceEEecC------CCHHHHH
Confidence 46789999999999 999999999999999999999999999999999988773 345788877 7778999
Q ss_pred HHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccccccccccCCChhHHHHH
Q 007849 126 IFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVGKAVAEDIIPILLAA 205 (587)
Q Consensus 126 ~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~~~~~~ng~t~Lh~A 205 (587)
.+|+|+|+|.+.+.. +....+|.+|.+++++.+...|.++...... .+++...|.+|
T Consensus 228 ~~L~~iYt~~~~~~~--------------------~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~---~~n~~~~l~~A 284 (312)
T 3hqi_A 228 EMMCFIYTGKAPNLD--------------------KMADDLLAAADKYALERLKVMCEDALCSNLS---VENAAEILILA 284 (312)
T ss_dssp HHHHHHHHSCCTTHH--------------------HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC---TTTHHHHHHHH
T ss_pred HHHHhhcCCCCCChH--------------------HHHHHHHHHHHHhCHHHHHHHHHHHHHccCC---HHHHHHHHHHH
Confidence 999999999876532 3458999999999999999999999887656 68899999999
Q ss_pred HHhCcHHHHHhhhhhhhcCCCCcc
Q 007849 206 FHCQLSQLLAQCVDRIVRSDLDTI 229 (587)
Q Consensus 206 ~~~g~~~Ll~~~~~~~~~~~~d~~ 229 (587)
..++...|.+.|.+++..+...+.
T Consensus 285 ~~~~~~~L~~~~~~~i~~~~~~v~ 308 (312)
T 3hqi_A 285 DLHSADQLKTQAVDFINYHATDVL 308 (312)
T ss_dssp HHTTCHHHHHHHHHHHHHTC----
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998765543
No 121
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.75 E-value=3.9e-18 Score=149.93 Aligned_cols=111 Identities=23% Similarity=0.278 Sum_probs=97.7
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+...+.+.|.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.+++ ...+.+++ ++++
T Consensus 6 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~-------~~~i~l~~------~~~~ 70 (119)
T 3b84_A 6 QHSVRVLQELNKQREKG--QYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS-------GGSVVLPA------GFAE 70 (119)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT-------CCCEEECG------GGHH
T ss_pred hHHHHHHHHHHHHHhcC--CCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC-------CCeEEeCC------CCHH
Confidence 46788999999999999 999999999999999999999999999999999864 24677776 7788
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccc
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLN 188 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~d 188 (587)
+|..+|+|+|+|++.+...+ ...+|.+|..++++.+.+.|.++...
T Consensus 71 ~f~~ll~~iYtg~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 71 IFGLLLDFFYTGHLALTSGN--------------------RDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred HHHHHHHHHcCCCCccCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999999999876544 48999999999999999999987654
No 122
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.74 E-value=9e-18 Score=169.83 Aligned_cols=96 Identities=22% Similarity=0.223 Sum_probs=89.2
Q ss_pred CCcCCCCCCcHHHHHHHc---CCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCh
Q 007849 261 VDPLREKRIKRIHKALDS---DDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYT 333 (587)
Q Consensus 261 in~~d~~g~TpLh~A~~~---g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~T 333 (587)
++..+..|.||||+|+.. |+.++|++|+++| ++ |..|+||||+|+..|+.++++.||..| +|+|.+|..|+|
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~t 240 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGK-ASIEIANESGET 240 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCC
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCC
Confidence 555688999999999999 8999999999999 65 478999999999999999999999876 999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC
Q 007849 334 VLHIGAMRKEPSVIVSLLTKGACA 357 (587)
Q Consensus 334 pLh~Aa~~g~~~iv~~LL~~Gadv 357 (587)
|||+|+..|+.+++++|+++|++.
T Consensus 241 pL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 241 PLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999853
No 123
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.74 E-value=4e-18 Score=153.36 Aligned_cols=113 Identities=21% Similarity=0.256 Sum_probs=96.5
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+...+.+.|.+++.++ .||||+|.|+|+.|+|||+||++||+||++||.+++ ...|.+++ +.++
T Consensus 7 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~-------~~~i~l~~------~~~~ 71 (135)
T 2yy9_A 7 GHSVRVLQELNKQREKG--QYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT-------GGSVVLPA------GFAE 71 (135)
T ss_dssp CHHHHHHHHHHHHHHTT--TTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-----------CCEEECG------GGHH
T ss_pred cHHHHHHHHHHHHHhcC--CCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC-------CCeEEeCC------CCHH
Confidence 47788999999999999 999999999999999999999999999999999865 23677776 7778
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccccc
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFV 190 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~ 190 (587)
+|..+|+|+|+|++.+...+ ..++|.+|.++++..+++.|.++..+..
T Consensus 72 ~f~~lL~fiYtg~~~i~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~~l~~~l 119 (135)
T 2yy9_A 72 IFGLLLDFFYTGHLALTSGN--------------------RDQVLLAAKELRVPEAVELCQSFQPQTS 119 (135)
T ss_dssp HHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHCCC---
T ss_pred HHHHHHHHHhCCCCCCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 99999999999999876544 4899999999999999999999876643
No 124
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.74 E-value=8.2e-18 Score=151.89 Aligned_cols=117 Identities=18% Similarity=0.193 Sum_probs=102.1
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+...+.+.|.+++.++ .+|||+|.|+|+.|+|||+||++||+||++||.+++.+ ...+.+++ .+.++
T Consensus 18 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~-----~v~~~ 85 (138)
T 2z8h_A 18 VHSTNVLLSLNDQRKKD--VLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTDA-----ELTVTLPE-----EVTVK 85 (138)
T ss_dssp SHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCCT-----TEEEECCT-----TSCHH
T ss_pred chHHHHHHHHHHHHhhC--CCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCCC-----CceEEeCC-----CCCHH
Confidence 57788999999999999 99999999999999999999999999999999988764 23566641 38888
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhcccccc
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVG 191 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~ 191 (587)
+|..+|+|+|+|++.+...+ ...+|.+|..+++..+++.|.++......
T Consensus 86 ~~~~lL~~~Ytg~~~i~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 86 GFEPLIQFAYTAKLILSKDN--------------------VDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp HHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred HHHHHHHHhcCCCcccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 99999999999999876544 48999999999999999999998776544
No 125
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.74 E-value=8.1e-18 Score=147.17 Aligned_cols=110 Identities=18% Similarity=0.303 Sum_probs=96.2
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCC--cccCCCccC
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMS--ELLPYGKVG 120 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~--~~~~~~~v~ 120 (587)
.+...+.++|.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.++ ....+.++ + ++
T Consensus 4 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~-------~~~~i~l~~~~------~~ 68 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAG--FLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST-------SENNVFLDQSQ------VK 68 (116)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC-------CCSCEECCTTT------CC
T ss_pred hHHHHHHHHHHHHHhcC--CCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC-------CCCeEEeecCC------CC
Confidence 46788999999999999 99999999999999999999999999999999875 22345555 5 78
Q ss_pred HHHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhcc
Q 007849 121 YEAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLL 187 (587)
Q Consensus 121 ~~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~ 187 (587)
+++|..+|+|+|+|++.+...+ ...+|.+|.+++++.+++.|.++..
T Consensus 69 ~~~f~~ll~~~Yt~~~~~~~~~--------------------v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 69 ADGFQKLLEFIYTGTLNLDSWN--------------------VKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCcccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 8899999999999999876443 4899999999999999999988753
No 126
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.73 E-value=9.7e-18 Score=147.40 Aligned_cols=108 Identities=18% Similarity=0.282 Sum_probs=96.2
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+.+.+.+.|.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.++ ...+.+++ ++++
T Consensus 9 ~h~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~--------~~~i~l~~------~~~~ 72 (119)
T 2q81_A 9 QHSQHVLEQLNQQRQLG--LLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ--------KDVVHLDI------SNAA 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC--------CSGGGGGG------CCHH
T ss_pred hHHHHHHHHHHHHHhcC--CCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC--------CCEEEeCC------CCHH
Confidence 57788999999999999 99999999999999999999999999999999872 24566655 7888
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhc
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRL 186 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g 186 (587)
+|..+|+|+|+|++.+...+ ..++|.+|.+++++.+++.|.++.
T Consensus 73 ~f~~ll~~~Ytg~~~i~~~~--------------------~~~ll~~A~~l~i~~L~~~C~~~l 116 (119)
T 2q81_A 73 GLGQVLEFMYTAKLSLSPEN--------------------VDDVLAVATFLQMQDIITACHALK 116 (119)
T ss_dssp HHHHHHHHHHHSCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999876544 489999999999999999998764
No 127
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.72 E-value=9.8e-18 Score=147.84 Aligned_cols=110 Identities=25% Similarity=0.359 Sum_probs=96.8
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+...+.+.|.+++.++ .+|||+|.++|+.|+|||+||++||+||++||.++ ...+.+++ ++++
T Consensus 10 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~--------~~~i~l~~------~~~~ 73 (121)
T 1buo_A 10 SHPTGLLCKANQMRLAG--TLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN--------SQHYTLDF------LSPK 73 (121)
T ss_dssp THHHHHHHHHHHHHHHT--TTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC--------CSEEEECS------SCHH
T ss_pred chHHHHHHHHHHHHhcC--CCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC--------CcEEEeCC------CCHH
Confidence 46788999999999999 99999999999999999999999999999999863 34677766 7888
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccc
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLN 188 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~d 188 (587)
+|..+|+|+|+|++.+... ....+|.+|..++++.+.+.|.++...
T Consensus 74 ~f~~ll~~~Ytg~~~~~~~--------------------~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 74 TFQQILEYAYTATLQAKAE--------------------DLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHHHHHHHHHSCCCCCGG--------------------GHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcCCCHH--------------------HHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 9999999999999877543 358999999999999999999887543
No 128
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.71 E-value=3.3e-18 Score=151.74 Aligned_cols=111 Identities=19% Similarity=0.254 Sum_probs=95.2
Q ss_pred hccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCH
Q 007849 42 VFSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGY 121 (587)
Q Consensus 42 ~~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~ 121 (587)
..+...+.+.|.+++.++ .||||+|.|+|+.|+|||+||++||+||++||.+.+.+ ...+.+++ .+++
T Consensus 13 ~~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-----~~~i~l~~-----~~~~ 80 (125)
T 3ohu_A 13 TVHCTNILLGLNDQRKKD--ILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-----DLVVSLPE-----EVTA 80 (125)
T ss_dssp SSHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-----SCEEECCT-----TCCH
T ss_pred HHHHHHHHHHHHHHHhcC--CccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-----CcEEEeCC-----CCCH
Confidence 357888999999999999 99999999999999999999999999999999987664 34566654 2778
Q ss_pred HHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHH
Q 007849 122 EAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQR 184 (587)
Q Consensus 122 ~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~ 184 (587)
++|..+|+|+|+|++.+...+ ...+|.+|..+++..+++.|.+
T Consensus 81 ~~f~~~l~~iYtg~~~~~~~~--------------------v~~ll~~A~~l~i~~L~~~C~~ 123 (125)
T 3ohu_A 81 RGFGPLLQFAYTAKLLLSREN--------------------IREVIRCAEFLRMHNLEDSCFS 123 (125)
T ss_dssp HHHHHHHHHHTTSEEEECTTT--------------------HHHHHHHHHHHTBSSCTTSSCC
T ss_pred HHHHHHHHhHcCCceEECHHH--------------------HHHHHHHHHHhCCHHHHHHHHH
Confidence 899999999999999876544 4889999999999888776654
No 129
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.70 E-value=2.4e-17 Score=142.36 Aligned_cols=101 Identities=26% Similarity=0.413 Sum_probs=84.3
Q ss_pred HHhCCCCCccceEEEEcC----eeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHH
Q 007849 55 LLIDSTCEYSDAEIIVEG----IPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSY 130 (587)
Q Consensus 55 l~~~~~~~~sDv~i~v~g----~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~y 130 (587)
+++++ .+|||+|.|++ +.|+|||+||++||+||++||.++|.++ ...+.+++ +++++|..+|+|
T Consensus 2 l~~~~--~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~----~~~i~l~~------~~~~~f~~~l~~ 69 (109)
T 2vkp_A 2 MFNNE--LMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEV----KSEIHIPD------VEPAAFLILLKY 69 (109)
T ss_dssp CTTCC--TTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC----------CCEEEETT------SCHHHHHHHHHH
T ss_pred cccCC--CcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccC----CCeEEeCC------CCHHHHHHHHHH
Confidence 56778 99999999998 8999999999999999999999998873 36777777 788899999999
Q ss_pred hcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhcc
Q 007849 131 TYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLL 187 (587)
Q Consensus 131 lYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~ 187 (587)
+|+|++.+...+ ...+|.+|.+++++.+.+.|.++..
T Consensus 70 iYt~~~~~~~~~--------------------~~~ll~~A~~~~~~~L~~~c~~~l~ 106 (109)
T 2vkp_A 70 MYSDEIDLEADT--------------------VLATLYAAKKYIVPALAKACVNFLE 106 (109)
T ss_dssp HHHCCCCCCTTT--------------------HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCCccCCHHH--------------------HHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 999999876544 4889999999999999999988754
No 130
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.69 E-value=6.3e-18 Score=149.73 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=94.5
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+...+.+.|.+++.++ .+|||+|.|+|+.|+|||+||++||+||++||.+++.+ ...+.+++ .++++
T Consensus 11 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e-----~~~i~l~~-----~v~~~ 78 (124)
T 2ihc_A 11 VHSTNVLLSLNDQRKKD--VLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG-----ELNITLPE-----EVTVK 78 (124)
T ss_dssp SHHHHHHHHHHHHHHHT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC--------CEEEECCT-----TSCHH
T ss_pred chHHHHHHHHHHHHhcC--CCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC-----CceEeecC-----CcCHH
Confidence 46778999999999999 99999999999999999999999999999999998765 24566631 38888
Q ss_pred HHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhc
Q 007849 123 AFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRL 186 (587)
Q Consensus 123 af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g 186 (587)
+|..+|+|+|+|++.+...+ ..++|.+|..++++.+++.|.++.
T Consensus 79 ~f~~lL~~iYtg~~~i~~~~--------------------v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 79 GFEPLIQFAYTAKLILSKEN--------------------VDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp HHHHHHHHHHHSEEEEETTT--------------------HHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred HHHHHHHHhcCCCcccCHHH--------------------HHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99999999999998775443 489999999999999988887653
No 131
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.68 E-value=1.7e-17 Score=147.99 Aligned_cols=111 Identities=23% Similarity=0.390 Sum_probs=93.1
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCC-cccCCCccCH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMS-ELLPYGKVGY 121 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~-~~~~~~~v~~ 121 (587)
.+...+.+.|.+++.++ .+|||+|.|+|+.|+|||+||++||+||++||.+. ....+.++ + +++
T Consensus 15 ~~~~~l~~~l~~l~~~~--~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~-------~~~~i~l~~~------~~~ 79 (129)
T 3ga1_A 15 NFGNSILECLNEQRLQG--LYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS-------RSAVVELPAA------VQP 79 (129)
T ss_dssp THHHHHHHHHHHHHHTT--CSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC-------CCSEEECCTT------CCH
T ss_pred cHHHHHHHHHHHHHhcC--CCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC-------CCCEEEECCC------CCH
Confidence 56788999999999999 99999999999999999999999999999999986 23577775 5 888
Q ss_pred HHHHHHHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccc
Q 007849 122 EAFLIFLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLN 188 (587)
Q Consensus 122 ~af~~lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~d 188 (587)
++|..+|+|+|+|++.+...+ ...+|.+|..+++..+++.|.++...
T Consensus 80 ~~f~~ll~~iYtg~~~i~~~~--------------------~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 80 QSFQQILSFCYTGRLSMNVGD--------------------QDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HHHHHHHHHHHHSEEECCTTT--------------------HHHHHHHHHHTTBTTSSCC-------
T ss_pred HHHHHHHHHHhCCccccCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 899999999999999876544 48899999999999999988877654
No 132
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=1.2e-16 Score=137.85 Aligned_cols=90 Identities=21% Similarity=0.264 Sum_probs=80.2
Q ss_pred CCCcCCCCCCcHHHHHHHcCCHHHHHHHHhCC-CC---CCCCchHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCChHH
Q 007849 260 EVDPLREKRIKRIHKALDSDDVELVRLLLSES-EI---TLDEANALHYAAAYCDPKVLSEVLSLGLADVNLRSSRGYTVL 335 (587)
Q Consensus 260 ~in~~d~~g~TpLh~A~~~g~~eiv~~LL~~g-~i---n~~g~tpLh~Aa~~g~~~~v~~LL~~~gadvn~~d~~G~TpL 335 (587)
..+..+.+|.||||+|+..|+.+++++|++.| ++ |..|+||||+|+..|+.+++++||..+ +++|.+|..|+|||
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl 94 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAF 94 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHH
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHH
Confidence 35556889999999999999999999999999 55 488999999999999999999999885 99999999999999
Q ss_pred HHHHHcCCHHHHHHH
Q 007849 336 HIGAMRKEPSVIVSL 350 (587)
Q Consensus 336 h~Aa~~g~~~iv~~L 350 (587)
|+|+..|+.+++++|
T Consensus 95 ~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 95 DISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999987
No 133
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.66 E-value=1.4e-16 Score=139.39 Aligned_cols=102 Identities=24% Similarity=0.326 Sum_probs=88.7
Q ss_pred ccHHHHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHH
Q 007849 43 FSLNKLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYE 122 (587)
Q Consensus 43 ~~~~~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~ 122 (587)
.+...+.+.|.+++.++ .||||+|.++|+.|+|||+||++||+||++||.++ ...+.+++ ++++
T Consensus 13 ~~~~~l~~~l~~~~~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~--------~~~i~l~~------~~~~ 76 (116)
T 3fkc_A 13 QYSGSLLNSLNEQRGHG--LFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA--------GQVVELSF------IRAE 76 (116)
T ss_dssp THHHHHHHHHHHHHHHT--TTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC--------CSEEEECS------SCHH
T ss_pred cHHHHHHHHHHHHHhcC--CceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC--------CCEEEeCC------CCHH
Confidence 46788999999999999 99999999999999999999999999999999874 34677766 7888
Q ss_pred HHHHHHHHhcCCCc-CCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHH
Q 007849 123 AFLIFLSYTYSGKL-KPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVS 180 (587)
Q Consensus 123 af~~lL~ylYtg~l-~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~ 180 (587)
+|..+|+|+|+|++ .+.. +....+|.+|..++++.+.+
T Consensus 77 ~f~~~l~~~Ytg~~~~~~~--------------------~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 77 IFAEILNYIYSSKIVRVRS--------------------DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHHTTSCCCSCCH--------------------HHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHhhcCCCcCCCCH--------------------HHHHHHHHHHHHhCccccCc
Confidence 99999999999998 4432 34588999999999988764
No 134
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.58 E-value=1e-15 Score=134.34 Aligned_cols=100 Identities=16% Similarity=0.112 Sum_probs=81.8
Q ss_pred HHHHHHHHHHhCCCCCccceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHHH
Q 007849 47 KLSSSLEQLLIDSTCEYSDAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFLI 126 (587)
Q Consensus 47 ~l~~~l~~l~~~~~~~~sDv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~ 126 (587)
.+.+.|. +.++ .||||+|.|+|+.|+|||+|||++|+||++ ....+.+++ |++++|..
T Consensus 18 ~~l~~l~--r~~~--~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~------------~~~~i~l~~------v~~~~f~~ 75 (119)
T 3m5b_A 18 RLVQLAA--RLRP--ALCDTLITVGSQEFPAHSLVLAGVSQQLGR------------RGQWALGEG------ISPSTFAQ 75 (119)
T ss_dssp HHHHHHH--HHTT--TTCCEEEEETTEEEEECHHHHHTTCGGGCC------------CEEEECCSS------CCHHHHHH
T ss_pred HHHHHHH--HhcC--CCcceEEEECCEEEeeEHHHHHHcCHHHhc------------CCCEEEeCC------CCHHHHHH
Confidence 3444443 4567 999999999999999999999999999984 123566666 88889999
Q ss_pred HHHHhcCCCcCCCCCcccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccc
Q 007849 127 FLSYTYSGKLKPFPMEVSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLN 188 (587)
Q Consensus 127 lL~ylYtg~l~~~~~~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~d 188 (587)
+|+|+|||++.+...+ ...+|.+|..+++..+++.|.+...+
T Consensus 76 ll~fiYtg~~~i~~~~--------------------v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 76 LLNFVYGESVELQPGE--------------------LRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HHHHHTTCCEEECGGG--------------------HHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHcCCCcCcCHHH--------------------HHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 9999999999875433 48999999999999999999987543
No 135
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=98.35 E-value=6.4e-07 Score=82.16 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=75.6
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhh-ccC-CCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCc
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKR-EKG-SVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPME 142 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~-~~~-e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~ 142 (587)
|+++. +|+.|.+||.+ |+.|+||++||.+ ++. +. ....|.+++ |+..++..+++|+|+++-...+..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~---~~~~Ipl~~------V~~~iL~kViey~~~h~~~~~~~~ 72 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEG---DDDPVPLPN------VNAAILKKVIQWCTHHKDDPPPPE 72 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS---------CEECTT------SCHHHHHHHHHHHHHTTTCCC---
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccc---cCCCcCCCC------ccHHHHHHHHHHHHHcCcCCCCcc
Confidence 56654 69999999999 8999999999987 544 31 223566666 888899999999999875432211
Q ss_pred cccc----ccccccCC---CCchhhhhHHHHHHHHHHcChHHHHHHHHHhcccccc
Q 007849 143 VSTC----VDNICVHD---ACRPAINFAVEMMYASSIFELPELVSLFQRRLLNFVG 191 (587)
Q Consensus 143 v~~c----v~~l~~~~---a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~ 191 (587)
...+ .+.+..-. -.+ ..+...++|.+|.++++..++.+|.+..++...
T Consensus 73 ~~~~~~~~~~~i~~wD~~F~~i-d~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 73 DDENKEKRTDDIPVWDQEFLKV-DQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp --------CCCCCHHHHHHTCS-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred cccccccchhhhhHHHHHHHcC-CHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 0000 00000000 000 124458999999999999999999998877544
No 136
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=97.94 E-value=1.5e-05 Score=66.55 Aligned_cols=57 Identities=14% Similarity=0.103 Sum_probs=42.4
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhh--ccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhc
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKR--EKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTY 132 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~--~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylY 132 (587)
|+++. +|+.|.+||.+ |+.|+||++||.+ .+.|. ....|.+++ |+..++..+++|+|
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~---~~~~I~l~~------V~~~iL~kViey~~ 63 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN---ETNEVNFRE------IPSHVLSKVCMYFT 63 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC-----------CEEECTT------SCHHHHHHHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCcccc---CCCceECCC------CCHHHHHHHHHHHH
Confidence 34444 58999999999 9999999999986 44431 234677766 88889999999999
No 137
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=97.59 E-value=0.00013 Score=65.13 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=72.7
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCccc
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPMEVS 144 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~v~ 144 (587)
+++.. +|+.|.+||.+ |..|.+|+.||...- ...|.+++ |+..++..+++|+|..+-...+....
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~-------~~~Ipl~~------V~~~iL~kVieyc~~h~~~~~~~~~~ 69 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG-------MDPVPLPN------VNAAILKKVIQWCTHHKDDPPPPEDD 69 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC-------CSSEECTT------CCHHHHHHHHHHHHHHTTCC------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC-------CCceecCC------cCHHHHHHHHHHHHHhccCCCccccc
Confidence 55665 58999999998 889999999998631 12455555 88889999999999876433211100
Q ss_pred ccccccccCCCCch---------hhhhHHHHHHHHHHcChHHHHHHHHHhcccccc
Q 007849 145 TCVDNICVHDACRP---------AINFAVEMMYASSIFELPELVSLFQRRLLNFVG 191 (587)
Q Consensus 145 ~cv~~l~~~~a~~~---------~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~ 191 (587)
.+.. ......+ ..+...+++.+|.++++..++.++.+..++...
T Consensus 70 ~~~~---~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 70 ENKE---KRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp --------------HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred cccc---cchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 0000 0000000 114458899999999999999999998877544
No 138
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=97.14 E-value=0.00014 Score=66.56 Aligned_cols=113 Identities=13% Similarity=0.155 Sum_probs=46.9
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCccc
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPMEVS 144 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~v~ 144 (587)
|++.. +|..|.+||.+ |..|++|+.||..... ...|.+++ |+..++..+++|+|+.+-...+....
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~~------~~~Ipl~~------V~~~iL~kVieyc~~h~~~~~~~~~~ 72 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDCV------DNGVPLPN------VTSKILAKVIEYCKRHVEAAASKAEA 72 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC------------------CCTT------SCHHHHHHHHHC--------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccCC------CCceeCCc------CcHHHHHHHHHHHHHcccCCCccccc
Confidence 45553 59999999998 8899999999976421 12455555 88889999999999987543111100
Q ss_pred -----ccccccccCCCC-ch-hhhhHHHHHHHHHHcChHHHHHHHHHhcccccc
Q 007849 145 -----TCVDNICVHDAC-RP-AINFAVEMMYASSIFELPELVSLFQRRLLNFVG 191 (587)
Q Consensus 145 -----~cv~~l~~~~a~-~~-~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~ 191 (587)
...+.+..-.+. .. ..+.+.++|.+|.++++..|+.++.+..++...
T Consensus 73 ~~~~~~~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 73 VEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIK 126 (160)
T ss_dssp ----------------------------CHHHHHHTTCHHHHHHHHHHHHHTTT
T ss_pred ccccccccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 000000000000 00 113347888889999999999998888777543
No 139
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=96.43 E-value=0.01 Score=50.10 Aligned_cols=96 Identities=19% Similarity=0.281 Sum_probs=68.1
Q ss_pred ceEEEEcCeeEEeeeeehhhcc-HHHHHHHhhccCCC-CCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCc
Q 007849 65 DAEIIVEGIPVCVHRCILAARS-KFFYELFKREKGSV-DKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPME 142 (587)
Q Consensus 65 Dv~i~v~g~~~~~Hr~ILaarS-~~F~~lf~~~~~e~-~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~ 142 (587)
-|+|.|+|..|...+..|.... .+|..||.+.+.-. ..+....+-+ | -.+..|..+|.|+.+|++..+. +
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-D------Rdp~~F~~IL~~lr~g~l~~p~-~ 78 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-D------RDPTYFGPVLNYLRHGKLVINK-D 78 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-C------SCHHHHHHHHHHHHHSCCCCCT-T
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-c------CChHHHHHHHHHhCCCeeCCCC-C
Confidence 4789999999999999998764 47888887642110 0001112222 3 5677999999999999987643 2
Q ss_pred ccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhc
Q 007849 143 VSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRL 186 (587)
Q Consensus 143 v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g 186 (587)
+ .....+.-|..|++.+++++|.+..
T Consensus 79 ~------------------~~~~l~~Ea~fy~l~~L~~~l~~~i 104 (107)
T 3drz_A 79 L------------------AEEGVLEEAEFYNITSLIKLVKDKI 104 (107)
T ss_dssp S------------------CHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred C------------------CHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 1 1256788999999999999997653
No 140
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=94.22 E-value=0.067 Score=44.02 Aligned_cols=89 Identities=15% Similarity=0.129 Sum_probs=55.6
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhhc-c-CCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCC-CC
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKRE-K-GSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPF-PM 141 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~~-~-~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~-~~ 141 (587)
+++.. +|..|.++|.+ |..|.+++.|+... . .+. ....|.+++ |+..++..+++|+|..+-... ..
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~---~~~~Ipl~~------V~~~iL~kVieyc~~h~~~~~~~~ 72 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAEN---ETNEVNFRE------IPSHVLSKVCMYFTYKVRYTNSST 72 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC-----------CEEECSS------CCHHHHHHHHHHHHHHHHHHSCCS
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccc---cCCceeCCC------CCHHHHHHHHHHHHHccccCCCcc
Confidence 44554 59999999996 88999999999852 1 221 123566665 888899999999987542211 11
Q ss_pred cccccccccccCCCCchhhhhHHHHHHHHHHcC
Q 007849 142 EVSTCVDNICVHDACRPAINFAVEMMYASSIFE 174 (587)
Q Consensus 142 ~v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g 174 (587)
+.. ++ .+ ..+...+++.+|..++
T Consensus 73 ~i~---~w------~v-d~~~l~eLi~AAnyLd 95 (96)
T 2fnj_C 73 EIP---EF------PI-APEIALELLMAANFLD 95 (96)
T ss_dssp CCC---CC------CC-CTTTHHHHHHHHHHHT
T ss_pred cCC---Cc------cc-CHHHHHHHHHHHHHhC
Confidence 110 01 00 1144588888887765
No 141
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=93.82 E-value=0.1 Score=43.22 Aligned_cols=59 Identities=8% Similarity=0.053 Sum_probs=46.1
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCC
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGK 135 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~ 135 (587)
+++.. +|..|.++|.+ |..|.+++.|+..++ +. ....|.+++ |+..++..+++|+|..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~---~~~~Iplp~------V~~~iL~kVieyc~~h~ 65 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RE---SKGRIELKQ------FDSHILEKAVEYLNYNL 65 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TT---CTTEEEETT------SCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-cc---CCCceecCC------cCHHHHHHHHHHHHHhc
Confidence 55665 59999999996 889999999998754 21 223566666 88889999999999754
No 142
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=93.36 E-value=0.35 Score=44.08 Aligned_cols=115 Identities=15% Similarity=0.186 Sum_probs=71.6
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhhccCCCC-CCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCcc
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKREKGSVD-KEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPMEV 143 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~~-~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~v 143 (587)
++++. +|..|.+++.+ |..|.+++.|+.....+.. ......|.+++ |+..++..|++|++..+-...+...
T Consensus 9 i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~Iplpn------V~s~iL~kVieyc~~h~~~~~~~~~ 81 (169)
T 3v7d_A 9 VVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPN------VRSSVLQKVIEWAEHHRDSNFPDED 81 (169)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTT------CCHHHHHHHHHHHHHTTTCCCCC--
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCC------CCHHHHHHHHHHHHHcccCCCcccc
Confidence 44544 38999999997 7789999999975322100 00113566655 8888999999999987654322100
Q ss_pred cccccccccCCCCch---------hhhhHHHHHHHHHHcChHHHHHHHHHhcccccc
Q 007849 144 STCVDNICVHDACRP---------AINFAVEMMYASSIFELPELVSLFQRRLLNFVG 191 (587)
Q Consensus 144 ~~cv~~l~~~~a~~~---------~id~~~tlL~~A~~~g~~elv~lLl~~g~di~~ 191 (587)
..- -.....++ ..+.+.+++.+|.++++..|+.++.+..++...
T Consensus 82 ~~~----~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 82 DDD----SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIR 134 (169)
T ss_dssp ----------CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ccc----ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHc
Confidence 000 00000111 124458999999999999999999988777443
No 143
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=92.26 E-value=0.32 Score=45.44 Aligned_cols=98 Identities=19% Similarity=0.252 Sum_probs=66.8
Q ss_pred ceEEEEcCeeEEeeeeehhhcc-HHHHHHHhhccCCC-CCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCc
Q 007849 65 DAEIIVEGIPVCVHRCILAARS-KFFYELFKREKGSV-DKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPME 142 (587)
Q Consensus 65 Dv~i~v~g~~~~~Hr~ILaarS-~~F~~lf~~~~~e~-~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~ 142 (587)
=|+|.|+|..|..-+..|...- .+|..||.+.+.-. ..+....+-+ |-.|. .|..||.|+-+|++..+..-
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~------~F~~ILnyLRtG~L~lP~~~ 85 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPT------YFGPVLNYLRHGKLVINKDL 85 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCST------THHHHHHHHHHSCCCCCTTS
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChH------HHHHHHHHhcCCccCCCCCC
Confidence 4678999999999999998653 37888886542110 0001122222 33344 99999999999998764321
Q ss_pred ccccccccccCCCCchhhhhHHHHHHHHHHcChHHHHHHHHHhccc
Q 007849 143 VSTCVDNICVHDACRPAINFAVEMMYASSIFELPELVSLFQRRLLN 188 (587)
Q Consensus 143 v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv~lLl~~g~d 188 (587)
....++.-|..|++.+++++|.+....
T Consensus 86 -------------------~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 86 -------------------AEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp -------------------CHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -------------------CHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 114578889999999999998776543
No 144
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=68.90 E-value=5 Score=33.62 Aligned_cols=60 Identities=13% Similarity=0.061 Sum_probs=42.3
Q ss_pred eEEEE-cCeeEEeeeeehhhccHHHHHHHhhc--cCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCC
Q 007849 66 AEIIV-EGIPVCVHRCILAARSKFFYELFKRE--KGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGK 135 (587)
Q Consensus 66 v~i~v-~g~~~~~Hr~ILaarS~~F~~lf~~~--~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~ 135 (587)
++++. +|..|.+.+. .|..|..++.|+... +.+. ....|.+++ |+..++..+++|++..+
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~---~~~~Iplpn------V~s~iL~kVieyc~~h~ 81 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAEN---ETNEVNFRE------IPSHVLSKVCMYFTYKV 81 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC-----------CEEECSS------CCHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccc---cCCceeCCC------CCHHHHHHHHHHHHHhh
Confidence 55553 5999999999 578899999999742 1220 113555555 88889999999998654
No 145
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=56.26 E-value=15 Score=29.91 Aligned_cols=86 Identities=19% Similarity=0.117 Sum_probs=51.6
Q ss_pred eEEEEcCeeEEeeeeehhhcc-HHHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcC-CCcCCCCCcc
Q 007849 66 AEIIVEGIPVCVHRCILAARS-KFFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYS-GKLKPFPMEV 143 (587)
Q Consensus 66 v~i~v~g~~~~~Hr~ILaarS-~~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYt-g~l~~~~~~v 143 (587)
|+|.|+|..|...+..|...- ..+-.|+.....- +....++-+ |-.| ..|..+|.|+-+ |++..+. ++
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~--~~~~~eyFi-DRdp------~~F~~ILnflR~~G~l~~p~-~~ 72 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYY--DPLRNEYFF-DRNR------PSFDAILYFYQSGGRLRRPV-NV 72 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGE--ETTTTEEEE-CSCS------TTHHHHHHHHHTTSCCCCCT-TS
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhcccccc--CCCceeEEE-cCCh------HHHHHHHHHHhcCCcccCCC-CC
Confidence 689999999999999885431 1223333221000 001122222 3334 499999999999 8886543 21
Q ss_pred cccccccccCCCCchhhhhHHHHHHHHHHcChHHHH
Q 007849 144 STCVDNICVHDACRPAINFAVEMMYASSIFELPELV 179 (587)
Q Consensus 144 ~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~elv 179 (587)
.....+.-|..+++.+.+
T Consensus 73 ------------------~~~~~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 73 ------------------PLDVFSEEIKFYELGENA 90 (100)
T ss_dssp ------------------CHHHHHHHHHHTTCCHHH
T ss_pred ------------------CHHHHHHHHHHcCCCHHH
Confidence 125577788888887644
No 146
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.71 E-value=7.9 Score=31.75 Aligned_cols=51 Identities=12% Similarity=0.073 Sum_probs=40.0
Q ss_pred cCCChhHHHHHHHhCcHHHHHhhhhhhhcCCCCccccc--CCCcHHHHHHHHH
Q 007849 195 AEDIIPILLAAFHCQLSQLLAQCVDRIVRSDLDTISIE--KELPTEVAEEIRM 245 (587)
Q Consensus 195 ~~ng~t~Lh~A~~~g~~~Ll~~~~~~~~~~~~d~~~~~--~~lpl~ia~~I~~ 245 (587)
..||..++.+|..++...|.+.|.+++.+++..+...+ ..+|.+.+..++.
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~ 62 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIIS 62 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHc
Confidence 78999999999999999999999999999887765443 4456555444443
No 147
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=50.20 E-value=7.1 Score=32.86 Aligned_cols=66 Identities=20% Similarity=0.098 Sum_probs=40.6
Q ss_pred ceEEEEcCeeEEeeeeehhhccH-HHHHHHhhccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCC
Q 007849 65 DAEIIVEGIPVCVHRCILAARSK-FFYELFKREKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPF 139 (587)
Q Consensus 65 Dv~i~v~g~~~~~Hr~ILaarS~-~F~~lf~~~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~ 139 (587)
=|+|.|+|..|..-+..|...-. ++..||.+...- +....++-+ | -.+..|..+|.|+-+|++..+
T Consensus 6 ~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~--~~~~g~~Fi-D------Rdp~~F~~ILnylR~G~l~~p 72 (115)
T 3kvt_A 6 RVIINVGGIRHETYKATLKKIPATRLSRLTEGMLNY--DPVLNEYFF-D------RHPGVFAQIINYYRSGKLHYP 72 (115)
T ss_dssp EEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTE--ETTTTEEEE-C------SCTTTHHHHHHHHHHSCBCCC
T ss_pred EEEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCC--CCCCCcEEE-e------cChHHHHHHHHHhcCCCCCCC
Confidence 47899999999999998875422 333343321100 001112221 3 244599999999999998765
No 148
>4a1q_A ORF E73; viral protein, extremophIle, archaea, ribbon-helix-helix Pro DNA-binding proteins; NMR {Sulfolobus virus ragged hills} PDB: 4aai_A
Probab=46.03 E-value=3.6 Score=29.62 Aligned_cols=12 Identities=42% Similarity=0.858 Sum_probs=9.0
Q ss_pred HHHhhCCccCCC
Q 007849 499 KTVEMGQRYFPL 510 (587)
Q Consensus 499 ~~~~~~~~~~~~ 510 (587)
|.-|.||||||-
T Consensus 61 ki~ei~krffpa 72 (73)
T 4a1q_A 61 KIDEISKRFFPA 72 (73)
T ss_dssp HHHHHHHHHSCC
T ss_pred cHHHHHHhccCC
Confidence 344888999994
No 149
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=44.58 E-value=17 Score=30.98 Aligned_cols=84 Identities=15% Similarity=0.059 Sum_probs=51.2
Q ss_pred ceEEEEcCeeEEeeeeehhhccHHHHHHHhh--ccCCCCCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCc
Q 007849 65 DAEIIVEGIPVCVHRCILAARSKFFYELFKR--EKGSVDKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPME 142 (587)
Q Consensus 65 Dv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~--~~~e~~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~ 142 (587)
=|+|.|+|..|..-+..|...-. .+|.. .+.. -+.....+-+ +-.+..|..||.|+-+|++.... +
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~-~~~~~g~~Fi-------DRdp~~F~~ILnflR~G~l~~p~-~ 81 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFF-FNEDTKEYFF-------DRDPEVFRCVLNFYRTGKLHYPR-Y 81 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGT-BCSSSCSEEE-------CSCHHHHHHHHHHHHHSCBCCCT-T
T ss_pred EEEEEeCCEEEEEeHHHHhcCCC---ceecccCCccc-ccCCCCcEEE-------cCChHHHHHHHHHHhcCCCCCCC-C
Confidence 57899999999999988865321 22222 0000 0000111111 24778999999999999886542 2
Q ss_pred ccccccccccCCCCchhhhhHHHHHHHHHHcChHHH
Q 007849 143 VSTCVDNICVHDACRPAINFAVEMMYASSIFELPEL 178 (587)
Q Consensus 143 v~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~el 178 (587)
+ ....++.-|..||+..+
T Consensus 82 ~------------------~~~~l~~Ea~fy~i~~l 99 (124)
T 1s1g_A 82 E------------------CISAYDDELAFYGILPE 99 (124)
T ss_dssp S------------------CHHHHHHHHHHTTCCGG
T ss_pred c------------------CHHHHHHHHHHcCCChH
Confidence 1 12556777888888765
No 150
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=36.64 E-value=20 Score=31.16 Aligned_cols=85 Identities=15% Similarity=0.068 Sum_probs=50.5
Q ss_pred ceEEEEcCeeEEeeeeehhhccHHHHHHHhhccCCC-CCCCCCcccCCcccCCCccCHHHHHHHHHHhcCCCcCCCCCcc
Q 007849 65 DAEIIVEGIPVCVHRCILAARSKFFYELFKREKGSV-DKEGKPKYPMSELLPYGKVGYEAFLIFLSYTYSGKLKPFPMEV 143 (587)
Q Consensus 65 Dv~i~v~g~~~~~Hr~ILaarS~~F~~lf~~~~~e~-~~~~~~~i~l~~~~~~~~v~~~af~~lL~ylYtg~l~~~~~~v 143 (587)
-|+|.|+|..|..-+..|...- ..||....... -+....++-+ +-.+..|..||.|+-+|++.... ++
T Consensus 36 ~V~LNVGG~~F~T~~~TL~~~P---~S~L~~~~~~~~~~~~~g~yFi-------DRdp~~F~~ILnflR~G~l~~p~-~~ 104 (140)
T 2nz0_B 36 LIVLNVSGRRFQTWRTTLERYP---DTLLGSTEKEFFFNEDTKEYFF-------DRDPEVFRCVLNFYRTGKLHYPR-YE 104 (140)
T ss_dssp EEEEEETTEEEEEEHHHHHTCT---TSTTTSGGGGGSEETTTTEEEE-------CSCHHHHHHHHHHHHHSSBCCCT-TS
T ss_pred EEEEEECCEEEEeeHHHHhcCC---CeeecccCCcccccCCCCeEEE-------eCCcHHHHHHHHHHhcCCcCCCC-Cc
Confidence 6889999999999998886532 12232200000 0001111211 24678999999999999887542 21
Q ss_pred cccccccccCCCCchhhhhHHHHHHHHHHcChHHH
Q 007849 144 STCVDNICVHDACRPAINFAVEMMYASSIFELPEL 178 (587)
Q Consensus 144 ~~cv~~l~~~~a~~~~id~~~tlL~~A~~~g~~el 178 (587)
....++.-|..||+..+
T Consensus 105 ------------------~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 105 ------------------CISAYDDELAFYGILPE 121 (140)
T ss_dssp ------------------CHHHHHHHHHHHTCCGG
T ss_pred ------------------CHHHHHHHHHHcCCChH
Confidence 12556667777777654
No 151
>3gna_A RAG-1, V(D)J recombination-activating protein 1; DNA recombination, DNA-binding, endonucle hydrolase; 2.40A {Mus musculus} PDB: 3gnb_A
Probab=26.76 E-value=42 Score=25.74 Aligned_cols=25 Identities=40% Similarity=0.507 Sum_probs=19.4
Q ss_pred HHHHHhhhHHhHHHHHHHhchhHhhhh
Q 007849 537 QRVKRMRFIELKDDVQKAFTRDKAEIS 563 (587)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (587)
|+..|-|..|||-.| |+|.+ |||-.
T Consensus 33 rraqkhrlrelk~qv-k~Fad-kEegG 57 (96)
T 3gna_A 33 RRAQKHRLRELKIQV-KEFAD-KEEGG 57 (96)
T ss_dssp HHHHHHHHHHHHHHH-HHHHH-HHSTT
T ss_pred HHHHHHHHHHHHHHH-HHHHh-HhhCC
Confidence 566689999999887 78976 77653
No 152
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=21.44 E-value=62 Score=21.32 Aligned_cols=18 Identities=33% Similarity=0.366 Sum_probs=14.4
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 007849 271 RIHKALDSDDVELVRLLL 288 (587)
Q Consensus 271 pLh~A~~~g~~eiv~~LL 288 (587)
-+..||..|+++.++.|-
T Consensus 16 qiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHH
Confidence 367788999999888874
Done!