Your job contains 1 sequence.
>007852
MAENNLTTTTSPPKALQSPNPMPDPSSTSSSSSSSTTALVSTQTPATTSFSPSLDSQQQQ
QQQIPQLVQQQQQNNVNANVMSNYQIPHTLQRSPSISRLNQIHQPQQQQNSQYSNVLRQQ
AIYGQVNFGQQNQQQSSNQQLGSPTLSRSGLIGQTGHLPGMLSGQASAAAAQFNLQSPLM
ASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMGILNLSSHLRANPLYAQQRMNQGQIRQQL
SQQNPLTSPQIQNLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAPG
SPSFRLQQHQRQSPVLLQQQLASSPQLQNSMGLNQQQLSQLVQQQPQMGHAQLHQPQPQP
QPQQQQQLQQQQSQQQPSLHQQQQQQQSPRISGPAGQKSLSLTGSQPDATVSGTTTPGGS
SSQGTEATNQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHR
KSSTLESKDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIRALMEPSQSET
ITNDPREMIRQGLGNPVGVNTHMKSSASSEQLLMPSGSQMLQQLTRY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007852
(587 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2018861 - symbol:EER4 "ENHANCED ETHYLENE RESPO... 592 1.3e-115 2
TAIR|locus:2100053 - symbol:TAF12 "TBP-associated factor ... 328 4.9e-34 2
UNIPROTKB|Q3T174 - symbol:TAF12 "Transcription initiation... 301 9.4e-27 1
UNIPROTKB|E2QVZ3 - symbol:TAF12 "Uncharacterized protein"... 301 9.4e-27 1
UNIPROTKB|Q16514 - symbol:TAF12 "Transcription initiation... 301 9.4e-27 1
MGI|MGI:1913714 - symbol:Taf12 "TAF12 RNA polymerase II, ... 301 9.4e-27 1
RGD|1592841 - symbol:Taf12 "TAF12 RNA polymerase II, TATA... 301 9.4e-27 1
UNIPROTKB|Q5ZKX3 - symbol:TAF12 "Uncharacterized protein"... 299 1.5e-26 1
POMBASE|SPAC15A10.02 - symbol:taf12 "transcription factor... 295 4.6e-26 2
ZFIN|ZDB-GENE-031030-5 - symbol:taf12 "TAF12 RNA polymera... 293 6.6e-26 1
UNIPROTKB|G3MXQ4 - symbol:G3MXQ4 "Uncharacterized protein... 286 4.4e-25 1
UNIPROTKB|I3LKU2 - symbol:TAF12 "Uncharacterized protein"... 266 9.6e-23 1
CGD|CAL0005789 - symbol:orf19.470 species:5476 "Candida a... 246 3.4e-20 4
DICTYBASE|DDB_G0274697 - symbol:taf12 "TFIID subunit" spe... 249 2.5e-19 3
SGD|S000002552 - symbol:TAF12 "Subunit (61/68 kDa) of TFI... 256 2.5e-19 1
FB|FBgn0011290 - symbol:Taf12 "TBP-associated factor 12" ... 209 1.3e-18 2
UNIPROTKB|J9NXV6 - symbol:J9NXV6 "Uncharacterized protein... 225 3.9e-18 1
ASPGD|ASPL0000036544 - symbol:AN2769 species:162425 "Emer... 181 1.4e-11 2
UNIPROTKB|D4A8J1 - symbol:D4A8J1 "Uncharacterized protein... 163 2.4e-11 1
UNIPROTKB|G4NDQ9 - symbol:MGG_00885 "Uncharacterized prot... 168 7.1e-09 2
WB|WBGene00006396 - symbol:taf-12 species:6239 "Caenorhab... 134 4.8e-08 2
>TAIR|locus:2018861 [details] [associations]
symbol:EER4 "ENHANCED ETHYLENE RESPONSE 4" species:3702
"Arabidopsis thaliana" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA;ISS] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA;ISS] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009867 "jasmonic
acid mediated signaling pathway" evidence=IMP] [GO:0010104
"regulation of ethylene mediated signaling pathway" evidence=IMP]
[GO:0000394 "RNA splicing, via endonucleolytic cleavage and
ligation" evidence=RCA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=RCA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 EMBL:CP002684
GO:GO:0005634 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0009736 GO:GO:0003743 GO:GO:0009867 GO:GO:0005669
GO:GO:0010104 KO:K03126 HSSP:Q16514 EMBL:AY056144 EMBL:AY091423
EMBL:AY463614 IPI:IPI00528864 RefSeq:NP_564023.1 RefSeq:NP_849680.1
UniGene:At.22899 UniGene:At.41836 ProteinModelPortal:Q940A7
SMR:Q940A7 IntAct:Q940A7 STRING:Q940A7 PRIDE:Q940A7
EnsemblPlants:AT1G17440.1 EnsemblPlants:AT1G17440.2 GeneID:838316
KEGG:ath:AT1G17440 TAIR:At1g17440 HOGENOM:HOG000238463
InParanoid:Q940A7 OMA:SLAFMNP PhylomeDB:Q940A7
ProtClustDB:CLSN2687840 ArrayExpress:Q940A7 Genevestigator:Q940A7
Uniprot:Q940A7
Length = 683
Score = 592 (213.5 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 122/199 (61%), Positives = 149/199 (74%)
Query: 390 RISGPAGQKSLSLTGSQPDATVXXXXXXXXXXXXXXEATNQLLGKRKIQDLVSQVDSQGK 449
R+ AGQKS+SLTGSQP+AT EATNQLLGKRKIQDLVSQVD K
Sbjct: 486 RMLSHAGQKSVSLTGSQPEATQSGTTTPGGSSSQGTEATNQLLGKRKIQDLVSQVDVHAK 545
Query: 450 VDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDILLHLEKNWHLTVPGFSSEE 509
+DP+VEDLLLE+ADDFIDSVTSFAC+LAKHRKSS LE KDILLHLEKN HLT+PGFSSE+
Sbjct: 546 LDPDVEDLLLEVADDFIDSVTSFACSLAKHRKSSVLEPKDILLHLEKNLHLTIPGFSSED 605
Query: 510 RNHQRKSLSSDVHSKRLEMIRALMEPSQSETITNDPREMIRQGLGNPVGVNTHMKSSASS 569
+ Q K++ +D+H KRL M+RAL+E S+ ET ++ +E +RQ + NP G N ++ S SS
Sbjct: 606 KR-QTKTVPTDLHKKRLAMVRALLESSKPETNASNSKETMRQAMVNPNGPNHLLRPSQSS 664
Query: 570 EQLL-MPSGSQMLQQLTRY 587
EQL+ SG +LQ +TRY
Sbjct: 665 EQLVSQTSGPHILQHMTRY 683
Score = 568 (205.0 bits), Expect = 1.3e-115, Sum P(2) = 1.3e-115
Identities = 148/318 (46%), Positives = 180/318 (56%)
Query: 8 TTTSPPKALQ--SPNPMPDPXXXXXXXXXXXXALVSTQT-PATTS-FSPSLDSXXXXXXX 63
T+++PP Q SP+P+ P + TQ P + S
Sbjct: 82 TSSNPPIGAQIPSPSPLSHPSSSLDQQTQTQQLVQQTQQLPQQQQQIMQQISSSPIPQLS 141
Query: 64 XXXXXXXXXXNNVNANV-MSNYQIPHTLQRSPSISRLNXXXXXXXXXXXX-YSNVLRQQA 121
+ + + MS+YQI +LQRSPS+SRL+ Y NVLRQQA
Sbjct: 142 PQQQQILQQQHMTSQQIPMSSYQIAQSLQRSPSLSRLSQIQQQQQQQHQGQYGNVLRQQA 201
Query: 122 -IYXXXXXXXXXXXXXXXXXXXX--PTLSRSGLIGQTGHLPGMLSGQASAAAAQFNLQSP 178
+Y P +SR+GL+GQ+GHLP ML+G +A AAQ N+Q
Sbjct: 202 GLYGTMNFGGSGSVQQSQQNQQMVNPNMSRAGLVGQSGHLP-MLNG--AAGAAQMNIQPQ 258
Query: 179 LMA-SPRQKPGVVPGSQFHPGNSPGQSLPGMQAMGI---LNLSSHLRANP-LYAXXXXXX 233
L+A SPRQK G+V GSQFHPG+S GQ L GMQAMG+ LNL+S +R NP LYA
Sbjct: 259 LLAASPRQKSGMVQGSQFHPGSS-GQQLQGMQAMGMMGSLNLTSQMRGNPALYAQQRINP 317
Query: 234 XXXXXXLSQQNPLTSPQIQNLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQM 293
LSQQN LTSPQ+QNL RTSS LAFMNPQLSGLAQNGQ GMMQNSLSQQQWLKQM
Sbjct: 318 GQMRQQLSQQNALTSPQVQNLQRTSS-LAFMNPQLSGLAQNGQAGMMQNSLSQQQWLKQM 376
Query: 294 PAMSAPGSPSFRLQQHQR 311
+++P S FRLQ QR
Sbjct: 377 SGITSPNS--FRLQPSQR 392
Score = 67 (28.6 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 242 QQNPLTSPQIQ--NLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAP 299
QQ L+SPQ+ ++S ++ + Q +Q GQ M Q S SQQQ L+QM
Sbjct: 403 QQQQLSSPQLHQSSMSLNQQQISQIIQQQQQQSQLGQSQMNQ-SHSQQQ-LQQMQ-QQLQ 459
Query: 300 GSPSFRLQQHQR 311
P ++QQ Q+
Sbjct: 460 QQPQQQMQQQQQ 471
Score = 67 (28.6 bits), Expect = 1.5e-68, Sum P(3) = 1.5e-68
Identities = 26/97 (26%), Positives = 36/97 (37%)
Query: 1 MAENNLTTTTSPPKALQSPNPM-PDPXXXXXXXXXXXXALVSTQTPATTSFSPSLDSXXX 59
MAE + +++ PK+LQSPNPM P P Q T S S++S
Sbjct: 1 MAEP-IPSSSLSPKSLQSPNPMEPSPASSTPLPSSSS----QQQQLMTAPISNSVNSAAS 55
Query: 60 XXXXXXXXXXXXXXNNVNANVMSNYQIPHTLQRSPSI 96
NN N+ S P+ +P I
Sbjct: 56 PAMTVTTTEGIVIQNNSQPNISS----PNPTSSNPPI 88
Score = 66 (28.3 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 45/166 (27%), Positives = 65/166 (39%)
Query: 150 GLIGQTGHLPGMLSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGN--SPGQSLPG 207
G++ Q P + S +++ Q P SP P Q Q LP
Sbjct: 65 GIVIQNNSQPNISSPNPTSSNPPIGAQIP-SPSPLSHPSSSLDQQTQTQQLVQQTQQLPQ 123
Query: 208 MQAMGILNLSSHLRANPLYAXXXXXXXXXXXXLSQQNPLTSPQI-QNLSRTSSSLAFMNP 266
Q + +SS P + SQQ P++S QI Q+L R S SL+ ++
Sbjct: 124 QQQQIMQQISSS--PIPQLSPQQQQILQQQHMTSQQIPMSSYQIAQSLQR-SPSLSRLS- 179
Query: 267 QLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAPGSPSFRL-QQHQR 311
Q+ Q G N L QQ L M+ GS S + QQ+Q+
Sbjct: 180 QIQQQQQQQHQGQYGNVLRQQAGL--YGTMNFGGSGSVQQSQQNQQ 223
Score = 63 (27.2 bits), Expect = 4.0e-68, Sum P(3) = 4.0e-68
Identities = 43/163 (26%), Positives = 63/163 (38%)
Query: 148 RSGLI-GQTGHLPG----MLSG-QASAAAAQFNLQSPLMASP------RQKPGVVPG--S 193
+SG++ G H PG L G QA NL S + +P R PG + S
Sbjct: 267 KSGMVQGSQFH-PGSSGQQLQGMQAMGMMGSLNLTSQMRGNPALYAQQRINPGQMRQQLS 325
Query: 194 QFHPGNSPG-QSLPGMQAMGILNLS-SHLRANPLYAXXXXXXXXXXXXLSQQNPLTSPQI 251
Q + SP Q+L ++ +N S L N A L Q + +TSP
Sbjct: 326 QQNALTSPQVQNLQRTSSLAFMNPQLSGLAQNG-QAGMMQNSLSQQQWLKQMSGITSPNS 384
Query: 252 QNLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLS-QQQWLKQM 293
L + + Q Q P + Q+S+S QQ + Q+
Sbjct: 385 FRLQPSQRQALLLQQQQQQQQQLSSPQLHQSSMSLNQQQISQI 427
Score = 45 (20.9 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 533 MEPSQSETITNDPREMIRQGLGNPVGVNTHMKSSASSEQLLMPSGSQMLQQ 583
++PSQ + + ++ +Q L +P H S + ++Q + SQ++QQ
Sbjct: 387 LQPSQRQALLLQQQQQQQQQLSSP---QLHQSSMSLNQQQI----SQIIQQ 430
Score = 44 (20.5 bits), Expect = 3.9e-66, Sum P(3) = 3.9e-66
Identities = 23/68 (33%), Positives = 28/68 (41%)
Query: 242 QQNPLTSPQIQNLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAPGS 301
QQ+ L Q+ N S + L M QL Q Q M Q QQQ +QM S
Sbjct: 433 QQSQLGQSQM-NQSHSQQQLQQMQQQLQ---QQPQQQMQQ----QQQQQQQMQINQQQPS 484
Query: 302 PSFRLQQH 309
P R+ H
Sbjct: 485 P--RMLSH 490
>TAIR|locus:2100053 [details] [associations]
symbol:TAF12 "TBP-associated factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AC010927 GO:GO:0005669 UniGene:At.23399 UniGene:At.39997
eggNOG:COG5624 KO:K03126 HSSP:Q16514 EMBL:AF344878 EMBL:AY463613
EMBL:AK221690 IPI:IPI00544681 RefSeq:NP_566367.1 UniGene:At.75030
ProteinModelPortal:Q9SR71 SMR:Q9SR71 IntAct:Q9SR71 STRING:Q9SR71
PaxDb:Q9SR71 PRIDE:Q9SR71 EnsemblPlants:AT3G10070.1 GeneID:820168
KEGG:ath:AT3G10070 TAIR:At3g10070 HOGENOM:HOG000153525
InParanoid:Q9SR71 OMA:ESITTFG PhylomeDB:Q9SR71
ProtClustDB:CLSN2716425 ArrayExpress:Q9SR71 Genevestigator:Q9SR71
Uniprot:Q9SR71
Length = 539
Score = 328 (120.5 bits), Expect = 4.9e-34, Sum P(2) = 4.9e-34
Identities = 65/155 (41%), Positives = 98/155 (63%)
Query: 390 RISGPAGQKSLS-LTGSQPDATVXXXXXXXXXXXXXXEATNQLLGKRKIQDLVSQVDSQG 448
R+ G QK S + SQP + +++LGKR I +L+ Q+D
Sbjct: 358 RVQGLVNQKVTSPVMPSQPPVA-QPGNHAKTVSAETEPSDDRILGKRSIHELLQQIDPSE 416
Query: 449 KVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDILLHLEKNWHLTVPGFSSE 508
K+DPEVED+L +IA+DF++S+T+F C+LAKHRKS LE+KDILLH+E+NW++ PGFSS+
Sbjct: 417 KLDPEVEDILSDIAEDFVESITTFGCSLAKHRKSDILEAKDILLHVERNWNIRPPGFSSD 476
Query: 509 ERNHQRKSLSSDVHSKRLEMIRALMEPSQSETITN 543
E RK L++D+H +RL I+ + +++ N
Sbjct: 477 EFKTFRKPLTTDIHKERLAAIKKSVTATEAANARN 511
Score = 66 (28.3 bits), Expect = 4.9e-34, Sum P(2) = 4.9e-34
Identities = 47/178 (26%), Positives = 68/178 (38%)
Query: 147 SRSGLIGQTGHLPGMLS-GQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSL 205
S S G G G L G + A N SP + + G+ G G S Q
Sbjct: 159 SPSAFPGSFGQQYGGLGRGTVGMSEATSNTSSPQVRMMQGTQGI--GMMGTLG-SGSQIR 215
Query: 206 P-GMQAMGILNLSSHLR-ANPLYAXXXXXXXXXXXXLSQQNPLTSPQIQNLSRTSSSLAF 263
P GM S LR A+ L + +P++SP +Q+ + SL
Sbjct: 216 PSGMTQHQQRPTQSSLRPASSTSTQSPVAQNFQGHSLMRPSPISSPNVQSTGASQQSLQA 275
Query: 264 MN-PQLSGLAQNGQPGM-------MQNSLSQQQ--WLKQMPAMSAPGSPSFRLQQHQR 311
+N P LS Q G+P + NS S QQ + Q ++ +P + QQ Q+
Sbjct: 276 INQPWLSSTPQ-GKPPLPPPSYRPQVNSPSMQQRPHIPQQHISTSAATPQPQQQQSQQ 332
Score = 42 (19.8 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 157 HLPGMLSGQASAAAAQFNLQSPLMASPRQKPGV---VPGSQF-HPGNSPGQSLP 206
H S S+++A + S L S +Q+ G+ VP S P +P Q P
Sbjct: 107 HFSSASSPLLSSSSAPASSSSSLPISGQQRGGMAIGVPASPIPSPSPTPSQHSP 160
Score = 40 (19.1 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 28/98 (28%), Positives = 33/98 (33%)
Query: 177 SPLMASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMGILNLSSHL-RANP-LYAXXXXXXX 234
SP SP P P P SP Q +LS L R P Y+
Sbjct: 51 SPAPQSPSLNPNPNPPQYTRPVTSPATQ----QQQ---HLSQPLVRPPPQAYSRPWQQHS 103
Query: 235 XXXXXLSQQNPLTSPQIQNLSRTSSSLAFMNPQLSGLA 272
S +PL S S +SSSL Q G+A
Sbjct: 104 SYTHFSSASSPLLSSSSAPAS-SSSSLPISGQQRGGMA 140
>UNIPROTKB|Q3T174 [details] [associations]
symbol:TAF12 "Transcription initiation factor TFIID subunit
12" species:9913 "Bos taurus" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
GO:GO:0006355 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 EMBL:BC102082 IPI:IPI00691548 IPI:IPI00826150
RefSeq:NP_001029926.1 UniGene:Bt.24273 ProteinModelPortal:Q3T174
SMR:Q3T174 STRING:Q3T174 PRIDE:Q3T174 Ensembl:ENSBTAT00000037998
GeneID:614227 KEGG:bta:614227 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 HOGENOM:HOG000035092
HOVERGEN:HBG055174 InParanoid:Q3T174 KO:K03126 OMA:KMPGTPS
OrthoDB:EOG4ZCT5X NextBio:20899006 Uniprot:Q3T174
Length = 161
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 54/102 (52%), Positives = 80/102 (78%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
NQ+L K+K+QDLV +VD ++D +VE++LL+IADDFI+SV + AC LA+HRKSSTLE K
Sbjct: 55 NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114
Query: 489 DILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
D+ LHLE+ W++ +PGF SEE +K+ +++ H +R+ +IR
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
>UNIPROTKB|E2QVZ3 [details] [associations]
symbol:TAF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 CTD:6883 GeneTree:ENSGT00390000002144 KO:K03126
OMA:KMPGTPS EMBL:AAEX03006463 RefSeq:XP_535337.2 UniGene:Cfa.10041
Ensembl:ENSCAFT00000018626 Ensembl:ENSCAFT00000037565 GeneID:609994
KEGG:cfa:609994 NextBio:20893961 Uniprot:E2QVZ3
Length = 161
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 54/102 (52%), Positives = 80/102 (78%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
NQ+L K+K+QDLV +VD ++D +VE++LL+IADDFI+SV + AC LA+HRKSSTLE K
Sbjct: 55 NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114
Query: 489 DILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
D+ LHLE+ W++ +PGF SEE +K+ +++ H +R+ +IR
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
>UNIPROTKB|Q16514 [details] [associations]
symbol:TAF12 "Transcription initiation factor TFIID subunit
12" species:9606 "Homo sapiens" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0030914 "STAGA
complex" evidence=IEA;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004402 "histone
acetyltransferase activity" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0000125
"PCAF complex" evidence=IDA] [GO:0043966 "histone H3 acetylation"
evidence=IDA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0033276
"transcription factor TFTC complex" evidence=IDA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] Reactome:REACT_71
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
Reactome:REACT_116125 GO:GO:0016032 GO:GO:0051091 GO:GO:0003677
EMBL:CH471059 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006368 GO:GO:0008134 GO:GO:0006367 Reactome:REACT_1788
GO:GO:0043966 GO:GO:0005669 GO:GO:0030914 GO:GO:0033276
GO:GO:0000125 EMBL:AL513497 CleanEx:HS_TAF15 CTD:6883
eggNOG:COG5624 HOGENOM:HOG000035092 HOVERGEN:HBG055174 KO:K03126
OMA:KMPGTPS OrthoDB:EOG4ZCT5X EMBL:U57693 EMBL:D50544 EMBL:X84002
EMBL:BT007031 EMBL:AY206865 EMBL:BC011986 IPI:IPI00002806
IPI:IPI00759817 PIR:JC4676 RefSeq:NP_001128690.1 RefSeq:NP_005635.1
UniGene:Hs.530251 PDB:1H3O PDBsum:1H3O ProteinModelPortal:Q16514
SMR:Q16514 DIP:DIP-496N IntAct:Q16514 MINT:MINT-3032603
STRING:Q16514 PhosphoSite:Q16514 DMDM:3024708 PaxDb:Q16514
PRIDE:Q16514 DNASU:6883 Ensembl:ENST00000263974
Ensembl:ENST00000373824 GeneID:6883 KEGG:hsa:6883 UCSC:uc001bqx.3
GeneCards:GC01M028915 HGNC:HGNC:11545 HPA:HPA008519 MIM:600773
neXtProt:NX_Q16514 PharmGKB:PA36320 InParanoid:Q16514
PhylomeDB:Q16514 EvolutionaryTrace:Q16514 GenomeRNAi:6883
NextBio:26891 Bgee:Q16514 CleanEx:HS_TAF12 Genevestigator:Q16514
GermOnline:ENSG00000120656 Uniprot:Q16514
Length = 161
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 54/102 (52%), Positives = 80/102 (78%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
NQ+L K+K+QDLV +VD ++D +VE++LL+IADDFI+SV + AC LA+HRKSSTLE K
Sbjct: 55 NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114
Query: 489 DILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
D+ LHLE+ W++ +PGF SEE +K+ +++ H +R+ +IR
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
>MGI|MGI:1913714 [details] [associations]
symbol:Taf12 "TAF12 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0000125 "PCAF complex" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0030914 "STAGA complex" evidence=ISO;IDA]
[GO:0033276 "transcription factor TFTC complex" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 MGI:MGI:1913714
GO:GO:0051091 GO:GO:0003677 GO:GO:0003700 GO:GO:0003713
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0043966
GO:GO:0004402 GO:GO:0005669 GO:GO:0030914 GO:GO:0033276
GO:GO:0000125 CTD:6883 eggNOG:COG5624 GeneTree:ENSGT00390000002144
HOVERGEN:HBG055174 KO:K03126 OrthoDB:EOG4ZCT5X EMBL:AK007811
EMBL:AK013133 EMBL:AK132927 EMBL:BC019668 IPI:IPI00311877
RefSeq:NP_079855.2 UniGene:Mm.331926 ProteinModelPortal:Q8VE65
SMR:Q8VE65 DIP:DIP-29178N STRING:Q8VE65 PhosphoSite:Q8VE65
PaxDb:Q8VE65 PRIDE:Q8VE65 Ensembl:ENSMUST00000030731 GeneID:66464
KEGG:mmu:66464 UCSC:uc008vax.2 InParanoid:Q8VE65 NextBio:321768
Bgee:Q8VE65 Genevestigator:Q8VE65 GermOnline:ENSMUSG00000028899
Uniprot:Q8VE65
Length = 161
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 54/102 (52%), Positives = 80/102 (78%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
NQ+L K+K+QDLV +VD ++D +VE++LL+IADDFI+SV + AC LA+HRKSSTLE K
Sbjct: 55 NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114
Query: 489 DILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
D+ LHLE+ W++ +PGF SEE +K+ +++ H +R+ +IR
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
>RGD|1592841 [details] [associations]
symbol:Taf12 "TAF12 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0000125 "PCAF complex" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005669 "transcription
factor TFIID complex" evidence=ISO] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=ISO] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0030914 "STAGA
complex" evidence=ISO] [GO:0033276 "transcription factor TFTC
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0004402 "histone acetyltransferase
activity" evidence=ISO] InterPro:IPR003228 InterPro:IPR009072
Pfam:PF03847 ProDom:PD012998 RGD:1592841 GO:GO:0006352
Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:CH473968 GO:GO:0005669
CTD:6883 HOVERGEN:HBG055174 KO:K03126 EMBL:BC158610 IPI:IPI00765148
RefSeq:NP_001108508.1 UniGene:Rn.7592 SMR:B0BMY3 GeneID:682902
KEGG:rno:682902 NextBio:723988 Genevestigator:B0BMY3 Uniprot:B0BMY3
Length = 161
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 54/102 (52%), Positives = 80/102 (78%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
NQ+L K+K+QDLV +VD ++D +VE++LL+IADDFI+SV + AC LA+HRKSSTLE K
Sbjct: 55 NQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 114
Query: 489 DILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
D+ LHLE+ W++ +PGF SEE +K+ +++ H +R+ +IR
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
>UNIPROTKB|Q5ZKX3 [details] [associations]
symbol:TAF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000125 "PCAF complex" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR003228 InterPro:IPR009072
Pfam:PF03847 ProDom:PD012998 GO:GO:0051091 GO:GO:0003677
GO:GO:0003700 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0006367 GO:GO:0043966 GO:GO:0004402 GO:GO:0005669
GO:GO:0030914 GO:GO:0033276 GO:GO:0000125 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 HOGENOM:HOG000035092
HOVERGEN:HBG055174 KO:K03126 OMA:KMPGTPS OrthoDB:EOG4ZCT5X
EMBL:AADN02043979 EMBL:AJ719961 IPI:IPI00599624
RefSeq:NP_001026065.1 UniGene:Gga.3980 SMR:Q5ZKX3 STRING:Q5ZKX3
Ensembl:ENSGALT00000001463 Ensembl:ENSGALT00000041133 GeneID:419585
KEGG:gga:419585 InParanoid:Q5ZKX3 NextBio:20822616 Uniprot:Q5ZKX3
Length = 161
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 53/103 (51%), Positives = 81/103 (78%)
Query: 428 TNQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLES 487
+NQ+L K+K+QDLV +VD ++D +VE++LL+IADDFI+SV + AC LA+HRKS+TLE
Sbjct: 54 SNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEV 113
Query: 488 KDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
KD+ LHLE+ W++ +PGF SEE +K+ +++ H +R+ +IR
Sbjct: 114 KDVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
>POMBASE|SPAC15A10.02 [details] [associations]
symbol:taf12 "transcription factor TFIID complex
subunit A/ SAGA complex subunit Taf12" species:4896
"Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005669 "transcription factor TFIID complex" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 PomBase:SPAC15A10.02 EMBL:CU329670 GO:GO:0006355
GenomeReviews:CU329670_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 eggNOG:COG5624 KO:K03126 HSSP:Q16514
PIR:T37702 RefSeq:NP_594289.1 ProteinModelPortal:O13722 SMR:O13722
STRING:O13722 EnsemblFungi:SPAC15A10.02.1 GeneID:2542785
KEGG:spo:SPAC15A10.02 OrthoDB:EOG45TGXB NextBio:20803829
Uniprot:O13722
Length = 450
Score = 295 (108.9 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 50/81 (61%), Positives = 72/81 (88%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
N+LL KRK+ DL+ Q+DS+ K++PEVE+LLLEIAD+F++SVT+FAC LAKHRKS TL+ +
Sbjct: 340 NRLLSKRKLHDLLQQIDSEEKIEPEVEELLLEIADEFVESVTNFACRLAKHRKSDTLDVR 399
Query: 489 DILLHLEKNWHLTVPGFSSEE 509
D+ LHLE+NW++ +PGF+S++
Sbjct: 400 DVQLHLERNWNIRLPGFASDD 420
Score = 45 (20.9 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 253 NLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLS 285
N+S S+ LA Q SGLA N + + +S
Sbjct: 256 NVSNESTELATSATQQSGLANNVEKSQTPSYMS 288
>ZFIN|ZDB-GENE-031030-5 [details] [associations]
symbol:taf12 "TAF12 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
ZFIN:ZDB-GENE-031030-5 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005669 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 HOGENOM:HOG000035092
HOVERGEN:HBG055174 KO:K03126 OMA:KMPGTPS OrthoDB:EOG4ZCT5X
EMBL:CR936200 EMBL:CR936484 EMBL:BC056696 EMBL:BC065878
EMBL:BC152198 IPI:IPI00489312 RefSeq:NP_938182.1
RefSeq:XP_003200277.1 UniGene:Dr.17679 SMR:Q6P013 STRING:Q6P013
Ensembl:ENSDART00000076222 Ensembl:ENSDART00000123639
Ensembl:ENSDART00000124208 GeneID:100535183 GeneID:386637
KEGG:dre:100535183 KEGG:dre:386637 InParanoid:Q6P013
NextBio:20813965 Uniprot:Q6P013
Length = 162
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 51/101 (50%), Positives = 79/101 (78%)
Query: 430 QLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKD 489
Q+L K+K+QDLV ++D ++D +VE++LL+IADDFI+SV + AC LA+HRKSSTLE KD
Sbjct: 57 QVLSKKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVKD 116
Query: 490 ILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
+ LHLE+ W++ +PGF S+E +K+ +++ H +R+ +IR
Sbjct: 117 VQLHLERQWNMWIPGFGSDEIRPYKKACTTEAHKQRMALIR 157
>UNIPROTKB|G3MXQ4 [details] [associations]
symbol:G3MXQ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 GeneTree:ENSGT00390000002144 EMBL:DAAA02038278
Ensembl:ENSBTAT00000037324 Uniprot:G3MXQ4
Length = 161
Score = 286 (105.7 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 55/112 (49%), Positives = 86/112 (76%)
Query: 428 TNQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLES 487
+NQ+L K+K+QDLV +VD ++D +VE++LL+IADDFI+SV + AC LA+HRKSSTLE
Sbjct: 54 SNQVLTKKKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEV 113
Query: 488 KDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIRALMEPSQSE 539
K++ LHLE+ W++ +PGFSSEE +K+ +++ H R++ + L+E Q++
Sbjct: 114 KNVQLHLERQWNMWIPGFSSEEIRPYKKACTTEAH--RIKKL--LIEKKQNK 161
>UNIPROTKB|I3LKU2 [details] [associations]
symbol:TAF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051091 "positive regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] [GO:0033276 "transcription
factor TFTC complex" evidence=IEA] [GO:0030914 "STAGA complex"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000125
"PCAF complex" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 GO:GO:0051091
GO:GO:0003677 GO:GO:0003700 GO:GO:0003713 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0006367 GO:GO:0043966 GO:GO:0004402
GO:GO:0005669 GO:GO:0030914 GO:GO:0033276 GO:GO:0000125
GeneTree:ENSGT00390000002144 OMA:KMPGTPS EMBL:FP565629
Ensembl:ENSSSCT00000027861 Uniprot:I3LKU2
Length = 161
Score = 266 (98.7 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 49/102 (48%), Positives = 74/102 (72%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
NQ+L K+K+QDLV +VD ++D +VE+L+ E+ F SV + AC LA+HRKSSTLE K
Sbjct: 55 NQVLTKKKLQDLVREVDPNEQLDEDVEELVNELMSFFCXSVVTAACQLARHRKSSTLEVK 114
Query: 489 DILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
D+ LHLE+ W++ +PGF SEE +K+ +++ H +R+ +IR
Sbjct: 115 DVQLHLERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIR 156
>CGD|CAL0005789 [details] [associations]
symbol:orf19.470 species:5476 "Candida albicans" [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0000124 "SAGA
complex" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 CGD:CAL0005789
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AACQ01000055
GO:GO:0005669 eggNOG:COG5624 KO:K03126 RefSeq:XP_717334.1
ProteinModelPortal:Q5A6T4 STRING:Q5A6T4 GeneID:3640954
KEGG:cal:CaO19.470 Uniprot:Q5A6T4
Length = 750
Score = 246 (91.7 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 45/105 (42%), Positives = 77/105 (73%)
Query: 428 TNQLLGKRKIQDLVSQV---DSQGK--VDPEVEDLLLEIADDFIDSVTSFACNLAKHRKS 482
+ ++L KRK+ DL++ + + GK +D VE+ LL++AD+FI SVTSFAC LAKHRK
Sbjct: 633 SGRVLNKRKLGDLINTIGVDEGDGKTSIDGNVEEFLLDLADEFIHSVTSFACRLAKHRKV 692
Query: 483 STLESKDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLE 527
++E++D+ LHL+KNW++ +PG++ +E + RK S+ +S++++
Sbjct: 693 DSIEARDVQLHLDKNWNIKIPGYAMDEIRNTRKIQPSNSYSQKVQ 737
Score = 51 (23.0 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 34/161 (21%), Positives = 62/161 (38%)
Query: 144 PTLSRSGLIGQTGHLPGMLSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQF-------- 195
PT +++G+ Q PG + Q + + + +P ++ P SQF
Sbjct: 428 PT-AQAGVASQAA-TPGFRASQPTPSQTSRTGSALQQRAPSRQASSTPQSQFQPPLPSES 485
Query: 196 -HPGNSPGQS-LPGMQAMGILNLSSHLRANPLYAXXXXXXXXXXXXLSQQNPLTS----- 248
HP + + LP G S + A P + + T+
Sbjct: 486 RHPSATTSEKPLPQQPGSGTAK-SPSVAATPAQNNGTVTARSASPVATTTDSATTGRSGT 544
Query: 249 PQIQNLSRTSSSLAFMNPQLSGLAQNGQPGM-MQNSLSQQQ 288
PQ Q+ SR+ SSL L+G+ + P + + +S++ +Q
Sbjct: 545 PQQQSRSRSGSSL-----NLAGITRQSVPSLPISSSINVKQ 580
Score = 51 (23.0 bits), Expect = 3.8e-20, Sum P(3) = 3.8e-20
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 74 NNVNANVMSNYQI--PHTLQRSPSI 96
NN N N MSN Q+ P Q+SP++
Sbjct: 128 NNENFNAMSNNQVGTPMMQQQSPNM 152
Score = 46 (21.3 bits), Expect = 5.4e-20, Sum P(4) = 5.4e-20
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 243 QNPLTSPQIQNLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQ 288
QN +Q+ +T +F +PQL + Q G Q QQQ
Sbjct: 351 QNQNQIQGVQSAGQTPQQQSF-SPQLQAVQQQQFMGNSQQQQQQQQ 395
Score = 45 (20.9 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 3 ENNLTTTTSPPKALQSP--NPMPDP 25
++ L T SPP+ Q+ NP P P
Sbjct: 173 QSPLMTQQSPPEQFQAQKSNPTPQP 197
Score = 40 (19.1 bits), Expect = 3.4e-20, Sum P(4) = 3.4e-20
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 43 QTPATTSFSPSLDS 56
QTP SFSP L +
Sbjct: 364 QTPQQQSFSPQLQA 377
Score = 37 (18.1 bits), Expect = 5.4e-20, Sum P(4) = 5.4e-20
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 146 LSRSGLIGQTGHLPGMLSG 164
+ + ++G G PG ++G
Sbjct: 212 IRNNAIVGTNGAAPGQING 230
>DICTYBASE|DDB_G0274697 [details] [associations]
symbol:taf12 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA;ISS] [GO:0016568 "chromatin modification"
evidence=ISS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
dictyBase:DDB_G0274697 GO:GO:0006355 GenomeReviews:CM000151_GR
GO:GO:0016568 EMBL:AAFI02000012 EMBL:AC123513 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367 GO:GO:0005669
eggNOG:COG5624 KO:K03126 RefSeq:XP_644047.2 HSSP:Q16514
ProteinModelPortal:Q555L9 SMR:Q555L9 STRING:Q555L9
EnsemblProtists:DDB0304680 GeneID:8619477 KEGG:ddi:DDB_G0274697
InParanoid:Q555L9 OMA:TNGINEA Uniprot:Q555L9
Length = 627
Score = 249 (92.7 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 56/153 (36%), Positives = 87/153 (56%)
Query: 430 QLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKD 489
++LGKRK+ +L+ Q+ K+D + ED+L +ADDF++S +FAC LAKHR S+TLE KD
Sbjct: 440 EVLGKRKLIELLQQISPNEKMDEDAEDILSVLADDFVESTVAFACTLAKHRNSTTLEVKD 499
Query: 490 ILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIRALMEPSQSETITNDPREMI 549
+ HLEKNW++ VPGF + E Q K+ + ++ A M+ S + T + ++ I
Sbjct: 500 LQCHLEKNWNIRVPGFGNVE---QYKTFKKPHFPENHKLRVAAMKKSIALTQASSRKQQI 556
Query: 550 RQGLGNPVGVNTHMKSSASSEQLLMPSGSQMLQ 582
R+ + + +QL S Q LQ
Sbjct: 557 REFKEQQKELKEQQQQEELKQQL-QQSKKQKLQ 588
Score = 47 (21.6 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 1 MAENNLTTTT--SPPKALQSPNPMPDPXXXXXXXXXXXXALVSTQTPAT-TSFSPSLDS 56
+ +NNL TT SP + + + P P +T +P T TS +P++ S
Sbjct: 195 LRKNNLVNTTNFSPVQNIGTTTPPPSSTVVGITSPTLTQ---TTSSPITATSITPTITS 250
Score = 39 (18.8 bits), Expect = 2.5e-19, Sum P(3) = 2.5e-19
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 399 SLSLTGSQPDATVXXXXXXXXXXXXXXEATNQLLGKRK 436
S ++T S P +T+ +T +L K+K
Sbjct: 338 SSNIT-SNPTSTINTPTTTTTTTTATSNSTGTILSKQK 374
>SGD|S000002552 [details] [associations]
symbol:TAF12 "Subunit (61/68 kDa) of TFIID and SAGA
complexes" species:4932 "Saccharomyces cerevisiae" [GO:0017025
"TBP-class protein binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0051123 "RNA polymerase II transcriptional
preinitiation complex assembly" evidence=IMP] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IDA;IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005669 "transcription factor
TFIID complex" evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IDA;IMP] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0001075 "RNA polymerase II core promoter sequence-specific DNA
binding transcription factor activity involved in preinitiation
complex assembly" evidence=IC] [GO:0032947 "protein complex
scaffold" evidence=IMP] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 SGD:S000002552 GO:GO:0006355 GO:GO:0016573
EMBL:BK006938 GO:GO:0003682 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0000124 GO:GO:0046695 GO:GO:0032947 GO:GO:0001102
GO:GO:0017025 EMBL:Z50046 GO:GO:0005669 GO:GO:0051123
eggNOG:COG5624 GeneTree:ENSGT00390000002144 KO:K03126
OrthoDB:EOG45TGXB PIR:S57972 RefSeq:NP_010429.1
ProteinModelPortal:Q03761 SMR:Q03761 DIP:DIP-1302N IntAct:Q03761
MINT:MINT-408447 STRING:Q03761 PaxDb:Q03761 PeptideAtlas:Q03761
EnsemblFungi:YDR145W GeneID:851723 KEGG:sce:YDR145W CYGD:YDR145w
HOGENOM:HOG000141888 OMA:YRSNRPT NextBio:969433
Genevestigator:Q03761 GermOnline:YDR145W Uniprot:Q03761
Length = 539
Score = 256 (95.2 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 48/107 (44%), Positives = 78/107 (72%)
Query: 428 TNQLLGKRKIQDLVSQV-----DSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKS 482
T +++ KRK+++LV V D + +D +VE+LLL++ADDF+ +VT+F+C LAKHRKS
Sbjct: 411 TQRVMSKRKLRELVKTVGIDEGDGETVIDGDVEELLLDLADDFVTNVTAFSCRLAKHRKS 470
Query: 483 STLESKDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMI 529
LE++DI LHLE+NW++ +PG+S++E RK S ++++L+ I
Sbjct: 471 DNLEARDIQLHLERNWNIRIPGYSADEIRSTRKWNPSQNYNQKLQSI 517
>FB|FBgn0011290 [details] [associations]
symbol:Taf12 "TBP-associated factor 12" species:7227
"Drosophila melanogaster" [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0001129 "TBP-class protein binding RNA polymerase II
transcription factor activity involved in preinitiation complex
assembly" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0000124 "SAGA
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
EMBL:AE014297 GO:GO:0022008 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0000124 GO:GO:0005669 GO:GO:0001129 CTD:6883 eggNOG:COG5624
GeneTree:ENSGT00390000002144 KO:K03126 EMBL:U06450 EMBL:U06456
EMBL:S67741 EMBL:AY061435 PIR:A49453 PIR:S42222 RefSeq:NP_524320.1
RefSeq:NP_731616.1 RefSeq:NP_731617.2 UniGene:Dm.2806
ProteinModelPortal:P49905 SMR:P49905 DIP:DIP-779N IntAct:P49905
MINT:MINT-319520 STRING:P49905 PaxDb:P49905 PRIDE:P49905
EnsemblMetazoa:FBtr0082440 EnsemblMetazoa:FBtr0082442 GeneID:41406
KEGG:dme:Dmel_CG17358 FlyBase:FBgn0011290 InParanoid:P49905
OMA:VKSTSAF OrthoDB:EOG4DJHCX PhylomeDB:P49905 GenomeRNAi:41406
NextBio:823701 Bgee:P49905 GermOnline:CG17358 Uniprot:P49905
Length = 196
Score = 209 (78.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 36/100 (36%), Positives = 67/100 (67%)
Query: 431 LLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDI 490
+L K ++ +LV +VD+ ++D +VE+LLL+I DDF++ AKHRKS+ +E +D+
Sbjct: 91 MLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDV 150
Query: 491 LLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
LH E+ +++ +PGF ++E +++ ++ H +RL +IR
Sbjct: 151 QLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIR 190
Score = 41 (19.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 149 SGLIGQTGHLPG--MLSGQASAAAAQFNLQSPLMASPR 184
SGL TG + G S S+AA N +P++ PR
Sbjct: 61 SGLGTGTGPISGGSKSSNHTSSAAGSEN--TPMLTKPR 96
Score = 38 (18.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 22/91 (24%), Positives = 32/91 (35%)
Query: 167 SAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMGILNLSSHLRANPLY 226
S ++A L P MASP Q + S NS Q+ + +G P+
Sbjct: 24 STSSASGLLHDPPMASPSQHSPMTNNS-----NSSSQNGGPVSGLGT-------GTGPIS 71
Query: 227 AXXXXXXXXXXXXLSQQNP-LTSPQIQNLSR 256
S+ P LT P++ L R
Sbjct: 72 GGSKSSNHTSSAAGSENTPMLTKPRLTELVR 102
>UNIPROTKB|J9NXV6 [details] [associations]
symbol:J9NXV6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
GO:GO:0005669 GeneTree:ENSGT00390000002144 EMBL:AAEX03008539
Ensembl:ENSCAFT00000005499 OMA:NFSSIKL Uniprot:J9NXV6
Length = 161
Score = 225 (84.3 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 42/75 (56%), Positives = 61/75 (81%)
Query: 429 NQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESK 488
NQ+L K+K+QDLV +VD +++ +VE++LL+IADDFI+SV + AC LA+HRKSSTLE K
Sbjct: 87 NQVLTKKKLQDLVREVDPNEQLNEDVEEMLLQIADDFIESVVTAACQLARHRKSSTLEVK 146
Query: 489 DILLHLEKNWHLTVP 503
D+ LHLE+ ++ +P
Sbjct: 147 DVQLHLERQRNMWIP 161
>ASPGD|ASPL0000036544 [details] [associations]
symbol:AN2769 species:162425 "Emericella nidulans"
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] InterPro:IPR003228
InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998 EMBL:BN001306
GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743
EMBL:AACD01000049 GO:GO:0005669 eggNOG:COG5624 KO:K03126
OrthoDB:EOG45TGXB RefSeq:XP_660373.1 ProteinModelPortal:Q5B9L1
SMR:Q5B9L1 EnsemblFungi:CADANIAT00010338 GeneID:2873945
KEGG:ani:AN2769.2 HOGENOM:HOG000193877 OMA:YNIRIPG Uniprot:Q5B9L1
Length = 588
Score = 181 (68.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 38/105 (36%), Positives = 68/105 (64%)
Query: 430 QLLGKRKIQDLVSQVDSQGK---VDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLE 486
++L K+ + LV QV G+ + P+ E+ +L++ADDF+D V + AC LAK R SS+LE
Sbjct: 475 RVLSKKMLDVLVRQVTGGGEGEGLTPDAEEFMLQMADDFVDDVITAACRLAKLRHSSSLE 534
Query: 487 SKDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIRA 531
+DI L LE+N+++ + GFS+++ +K + ++++ I+A
Sbjct: 535 IRDIQLVLERNYNMRISGFSTDDLRTVKKPQPTQGWTQKMSAIQA 579
Score = 51 (23.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 34/141 (24%), Positives = 48/141 (34%)
Query: 165 QASAAAAQFNLQSPLMASPRQKPGVVPGSQFHP---GNSPGQSLPGMQAMGILNLSSHLR 221
+ S A+F Q L + +Q+ G SQ P G P + P A G S +
Sbjct: 203 EGSEFLAKFKEQQDLFKAQQQRAGTQHSSQQLPQQSGARPVTTAPTTSA-GAPTAPSAVH 261
Query: 222 ANPLYAXXXXXXXXXXXXLSQQNPLTSPQIQNLSRTSSSLAFMNPQLSGLAQNGQPGMMQ 281
P A SP Q +S+ P ++ QP Q
Sbjct: 262 PGPTPAAHTINSAVNAARNQAAQAAMSPTPQPGQASSNQGPTPAPAVAAGTPQQQPP--Q 319
Query: 282 NSLSQQQWLKQMPAMSAP-GS 301
+ +S QQ +SAP GS
Sbjct: 320 SQMSAQQNASGFNQVSAPDGS 340
Score = 48 (22.0 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 250 QIQNLSRTSSSLAFM--NPQLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAP-GSPSFRL 306
+I N SR + S + + +LS L+Q+ GM ++Q +QM A SA G P R
Sbjct: 48 EILN-SRDAQSPEYQQAHTRLSQLSQSLMKGMRMYQQNRQLQHQQMQAASAAQGQPVQRS 106
Query: 307 Q 307
Q
Sbjct: 107 Q 107
>UNIPROTKB|D4A8J1 [details] [associations]
symbol:D4A8J1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR003228 InterPro:IPR009072
Pfam:PF03847 ProDom:PD012998 GO:GO:0051091 GO:GO:0003677
GO:GO:0003700 GO:GO:0003713 Gene3D:1.10.20.10 GO:GO:0006367
GO:GO:0043966 GO:GO:0004402 GO:GO:0005669 GO:GO:0030914
GO:GO:0033276 GO:GO:0000125 OrthoDB:EOG4ZCT5X IPI:IPI00780698
Ensembl:ENSRNOT00000057611 OMA:GSIANNA Uniprot:D4A8J1
Length = 152
Score = 163 (62.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 41/105 (39%), Positives = 60/105 (57%)
Query: 426 EATNQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTL 485
E N K+K DLV +VD ++D +VE L +IAD SV + AC LA+ KS T
Sbjct: 48 ENNNNNNKKKKKTDLVRKVDPNQQLDEDVEKTLPQIAD----SVVTAACQLARP-KSGTG 102
Query: 486 ESKDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIR 530
E KD+ LH + W++ +PG SEE + S++ H +R+ +IR
Sbjct: 103 EVKDVQLHPDCLWNMWIPGLGSEEIPPSKNVCSTEAHKQRMVLIR 147
>UNIPROTKB|G4NDQ9 [details] [associations]
symbol:MGG_00885 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847
ProDom:PD012998 EMBL:CM001235 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0005669 KO:K03126 RefSeq:XP_003718081.1
ProteinModelPortal:G4NDQ9 EnsemblFungi:MGG_00885T0 GeneID:2674565
KEGG:mgr:MGG_00885 Uniprot:G4NDQ9
Length = 814
Score = 168 (64.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 39/110 (35%), Positives = 66/110 (60%)
Query: 429 NQLLGKRKIQDLVSQV---DSQGK----VDPEVEDLLLEIADDFIDSVTSFACNLAKHRK 481
+++L K+K+ +LV QV ++G + PEVE+ +L +AD F+D+V AC AK R
Sbjct: 695 DRVLSKKKLDELVRQVCGGTAEGLDGNLLTPEVEESVLTLADSFVDNVLHSACRNAKERG 754
Query: 482 SSTLESKDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIRA 531
S LE +DI L LE+ +++ +PG+S++E RK S ++ ++A
Sbjct: 755 SKVLEIRDIQLVLERTYNIRIPGYSADELRTVRKVQPSAAWISKMSAVQA 804
Score = 43 (20.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 151 LIGQTGHLPGMLSGQASAAAAQFNL--QSPLMASPRQKPG--VVPGSQFHPGNSPGQ 203
++ G M +G A+A N Q A P+ +P V+P HP PGQ
Sbjct: 565 VVNNAGTPTPMSAGGVMASAPPPNQIQQQHQQAHPQHQPNGTVIPTG--HPHAHPGQ 619
Score = 42 (19.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 262 AFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAPGSPSFRLQQ 308
A N Q++G+ + PG + + +Q Q A AP + S +QQ
Sbjct: 391 AAKNQQMTGMGRGQAPGALGQA-AQPGPQAQAGANVAPAAGSPMVQQ 436
Score = 38 (18.4 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 174 NLQSPLMASPRQKPGVVPGSQFHPGNSPGQ 203
N Q P Q+PG P Q P P Q
Sbjct: 91 NQQGQQPTQPGQQPGQQPQQQ--PTQQPQQ 118
Score = 38 (18.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 1 MAENNLTTTTSPPKALQSPNPM 22
M N + P KA Q+P P+
Sbjct: 630 MVPRNPIAKSLPEKAQQTPQPV 651
Score = 38 (18.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 11/36 (30%), Positives = 13/36 (36%)
Query: 273 QNGQPGMMQNSLSQQQWLKQMPAMSAPGSPSFRLQQ 308
Q QPG QQQ +Q P + QQ
Sbjct: 96 QPTQPGQQPGQQPQQQPTQQPQQQQQQAQPQQQQQQ 131
Score = 38 (18.4 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 273 QNGQPGMMQNSLSQQQWLKQMPAMSAPGSPS 303
Q QP Q +Q Q Q PA SP+
Sbjct: 121 QQAQPQQQQQQQAQPQ---QQPAQPQQTSPN 148
Score = 37 (18.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 12/48 (25%), Positives = 17/48 (35%)
Query: 165 QASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMG 212
Q AQ Q A P+Q+P + + +P P A G
Sbjct: 117 QQQQQQAQPQQQQQQQAQPQQQPAQPQQTSPNMTRAPAPQQPAAGAQG 164
Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 35/162 (21%), Positives = 55/162 (33%)
Query: 150 GLIGQTGHLPGMLSGQASAAAAQFNLQSPLMASP-----RQKPGVVP--GSQFHPGNSPG 202
G +GQ PG QA A A SP++ P Q+P + P G+Q H
Sbjct: 407 GALGQAAQ-PGP-QAQAGANVAPA-AGSPMVQQPPGPVGAQQPTIKPEPGTQQHQAQIQQ 463
Query: 203 QSLPGMQAMGILNLSSHLRANPLYAXXXXXXXXXXXXLSQQNPLTSPQIQNLSRTSSS-- 260
Q Q + + + +PQ + T++
Sbjct: 464 QQFQQQQQQQFQQQQQQ-QQQLQHQQHQGQMNTPITAAHTAGRVQTPQSGTPTTTTAPPP 522
Query: 261 LAFMNPQ-LSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAPGS 301
AF + +S + Q G +Q QQQ +Q +A G+
Sbjct: 523 QAFSHAAAVSAITQRQNSGPIQTISQQQQAQQQSQRPNANGT 564
>WB|WBGene00006396 [details] [associations]
symbol:taf-12 species:6239 "Caenorhabditis elegans"
[GO:0005669 "transcription factor TFIID complex" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR003228 InterPro:IPR009072 Pfam:PF03847 ProDom:PD012998
GO:GO:0005634 GO:GO:0009792 GO:GO:0006352 Gene3D:1.10.20.10
SUPFAM:SSF47113 GO:GO:0040035 EMBL:AL132860 GO:GO:0005669
GeneTree:ENSGT00390000002144 GeneID:176617 KEGG:cel:CELE_Y56A3A.4
CTD:176617 HOGENOM:HOG000019961 RefSeq:NP_001255144.1
ProteinModelPortal:Q9U226 SMR:Q9U226 DIP:DIP-24869N IntAct:Q9U226
MINT:MINT-1062984 STRING:Q9U226 EnsemblMetazoa:Y56A3A.4a
UCSC:Y56A3A.4 WormBase:Y56A3A.4a InParanoid:Q9U226 OMA:PTEAHKQ
NextBio:893318 ArrayExpress:Q9U226 Uniprot:Q9U226
Length = 342
Score = 134 (52.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 31/109 (28%), Positives = 61/109 (55%)
Query: 431 LLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHRKSSTLESKDI 490
++ K K+ DL+ Q+ S ++ V+D+L+E ADDF+ S+ AC + K+R+ +ES+DI
Sbjct: 228 IMEKSKLDDLMQQISSTTVLEENVKDVLVEYADDFVSSLIDKACKMIKNREVKKIESRDI 287
Query: 491 LLHLEKNWHL-TVPGFSSEERNHQ--------RKSLSSDVHSKRLEMIR 530
L+ +++ VP +S Q K + ++ H +R+ +++
Sbjct: 288 EFILKNVYNMPVVPRAASHNFGSQTEVIDLSKEKFVPTEAHKQRVALLK 336
Score = 60 (26.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 240 LSQQNPLTSPQ----IQNLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQMPA 295
+ + +P TSP +Q + +++L+ +P G+ G N QQQ P
Sbjct: 3 MEEFSPPTSPNNHVIVQANPQIAAALSTNSPMQQGIPPQGHQN--PNEQQQQQQFVGQPP 60
Query: 296 MSAPGSPSFRLQQHQR 311
M G P R+Q Q+
Sbjct: 61 MGGMGGP-MRMQMPQQ 75
Score = 53 (23.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 23/72 (31%), Positives = 31/72 (43%)
Query: 153 GQTGHLPGMLSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMG 212
G +GHL GM+ G Q +Q +Q G P QF P +SP LP Q M
Sbjct: 139 GPSGHLMGMVGGPPP----QHMMQ-------QQGGGGPP--QFVPNSSP-MPLPPQQIMQ 184
Query: 213 ILNLSSHLRANP 224
+ + H + P
Sbjct: 185 VQHQQQHQQPPP 196
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.125 0.349 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 587 428 0.00085 118 3 11 23 0.47 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 606 (64 KB)
Total size of DFA: 222 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.83u 0.17s 36.00t Elapsed: 00:00:01
Total cpu time: 35.84u 0.17s 36.01t Elapsed: 00:00:01
Start: Fri May 10 23:37:51 2013 End: Fri May 10 23:37:52 2013