Your job contains 1 sequence.
>007853
MSLVSSPEPSATSYRKTKLYTLKGSGHSSALSTQAFGSDKHKMMCQTDSYSSENYEDYIL
DSPTEELIHPSSSADSGNSFQRQGAPSHQLRAGSSFPMAAQSPLDSSFMSMRRCHGYQPS
FESGYLENQCPDPVDYDEDTMRLKLQELERALLDDTVGDEDDDMFATIQNMEVEGEWPEP
VQNVPFHDSPKESSSSDSILSSISSNKEVSQLSPRTLKQLLIDCAATLSDGNIEEATTII
NELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEV
CPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGV
DDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRPGEALVVNF
AFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTNTSPFFPRFIEAYNYYSV
VFESLDATLPRESQDRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTS
CPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAWK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007853
(587 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 1799 1.7e-185 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 1130 1.3e-114 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 1025 1.8e-103 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 1021 4.7e-103 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 641 8.8e-63 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 559 1.1e-56 2
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 343 1.5e-56 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 579 3.3e-56 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 558 5.5e-54 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 553 1.9e-53 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 546 1.0e-52 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 533 2.4e-51 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 517 1.2e-49 1
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 510 6.7e-49 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 507 1.4e-48 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 488 1.4e-46 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 489 1.8e-46 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 471 1.5e-44 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 455 4.5e-43 1
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 455 4.5e-43 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 432 1.2e-40 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 411 6.2e-38 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 366 3.4e-37 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 381 3.5e-35 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 379 6.1e-35 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 272 1.6e-20 1
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 261 1.5e-19 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 252 3.0e-19 2
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 214 1.2e-16 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 225 2.0e-15 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 211 5.1e-14 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 202 4.1e-13 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 180 5.8e-13 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 201 5.9e-13 1
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 1799 (638.3 bits), Expect = 1.7e-185, P = 1.7e-185
Identities = 376/594 (63%), Positives = 441/594 (74%)
Query: 1 MSLVSSPEPSATSYRKTKLYTLKGSGHSSALST-QAFGSDKHKMMCQTD-SYSSENYEDY 58
MSLV S EPS SYR KLYTL +G+++ +S+ Q F D+ K C TD SY S++YE Y
Sbjct: 16 MSLVRSAEPS--SYRNPKLYTLNENGNNNGVSSAQIFDPDRSKNPCLTDDSYPSQSYEKY 73
Query: 59 ILDSPTEELI-HPSSSADSGNSFQRQGAPSHQLRAGSSFPMAAQSPLDSSFMSMRRCHG- 116
LDSPT+E + HP S S +SF + +Q R M Q PLDS+ S R G
Sbjct: 74 FLDSPTDEFVQHPIGSGASVSSFGSLDSFPYQSRPVLGCSMEFQLPLDSTSTSSTRLLGD 133
Query: 117 YQPSFESGYLENQCPDPVD-YDEDTMRLKLQELERALLXXXXXXXXXXMFATIQN-MEVE 174
YQ S + D V+ +D++ MR K+QELERALL I N ME++
Sbjct: 134 YQAVSYSPSM-----DVVEEFDDEQMRSKIQELERALLGDEDDK-----MVGIDNLMEID 183
Query: 175 GEWPEPVQNVPFHXXXXXXXXXXXXXXXXXXXXXXXQLSPRTLKQLLIDCAATLSDGNIE 234
EW ++ H Q +P KQ+LI CA LS+G +E
Sbjct: 184 SEWSYQNESEQ-HQDSPKESSSADSNSHVSSKEVVSQATP---KQILISCARALSEGKLE 239
Query: 235 EATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAM 294
EA +++NELRQ+VSIQGDP QRIAAYMVEGLAARMAASGKF+Y+ALKCKEPPS +RLAAM
Sbjct: 240 EALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLAAM 299
Query: 295 QILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPH 354
Q+LFEVCPCFKFGF+AANGAI+EA KGE+ VHIIDFDINQG+QY+TLI++IA LPG RP
Sbjct: 300 QVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPR 359
Query: 355 LRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRPGE 414
LRLTG+DDPESVQR +GGL+IIGLRLE LAE GV F+F A+PSKTS+V+PS L C+PGE
Sbjct: 360 LRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGE 419
Query: 415 ALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTNTSPFFPRFIEA 474
L+VNFAFQLHHMPDESV+TVNQRD+LL MVKSLNPKLVTVVEQD+NTNTSPFFPRFIEA
Sbjct: 420 TLIVNFAFQLHHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEA 479
Query: 475 YNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMT 534
Y YYS VFESLD TLPRESQ+RMNVERQCLARDIVNI+ACEGEERIERYE AGKWRARM
Sbjct: 480 YEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMM 539
Query: 535 MAGFTSCPMSADVTDMIRKLIKQ-YCDRYKLKEELGLLHFGWEDKSLIVASAWK 587
MAGF PMSA VT+ I+ LIKQ YC++YKLKEE+G LHF WE+KSLIVASAW+
Sbjct: 540 MAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 213/377 (56%), Positives = 280/377 (74%)
Query: 212 LSPRTLKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAA 271
+S R L+ L+ CA +S+ ++ A +++ +LRQMVS+ G+P QR+ AY++EGL A++A+
Sbjct: 114 ISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLAS 173
Query: 272 SGKFLYKAL-KCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDF 330
SG +YKAL +C EP S++ L+ M IL+EVCP FKFG+M+ANGAI EA K E RVHIIDF
Sbjct: 174 SGSSIYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDF 233
Query: 331 DINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390
I QGSQ++TLIQ A+ PG P +R+TG+DD S GGL I+G RL LA+ VP
Sbjct: 234 QIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVP 293
Query: 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNP 450
FEF++V S V P L RPGEAL VNFAF LHHMPDESVST N RD+LLRMVKSL+P
Sbjct: 294 FEFNSVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSP 353
Query: 451 KLVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVN 510
K+VT+VEQ+ NTNT+ FFPRF+E NYY+ +FES+D TLPR+ + R+NVE+ CLARD+VN
Sbjct: 354 KVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVN 413
Query: 511 IIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGL 570
IIACEG +R+ER+EL GKWR+R MAGFT P+S V I+ L++ Y D+Y+L+E G
Sbjct: 414 IIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGA 473
Query: 571 LHFGWEDKSLIVASAWK 587
L+ GW + L+ + AWK
Sbjct: 474 LYLGWMHRDLVASCAWK 490
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
Identities = 201/376 (53%), Positives = 270/376 (71%)
Query: 212 LSPRTLKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAA 271
+S LK +L+ CA +S+ N+ A + ELR MVSI G+P QR+ AYM+EGL AR+AA
Sbjct: 45 ISRGDLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAA 104
Query: 272 SGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFD 331
SG +YK+L+ +EP S + L+ + +L EVCP FKFG+M+ANGAI EA K E+R+HIIDF
Sbjct: 105 SGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQ 164
Query: 332 INQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391
I QGSQ+I LIQ A+ PG P++R+TGV D SV L + RLE LA+ VPF
Sbjct: 165 IGQGSQWIALIQAFAARPGGAPNIRITGVGDG-SV------LVTVKKRLEKLAKKFDVPF 217
Query: 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPK 451
F+AV + V L+ R GEAL VNFA+ LHH+PDESVS N RD+LLRMVKSL+PK
Sbjct: 218 RFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPK 277
Query: 452 LVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNI 511
+VT+VEQ+ NTNTSPF PRF+E +YY+ +FES+D LPR ++R+N+E+ C+ARD+VNI
Sbjct: 278 VVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNI 337
Query: 512 IACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLL 571
IACEG ERIER+EL GKW++R +MAGF P+S+ ++ IR L++ Y + Y ++E G L
Sbjct: 338 IACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGAL 397
Query: 572 HFGWEDKSLIVASAWK 587
+ GW D+ L+ + AWK
Sbjct: 398 YLGWMDRILVSSCAWK 413
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 192/376 (51%), Positives = 266/376 (70%)
Query: 212 LSPRTLKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAA 271
+S LK +L +CA + + ++E +I++L+QMVS+ G+P QR+ AYM+EGL AR+A+
Sbjct: 222 ISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLAS 281
Query: 272 SGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFD 331
SG +YKAL+CK+P + L M IL+E CP FKFG+ +ANGAI EA K E VHIIDF
Sbjct: 282 SGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQ 341
Query: 332 INQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391
I+QG Q+++LI+ + + PG P++R+TG+DDP S GGL+++G RL LAE GVPF
Sbjct: 342 ISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPF 401
Query: 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPK 451
EFH + V L R GEAL VNF LHHMPDESV+ N RD+LLR+VK L+P
Sbjct: 402 EFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPN 461
Query: 452 LVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNI 511
+VT+VEQ+ NTNT+PF PRF+E N+Y VFES+D L R+ ++R+NVE+ CLAR++VN+
Sbjct: 462 VVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNL 521
Query: 512 IACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLL 571
IACEG ER ER+E GKWR+R MAGF P+S+ V I+ L++ Y ++Y L+E G L
Sbjct: 522 IACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGAL 581
Query: 572 HFGWEDKSLIVASAWK 587
+ GW+++ LI + AW+
Sbjct: 582 YLGWKNQPLITSCAWR 597
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 183/584 (31%), Positives = 287/584 (49%)
Query: 27 HSSALSTQAFGSDKHKMMCQTDSYSSENYEDYILDSPTEEL--IHPSSSADSGNSFQRQG 84
H Q F S + S NY+++ SP +L ++ S S QR G
Sbjct: 79 HQQQQQQQPFYSQAALNAFLSRSVKPRNYQNFQSPSPMIDLTSVNDMSLFGGSGSSQRYG 138
Query: 85 APSHQLRAGSSFPMAAQSPLDSSFMSMRRCHGYQPSFESGYLENQCPDPVD---YDEDTM 141
P + S QS F +R G + C +PV ++ + M
Sbjct: 139 LPVPR-----SQTQQQQSDY-GLFGGIRMGIGSGINNYPTLTGVPCIEPVQNRVHESENM 192
Query: 142 RLKLQELERALLXXXXXXXXXXMFATIQNMEVEGEWPEPVQNV--PFHXXXXXXXXXXXX 199
L+ELE+ LL + I N +W +QN+ P
Sbjct: 193 LNSLRELEKQLLDDDDESGGDDDVSVITNSN--SDW---IQNLVTPNPNPNPVLSFSPSS 247
Query: 200 XXXXXXXXXXXQLSPRTLKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAA 259
+ +Q +++ A +++G E AT I+ + Q +++ + +++
Sbjct: 248 SSSSSSPSTASTTTSVCSRQTVMEIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVD 307
Query: 260 YMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAF 319
+MV L +R+A+ LY + L + Q+L+E+ PCFK GF AAN AI++A
Sbjct: 308 FMVAALRSRIASPVTELY---------GKEHLISTQLLYELSPCFKLGFEAANLAILDAA 358
Query: 320 K---GEKRV-HIIDFDINQGSQYITLIQTIA------SLPGNRPHLRLTGVDDPESVQRL 369
G + H+IDFDI +G QY+ L++T++ S N P +++T V + L
Sbjct: 359 DNNDGGMMIPHVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVAN-NVYGCL 417
Query: 370 V--GG---LQIIGLRLESLAEALGVPFEFHAVPS-KTSLVTPSMLECRPGEALVVNFAFQ 423
V GG L+ +G L L + LG+ F+ V S + + L C P E L VN AF+
Sbjct: 418 VDDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFK 477
Query: 424 LHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFE 483
L+ +PDESV T N RD+LLR VK L P++VT+VEQ+MN+NT+PF R E+ Y + E
Sbjct: 478 LYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLE 537
Query: 484 SLDATLPRESQDRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPM 543
S+++T+P + DR VE + + R +VN +ACEG +RIER E+ GKWR RM+MAGF P+
Sbjct: 538 SVESTVPSTNSDRAKVE-EGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPL 596
Query: 544 SADVTDMIRKLIKQYCDRYKLKEELGLLHFGWEDKSLIVASAWK 587
S + + ++ + + +KE+ G + FGW ++L VASAW+
Sbjct: 597 SEKIAESMKSRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 559 (201.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 125/373 (33%), Positives = 204/373 (54%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L+ LL+ CA +S + A ++ ++R+ S G+ +R+A Y L AR+A +G +
Sbjct: 393 LRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQI 452
Query: 277 YKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGS 336
Y AL K+ ++D L A Q VCP K + AN +++ +HIIDF I+ G
Sbjct: 453 YTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGF 512
Query: 337 QYITLIQTIA-SLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA 395
Q+ LI ++ S PG P LR+TG++ P+ R G+Q G RL + VPFE++A
Sbjct: 513 QWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNA 572
Query: 396 VPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTV 455
+ K + L+ R GE +VVN F+ ++ DE+V + RD +L++++ +NP +
Sbjct: 573 IAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIP 632
Query: 456 VEQDMNTNTSPFF-PRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIAC 514
N N +PFF RF EA +YS VF+ D+ L RE + R+ E++ R+IVN++AC
Sbjct: 633 AILSGNYN-APFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVAC 691
Query: 515 EGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIR-KLIKQYCDRYKLKEELGLLHF 573
EG ER+ER E +W+AR+ AGF P+ ++ ++ K+ Y + + + L
Sbjct: 692 EGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQ 751
Query: 574 GWEDKSLIVASAW 586
GW+ + + +S W
Sbjct: 752 GWKGRIVYASSLW 764
Score = 42 (19.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 2 SLVSSPEPSATSYRKTKL---YTLKGSGHSSALSTQAFGSDKHKMMCQTDSYSSE 53
S + +P PS ++ T T G G +SA+ FG D M + D + +
Sbjct: 182 SWLHTPMPSNFVFQSTSRSNSVTGGGGGGNSAVYGSGFGDDLVSNMFKDDELAMQ 236
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 343 (125.8 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 78/212 (36%), Positives = 117/212 (55%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L LL+ CA ++ G+++ A + +L + S GD QRIAAY E LA R+ S L
Sbjct: 54 LIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGL 113
Query: 277 YKALKCKEPPS---SDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDIN 333
YKAL + + S+ + ++ FE+ P K ++ N AI+EA +GEK VH+ID D +
Sbjct: 114 YKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDAS 173
Query: 334 QGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393
+ +Q++ L+Q S P PHLR+TGV + V L+ + RL AE L +PF+F
Sbjct: 174 EPAQWLALLQAFNSRPEGPPHLRITGVHHQKEV------LEQMAHRLIEEAEKLDIPFQF 227
Query: 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLH 425
+ V S+ + L + GEAL V+ QLH
Sbjct: 228 NPVVSRLDCLNVEQLRVKTGEALAVSSVLQLH 259
Score = 288 (106.4 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 60/151 (39%), Positives = 88/151 (58%)
Query: 439 DQLLRMVKSLNPKLVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMN 498
D L + L+PK++ V EQD + N S R +E+ Y+ +F+ L+ +PR SQDR+
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 499 VERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQY 558
VE+ +I NII+CEG ER ER+E KW R+ +AGF + P+S R+L+ Q
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLL-QG 448
Query: 559 C--DRYKLKEELGLLHFGWEDKSLIVASAWK 587
C D Y++KEE G W+D+ L SAW+
Sbjct: 449 CGFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 136/376 (36%), Positives = 200/376 (53%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L L+ CA + N+ A ++ + + Q ++A Y + LA R+ +
Sbjct: 180 LVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRD--YT 237
Query: 277 YKALKCKEP-PSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQG 335
+ C PS + + M +E CP KF AN AI+EA +RVH+ID +NQG
Sbjct: 238 AETDVCAAVNPSFEEVLEMHF-YESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQG 296
Query: 336 SQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA 395
Q+ L+Q +A PG P RLTG+ P++ LQ +G +L A+ +GV FEF
Sbjct: 297 MQWPALMQALALRPGGPPSFRLTGIGPPQTENS--DSLQQLGWKLAQFAQNMGVEFEFKG 354
Query: 396 VPSKT-SLVTPSMLECRP-GEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLV 453
+ +++ S + P M E RP E LVVN F+LH + S S ++LL VK++ P +V
Sbjct: 355 LAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSI----EKLLNTVKAIKPSIV 410
Query: 454 TVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIA 513
TVVEQ+ N N F RF EA +YYS +F+SL+ + SQDR+ E L R I+N++A
Sbjct: 411 TVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVY-LGRQILNVVA 469
Query: 514 CEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYC--DRYKLKEELGLL 571
EG +R+ER+E A +WR RM AGF + + L+ Y D Y+++E G L
Sbjct: 470 AEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCL 529
Query: 572 HFGWEDKSLIVASAWK 587
GW+ + LI SAWK
Sbjct: 530 MIGWQTRPLITTSAWK 545
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 140/375 (37%), Positives = 204/375 (54%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L LL+ CA +S N+EEA ++ E+ Q+ + G QR+AAY E ++AR+ S +
Sbjct: 290 LLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGI 349
Query: 277 YKALKCKEPPSSDRL---AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDIN 333
Y AL + P + L +A Q+ + P KF AN AI EAF+ E VHIID DI
Sbjct: 350 YAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIM 409
Query: 334 QGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393
QG Q+ L +AS PG PH+RLTG+ S++ LQ G RL A+ LG+PFEF
Sbjct: 410 QGLQWPGLFHILASRPGGPPHVRLTGLGT--SME----ALQATGKRLSDFADKLGLPFEF 463
Query: 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRD-QLLRMVKSLNPKL 452
+ K + L R EA+ V++ L H S+ V D L +++ L PK+
Sbjct: 464 CPLAEKVGNLDTERLNVRKREAVAVHW---LQH----SLYDVTGSDAHTLWLLQRLAPKV 516
Query: 453 VTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNII 512
VTVVEQD++ + F RF+EA +YYS +F+SL A+ ES++R VE+Q L+++I N++
Sbjct: 517 VTVVEQDLS-HAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVL 575
Query: 513 ACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQY-CDRYKLKEELGLL 571
A G R + WR +M GF ++ + L+ + D Y L ++ G L
Sbjct: 576 AVGGPSRSGEVKFES-WREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTL 634
Query: 572 HFGWEDKSLIVASAW 586
GW+D SL+ ASAW
Sbjct: 635 KLGWKDLSLLTASAW 649
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 137/375 (36%), Positives = 204/375 (54%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L Q L+ CA + N+ A ++ + + + Q ++A Y E LA R+ +
Sbjct: 157 LVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYR----I 212
Query: 277 YKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGS 336
+ + +P S + + M ++ CP KF AN AI+EA + VH+ID +NQG
Sbjct: 213 HPSAAAIDP-SFEEILQMNF-YDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGM 270
Query: 337 QYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAV 396
Q+ L+Q +A PG P RLTGV +P + + G+Q +G +L LA+A+GV F+F+ +
Sbjct: 271 QWPALMQALALRPGGPPSFRLTGVGNPSNRE----GIQELGWKLAQLAQAIGVEFKFNGL 326
Query: 397 PS-KTSLVTPSMLECRP-GEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVT 454
+ + S + P M E R E LVVN F+LH + +S ++LL VK++ P LVT
Sbjct: 327 TTERLSDLEPDMFETRTESETLVVNSVFELHPV----LSQPGSIEKLLATVKAVKPGLVT 382
Query: 455 VVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIAC 514
VVEQ+ N N F RF EA +YYS +F+SL+ + SQDR+ E L R I+N++A
Sbjct: 383 VVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVY-LGRQILNLVAT 441
Query: 515 EGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYC--DRYKLKEELGLLH 572
EG +RIER+E +WR RM AGF + +D L+ D Y+++E G L
Sbjct: 442 EGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLM 501
Query: 573 FGWEDKSLIVASAWK 587
W+ K LI ASAWK
Sbjct: 502 LAWQTKPLIAASAWK 516
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 131/376 (34%), Positives = 200/376 (53%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L L+ CA + N++ A ++ + + S Q +++A Y EGLA R +
Sbjct: 152 LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARR-------I 204
Query: 277 YKALKCKEPPSSDRLAAMQILF-EVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQG 335
Y+ + S +QI F E CP KF AN AI+E F ++VH+ID +N G
Sbjct: 205 YRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHG 264
Query: 336 SQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA 395
Q+ LIQ +A P P RLTG+ + +Q +G +L LA +GV FEF +
Sbjct: 265 LQWPALIQALALRPNGPPDFRLTGIGYS------LTDIQEVGWKLGQLASTIGVNFEFKS 318
Query: 396 VP-SKTSLVTPSMLECRPG-EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLV 453
+ + S + P ML+ RPG E++ VN F+LH + ++ D+ L +KS+ P ++
Sbjct: 319 IALNNLSDLKPEMLDIRPGLESVAVNSVFELHRL----LAHPGSIDKFLSTIKSIRPDIM 374
Query: 454 TVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIA 513
TVVEQ+ N N + F RF E+ +YYS +F+SL+ P SQDR+ E L R I+N++A
Sbjct: 375 TVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP-P--SQDRVMSEL-FLGRQILNLVA 430
Query: 514 CEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYC--DRYKLKEELGLL 571
CEGE+R+ER+E +WR R + GF + ++ L+ Y D Y ++E G L
Sbjct: 431 CEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCL 490
Query: 572 HFGWEDKSLIVASAWK 587
GW+ + LI SAW+
Sbjct: 491 LLGWQTRPLIATSAWR 506
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 128/377 (33%), Positives = 200/377 (53%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L L+ CA + N+ A ++ ++ + Q +++A Y E LA R +
Sbjct: 169 LVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARR-------I 221
Query: 277 YKALKCKEPPSSDRLAAMQILF-EVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQG 335
Y+ + P +Q+ F E CP KF AN AI+EAF+G+KRVH+IDF ++QG
Sbjct: 222 YRLSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQG 281
Query: 336 SQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA 395
Q+ L+Q +A PG P RLTG+ P L +G +L LAEA+ V FE+
Sbjct: 282 LQWPALMQALALRPGGPPVFRLTGIGPPAPDN--FDYLHEVGCKLAHLAEAIHVEFEYRG 339
Query: 396 VPSKTSL-VTPSMLECRPGE--ALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKL 452
+ T + SMLE RP E ++ VN F+LH + + D++L +V + P++
Sbjct: 340 FVANTLADLDASMLELRPSEIESVAVNSVFELHKL----LGRPGAIDKVLGVVNQIKPEI 395
Query: 453 VTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNII 512
TVVEQ+ N N+ F RF E+ +YYS +F+SL+ +P QD++ E L + I N++
Sbjct: 396 FTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEG-VP-SGQDKVMSEVY-LGKQICNVV 452
Query: 513 ACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYC--DRYKLKEELGL 570
AC+G +R+ER+E +WR R AGF + + ++ L+ + + Y+++E G
Sbjct: 453 ACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGC 512
Query: 571 LHFGWEDKSLIVASAWK 587
L GW + LI SAWK
Sbjct: 513 LMLGWHTRPLIATSAWK 529
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 129/376 (34%), Positives = 195/376 (51%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L L+ CA + N+ A ++ ++ + Q +++A Y E LA R+
Sbjct: 221 LVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQ 280
Query: 277 YKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGS 336
+ C SD L M +E CP KF AN AI+EAF+G+KRVH+IDF +NQG
Sbjct: 281 NQIDHCL----SDTLQ-MHF-YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGL 334
Query: 337 QYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA- 395
Q+ L+Q +A G P RLTG+ P L +G +L LAEA+ V FE+
Sbjct: 335 QWPALMQALALREGGPPTFRLTGIGPPAPDNS--DHLHEVGCKLAQLAEAIHVEFEYRGF 392
Query: 396 VPSKTSLVTPSMLECRPG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLV 453
V + + + SMLE RP EA+ VN F+LH + + +++L +VK + P +
Sbjct: 393 VANSLADLDASMLELRPSDTEAVAVNSVFELHKL----LGRPGGIEKVLGVVKQIKPVIF 448
Query: 454 TVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIA 513
TVVEQ+ N N F RF E+ +YYS +F+SL+ +P SQD++ E L + I N++A
Sbjct: 449 TVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEG-VPN-SQDKVMSEVY-LGKQICNLVA 505
Query: 514 CEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDR--YKLKEELGLL 571
CEG +R+ER+E +W R +G + ++ L+ + Y+++E G L
Sbjct: 506 CEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCL 565
Query: 572 HFGWEDKSLIVASAWK 587
GW + LI SAWK
Sbjct: 566 MLGWHTRPLITTSAWK 581
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 122/377 (32%), Positives = 195/377 (51%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAAS-GKF 275
L+ LL CA ++ + AT + E+R S GD QR+A Y E L AR+ +
Sbjct: 224 LRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPP 283
Query: 276 LYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIE-AFKGEKRVHIIDFDINQ 334
+ D L A ++ CP + + AAN +I E A K K +HI+DF +
Sbjct: 284 VSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELAMKATK-LHIVDFGVLY 342
Query: 335 GSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394
G Q+ L++ ++ PG P LR+TG++ P++ R ++ G RL+ + VPFEF+
Sbjct: 343 GFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFN 402
Query: 395 AVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVT 454
+ K +T L PGE VVN +L + PDE+VS + RD +L++ + +NP L
Sbjct: 403 FIAKKWETITLDELMINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFV 462
Query: 455 VVEQDMNTNTSPFF-PRFIEAYNYYSVVFESLDATLPRESQ--DRMNVERQCLARDIVNI 511
E + N SPFF RF EA +YS +F+ D T+ E + +R +ER+ L RD +++
Sbjct: 463 FAEINGMYN-SPFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSV 521
Query: 512 IACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLI-KQYCDRYKLKEELGL 570
I+CEG ER R E +WR R+ AGF +S + ++++ K+Y + + +
Sbjct: 522 ISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNW 581
Query: 571 LHFGWEDKSLIVASAWK 587
+ GW+ + + S WK
Sbjct: 582 MLQGWKGRVIYAFSCWK 598
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 128/382 (33%), Positives = 198/382 (51%)
Query: 212 LSPRTLKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAA 271
L P LK + DCA +SD + EA+ + ++R+ VS GDP +R+A Y E L+ R++
Sbjct: 213 LEPPLLKAIY-DCAR-ISDSDPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLSP 270
Query: 272 SGKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFD 331
+ A + D + + + L + CP KF + AN AI+EA + ++HI+DF
Sbjct: 271 NSP----ATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFG 326
Query: 332 INQGSQYITLIQTIASLPGNRP-HLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390
I QG Q+ L+Q +A+ +P +R++G+ P + L G RL A+ L +
Sbjct: 327 IVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLN 386
Query: 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNP 450
F+F + + L+ S P E L VNF QL+ + DE+ + V D LR+ KSLNP
Sbjct: 387 FDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIV---DTALRLAKSLNP 443
Query: 451 KLVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVN 510
++VT+ E +++ N F R A +YS VFESL+ L R+S++R+ VER+ R I
Sbjct: 444 RVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISG 503
Query: 511 IIACE--GEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLI--KQYCDRYKLKE 566
+I E G R ER E +WR M AGF S +S + L+ Y + Y + E
Sbjct: 504 LIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVE 562
Query: 567 EL-GLLHFGWEDKSLIVASAWK 587
G + W D L+ S+W+
Sbjct: 563 SKPGFISLAWNDLPLLTLSSWR 584
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 130/380 (34%), Positives = 199/380 (52%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L LL+ CA ++ ++ EA+T+++E+ ++ S G P+R+ AY + L R+ +S +L
Sbjct: 40 LLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISS--YL 97
Query: 277 YKALK-CKEPP----SSDRL-AAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDF 330
A E P S ++ +A+Q V P KF AN AI +A GE VHIID
Sbjct: 98 SGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDL 157
Query: 331 DINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390
D+ QG Q+ L +AS P +R+TG + L G RL A +L +P
Sbjct: 158 DVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDL------LASTGRRLADFASSLNLP 211
Query: 391 FEFHAVPSKT-SLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLN 449
FEFH + +L+ PS L R GEA+VV++ Q H + D + + + + L +++ L
Sbjct: 212 FEFHPIEGIIGNLIDPSQLATRQGEAVVVHW-MQ-HRLYDVTGNNL----ETLEILRRLK 265
Query: 450 PKLVTVVEQDMNTNTS-PFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDI 508
P L+TVVEQ+++ + F RF+EA +YYS +F++L L ES +R VE+ L +I
Sbjct: 266 PNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEI 325
Query: 509 VNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQY-CDRYKLKEE 567
NI+A G R +R KW+ ++ GF + + L+ + Y L EE
Sbjct: 326 RNIVAHGGGRR-KRM----KWKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEE 380
Query: 568 LGLLHFGWEDKSLIVASAWK 587
G L GW+D SL+ ASAWK
Sbjct: 381 NGTLRLGWKDLSLLTASAWK 400
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 489 (177.2 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 118/375 (31%), Positives = 194/375 (51%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
L+ LLI CA ++ + A ++ ++R + GD QR+A GL AR+A +G +
Sbjct: 344 LRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQI 403
Query: 277 YKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGS 336
YK + K ++ L A Q+ CP K + N I + +RVH+IDF I G
Sbjct: 404 YKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGF 463
Query: 337 QYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAV 396
Q+ TLI S+ G+ P +R+TG++ P+ R ++ G RL + A+ GVPFE+ A+
Sbjct: 464 QWPTLIHRF-SMYGS-PKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAI 521
Query: 397 PSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVT-- 454
K + L+ E VVN ++ ++ DESV + RD +L ++ +NP L
Sbjct: 522 AKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFG 581
Query: 455 VVEQDMNTNTSPFF-PRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIA 513
+V N +PFF RF EA ++S +F+ L+ +PRE ++RM +E + R+ +N+IA
Sbjct: 582 IVNGAYN---APFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIA 638
Query: 514 CEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDM-IRKLIKQYCDRYKLKEELGLLH 572
CEG ER+ER E +W R +G P + + K+ Y + + ++ L
Sbjct: 639 CEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLL 698
Query: 573 FGWEDKSLIVASAWK 587
GW+ ++++ S WK
Sbjct: 699 QGWKGRTVMALSVWK 713
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 471 (170.9 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 118/381 (30%), Positives = 198/381 (51%)
Query: 218 KQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAAS-GKFL 276
+ LL CA ++S G+ A ++ ++R+ S GD QR+A + L AR+ S G +
Sbjct: 316 RTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMI 375
Query: 277 ---YKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDIN 333
Y ++ K+ ++ L + + P + +N I++A K +HI+DF I
Sbjct: 376 QSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGIL 435
Query: 334 QGSQYITLIQTIA-SLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392
G Q+ IQ ++ S PG R LR+TG++ P+ R +Q G RL + GVPFE
Sbjct: 436 YGFQWPMFIQHLSKSNPGLRK-LRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFE 494
Query: 393 FHAVPSKT-SLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVN-QRDQLLRMVKSLNP 450
++A+ SK + + RP E L VN + ++ D + RD L++++ +NP
Sbjct: 495 YNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNP 554
Query: 451 K--LVTVVEQDMNTNTSPFFP-RFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARD 507
L + V N +PFF RF EA +YS +F+ ATL +E+ +R++ E + R+
Sbjct: 555 NVFLSSTVNGSFN---APFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGRE 611
Query: 508 IVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQ--YCDRYKLK 565
++N+IACEG +R+ER E +W+ RM AGF P+ A++ + R+ +K+ Y + L
Sbjct: 612 VMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLD 671
Query: 566 EELGLLHFGWEDKSLIVASAW 586
E+ GW+ + L +S W
Sbjct: 672 EDSNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 123/393 (31%), Positives = 203/393 (51%)
Query: 220 LLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKA 279
+L++ A SD + A I+ L ++ S GD Q++A+Y ++ L RM SG+ Y+
Sbjct: 146 VLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRT 205
Query: 280 L---KCKEPPSSDRLAAMQIL-F-EVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQ 334
+ E S +L F EV P FG +AANGAI+EA GE ++HI+D
Sbjct: 206 MVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISSTF 265
Query: 335 GSQYITLIQTIASLPGNRPHLRLTGV-------DDPESVQRLVGGLQIIGLRLESLAEAL 387
+Q+ TL++ +A+ + PHLRLT V +D + R+ ++ IG R+E A +
Sbjct: 266 CTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRM---MKEIGNRMEKFARLM 322
Query: 388 GVPFEFHAVPSKTSLVTPSM--LECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV 445
GVPF+F+ + L + L+ +P E L +N +H + S + RD ++
Sbjct: 323 GVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGI----ASRGSPRDAVISSF 378
Query: 446 KSLNPKLVTVVEQD---MNTNTSPFFPRFI----EAYNYYSVVFESLDATLPRESQDRMN 498
+ L P++VTVVE++ + F F+ E ++ V FES + + PR S +R+
Sbjct: 379 RRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLM 438
Query: 499 VERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQY 558
+ER R IV+++ACE + ER E A KW RM +GF + S +V D +R L+++Y
Sbjct: 439 LERAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRY 497
Query: 559 CD----RYKLKEELGLLHFGWEDKSLIVASAWK 587
+ + + G+ W D+ ++ ASAW+
Sbjct: 498 KEGVWSMVQCPDAAGIF-LCWRDQPVVWASAWR 529
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 115/376 (30%), Positives = 182/376 (48%)
Query: 214 PRTLKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASG 273
P ++ LL+ CA ++ + A + E+R+ S GD QR+ + E L AR+ +
Sbjct: 206 PVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTM 265
Query: 274 KFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDIN 333
A + D L A + + CP + AN I E +HIIDF I
Sbjct: 266 TTPISATSSRTS-MVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGIL 324
Query: 334 QGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393
G Q+ LIQ ++ P LR+TG++ P+S R ++ G RL+ + VPFE+
Sbjct: 325 YGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEY 384
Query: 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLV 453
+ +T L GE VVN +L + PDE+VS + RD L++ + +NP L
Sbjct: 385 SFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLF 444
Query: 454 TVVEQDMNTNTSPFF-PRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNII 512
E + T SPFF RF EA + S +F+ + TL + R VER+ + RD +++I
Sbjct: 445 VFAEIN-GTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVI 503
Query: 513 ACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQ-YCDRYKLKEELGLL 571
ACEG ER R E +W+ R+ AGF +S + ++++K+ Y + + + +
Sbjct: 504 ACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWM 563
Query: 572 HFGWEDKSLIVASAWK 587
GW+ + L S WK
Sbjct: 564 FQGWKGRVLYAVSCWK 579
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 112/359 (31%), Positives = 174/359 (48%)
Query: 238 TIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLAAMQIL 297
T+I +++ VS GDP QR+ Y E L+ + S D + + + L
Sbjct: 194 TLIR-IKESVSESGDPIQRVGYYFAEALSHKETESPS------SSSSSSLEDFILSYKTL 246
Query: 298 FEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRP-HLR 356
+ CP KF + AN AI+EA +HI+DF I QG Q+ L+Q +A+ +P +R
Sbjct: 247 NDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIR 306
Query: 357 LTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRPGEAL 416
++G+ P L G RL A L + FEF+ V + L+ S P E L
Sbjct: 307 ISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVL 366
Query: 417 VVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTNTSPFFPRFIEAYN 476
VVNF +L+ + DE+ +TV LR+ +SLNP++VT+ E +++ N F R +
Sbjct: 367 VVNFMLELYKLLDETATTVGTA---LRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLR 423
Query: 477 YYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIACEGEE-----RIERYELAGKWRA 531
+YS VFESL+ L R+S++R+ VER R I++++ + + R E +WR
Sbjct: 424 FYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRV 483
Query: 532 RMTMAGFTSCPMSADVTDMIRKLI--KQYCDRYKLKE-ELGLLHFGWEDKSLIVASAWK 587
M AGF S + L+ Y Y L E E G + W + L+ S+W+
Sbjct: 484 LMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 411 (149.7 bits), Expect = 6.2e-38, P = 6.2e-38
Identities = 111/347 (31%), Positives = 171/347 (49%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQ-RIAAYMVEGLAARMAASGKF 275
L LL C + NI I + S +G P R+ AY +E LA R+A
Sbjct: 274 LVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWPH 333
Query: 276 LYKALKCKEPPSS--DRLA-AMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDI 332
++ +E + D A++ L +V P KF AN ++ AF+G++RVHIIDFDI
Sbjct: 334 IFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDFDI 393
Query: 333 NQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392
QG Q+ + Q++AS H+R+TG+ + +L L G RL AEA+ + FE
Sbjct: 394 KQGLQWPSFFQSLASRINPPHHVRITGIGE----SKLE--LNETGDRLHGFAEAMNLQFE 447
Query: 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHH-MPDESVSTVNQRDQLLRMVKSLNPK 451
FH V + V ML + GE++ VN Q+H + D + + + RD L +++S NP
Sbjct: 448 FHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAI--RD-FLGLIRSTNPI 504
Query: 452 LVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNI 511
+ + EQ+ N+ R + YYS +F+++ L +S R+ VE R+I NI
Sbjct: 505 ALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNI 564
Query: 512 IACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQY 558
+ACEG R ER+ WR + GF S +S + L++ Y
Sbjct: 565 VACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMY 611
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 366 (133.9 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 93/306 (30%), Positives = 158/306 (51%)
Query: 297 LFEVCPCFKFGFMAANGAIIEAFKGEKR--VHIIDFDINQGSQYITLIQTIASLPGNR-- 352
L ++ P +FG + AN AI++A + +HI+D DI+QG Q+ L+Q +A N
Sbjct: 149 LNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSS 208
Query: 353 --PHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLEC 410
P LR+TG R V GL G RL A++LG+ F+FH + + +L+
Sbjct: 209 PPPSLRITGCG------RDVTGLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQI 262
Query: 411 R-------PGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTN 463
R GE + VN LH + ++ + L +KSLN ++VT+ E++ N
Sbjct: 263 RLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGH---FLSAIKSLNSRIVTMAEREANHG 319
Query: 464 TSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIACEGEERIERY 523
F RF EA ++Y +F+SL+ATLP S++R+ +E++ ++I++++A E ER +R+
Sbjct: 320 DHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRH 379
Query: 524 ELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQY--CDRYKLKEELGLLHFGWEDKSLI 581
W M GF + P+ + + L++ + + Y L+ L GW+++ L
Sbjct: 380 RRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLF 439
Query: 582 VASAWK 587
S+WK
Sbjct: 440 SVSSWK 445
Score = 54 (24.1 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARM 269
L++LL A +S N A +++ L S GD +R+ + L+ R+
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 381 (139.2 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 110/381 (28%), Positives = 189/381 (49%)
Query: 217 LKQLLIDCAATLSDGNIEEATT--IINELRQMVSIQGDPP--QRIAAYMVEGLAARMAAS 272
L LL+ A + N T I+ L+ +VS GD +R+AA+ GL+ +
Sbjct: 104 LVHLLVAAADASTGANKSRELTRVILARLKDLVS-PGDRTNMERLAAHFTNGLSKLLERD 162
Query: 273 GKFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDI 332
+ + +D ++A ++L + P FG++ A AI+EA K E+R+HI+D+DI
Sbjct: 163 SVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERRIHIVDYDI 222
Query: 333 NQGSQYITLIQTIASL-PG-NRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390
N+G Q+ +L+Q + S G + HLR+T + + ++ V +Q G RL + A+++G P
Sbjct: 223 NEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQP 282
Query: 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNP 450
F + T+ + S L+ GEA+V+N H+P S T + L K+LNP
Sbjct: 283 FSYQHCKLDTNAFSTSSLKLVRGEAVVINCML---HLPRFSHQTPSSVISFLSEAKTLNP 339
Query: 451 KLVTVVEQDMNT-NTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIV 509
KLVT+V +++ F RF++ + +S +F+SL+A L + R VER + +
Sbjct: 340 KLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFIGPWVA 399
Query: 510 NIIA--CEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEE 567
N + + +E + W + GF +S + L+ + D +++ EE
Sbjct: 400 NWLTRITANDAEVESF---ASWPQWLETNGFKPLEVSFTNRCQAKLLLSLFNDGFRV-EE 455
Query: 568 LGL--LHFGWEDKSLIVASAW 586
LG L GW+ + L+ AS W
Sbjct: 456 LGQNGLVLGWKSRRLVSASFW 476
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 379 (138.5 bits), Expect = 6.1e-35, P = 6.1e-35
Identities = 110/387 (28%), Positives = 191/387 (49%)
Query: 217 LKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASGKFL 276
++QLL+ CA + + I+ L + GD QR+ + + L +R + L
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTL 86
Query: 277 YKALKCKEPPSSDRLAAMQIL----F-EVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFD 331
+ P +D L ++ F ++ P +FGF+AAN AI+ A +G VHI+D
Sbjct: 87 SSTISFL--PQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLS 144
Query: 332 INQGSQYITLIQTIAS-LPGNRPHLRLTGVDDPESVQRLVG-GLQIIGLRLESLAEALGV 389
+ Q TLI +AS L P L+LT V + + + +G +L + A +
Sbjct: 145 LTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFATTRNI 204
Query: 390 PFEFHAVPSKTSLVTPSMLE-CR--PG---EALVVNFAFQLHHMPDESV--STVNQRDQL 441
EF VPS S S+L+ R P EALVVN L ++P+E + S+ + R
Sbjct: 205 TMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVF 264
Query: 442 LRMVKSLNPKLVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVER 501
L+ ++SLNP++VT++E+D++ + R A+NY+ + F++ D + S+ R E
Sbjct: 265 LKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTDTFM---SEQRRWYEA 321
Query: 502 QCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDR 561
+ ++ I N++A EG ER+ER E +W RM A F + D ++ +++++
Sbjct: 322 E-ISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVG 380
Query: 562 YKLKEELG--LLHFGWEDKSLIVASAW 586
+ +K+E L W+ S++ A+ W
Sbjct: 381 WGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 272 (100.8 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 96/351 (27%), Positives = 156/351 (44%)
Query: 253 PP-QRIAAYMVEGLAARMAASGKFLYKALKCKEPPSS--DRLAAMQILFEVCPCFKFGFM 309
PP R A+Y+ E L + + S + PP + R+AA + E P +F
Sbjct: 290 PPFHRAASYITEALHSLLQDSSL----SPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNF 345
Query: 310 AANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIA---SLPGNRPHLRLTGVDDPESV 366
AN I+E+F+G R+HI+DFDI G Q+ +LIQ +A + + P L++T P +V
Sbjct: 346 TANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTV 405
Query: 367 QRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTP-----SMLECRPGEALVVNFA 421
L+ L S A GV FE + + L+ P S+ EA+ VN
Sbjct: 406 SDEFE-LRFTEENLRSFAGETGVSFEIELLNMEI-LLNPTYWPLSLFRSSEKEAIAVN-- 461
Query: 422 FQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTNTSPFFPR-FIEAYNYYSV 480
+P S+ + +LR +K ++P +V ++ + N FP I A YY+
Sbjct: 462 -----LPISSMVS-GYLPLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTS 515
Query: 481 VFESLDATLPRESQDRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTS 540
+ ESLD+ ++ ++ER C+ I ++ R E + WR+ GFT
Sbjct: 516 LLESLDSGNLNNAEAATSIERFCVQPSIQKLLT----NRYRWMERSPPWRSLFGQCGFTP 571
Query: 541 CPMSADVTDMIRKLIKQYCDR-YKLKEELGL---LHFGWEDKSLIVASAWK 587
+S L+++ R + L++ L W+ K L+ SAWK
Sbjct: 572 VTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 261 (96.9 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 98/385 (25%), Positives = 175/385 (45%)
Query: 215 RTLKQLLIDCAATLSDGNIEEATTIINELRQMVSIQGDPPQRIAAYMVEGLAARMAASG- 273
R ++LL CA ++ N + L ++ S GD +R+AA+ + L +++S
Sbjct: 143 RWAEKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSV 202
Query: 274 -KFLYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAF----KGEKRVHII 328
+ + +EV P F AN AI++ K +K +HII
Sbjct: 203 SSSFWPVFTFASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPKDKKDLHII 262
Query: 329 DFDINQGSQYITLIQTIAS-LPGNRPHLRLTGVDD-PESVQRLVGGLQI-IGLRLESLAE 385
D ++ G Q+ TL++ ++ L G P +R+T + D + VG G +L A
Sbjct: 263 DIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYGSQLLGFAR 322
Query: 386 ALGVPFEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV 445
+L + + +V K L+ S P E L+V F+LHH+ S++ ++R + L+ V
Sbjct: 323 SLKINLQI-SVLDKLQLIDTS-----PHENLIVCAQFRLHHLK-HSIN--DERGETLKAV 373
Query: 446 KSLNPKLVTVVEQDMNTNTSPFFPR-FIEAYNYYSVVFESLDATLPRESQDRMNVERQCL 504
+SL PK V + E + ++S F F + Y V++ LD+T ++ ER+ +
Sbjct: 374 RSLRPKGVVLCENNGECSSSADFAAGFSKKLEY---VWKFLDSTSSGFKEENSE-ERKLM 429
Query: 505 ARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKL 564
+ ++ G+ E E KW RM AGF D D + L+++Y + +++
Sbjct: 430 EGEATKVLMNAGDMN-EGKE---KWYERMREAGFFVEAFEEDAVDGAKSLLRKYDNNWEI 485
Query: 565 KEELGLLHFG--WEDKSLIVASAWK 587
+ E G G W+ +++ S WK
Sbjct: 486 RMEDGDTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 252 (93.8 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 89/310 (28%), Positives = 146/310 (47%)
Query: 290 RLAAMQILFEVCPCFKFGFMAANGAIIEAFK--GEKRVHIIDFDINQGSQYITLIQTIAS 347
R+AA + E P +F AN +I+E+ G R+HIIDFD+ G Q+ +L+Q +AS
Sbjct: 346 RIAAYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELAS 405
Query: 348 LPGNRPH-----LRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402
G R L+LT P S L+ L++ A + +PFE + S L
Sbjct: 406 GVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELL-SVELL 464
Query: 403 VTPSM--LECRPGE--ALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQ 458
+ P+ L R E A+ VN +P SV++ +LR +K L+P +V ++
Sbjct: 465 LNPAYWPLSLRSSEKEAIAVN-------LPVNSVAS-GYLPLILRFLKQLSPNIVVCSDR 516
Query: 459 DMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIACEGEE 518
+ N +PF I + Y++ + ESLDA ++QD ++ER + I ++ +
Sbjct: 517 GCDRNDAPFPNAVIHSLQYHTSLLESLDAN---QNQDDSSIERFWVQPSIEKLLM-KRHR 572
Query: 519 RIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDR-YKLKEELGLLHFGWED 577
IER + WR T GF+ +S L+++ R + +++ L W+
Sbjct: 573 WIER---SPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQR 629
Query: 578 KSLIVASAWK 587
K L+ SAWK
Sbjct: 630 KELVTVSAWK 639
Score = 54 (24.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 29/109 (26%), Positives = 44/109 (40%)
Query: 24 GSGHSSALSTQAFGSDKHKMMCQTDSYSSENYEDYILDSPTEELIHPSSSADSGNSFQRQ 83
GSG S +S SD ++C N+ + +P E LI+PS+ N
Sbjct: 147 GSG-SGPVSAPV--SDNSNLLC--------NFPFQEITNPAEALINPSNHCLFYNP--PL 193
Query: 84 GAPSHQLRAGSSF-PMAAQSPLDSSFMSMRRCHGYQPSFESGYLENQCP 131
P+ + +GS P+ S D +RR H +Q F + Q P
Sbjct: 194 SPPAKRFNSGSLHQPVFPLSDPDPGHDPVRRQHQFQFPFYHNNQQQQFP 242
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 214 (80.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 66/199 (33%), Positives = 105/199 (52%)
Query: 337 QYITLIQTIASLPGNRPH--LRLTGV-DDPE-SVQRLVG-GLQIIGLRLESLAEALGVPF 391
Q TLI ++A+ +P L+LT + D E L+G + +G +L + A V
Sbjct: 2 QIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAM 61
Query: 392 EFHAVPSKTSLVTPSMLE-CR--P---GEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV 445
EF + S S S++E R P EALVVN LH++PDE + T N R L+ +
Sbjct: 62 EFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDE-ILTSNLRSVFLKEL 120
Query: 446 KSLNPKLVTVVEQDMNTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLA 505
+ LNP +VT++++D + ++ F R YNY + +++ + L R S+ R E ++
Sbjct: 121 RDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEAD-IS 179
Query: 506 RDIVNIIACEGEERIERYE 524
I N++A EG ER+ER E
Sbjct: 180 WKIDNVVAKEGAERVERLE 198
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 225 (84.3 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 92/369 (24%), Positives = 159/369 (43%)
Query: 225 AATLSDGNIEEATTIINELRQMVSIQ-GDPPQRIAAYMVEGLAARMAASGKFLYKALKCK 283
AA + + + A I+ L Q +S G P +R A Y E L L+ +
Sbjct: 212 AAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEAL-------NNLLHNVSQTL 264
Query: 284 EPPSSD-RLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLI 342
P S ++AA + E+ P +F +N A++E+F G R+HIIDFDI G Q+ +L+
Sbjct: 265 NPYSLIFKIAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLM 324
Query: 343 QTIASLPGNRP-HLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTS 401
Q + P L++T P + +L G L+ A + + + + S
Sbjct: 325 QELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLK--HFASEINISLDIQVL-SLDL 381
Query: 402 LVTPSMLECRPGEALVVNF-AFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDM 460
L + S EA+ VN A H+P +LR VK L+P ++ ++
Sbjct: 382 LGSISWPNSSEKEAVAVNISAASFSHLP-----------LVLRFVKHLSPTIIVCSDRGC 430
Query: 461 NTNTSPFFPRFIEAYNYYSVVFESLDATLPRESQDRMN-VERQCLARDIVNIIACEGEER 519
PF + + + ++ +FESLDA + D M +ER + +I ++ +
Sbjct: 431 ERTDLPFSQQLAHSLHSHTALFESLDAV--NANLDAMQKIERFLIQPEIEKLVL-DRSRP 487
Query: 520 IERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDR-YKLKEELGLLHFGWEDK 578
IER + W+A GF+ S L+++ R + ++++ L W+
Sbjct: 488 IERPMMT--WQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRT 545
Query: 579 SLIVASAWK 587
L+ SAW+
Sbjct: 546 ELVGVSAWR 554
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 211 (79.3 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 94/376 (25%), Positives = 157/376 (41%)
Query: 221 LIDCAATLSDGNIEEATTIINELRQMV-SIQGDPPQRIAAYMVEGLAARMAASGKFLYKA 279
++DC SD ++ A +++ L Q + S G P QR A Y E L + + S + +
Sbjct: 129 VVDCVE--SD-ELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIRL 185
Query: 280 LKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKR---VHIIDFDINQGS 336
E R+ A++ + P F AN AI+++ + VH++DF+I G
Sbjct: 186 SSWSE--IVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGG 243
Query: 337 QYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAV 396
QY +L++ I + LR+T V E +++ L A + + F+ V
Sbjct: 244 QYASLMREITEKSVSGGFLRVTAVVAEECAVET----RLVKENLTQFAAEMKIRFQIEFV 299
Query: 397 PSKT-SLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTV 455
KT +++ + GE VV + + VN LR V +PK+V
Sbjct: 300 LMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNN----LRRV---SPKVVVF 352
Query: 456 VEQDMNTNT--SPFFPR-FIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNII 512
V+ + T S F R F+ A +Y++V ESLDA P + VE L I +
Sbjct: 353 VDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAV 412
Query: 513 ACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDR-YKLKEELGLL 571
+ R E+ WR AG +S L+++ R + + + G L
Sbjct: 413 ETAADRR-HTGEMT--WREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGEL 469
Query: 572 HFGWEDKSLIVASAWK 587
W ++L+ SAW+
Sbjct: 470 VLCWHGRALVATSAWR 485
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 202 (76.2 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 56/201 (27%), Positives = 98/201 (48%)
Query: 395 AVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVT 454
A + ++ + LE P E L VN LH++ ++ L+ VK+++P +VT
Sbjct: 245 AAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGH-----DELAAFLKWVKAMSPAVVT 299
Query: 455 VVEQDMNTNTS-----PFFPRFIE-AYNYYSVVFESLDATLPRESQDRMNVERQCLARDI 508
+ E++ PR + A ++YS VFE+L+AT+P S++R+ VE++ L R+I
Sbjct: 300 IAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREI 359
Query: 509 VNIIACEGEERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQY--CDRYKLKE 566
+ G E +W AGF + P+SA R L++ + + Y ++E
Sbjct: 360 EAAVGPSGGRWWRGIE---RWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQE 416
Query: 567 ELGLLHFGWEDKSLIVASAWK 587
G GW+ + L+ SAW+
Sbjct: 417 ARGACFLGWQTRPLLSVSAWQ 437
Score = 193 (73.0 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 75/269 (27%), Positives = 121/269 (44%)
Query: 213 SPRTLKQLLIDCAATLSDGNIEEATTIIN-ELRQMVSIQGDPPQRIAAYMVEGLAARMAA 271
+P T + LL+ CA L G++ A L S +GD R+A + LA R+ A
Sbjct: 47 APST-RDLLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDA 105
Query: 272 SGKFLYKALK--CKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIID 329
+ + P SS A ++ P +F + AN AI+EA G +RVHI+D
Sbjct: 106 KAGHGHVVVGGGAARPASSGAYLAFN---QIAPFLRFAHLTANQAILEAVDGARRVHILD 162
Query: 330 FDINQGSQYITLIQTIASL--PG-NRPHLRLTGVD-DPESVQRLVGGLQIIGLRLESLAE 385
D G Q+ L+Q IA P P +R+TG D +++ R G RL + A
Sbjct: 163 LDAVHGVQWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLRT-------GNRLRAFAR 215
Query: 386 ALGVPFEFHAVPSKTSLVTPSMLE-CRPGEALVVNFAFQ---LHHMPDESVST------- 434
++ +PF F + + P + G A + A L PDE+++
Sbjct: 216 SIHLPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLH 275
Query: 435 -VNQRDQL---LRMVKSLNPKLVTVVEQD 459
+ D+L L+ VK+++P +VT+ E++
Sbjct: 276 NLAGHDELAAFLKWVKAMSPAVVTIAERE 304
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 180 (68.4 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 518 ERIERYELAGKWRARMTMAGFTSCPMSADVTDMIRKLIKQYCDRYKLKEELGLLHFGWED 577
ER+ER+EL GKW+ R TMAGF P+S+ V +I+ L++ Y + Y L E+ G + GW+
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRCYSEHYTLVEKDGAMLLGWKK 61
Query: 578 KSLIVASAW 586
++LI ASAW
Sbjct: 62 RNLISASAW 70
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 201 (75.8 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 89/378 (23%), Positives = 158/378 (41%)
Query: 221 LIDCAATLSDGNIEEATTIINELRQMVSIQ-GDPPQRIAAYMVEGLAARMAASGKFLYKA 279
++DC SD + A ++++L Q + G P QR A Y E L + + + + +
Sbjct: 106 VVDCIE--SD-ELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNR--NQL 160
Query: 280 LKCKEPPSSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKR---VHIIDFDINQGS 336
+ ++ A++ + P F AN AI+++ + VH++DF+I G
Sbjct: 161 FSWSD--IVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGG 218
Query: 337 QYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAV 396
QY +L++ IA N LR+T V + +++ L A + + F+ V
Sbjct: 219 QYASLMREIAEKSANGGFLRVTAVVAEDCAVET----RLVKENLTQFAAEMKIRFQIEFV 274
Query: 397 PSKT-SLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTV 455
KT +++ + GE VV + + VN ++ +P +V
Sbjct: 275 LMKTFEILSFKAIRFVDGERTVVLISPAIFRRVIGIAEFVNNLGRV-------SPNVVVF 327
Query: 456 VEQDMNTNT--SPFFPR-FIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNII 512
V+ + T T S F R F+ A+ +Y++V ESLDA P + VE L I +
Sbjct: 328 VDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKISAAV 387
Query: 513 ACEGEERIERYELAGK--WRARMTMAGFTSCPMSADVTDMIRKLIKQYCDR-YKLKEELG 569
R AG+ WR + AG +S L+++ R + + + G
Sbjct: 388 ETAANRRS-----AGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQG 442
Query: 570 LLHFGWEDKSLIVASAWK 587
L W ++L+ SAW+
Sbjct: 443 ELVLCWHGRALVATSAWR 460
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 587 554 0.00098 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 621 (66 KB)
Total size of DFA: 310 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.17u 0.07s 45.24t Elapsed: 00:00:03
Total cpu time: 45.18u 0.07s 45.25t Elapsed: 00:00:03
Start: Fri May 10 23:40:00 2013 End: Fri May 10 23:40:03 2013