Query 007853
Match_columns 587
No_of_seqs 215 out of 678
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 12:07:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.3 0.0015 5.1E-08 65.2 12.5 107 324-458 71-179 (261)
2 3dtn_A Putative methyltransfer 96.2 0.015 5.3E-07 55.1 8.9 112 313-456 33-146 (234)
3 3bkx_A SAM-dependent methyltra 96.1 0.13 4.5E-06 49.9 15.5 127 314-462 34-164 (275)
4 3dh0_A SAM dependent methyltra 96.0 0.16 5.5E-06 47.4 14.8 113 313-456 27-141 (219)
5 3dp7_A SAM-dependent methyltra 95.9 0.05 1.7E-06 56.2 11.8 115 314-458 170-288 (363)
6 1vl5_A Unknown conserved prote 95.5 0.2 7E-06 48.3 13.9 109 314-456 28-138 (260)
7 4a6d_A Hydroxyindole O-methylt 95.2 0.096 3.3E-06 54.1 11.0 160 312-543 168-331 (353)
8 3mcz_A O-methyltransferase; ad 94.8 0.37 1.3E-05 48.8 13.9 115 314-458 169-288 (352)
9 2r3s_A Uncharacterized protein 94.6 0.53 1.8E-05 47.1 14.5 115 313-459 153-273 (335)
10 3mgg_A Methyltransferase; NYSG 94.6 0.36 1.2E-05 46.8 12.7 104 323-458 37-143 (276)
11 3gwz_A MMCR; methyltransferase 94.5 0.33 1.1E-05 50.2 12.9 113 313-458 192-308 (369)
12 3i53_A O-methyltransferase; CO 94.2 0.25 8.7E-06 49.8 11.1 111 315-458 161-275 (332)
13 3dlc_A Putative S-adenosyl-L-m 93.9 0.37 1.3E-05 44.3 10.8 112 312-457 33-147 (219)
14 1xxl_A YCGJ protein; structura 93.9 0.91 3.1E-05 43.3 13.8 110 313-456 11-122 (239)
15 3htx_A HEN1; HEN1, small RNA m 93.8 0.28 9.6E-06 57.2 11.6 121 315-459 713-836 (950)
16 2aot_A HMT, histamine N-methyl 93.6 0.51 1.8E-05 46.7 11.8 113 322-454 51-168 (292)
17 2ip2_A Probable phenazine-spec 93.6 0.56 1.9E-05 47.2 12.1 115 313-459 158-274 (334)
18 3lst_A CALO1 methyltransferase 93.5 0.32 1.1E-05 49.7 10.2 110 313-458 174-287 (348)
19 1qzz_A RDMB, aclacinomycin-10- 93.3 0.67 2.3E-05 47.3 12.3 113 313-458 172-288 (374)
20 3ujc_A Phosphoethanolamine N-m 92.3 1.2 4E-05 42.5 11.9 122 302-455 34-156 (266)
21 1x19_A CRTF-related protein; m 92.2 0.94 3.2E-05 46.2 11.7 115 312-459 179-297 (359)
22 3f4k_A Putative methyltransfer 92.1 1.6 5.3E-05 41.6 12.5 117 306-456 28-148 (257)
23 3jwh_A HEN1; methyltransferase 91.9 0.79 2.7E-05 42.8 9.9 114 315-458 21-141 (217)
24 3gu3_A Methyltransferase; alph 91.9 3.5 0.00012 40.4 15.0 105 322-458 21-127 (284)
25 1tw3_A COMT, carminomycin 4-O- 91.9 1.8 6E-05 44.0 13.2 114 313-459 173-290 (360)
26 3m70_A Tellurite resistance pr 91.8 1.1 3.7E-05 43.8 11.2 111 313-456 110-221 (286)
27 3h2b_A SAM-dependent methyltra 91.5 0.98 3.3E-05 41.5 10.0 98 324-457 42-140 (203)
28 3sm3_A SAM-dependent methyltra 91.4 0.93 3.2E-05 42.2 9.9 104 324-456 31-139 (235)
29 3jwg_A HEN1, methyltransferase 91.4 0.71 2.4E-05 43.1 9.0 117 313-459 19-142 (219)
30 3hnr_A Probable methyltransfer 91.0 0.75 2.6E-05 42.8 8.7 43 313-364 35-77 (220)
31 3reo_A (ISO)eugenol O-methyltr 90.8 0.63 2.2E-05 48.1 8.7 108 313-459 192-302 (368)
32 3p9c_A Caffeic acid O-methyltr 90.7 0.66 2.3E-05 48.0 8.7 108 313-459 190-300 (364)
33 2o57_A Putative sarcosine dime 90.1 2.7 9.3E-05 41.1 12.3 113 313-458 68-188 (297)
34 3l8d_A Methyltransferase; stru 90.1 2.2 7.7E-05 40.0 11.3 97 323-457 53-152 (242)
35 1kpg_A CFA synthase;, cyclopro 90.0 1.3 4.4E-05 43.2 9.7 110 314-455 55-165 (287)
36 3vc1_A Geranyl diphosphate 2-C 89.8 3.1 0.0001 41.4 12.5 109 313-455 106-218 (312)
37 3kkz_A Uncharacterized protein 89.3 4.8 0.00017 38.7 13.2 125 298-456 20-148 (267)
38 3bus_A REBM, methyltransferase 88.8 2.5 8.7E-05 40.6 10.8 110 313-455 51-163 (273)
39 1nkv_A Hypothetical protein YJ 88.8 2.5 8.6E-05 40.1 10.6 110 313-456 26-138 (256)
40 3hem_A Cyclopropane-fatty-acyl 88.2 3.5 0.00012 40.7 11.5 118 313-456 62-181 (302)
41 4fsd_A Arsenic methyltransfera 88.1 5.9 0.0002 40.9 13.7 112 323-456 83-201 (383)
42 3ege_A Putative methyltransfer 87.4 1.4 4.7E-05 42.7 7.9 43 313-364 24-66 (261)
43 4htf_A S-adenosylmethionine-de 86.9 3 0.0001 40.6 10.0 111 315-457 61-172 (285)
44 1xtp_A LMAJ004091AAA; SGPP, st 86.6 2.3 7.8E-05 40.3 8.8 113 313-457 83-196 (254)
45 1fp1_D Isoliquiritigenin 2'-O- 86.2 1.3 4.6E-05 45.4 7.4 107 313-458 198-307 (372)
46 3ou2_A SAM-dependent methyltra 86.0 3.1 0.00011 38.2 9.2 109 312-457 34-146 (218)
47 2xvm_A Tellurite resistance pr 86.0 6.7 0.00023 35.3 11.3 110 312-454 21-132 (199)
48 3e23_A Uncharacterized protein 85.6 2.6 8.9E-05 38.9 8.5 96 324-457 44-140 (211)
49 3ofk_A Nodulation protein S; N 85.4 6.7 0.00023 36.2 11.2 110 315-457 43-153 (216)
50 3ocj_A Putative exported prote 84.9 5.8 0.0002 39.2 11.2 106 323-457 118-226 (305)
51 3lcc_A Putative methyl chlorid 84.5 7.1 0.00024 36.6 11.1 101 325-456 68-169 (235)
52 2qe6_A Uncharacterized protein 84.4 6.1 0.00021 39.1 11.0 135 296-457 46-196 (274)
53 2vdw_A Vaccinia virus capping 84.1 4.2 0.00014 41.0 9.8 109 324-456 49-167 (302)
54 3g5l_A Putative S-adenosylmeth 83.9 6.9 0.00024 37.1 10.8 111 312-457 33-144 (253)
55 3lcv_B Sisomicin-gentamicin re 83.3 4.2 0.00014 41.5 9.2 123 287-456 112-234 (281)
56 2fk8_A Methoxy mycolic acid sy 83.1 7.4 0.00025 38.5 11.0 110 314-455 81-191 (318)
57 3mq2_A 16S rRNA methyltransfer 82.9 1.6 5.5E-05 40.7 5.7 116 315-457 19-139 (218)
58 2y1w_A Histone-arginine methyl 82.3 8.5 0.00029 39.3 11.4 115 313-457 40-154 (348)
59 3thr_A Glycine N-methyltransfe 82.2 1.6 5.4E-05 42.6 5.6 125 313-457 47-174 (293)
60 1fp2_A Isoflavone O-methyltran 82.0 6.5 0.00022 39.8 10.3 98 323-459 188-290 (352)
61 3r0q_C Probable protein argini 81.7 7 0.00024 40.5 10.6 115 313-457 53-168 (376)
62 4e2x_A TCAB9; kijanose, tetron 81.6 2.4 8.4E-05 44.0 7.1 109 314-457 98-207 (416)
63 3g5t_A Trans-aconitate 3-methy 81.5 7.5 0.00026 38.2 10.3 108 322-456 35-147 (299)
64 3ccf_A Cyclopropane-fatty-acyl 80.9 10 0.00034 36.7 10.9 105 314-457 48-153 (279)
65 3bkw_A MLL3908 protein, S-aden 80.8 11 0.00038 35.1 10.8 109 313-456 33-142 (243)
66 1ve3_A Hypothetical protein PH 80.5 12 0.0004 34.5 10.8 101 324-456 39-140 (227)
67 2p7i_A Hypothetical protein; p 79.7 8.8 0.0003 35.6 9.7 94 325-456 44-139 (250)
68 3giw_A Protein of unknown func 79.3 8.4 0.00029 39.1 9.9 143 293-457 44-200 (277)
69 1y8c_A S-adenosylmethionine-de 78.4 6.9 0.00024 36.4 8.5 103 323-457 37-141 (246)
70 1zg3_A Isoflavanone 4'-O-methy 76.8 6.7 0.00023 39.9 8.4 107 314-459 182-295 (358)
71 3fzg_A 16S rRNA methylase; met 76.7 2.7 9.3E-05 40.8 5.1 101 326-458 52-152 (200)
72 3cgg_A SAM-dependent methyltra 76.4 25 0.00085 31.1 11.3 40 314-363 38-77 (195)
73 3i9f_A Putative type 11 methyl 75.7 11 0.00038 33.2 8.7 101 315-456 9-110 (170)
74 2yqz_A Hypothetical protein TT 75.3 19 0.00064 34.0 10.7 101 323-457 39-140 (263)
75 3g2m_A PCZA361.24; SAM-depende 74.9 5.4 0.00018 39.2 6.9 111 313-457 73-189 (299)
76 3frh_A 16S rRNA methylase; met 74.4 4.4 0.00015 40.7 6.1 180 215-457 24-205 (253)
77 3bgv_A MRNA CAP guanine-N7 met 74.3 18 0.00063 35.6 10.8 116 323-457 34-154 (313)
78 2gb4_A Thiopurine S-methyltran 74.0 21 0.00071 34.8 10.9 33 323-364 68-100 (252)
79 3cc8_A Putative methyltransfer 72.7 30 0.001 31.5 11.2 106 312-456 22-128 (230)
80 2p35_A Trans-aconitate 2-methy 72.7 13 0.00043 35.1 8.8 107 314-457 24-131 (259)
81 3q7e_A Protein arginine N-meth 72.4 17 0.0006 37.0 10.3 106 323-457 66-172 (349)
82 1wzn_A SAM-dependent methyltra 69.8 41 0.0014 31.5 11.6 110 316-458 34-145 (252)
83 2fyt_A Protein arginine N-meth 69.8 22 0.00077 36.1 10.4 113 313-455 54-168 (340)
84 3u81_A Catechol O-methyltransf 69.6 17 0.00059 33.9 8.8 107 324-458 59-170 (221)
85 2p8j_A S-adenosylmethionine-de 69.2 29 0.00098 31.4 10.1 103 324-457 24-127 (209)
86 1dus_A MJ0882; hypothetical pr 69.0 21 0.00072 31.5 8.9 112 312-457 41-156 (194)
87 3uwp_A Histone-lysine N-methyl 68.7 13 0.00044 40.2 8.5 120 313-456 163-286 (438)
88 1g6q_1 HnRNP arginine N-methyl 68.5 35 0.0012 34.3 11.5 114 314-456 29-143 (328)
89 2zfu_A Nucleomethylin, cerebra 68.3 12 0.0004 34.5 7.3 38 315-364 58-96 (215)
90 1pjz_A Thiopurine S-methyltran 67.8 13 0.00044 34.6 7.5 33 323-364 22-54 (203)
91 3p9n_A Possible methyltransfer 67.7 14 0.00047 33.5 7.5 110 323-462 44-157 (189)
92 2ex4_A Adrenal gland protein A 67.0 25 0.00085 33.0 9.4 103 323-456 79-183 (241)
93 3b3j_A Histone-arginine methyl 66.9 14 0.00049 39.8 8.6 115 313-457 148-262 (480)
94 1vlm_A SAM-dependent methyltra 66.1 48 0.0016 30.6 11.1 21 524-544 166-186 (219)
95 3pfg_A N-methyltransferase; N, 65.3 14 0.00047 35.3 7.3 98 324-457 51-150 (263)
96 3iv6_A Putative Zn-dependent a 64.2 7.9 0.00027 38.6 5.5 43 313-364 35-77 (261)
97 2yxd_A Probable cobalt-precorr 64.1 24 0.00082 30.9 8.2 102 315-456 27-129 (183)
98 3d2l_A SAM-dependent methyltra 63.5 52 0.0018 30.4 10.9 108 315-457 27-136 (243)
99 3hm2_A Precorrin-6Y C5,15-meth 63.2 51 0.0018 28.8 10.3 45 313-364 15-59 (178)
100 3e8s_A Putative SAM dependent 58.7 29 0.00098 31.6 8.0 45 310-363 39-83 (227)
101 1ri5_A MRNA capping enzyme; me 57.5 70 0.0024 30.5 10.9 109 323-457 64-173 (298)
102 3lbf_A Protein-L-isoaspartate 57.0 53 0.0018 29.9 9.5 41 315-364 69-109 (210)
103 3g07_A 7SK snRNA methylphospha 57.0 9.2 0.00031 37.8 4.5 35 323-364 46-80 (292)
104 3e05_A Precorrin-6Y C5,15-meth 55.0 77 0.0026 28.7 10.2 44 314-364 31-74 (204)
105 4hc4_A Protein arginine N-meth 55.0 49 0.0017 34.6 9.9 100 326-455 86-186 (376)
106 3eey_A Putative rRNA methylase 54.7 52 0.0018 29.6 8.9 34 325-364 24-57 (197)
107 3dxy_A TRNA (guanine-N(7)-)-me 53.7 15 0.00052 34.8 5.3 113 323-458 34-150 (218)
108 1wy7_A Hypothetical protein PH 52.7 72 0.0025 28.9 9.6 74 323-422 49-122 (207)
109 2gs9_A Hypothetical protein TT 51.9 36 0.0012 31.0 7.4 101 315-456 29-130 (211)
110 2kw5_A SLR1183 protein; struct 51.9 1.3E+02 0.0045 26.9 12.4 98 326-457 32-130 (202)
111 3njr_A Precorrin-6Y methylase; 49.7 1E+02 0.0034 28.5 10.2 62 314-394 46-109 (204)
112 3b5i_A S-adenosyl-L-methionine 49.5 78 0.0027 33.1 10.3 44 323-366 52-103 (374)
113 1yzh_A TRNA (guanine-N(7)-)-me 48.7 85 0.0029 28.8 9.5 110 323-458 41-156 (214)
114 2g72_A Phenylethanolamine N-me 48.3 58 0.002 31.5 8.6 21 524-544 234-254 (289)
115 1jsx_A Glucose-inhibited divis 48.0 59 0.002 29.4 8.2 96 325-457 67-164 (207)
116 3ftd_A Dimethyladenosine trans 47.3 43 0.0015 32.7 7.5 109 314-459 22-132 (249)
117 4dcm_A Ribosomal RNA large sub 45.9 48 0.0016 34.4 8.0 120 310-457 209-333 (375)
118 2yxe_A Protein-L-isoaspartate 45.8 93 0.0032 28.3 9.3 45 314-364 68-112 (215)
119 2b3t_A Protein methyltransfera 45.5 74 0.0025 30.7 8.9 113 323-457 109-237 (276)
120 3ggd_A SAM-dependent methyltra 45.1 16 0.00054 34.3 3.9 105 324-458 57-164 (245)
121 1zq9_A Probable dimethyladenos 43.9 83 0.0029 31.0 9.1 42 313-363 18-59 (285)
122 3grz_A L11 mtase, ribosomal pr 43.5 56 0.0019 29.6 7.3 48 309-364 44-93 (205)
123 4azs_A Methyltransferase WBDD; 43.1 21 0.00072 39.0 5.0 84 323-430 66-150 (569)
124 4hg2_A Methyltransferase type 41.7 98 0.0034 30.1 9.1 92 326-457 42-135 (257)
125 3g89_A Ribosomal RNA small sub 41.4 40 0.0014 32.6 6.2 62 322-402 79-141 (249)
126 2h1r_A Dimethyladenosine trans 41.2 90 0.0031 31.0 8.9 42 313-363 32-73 (299)
127 3mti_A RRNA methylase; SAM-dep 40.9 86 0.0029 27.8 8.0 31 325-364 24-54 (185)
128 1nv8_A HEMK protein; class I a 39.9 1.3E+02 0.0044 29.6 9.8 112 325-458 125-249 (284)
129 3tfw_A Putative O-methyltransf 39.6 66 0.0023 30.7 7.4 56 324-395 64-121 (248)
130 1dl5_A Protein-L-isoaspartate 39.3 1.1E+02 0.0038 30.3 9.3 46 313-364 65-110 (317)
131 3bxo_A N,N-dimethyltransferase 38.5 2.3E+02 0.0078 25.8 12.4 100 322-457 39-140 (239)
132 3p2e_A 16S rRNA methylase; met 38.4 57 0.002 30.9 6.7 34 323-363 24-57 (225)
133 1uwv_A 23S rRNA (uracil-5-)-me 38.3 1.6E+02 0.0055 30.8 10.7 108 316-457 279-388 (433)
134 2jjq_A Uncharacterized RNA met 37.4 2.8E+02 0.0095 29.1 12.4 95 325-457 292-386 (425)
135 3dli_A Methyltransferase; PSI- 37.3 26 0.00089 32.9 4.0 31 324-363 42-72 (240)
136 2fpo_A Methylase YHHF; structu 37.3 32 0.0011 31.8 4.6 102 325-459 56-161 (202)
137 2gpy_A O-methyltransferase; st 37.3 1.1E+02 0.0037 28.4 8.4 33 325-364 56-88 (233)
138 2avn_A Ubiquinone/menaquinone 36.8 2.5E+02 0.0087 26.3 11.1 33 323-364 54-86 (260)
139 1af7_A Chemotaxis receptor met 35.0 2.2E+02 0.0074 28.2 10.5 43 323-365 105-148 (274)
140 3id6_C Fibrillarin-like rRNA/T 34.7 2.5E+02 0.0085 27.1 10.7 44 314-363 64-110 (232)
141 3fut_A Dimethyladenosine trans 33.7 64 0.0022 32.1 6.4 54 301-364 20-78 (271)
142 1zx0_A Guanidinoacetate N-meth 30.9 2.1E+02 0.0073 26.5 9.3 34 323-364 60-93 (236)
143 2fca_A TRNA (guanine-N(7)-)-me 28.7 1.5E+02 0.0051 27.4 7.7 35 323-364 38-72 (213)
144 2j66_A BTRK, decarboxylase; bu 28.4 1.4E+02 0.0047 31.0 8.1 69 323-395 133-224 (428)
145 2nxc_A L11 mtase, ribosomal pr 26.4 1.3E+02 0.0044 28.9 7.0 32 324-364 121-152 (254)
146 1vbf_A 231AA long hypothetical 26.2 1.6E+02 0.0055 27.0 7.4 41 314-363 61-101 (231)
147 3lpm_A Putative methyltransfer 26.2 2.8E+02 0.0096 26.2 9.4 116 323-457 49-175 (259)
148 1l3i_A Precorrin-6Y methyltran 26.1 1.8E+02 0.0062 25.2 7.4 41 315-364 25-65 (192)
149 3mb5_A SAM-dependent methyltra 26.1 1.5E+02 0.0052 27.7 7.3 45 314-364 84-128 (255)
150 3m33_A Uncharacterized protein 26.0 1.3E+02 0.0046 27.7 6.9 32 324-364 49-80 (226)
151 3bzb_A Uncharacterized protein 25.9 2.8E+02 0.0096 26.8 9.5 30 325-362 81-110 (281)
152 2i62_A Nicotinamide N-methyltr 25.5 2.1E+02 0.0072 26.5 8.2 36 321-364 54-89 (265)
153 1u2z_A Histone-lysine N-methyl 25.2 2.2E+02 0.0076 30.3 9.1 117 314-457 233-358 (433)
154 2pjd_A Ribosomal RNA small sub 25.0 86 0.003 31.5 5.7 118 311-457 184-302 (343)
155 2qn6_B Translation initiation 24.4 68 0.0023 27.2 4.0 43 350-394 49-91 (93)
156 1ws6_A Methyltransferase; stru 24.3 1.2E+02 0.0042 26.0 5.9 32 324-364 42-73 (171)
157 1ixk_A Methyltransferase; open 23.4 2.9E+02 0.0099 27.4 9.2 64 311-390 106-169 (315)
158 3tma_A Methyltransferase; thum 23.4 1.5E+02 0.0051 29.8 7.1 115 315-451 195-310 (354)
159 2esr_A Methyltransferase; stru 23.0 1.8E+02 0.0063 25.3 6.9 104 324-460 32-140 (177)
160 1jg1_A PIMT;, protein-L-isoasp 23.0 2.8E+02 0.0097 25.6 8.5 42 314-363 82-123 (235)
161 1o54_A SAM-dependent O-methylt 22.8 1.8E+02 0.0062 27.8 7.3 44 314-363 103-146 (277)
162 2ipx_A RRNA 2'-O-methyltransfe 22.3 3.1E+02 0.011 25.2 8.7 34 324-363 78-111 (233)
163 2ift_A Putative methylase HI07 22.1 1.2E+02 0.004 27.8 5.6 105 325-461 55-166 (201)
164 2uyo_A Hypothetical protein ML 22.1 1.2E+02 0.0041 30.7 6.0 107 326-458 105-218 (310)
165 3tr6_A O-methyltransferase; ce 21.9 1.9E+02 0.0064 26.4 6.9 55 325-395 66-122 (225)
166 2vdv_E TRNA (guanine-N(7)-)-me 21.8 4E+02 0.014 24.8 9.5 35 323-364 49-83 (246)
167 3dr5_A Putative O-methyltransf 20.9 1.3E+02 0.0044 28.3 5.7 55 320-390 53-107 (221)
168 2avd_A Catechol-O-methyltransf 20.8 1.7E+02 0.0058 26.8 6.4 35 324-364 70-104 (229)
169 1o9g_A RRNA methyltransferase; 20.8 1.2E+02 0.004 28.6 5.4 45 315-364 43-87 (250)
170 3a27_A TYW2, uncharacterized p 20.6 3.8E+02 0.013 25.8 9.2 95 326-456 122-217 (272)
171 3fpf_A Mtnas, putative unchara 20.1 4.1E+02 0.014 26.9 9.5 35 323-364 122-156 (298)
172 4dzr_A Protein-(glutamine-N5) 20.1 85 0.0029 28.1 4.0 43 315-364 21-64 (215)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.35 E-value=0.0015 Score=65.22 Aligned_cols=107 Identities=14% Similarity=0.268 Sum_probs=63.1
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-+|+|+|.|.|. +...|+.+- ++|..+||||+.... .|+...+++ +..+..-....+..+..++
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s~~------ml~~A~~~~----~~~~~~~~v~~~~~D~~~~ 135 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNSPA------MIERCRRHI----DAYKAPTPVDVIEGDIRDI 135 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESCHH------HHHHHHHHH----HTSCCSSCEEEEESCTTTC
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECCHH------HHHHHHHHH----HhhccCceEEEeecccccc
Confidence 4579999999984 445566553 346789999997532 344444443 3344433333344444443
Q ss_pred CCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEE-EEEec
Q 007853 404 TPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLV-TVVEQ 458 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVV-tlvEq 458 (587)
..+ +-.+ |-+.+.|||+++ ..|..+|+.| |.|+|.-+ ++.|.
T Consensus 136 ~~~-----~~d~--v~~~~~l~~~~~------~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 136 AIE-----NASM--VVLNFTLQFLEP------SERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp CCC-----SEEE--EEEESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccc-----cccc--ceeeeeeeecCc------hhHhHHHHHHHHHcCCCcEEEEEec
Confidence 322 2223 334567899975 2466788877 66999854 45554
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.17 E-value=0.015 Score=55.14 Aligned_cols=112 Identities=19% Similarity=0.195 Sum_probs=62.4
Q ss_pred HHHHhhhc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCce
Q 007853 313 GAIIEAFK-GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391 (587)
Q Consensus 313 qAILEA~~-g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpF 391 (587)
+.+++.+. ..+...|+|+|.|.|.- ...|+.+. |..++|||+.... .++.+.++ ++..+ ..
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~~~v~~vD~s~~------~~~~a~~~----~~~~~-~~ 94 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLL----SAFLMEKY---PEATFTLVDMSEK------MLEIAKNR----FRGNL-KV 94 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHH----HHHHHHHC---TTCEEEEEESCHH------HHHHHHHH----TCSCT-TE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHH----HHHHHHhC---CCCeEEEEECCHH------HHHHHHHh----hccCC-CE
Confidence 55666665 44568999999999853 33444432 4579999996432 12323222 22222 33
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
+| +..+..++... +..=+|-|...|||+++. .+..+|+.+ +.|+|.-++++
T Consensus 95 ~~--~~~d~~~~~~~------~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 95 KY--IEADYSKYDFE------EKYDMVVSALSIHHLEDE------DKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp EE--EESCTTTCCCC------SCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred EE--EeCchhccCCC------CCceEEEEeCccccCCHH------HHHHHHHHHHHhcCCCcEEEE
Confidence 33 34444443322 333355556789999652 234566665 56899855443
No 3
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.12 E-value=0.13 Score=49.87 Aligned_cols=127 Identities=18% Similarity=0.107 Sum_probs=66.6
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--e
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--F 391 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--F 391 (587)
.|++.+.-.+.-+|+|+|.|.|.--. .|+.+- .|..++|||+...........++.+.++ ++..|++ .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~----~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~----~~~~~~~~~v 103 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSA----VLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNH----LLAGPLGDRL 103 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHH----HHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHH----HHTSTTGGGE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHH----HHHHHh--CCCCEEEEEECCccccccHHHHHHHHHH----HHhcCCCCce
Confidence 45666554555689999999885433 333331 2446999999754200000123434333 3344543 4
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCC--cEEEEEeccCCC
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNP--KLVTVVEQDMNT 462 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~P--kVVtlvEqEan~ 462 (587)
+|.. .+ ++....+...++..=+|-|...|||+++. +.+++.++.|.| ..+++++.....
T Consensus 104 ~~~~--~d--~~~~~~~~~~~~~fD~v~~~~~l~~~~~~--------~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 104 TVHF--NT--NLSDDLGPIADQHFDRVVLAHSLWYFASA--------NALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp EEEC--SC--CTTTCCGGGTTCCCSEEEEESCGGGSSCH--------HHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred EEEE--CC--hhhhccCCCCCCCEEEEEEccchhhCCCH--------HHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 4433 22 11112222222322133355677998762 348888888887 466677655443
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.97 E-value=0.16 Score=47.41 Aligned_cols=113 Identities=13% Similarity=0.194 Sum_probs=65.0
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-e
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-F 391 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-F 391 (587)
..|++.+.-.+.-.|+|+|.|.|.--..|.+.. +|..++|||+.... .++.+.+ .++..|++ +
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~------~~~~a~~----~~~~~~~~~~ 90 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEE------MVNYAWE----KVNKLGLKNV 90 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHH------HHHHHHH----HHHHHTCTTE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHH------HHHHHHH----HHHHcCCCcE
Confidence 556666655566689999999986544444443 35569999996432 2333333 34455665 4
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
+|.. .+..++. ...+..=+|-+...|||+++ ...+|+.+ +.|+|.-++++
T Consensus 91 ~~~~--~d~~~~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 91 EVLK--SEENKIP-----LPDNTVDFIFMAFTFHELSE--------PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EEEE--CBTTBCS-----SCSSCEEEEEEESCGGGCSS--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEEe--cccccCC-----CCCCCeeEEEeehhhhhcCC--------HHHHHHHHHHHhCCCeEEEE
Confidence 4433 3333221 22333445556677899854 23555554 67899755443
No 5
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.88 E-value=0.05 Score=56.22 Aligned_cols=115 Identities=17% Similarity=0.170 Sum_probs=62.6
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--e
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--F 391 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--F 391 (587)
.+++.+.....-+|+|+|.|.|. +...|+++- |.+++|+++.|. .++... +.++..|++ .
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~----~~~~~~~~~~~v 231 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLPQ-------QLEMMR----KQTAGLSGSERI 231 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECHH-------HHHHHH----HHHTTCTTGGGE
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCHH-------HHHHHH----HHHHhcCcccce
Confidence 34555444456799999999985 344454442 567999999622 123333 334445653 5
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEec
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQ 458 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEq 458 (587)
+|.. .+..+... .+. ..-++ |-+...||+++|+ ....+|+.+ +.|+|.- ++++|.
T Consensus 232 ~~~~--~d~~~~~~-~~p-~~~D~--v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 232 HGHG--ANLLDRDV-PFP-TGFDA--VWMSQFLDCFSEE------EVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp EEEE--CCCCSSSC-CCC-CCCSE--EEEESCSTTSCHH------HHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEE--ccccccCC-CCC-CCcCE--EEEechhhhCCHH------HHHHHHHHHHHhcCCCcEEEEEee
Confidence 5544 33222110 011 11233 3455578998763 234677766 5689974 445564
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.51 E-value=0.2 Score=48.26 Aligned_cols=109 Identities=13% Similarity=0.231 Sum_probs=62.3
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FE 392 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-Fe 392 (587)
.|++.+...+.-+|+|+|.|.|. +...|+.+. + ++|||+.... .++... +.++..|++ ++
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~------~l~~a~----~~~~~~~~~~v~ 88 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTED------ILKVAR----AFIEGNGHQQVE 88 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHH------HHHHHH----HHHHHTTCCSEE
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHH------HHHHHH----HHHHhcCCCceE
Confidence 34445544455689999999885 555666653 2 9999986432 233333 334455665 44
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHH-HHHhcCCcEEEEE
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLR-MVKSLNPKLVTVV 456 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~-~Vr~L~PkVVtlv 456 (587)
|. ..+.+++ ...++..=+|-|.+.|||++| + ..+|+ ..+-|+|.-.+++
T Consensus 89 ~~--~~d~~~l-----~~~~~~fD~V~~~~~l~~~~d-------~-~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 89 YV--QGDAEQM-----PFTDERFHIVTCRIAAHHFPN-------P-ASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp EE--ECCC-CC-----CSCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred EE--EecHHhC-----CCCCCCEEEEEEhhhhHhcCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 43 3333332 222333335556678999975 2 34555 4467899855443
No 7
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=95.20 E-value=0.096 Score=54.10 Aligned_cols=160 Identities=19% Similarity=0.292 Sum_probs=88.7
Q ss_pred hHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC-c
Q 007853 312 NGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV-P 390 (587)
Q Consensus 312 NqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv-p 390 (587)
...|++++.-...-+|||+|-|.|. ++.+|+++. |.+|+|..+.|.. ++.+.+++ +.-+. .
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~v-------~~~a~~~~----~~~~~~r 229 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPEV-------VWTAKQHF----SFQEEEQ 229 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHHH-------HHHHHHHS----CC--CCS
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHHH-------HHHHHHhh----hhcccCc
Confidence 4567777655555689999999995 555666653 7889998886532 22222222 11111 2
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCc-EEEEEeccCCCC-CCCc
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPK-LVTVVEQDMNTN-TSPF 467 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~Pk-VVtlvEqEan~N-s~~F 467 (587)
.+|.+ .+.-+ . .....+ +|-+...||+.+|+. ...+|+.+ +.|+|. .++|+|.-.+.+ ..+.
T Consensus 230 v~~~~--gD~~~---~--~~~~~D--~~~~~~vlh~~~d~~------~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~ 294 (353)
T 4a6d_A 230 IDFQE--GDFFK---D--PLPEAD--LYILARVLHDWADGK------CSHLLERIYHTCKPGGGILVIESLLDEDRRGPL 294 (353)
T ss_dssp EEEEE--SCTTT---S--CCCCCS--EEEEESSGGGSCHHH------HHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH
T ss_pred eeeec--Ccccc---C--CCCCce--EEEeeeecccCCHHH------HHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH
Confidence 44443 22111 1 111223 344456789998742 24677766 579997 455667543322 1221
Q ss_pred hHHHHHHHhHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhhhhhhccCcchhhhhhhhhhHHHHHHhCCCccccC
Q 007853 468 FPRFIEAYNYYSVVFESLDATLPRESQDRMNVERQCLARDIVNIIACEGEERIERYELAGKWRARMTMAGFTSCPM 543 (587)
Q Consensus 468 ~~RF~EAL~yYsAlFDSLda~lpr~s~eR~~vE~~~lgreI~NiVAcEG~eRvER~E~~~~Wr~Rm~~AGF~~vpl 543 (587)
.. ++|| |.=.+.+.|.+| +.++|++.++.|||+.+.+
T Consensus 295 ~~----------~~~d------------------------l~ml~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 295 LT----------QLYS------------------------LNMLVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp HH----------HHHH------------------------HHHHHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred HH----------HHHH------------------------HHHHHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 11 1111 111234567666 4579999999999987754
No 8
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=94.76 E-value=0.37 Score=48.84 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=66.6
Q ss_pred HHHhhhccCC-eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--
Q 007853 314 AIIEAFKGEK-RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-- 390 (587)
Q Consensus 314 AILEA~~g~~-~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-- 390 (587)
.|++.+.-.+ ..+|+|+|-|.|. +...|+.+- |.+++|+++.|.. ++...+ .++..++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~~-------~~~a~~----~~~~~~~~~~ 230 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPTT-------RDAARK----TIHAHDLGGR 230 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGGG-------HHHHHH----HHHHTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHHH-------HHHHHH----HHHhcCCCCc
Confidence 5677765555 7899999999986 444454442 5589999987431 333333 33445653
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEE-EEEec
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLV-TVVEQ 458 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVV-tlvEq 458 (587)
.+|.. .+..+... ..++.+=+|-|...|||++|+ ....+|+.+ +.|+|.-. +++|.
T Consensus 231 v~~~~--~d~~~~~~----~~~~~~D~v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (352)
T 3mcz_A 231 VEFFE--KNLLDARN----FEGGAADVVMLNDCLHYFDAR------EAREVIGHAAGLVKPGGALLILTM 288 (352)
T ss_dssp EEEEE--CCTTCGGG----GTTCCEEEEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eEEEe--CCcccCcc----cCCCCccEEEEecccccCCHH------HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 55543 33222110 012224455566789999763 235677766 56899754 45554
No 9
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.63 E-value=0.53 Score=47.08 Aligned_cols=115 Identities=22% Similarity=0.226 Sum_probs=67.3
Q ss_pred HHHHhhhcc--CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc
Q 007853 313 GAIIEAFKG--EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390 (587)
Q Consensus 313 qAILEA~~g--~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp 390 (587)
..|++.+.. .+..+|+|+|-|.|. +...|+.+. |..++|+++.+ . .++...+++ +..|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~------~~~~a~~~~----~~~~~~ 214 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-S------VLEVAKENA----RIQGVA 214 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-H------HHHHHHHHH----HHHTCG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-H------HHHHHHHHH----HhcCCC
Confidence 356666655 667899999999984 444455442 45799999975 3 233344333 344554
Q ss_pred --eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEecc
Q 007853 391 --FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQD 459 (587)
Q Consensus 391 --FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEqE 459 (587)
.+|.. .+..+.. . ++..=+|-|...|||++++ ....+|+.+ +.|+|.- ++++|..
T Consensus 215 ~~v~~~~--~d~~~~~-----~-~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 215 SRYHTIA--GSAFEVD-----Y-GNDYDLVLLPNFLHHFDVA------TCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp GGEEEEE--SCTTTSC-----C-CSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cceEEEe--cccccCC-----C-CCCCcEEEEcchhccCCHH------HHHHHHHHHHHhCCCCcEEEEEeec
Confidence 55544 3332221 1 1224445566788998653 234566665 5689976 5666654
No 10
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.58 E-value=0.36 Score=46.83 Aligned_cols=104 Identities=17% Similarity=0.264 Sum_probs=59.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEEEEeeCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEFHAVPSKTS 401 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~V~~~~e 401 (587)
+.-+|+|+|.|.|. +...|+.+. |..++|||+.... .++ ...+.++..|++ .+|.. .+..
T Consensus 37 ~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~------~~~----~a~~~~~~~~~~~~~~~~--~d~~ 97 (276)
T 3mgg_A 37 PGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDISPE------SLE----KARENTEKNGIKNVKFLQ--ANIF 97 (276)
T ss_dssp TTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESCHH------HHH----HHHHHHHHTTCCSEEEEE--CCGG
T ss_pred CCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECCHH------HHH----HHHHHHHHcCCCCcEEEE--cccc
Confidence 45689999999884 334455442 3469999986432 122 233344555664 44433 3322
Q ss_pred CCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEE-EEec
Q 007853 402 LVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVT-VVEQ 458 (587)
Q Consensus 402 ~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVt-lvEq 458 (587)
++ ...++..=+|-+...|||++|. ..+|+.+ +-|+|.-++ +++.
T Consensus 98 ~~-----~~~~~~fD~v~~~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 98 SL-----PFEDSSFDHIFVCFVLEHLQSP--------EEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GC-----CSCTTCEEEEEEESCGGGCSCH--------HHHHHHHHHHEEEEEEEEEEEE
T ss_pred cC-----CCCCCCeeEEEEechhhhcCCH--------HHHHHHHHHHcCCCcEEEEEEc
Confidence 22 2223444456667789998762 3566655 568998554 4443
No 11
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.51 E-value=0.33 Score=50.18 Aligned_cols=113 Identities=19% Similarity=0.234 Sum_probs=64.2
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-- 390 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-- 390 (587)
..|++.+.-.+..+|+|+|-|.|. +...|+.+. |.+++|+++.|. .++...++ +...|+.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~----~~~~~l~~~ 253 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLERPP-------VAEEAREL----LTGRGLADR 253 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-------HHHHHHHH----HHHTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcCHH-------HHHHHHHh----hhhcCcCCc
Confidence 456777665667899999999995 444555442 568999998621 13333333 3344553
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCc-EEEEEec
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPK-LVTVVEQ 458 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~Pk-VVtlvEq 458 (587)
.+|.... ..+- +.. .-+ +|-|...||+.+|+ ....+|+.+ +.|+|. .++++|.
T Consensus 254 v~~~~~d--~~~~----~p~-~~D--~v~~~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 254 CEILPGD--FFET----IPD-GAD--VYLIKHVLHDWDDD------DVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EEEEECC--TTTC----CCS-SCS--EEEEESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred eEEeccC--CCCC----CCC-Cce--EEEhhhhhccCCHH------HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 5555432 2111 111 112 33445567988763 234677776 468886 4445554
No 12
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.23 E-value=0.25 Score=49.83 Aligned_cols=111 Identities=16% Similarity=0.094 Sum_probs=61.7
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--eE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--FE 392 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--Fe 392 (587)
|++.+.-.+..+|+|+|-|.| .+...|+.+- |.+++|+++.| . .++...++ ++..|+. .+
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~-~------~~~~a~~~----~~~~~~~~~v~ 222 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQ-G------PASAAHRR----FLDTGLSGRAQ 222 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-H------HHHHHHHH----HHHTTCTTTEE
T ss_pred HHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCH-H------HHHHHHHh----hhhcCcCcCeE
Confidence 444443344579999999999 4444555542 56799999762 1 23333333 3345553 56
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEec
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQ 458 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEq 458 (587)
|...... +.+ .. .-+ +|-|...|||++|+ ....+|+.+ +.|+|.- ++++|.
T Consensus 223 ~~~~d~~-~~~-----p~-~~D--~v~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 223 VVVGSFF-DPL-----PA-GAG--GYVLSAVLHDWDDL------SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEECCTT-SCC-----CC-SCS--EEEEESCGGGSCHH------HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred EecCCCC-CCC-----CC-CCc--EEEEehhhccCCHH------HHHHHHHHHHHhcCCCCEEEEEee
Confidence 6543211 111 11 112 34455678999763 235677766 5689974 445554
No 13
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=93.94 E-value=0.37 Score=44.35 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=65.4
Q ss_pred hHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-
Q 007853 312 NGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP- 390 (587)
Q Consensus 312 NqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp- 390 (587)
...|++.+..... +|+|+|.|.|. +...|+.+ |..++|||+.... .++.+ .+.++..|+.
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~------~~~~a----~~~~~~~~~~~ 93 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKH------MNEIA----LKNIADANLND 93 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHH------HHHHH----HHHHHHTTCTT
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHH------HHHHH----HHHHHhccccC
Confidence 3556666655555 99999999985 44555555 4579999986432 23333 3344555664
Q ss_pred -eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 391 -FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 391 -FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
++|.. .+..++. ..++..=+|-|...|||+++ ...+|+.+ +.|+|.-.+++.
T Consensus 94 ~~~~~~--~d~~~~~-----~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 94 RIQIVQ--GDVHNIP-----IEDNYADLIVSRGSVFFWED--------VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp TEEEEE--CBTTBCS-----SCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEE--cCHHHCC-----CCcccccEEEECchHhhccC--------HHHHHHHHHHhCCCCCEEEEE
Confidence 44433 3333322 22333335556667899854 24566554 668998665553
No 14
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=93.89 E-value=0.91 Score=43.31 Aligned_cols=110 Identities=15% Similarity=0.280 Sum_probs=62.5
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-e
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-F 391 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-F 391 (587)
.-+++.+.-.+.-+|+|+|.|.|. +...|+.+. + ++|||+.... .++.+. +.++..|++ +
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~------~~~~a~----~~~~~~~~~~v 71 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKE------MVEVAS----SFAQEKGVENV 71 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHH------HHHHHH----HHHHHHTCCSE
T ss_pred chHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHH------HHHHHH----HHHHHcCCCCe
Confidence 334555555666789999999885 444566552 2 8999986432 233333 334445654 4
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHH-HHhcCCcEEEEE
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRM-VKSLNPKLVTVV 456 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~-Vr~L~PkVVtlv 456 (587)
+|. ..+.+++ ...++..=+|-|...|||++| + ..+|+. .+-|+|.-.+++
T Consensus 72 ~~~--~~d~~~~-----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 72 RFQ--QGTAESL-----PFPDDSFDIITCRYAAHHFSD-------V-RKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EEE--ECBTTBC-----CSCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred EEE--ecccccC-----CCCCCcEEEEEECCchhhccC-------H-HHHHHHHHHHcCCCcEEEE
Confidence 443 3333332 223343445556678899865 2 345554 467899855443
No 15
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=93.83 E-value=0.28 Score=57.19 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=73.1
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHH--HHHcCCceE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESL--AEALGVPFE 392 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~f--A~~lgvpFe 392 (587)
|++.+...+.-.|+|+|.|.| .+...|+.+ ++|.-+||||+.... .++.+.++|... ++..|++ .
T Consensus 713 LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS~e------mLe~AReRLa~~lnAkr~gl~-n 779 (950)
T 3htx_A 713 ALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDISPK------GLARAAKMLHVKLNKEACNVK-S 779 (950)
T ss_dssp HHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESCHH------HHHHHHHHHHHHTTTTCSSCS-E
T ss_pred HHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECCHH------HHHHHHHHhhhccchhhcCCC-c
Confidence 444454445568999999998 455666665 346679999997542 356666666654 2234554 3
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHH-HHhcCCcEEEEEecc
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRM-VKSLNPKLVTVVEQD 459 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~-Vr~L~PkVVtlvEqE 459 (587)
.+.+..+..++.. ..+..=+|-|...|||+++. .+..+|+. .+-|+|.++++....
T Consensus 780 VefiqGDa~dLp~-----~d~sFDlVV~~eVLeHL~dp------~l~~~L~eI~RvLKPG~LIISTPN 836 (950)
T 3htx_A 780 ATLYDGSILEFDS-----RLHDVDIGTCLEVIEHMEED------QACEFGEKVLSLFHPKLLIVSTPN 836 (950)
T ss_dssp EEEEESCTTSCCT-----TSCSCCEEEEESCGGGSCHH------HHHHHHHHHHHTTCCSEEEEEECB
T ss_pred eEEEECchHhCCc-----ccCCeeEEEEeCchhhCChH------HHHHHHHHHHHHcCCCEEEEEecC
Confidence 4444555544432 22222244456789999762 23456655 578999966666554
No 16
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=93.62 E-value=0.51 Score=46.67 Aligned_cols=113 Identities=11% Similarity=0.102 Sum_probs=60.4
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC---CceEEEEeeC
Q 007853 322 EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG---VPFEFHAVPS 398 (587)
Q Consensus 322 ~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg---vpFeF~~V~~ 398 (587)
.+..+|+|+|.|-|.--..++..|+.+..+ -.+.+|||+.+.. .++...+++ ++.-+ +.|+|.. .
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~------ml~~a~~~~---~~~~~~~~v~~~~~~--~ 118 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAE------QIAKYKELV---AKTSNLENVKFAWHK--E 118 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHH------HHHHHHHHH---HTCSSCTTEEEEEEC--S
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHH------HHHHHHHHH---HhccCCCcceEEEEe--c
Confidence 456799999999995444577777665211 1334599986532 233333332 22123 3444432 2
Q ss_pred CCCCCCCC-ccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEE
Q 007853 399 KTSLVTPS-MLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVT 454 (587)
Q Consensus 399 ~~e~l~~~-~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVt 454 (587)
..+++... .....++..=+|-|.+.|||++| ...+|+.+ |-|+|.-.+
T Consensus 119 ~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l 168 (292)
T 2aot_A 119 TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD--------IPATLKFFHSLLGTNAKM 168 (292)
T ss_dssp CHHHHHHHHHTTTCCCCEEEEEEESCGGGCSC--------HHHHHHHHHHTEEEEEEE
T ss_pred chhhhhhhhccccCCCceeEEEEeeeeeecCC--------HHHHHHHHHHHcCCCcEE
Confidence 22111100 00012333446778889999976 24566666 557998444
No 17
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=93.56 E-value=0.56 Score=47.19 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=61.4
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
..|++.+.-.+ .+|+|+|-|.|. +...|+.+. |.+++|+++.+.. ++...+++.+.. +.-.++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~~-------~~~a~~~~~~~~--~~~~v~ 220 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDREGS-------LGVARDNLSSLL--AGERVS 220 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECTTC-------THHHHHHTHHHH--HTTSEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcHHH-------HHHHHHHHhhcC--CCCcEE
Confidence 45666654334 799999999995 444444442 4579999998332 233333433221 111244
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEecc
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQD 459 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEqE 459 (587)
|.. .+..+ + +. ..-+++ -+...|||.+++ ....+|+.+ +.|+|.- ++++|.-
T Consensus 221 ~~~--~d~~~--~--~~-~~~D~v--~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 221 LVG--GDMLQ--E--VP-SNGDIY--LLSRIIGDLDEA------ASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp EEE--SCTTT--C--CC-SSCSEE--EEESCGGGCCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred Eec--CCCCC--C--CC-CCCCEE--EEchhccCCCHH------HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 543 32222 1 11 111233 355678888653 234667666 5689974 4556543
No 18
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=93.46 E-value=0.32 Score=49.72 Aligned_cols=110 Identities=17% Similarity=0.109 Sum_probs=60.9
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC--c
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV--P 390 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv--p 390 (587)
..|++.+.-.+.-+|+|+|-|.|.- ...|+.+- |.+++|+++.+... . .+.++..++ .
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~~~-------~------~~~~~~~~~~~~ 233 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGF----LLTVLREH---PGLQGVLLDRAEVV-------A------RHRLDAPDVAGR 233 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHH----HHHHHHHC---TTEEEEEEECHHHH-------T------TCCCCCGGGTTS
T ss_pred HHHHHhCCccCCceEEEECCccCHH----HHHHHHHC---CCCEEEEecCHHHh-------h------cccccccCCCCC
Confidence 3567776556678999999999853 34444432 57899999874211 0 111111222 2
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEec
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQ 458 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEq 458 (587)
.+|..- +..+ .+. .-+ +|-+...|||++|+ ....+|+.+ +.|+|.- ++++|.
T Consensus 234 v~~~~~--d~~~----~~p--~~D--~v~~~~vlh~~~d~------~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 234 WKVVEG--DFLR----EVP--HAD--VHVLKRILHNWGDE------DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp EEEEEC--CTTT----CCC--CCS--EEEEESCGGGSCHH------HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred eEEEec--CCCC----CCC--CCc--EEEEehhccCCCHH------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 455442 2211 111 122 34445678998763 234677766 5689974 445554
No 19
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.26 E-value=0.67 Score=47.30 Aligned_cols=113 Identities=26% Similarity=0.269 Sum_probs=65.2
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-- 390 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-- 390 (587)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. |.+++|+++. .. .++...++ ++..|++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~-~~------~~~~a~~~----~~~~~~~~~ 233 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVEL-AG------PAERARRR----FADAGLADR 233 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HH------HHHHHHHH----HHHTTCTTT
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeC-HH------HHHHHHHH----HHhcCCCCc
Confidence 45667665556679999999999 3444555442 5689999986 32 23333333 3345654
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEec
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQ 458 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEq 458 (587)
.+|... +..+ .+ +..+=+|-|...|||++++ ....+|+.+ +.|+|.- ++++|.
T Consensus 234 v~~~~~--d~~~----~~---~~~~D~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 234 VTVAEG--DFFK----PL---PVTADVVLLSFVLLNWSDE------DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEC--CTTS----CC---SCCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEeC--CCCC----cC---CCCCCEEEEeccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEec
Confidence 555442 2211 01 1123345566678998763 223566665 5689985 555665
No 20
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=92.34 E-value=1.2 Score=42.46 Aligned_cols=122 Identities=13% Similarity=0.150 Sum_probs=65.0
Q ss_pred CcchhhhHHhhHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHH
Q 007853 302 PCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLE 381 (587)
Q Consensus 302 P~~kfa~~tANqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~ 381 (587)
.++.-+....-..|++.+.-.+.-+|+|+|.|.|.--..|.+.+ + .++|||+.... .++.+.+++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~----~----~~v~~vD~s~~------~~~~a~~~~~ 99 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY----G----AHTHGIDICSN------IVNMANERVS 99 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHH------HHHHHHHTCC
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc----C----CEEEEEeCCHH------HHHHHHHHhh
Confidence 34444444555677777766667799999999885433333333 2 48999986432 1222221111
Q ss_pred HHHHHcCCceEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEE
Q 007853 382 SLAEALGVPFEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTV 455 (587)
Q Consensus 382 ~fA~~lgvpFeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtl 455 (587)
.. -..+|.. .+..++ ...++..=+|-|...|||+++ .....+|+.+ +-|+|.-.++
T Consensus 100 ~~-----~~~~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~------~~~~~~l~~~~~~L~pgG~l~ 156 (266)
T 3ujc_A 100 GN-----NKIIFEA--NDILTK-----EFPENNFDLIYSRDAILALSL------ENKNKLFQKCYKWLKPTGTLL 156 (266)
T ss_dssp SC-----TTEEEEE--CCTTTC-----CCCTTCEEEEEEESCGGGSCH------HHHHHHHHHHHHHEEEEEEEE
T ss_pred cC-----CCeEEEE--CccccC-----CCCCCcEEEEeHHHHHHhcCh------HHHHHHHHHHHHHcCCCCEEE
Confidence 10 2334433 333322 222333445556678999853 1234566655 6689974443
No 21
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=92.21 E-value=0.94 Score=46.21 Aligned_cols=115 Identities=12% Similarity=0.100 Sum_probs=66.2
Q ss_pred hHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-
Q 007853 312 NGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP- 390 (587)
Q Consensus 312 NqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp- 390 (587)
...|++.+.-.+.-+|+|+|-|.|.- ...|+.+. |.+++|+++. .. .++...+++ +..|++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---p~~~~~~~D~-~~------~~~~a~~~~----~~~~~~~ 240 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDI----SAAMLKHF---PELDSTILNL-PG------AIDLVNENA----AEKGVAD 240 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHH----HHHHHHHC---TTCEEEEEEC-GG------GHHHHHHHH----HHTTCTT
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHH----HHHHHHHC---CCCeEEEEec-HH------HHHHHHHHH----HhcCCCC
Confidence 35677777656677999999999863 34444432 5679999987 32 133343333 344553
Q ss_pred -eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEecc
Q 007853 391 -FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQD 459 (587)
Q Consensus 391 -FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEqE 459 (587)
.+|.. .+..+. .+..+++++ +...|||++|+ ....+|+.+ +.|+|.- ++++|.-
T Consensus 241 ~v~~~~--~d~~~~-----~~~~~D~v~--~~~vlh~~~d~------~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 241 RMRGIA--VDIYKE-----SYPEADAVL--FCRILYSANEQ------LSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp TEEEEE--CCTTTS-----CCCCCSEEE--EESCGGGSCHH------HHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred CEEEEe--CccccC-----CCCCCCEEE--EechhccCCHH------HHHHHHHHHHHhcCCCCEEEEEecc
Confidence 55543 333222 122234444 34578888763 245677766 5679874 4466643
No 22
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=92.13 E-value=1.6 Score=41.61 Aligned_cols=117 Identities=13% Similarity=0.039 Sum_probs=64.6
Q ss_pred hhhHHhhHHHHhhhcc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHH
Q 007853 306 FGFMAANGAIIEAFKG-EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLA 384 (587)
Q Consensus 306 fa~~tANqAILEA~~g-~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA 384 (587)
-++......+++.+.+ .+.-+|+|+|.|.|.. ...|+.+. |. ++|||+.... .++ ...+.+
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~-~v~~vD~s~~------~~~----~a~~~~ 89 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYV---KG-QITGIDLFPD------FIE----IFNENA 89 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHC---CS-EEEEEESCHH------HHH----HHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhC---CC-eEEEEECCHH------HHH----HHHHHH
Confidence 3333444445555533 3345899999999854 33444442 22 9999996532 122 333445
Q ss_pred HHcCCc--eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 385 EALGVP--FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 385 ~~lgvp--FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
+..|++ .+|. ..+.+++. ..++..=+|-|...|||+ + ...+|+.+ +-|+|.-++++
T Consensus 90 ~~~~~~~~~~~~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~-~--------~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 90 VKANCADRVKGI--TGSMDNLP-----FQNEELDLIWSEGAIYNI-G--------FERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp HHTTCTTTEEEE--ECCTTSCS-----SCTTCEEEEEEESCSCCC-C--------HHHHHHHHHTTEEEEEEEEE
T ss_pred HHcCCCCceEEE--ECChhhCC-----CCCCCEEEEEecChHhhc-C--------HHHHHHHHHHHcCCCcEEEE
Confidence 667776 5554 33333332 223334455555678887 2 23566655 56899755443
No 23
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=91.89 E-value=0.79 Score=42.79 Aligned_cols=114 Identities=20% Similarity=0.291 Sum_probs=62.5
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc----
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP---- 390 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp---- 390 (587)
|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+.... .++.+.++ ++..|++
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~~~ 83 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYR------SLEIAQER----LDRLRLPRNQW 83 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHH------HHHHHHHH----HTTCCCCHHHH
T ss_pred HHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHH------HHHHHHHH----HHHhcCCcccC
Confidence 4444444455689999999985 455566552 3469999997532 23333333 3334443
Q ss_pred --eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEec
Q 007853 391 --FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVEQ 458 (587)
Q Consensus 391 --FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvEq 458 (587)
++|.. .+...+.. .-..=++|+ |...|||+++. ....+|+.+ +-|+|.-++++..
T Consensus 84 ~~v~~~~--~d~~~~~~---~~~~fD~v~--~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 84 ERLQLIQ--GALTYQDK---RFHGYDAAT--VIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp TTEEEEE--CCTTSCCG---GGCSCSEEE--EESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cceEEEe--CCcccccc---cCCCcCEEe--eHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEEcc
Confidence 44433 33322211 111112333 55678998642 245677766 5589998766653
No 24
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=91.88 E-value=3.5 Score=40.44 Aligned_cols=105 Identities=22% Similarity=0.234 Sum_probs=58.7
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCC
Q 007853 322 EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTS 401 (587)
Q Consensus 322 ~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e 401 (587)
.+...|+|+|.|.|. +...|+.+- |+..++|||+.... .++.+ .+.++..+...+| +..+..
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~~~~v~gvD~s~~------~~~~a----~~~~~~~~~~v~~--~~~d~~ 82 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PEGSKYTGIDSGET------LLAEA----RELFRLLPYDSEF--LEGDAT 82 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CTTCEEEEEESCHH------HHHHH----HHHHHSSSSEEEE--EESCTT
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CCCCEEEEEECCHH------HHHHH----HHHHHhcCCceEE--EEcchh
Confidence 456789999999983 445566552 23478999986432 12222 2233444554444 344444
Q ss_pred CCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHH-HHhcCCcEEE-EEec
Q 007853 402 LVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRM-VKSLNPKLVT-VVEQ 458 (587)
Q Consensus 402 ~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~-Vr~L~PkVVt-lvEq 458 (587)
++.. ++..=+|-|...|||++| + ..+|+. .+-|+|.-.+ ++|.
T Consensus 83 ~~~~------~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 83 EIEL------NDKYDIAICHAFLLHMTT-------P-ETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp TCCC------SSCEEEEEEESCGGGCSS-------H-HHHHHHHHHTEEEEEEEEEEEC
T ss_pred hcCc------CCCeeEEEECChhhcCCC-------H-HHHHHHHHHHcCCCCEEEEEec
Confidence 3322 232334555567889865 2 345554 4678998555 4443
No 25
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=91.86 E-value=1.8 Score=43.95 Aligned_cols=114 Identities=20% Similarity=0.264 Sum_probs=64.6
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-- 390 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-- 390 (587)
..|++.+.-.+..+|+|+|.|.|.- ...|+.+. |.+++|+++.+. .++...++ ++..|++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~----~~~l~~~~---~~~~~~~~D~~~-------~~~~a~~~----~~~~~~~~~ 234 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGF----AAAIARRA---PHVSATVLEMAG-------TVDTARSY----LKDEGLSDR 234 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECTT-------HHHHHHHH----HHHTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHH----HHHHHHhC---CCCEEEEecCHH-------HHHHHHHH----HHhcCCCCc
Confidence 4566666555667999999999853 34444432 568999998622 13333333 3445653
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEecc
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQD 459 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEqE 459 (587)
++|.. .+..+- + ++.+=+|-+...|||++++ ....+|+.+ +.|+|.- ++++|..
T Consensus 235 v~~~~--~d~~~~----~---~~~~D~v~~~~vl~~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 235 VDVVE--GDFFEP----L---PRKADAIILSFVLLNWPDH------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEE--CCTTSC----C---SSCEEEEEEESCGGGSCHH------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEe--CCCCCC----C---CCCccEEEEcccccCCCHH------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 55544 222210 1 1123345556678998653 224566665 5689975 4556643
No 26
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=91.77 E-value=1.1 Score=43.83 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=64.9
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
..+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+.... .++ ...+.++..|+..+
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~~------~~~----~a~~~~~~~~~~~~ 170 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNEN------SIA----FLNETKEKENLNIS 170 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCHH------HHH----HHHHHHHHTTCCEE
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCHH------HHH----HHHHHHHHcCCceE
Confidence 455666655567789999999985 44556665 2 38999996532 123 33344556677555
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
|.. .+..++.. ++..=+|-|...|||++++ .+..+|+.+ +.|+|.-++++
T Consensus 171 ~~~--~d~~~~~~------~~~fD~i~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 171 TAL--YDINAANI------QENYDFIVSTVVFMFLNRE------RVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp EEE--CCGGGCCC------CSCEEEEEECSSGGGSCGG------GHHHHHHHHHHTEEEEEEEEE
T ss_pred EEE--eccccccc------cCCccEEEEccchhhCCHH------HHHHHHHHHHHhcCCCcEEEE
Confidence 544 33322221 2323344455578898653 245677765 66899865433
No 27
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=91.53 E-value=0.98 Score=41.53 Aligned_cols=98 Identities=16% Similarity=0.157 Sum_probs=54.2
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-.|+|+|.|.|. +...|+.+ + .++|||+.... .++. |+...-..+|. ..+..+
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~--------a~~~~~~~~~~--~~d~~~- 95 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPATR------LVEL--------ARQTHPSVTFH--HGTITD- 95 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCHH------HHHH--------HHHHCTTSEEE--CCCGGG-
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCHH------HHHH--------HHHhCCCCeEE--eCcccc-
Confidence 5679999999985 55566665 2 28999986432 1222 22222123332 222222
Q ss_pred CCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 404 TPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+...++..=+|-|...|||++.+ + ...+|+.+ +.|+|.-.+++.
T Consensus 96 ----~~~~~~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 96 ----LSDSPKRWAGLLAWYSLIHMGPG-----E-LPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp ----GGGSCCCEEEEEEESSSTTCCTT-----T-HHHHHHHHHHTEEEEEEEEEE
T ss_pred ----cccCCCCeEEEEehhhHhcCCHH-----H-HHHHHHHHHHHcCCCcEEEEE
Confidence 22333434455566789999743 2 34566655 678997555443
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=91.44 E-value=0.93 Score=42.19 Aligned_cols=104 Identities=19% Similarity=0.256 Sum_probs=56.4
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc----eEEEEeeCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP----FEFHAVPSK 399 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp----FeF~~V~~~ 399 (587)
.-.|+|+|.|.|. +...|+.+ + .++|||+.... .+ +...+.++..++. -....+..+
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~------~~----~~a~~~~~~~~~~~~~~~~~~~~~~d 91 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-G----YSVTGIDINSE------AI----RLAETAARSPGLNQKTGGKAEFKVEN 91 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHH------HH----HHHHHHTTCCSCCSSSSCEEEEEECC
T ss_pred CCeEEEECCCCCH----HHHHHHhC-C----CeEEEEECCHH------HH----HHHHHHHHhcCCccccCcceEEEEec
Confidence 3479999999884 44455555 2 38999986432 12 2223334445552 122333333
Q ss_pred CCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 400 TSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 400 ~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
..++. ...+..=+|-+...|||+++. ..+..+|+.+ +.|+|.-++++
T Consensus 92 ~~~~~-----~~~~~~D~v~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 92 ASSLS-----FHDSSFDFAVMQAFLTSVPDP-----KERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp TTSCC-----SCTTCEEEEEEESCGGGCCCH-----HHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccC-----CCCCceeEEEEcchhhcCCCH-----HHHHHHHHHHHHHcCCCeEEEE
Confidence 33322 222333355556789999762 2244677766 56899755433
No 29
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=91.43 E-value=0.71 Score=43.12 Aligned_cols=117 Identities=17% Similarity=0.219 Sum_probs=64.5
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC---
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV--- 389 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv--- 389 (587)
+.|++.+...+.-.|+|+|.|.|. +...|+.+. |..++|||+.... .++.+.+++ +..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~ 81 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYS------VLERAKDRL----KIDRLPEM 81 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHH------HHHHHHHHH----TGGGSCHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHH------HHHHHHHHH----Hhhccccc
Confidence 344455544555689999999985 556666652 4479999997532 233333332 22333
Q ss_pred ---ceEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEecc
Q 007853 390 ---PFEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVEQD 459 (587)
Q Consensus 390 ---pFeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvEqE 459 (587)
.++|.. .+...+. ...+..=+|-|...|||++++ .+..+|+.+ +.|+|.-++++...
T Consensus 82 ~~~~v~~~~--~d~~~~~-----~~~~~fD~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 82 QRKRISLFQ--SSLVYRD-----KRFSGYDAATVIEVIEHLDEN------RLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp HHTTEEEEE--CCSSSCC-----GGGTTCSEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cCcceEEEe--Ccccccc-----cccCCCCEEEEHHHHHhCCHH------HHHHHHHHHHHhhCCCEEEEEccc
Confidence 244433 3332221 111111133366778999652 235667665 56899987666544
No 30
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=90.99 E-value=0.75 Score=42.78 Aligned_cols=43 Identities=14% Similarity=0.324 Sum_probs=30.9
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
..+++.+...+.-.|+|+|.|.|. +...|+.+ ..++|||+...
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~ 77 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-----GRTVYGIEPSR 77 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-----TCEEEEECSCH
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-----CCeEEEEeCCH
Confidence 466676666667799999999984 45556655 24899998643
No 31
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=90.81 E-value=0.63 Score=48.12 Aligned_cols=108 Identities=23% Similarity=0.234 Sum_probs=59.9
Q ss_pred HHHHhhhc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCce
Q 007853 313 GAIIEAFK-GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391 (587)
Q Consensus 313 qAILEA~~-g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpF 391 (587)
..|++++. -...-+|+|+|-|.|. +...|+.+- |.+++|+++.|... + .|+.. -..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~~~-------~--------~a~~~-~~v 248 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLPHVI-------Q--------DAPAF-SGV 248 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHHHH-------T--------TCCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehHHHH-------H--------hhhhc-CCC
Confidence 45666665 3456799999999985 344444432 67899999873211 1 11111 123
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEecc
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQD 459 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEqE 459 (587)
+|.. .+..+ .+. .++++ -+.+.|||++|+ ....+|+.+ +.|+|.- ++++|.-
T Consensus 249 ~~~~--~d~~~----~~p--~~D~v--~~~~vlh~~~~~------~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 249 EHLG--GDMFD----GVP--KGDAI--FIKWICHDWSDE------HCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp EEEE--CCTTT----CCC--CCSEE--EEESCGGGBCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEe--cCCCC----CCC--CCCEE--EEechhhcCCHH------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 4433 22221 111 23444 344568999763 234677766 5689974 5566643
No 32
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=90.67 E-value=0.66 Score=47.95 Aligned_cols=108 Identities=18% Similarity=0.252 Sum_probs=60.1
Q ss_pred HHHHhhhc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCce
Q 007853 313 GAIIEAFK-GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391 (587)
Q Consensus 313 qAILEA~~-g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpF 391 (587)
..|++++. -...-+|+|+|-|.|.- ...|+.+- |.+++|+++.|... + .|+.. -..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~----~~~l~~~~---p~~~~~~~D~~~~~-------~--------~a~~~-~~v 246 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGAT----VAAIAAHY---PTIKGVNFDLPHVI-------S--------EAPQF-PGV 246 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHH----HHHHHHHC---TTCEEEEEECHHHH-------T--------TCCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHH----HHHHHHHC---CCCeEEEecCHHHH-------H--------hhhhc-CCe
Confidence 45667665 34567999999999854 34444432 66799999874221 1 11111 124
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEecc
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQD 459 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEqE 459 (587)
+|.. .+..+ + +. .+++++ +...||+++|+ ....+|+.+ +.|+|.- ++++|.-
T Consensus 247 ~~~~--~D~~~--~--~p--~~D~v~--~~~vlh~~~d~------~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 247 THVG--GDMFK--E--VP--SGDTIL--MKWILHDWSDQ------HCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp EEEE--CCTTT--C--CC--CCSEEE--EESCGGGSCHH------HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred EEEe--CCcCC--C--CC--CCCEEE--ehHHhccCCHH------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 4433 22221 1 11 234443 45579999763 234677777 5689974 4566643
No 33
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=90.13 E-value=2.7 Score=41.09 Aligned_cols=113 Identities=11% Similarity=0.165 Sum_probs=63.8
Q ss_pred HHHHhhh----ccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC
Q 007853 313 GAIIEAF----KGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG 388 (587)
Q Consensus 313 qAILEA~----~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg 388 (587)
..|++.+ .-.+.-+|+|+|.|.|..-..|.+.+ + .++|||+.... .++... +.++..|
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~------~~~~a~----~~~~~~~ 129 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPV------QNKRNE----EYNNQAG 129 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHH------HHHHHH----HHHHHHT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHH------HHHHHH----HHHHhcC
Confidence 3445555 33455689999999887555554443 2 28999986532 233333 3344456
Q ss_pred Cc--eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEE-EEEec
Q 007853 389 VP--FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLV-TVVEQ 458 (587)
Q Consensus 389 vp--FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVV-tlvEq 458 (587)
++ ++|. ..+..++ ...++..=+|-+...|||+++ ...+|+.+ +-|+|.-. ++++.
T Consensus 130 ~~~~~~~~--~~d~~~~-----~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 130 LADNITVK--YGSFLEI-----PCEDNSYDFIWSQDAFLHSPD--------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp CTTTEEEE--ECCTTSC-----SSCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcceEEE--EcCcccC-----CCCCCCEeEEEecchhhhcCC--------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 54 4544 3333332 223344445666778999976 24556555 66899744 34443
No 34
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=90.12 E-value=2.2 Score=40.02 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=54.0
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHc--CCceEEEEeeCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEAL--GVPFEFHAVPSKT 400 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~l--gvpFeF~~V~~~~ 400 (587)
+.-+|+|+|.|.|. +...|+.+ + .++|||+.... .++ .|+.. +...+|.. .+.
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~------~~~--------~a~~~~~~~~~~~~~--~d~ 107 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDISEV------MIQ--------KGKERGEGPDLSFIK--GDL 107 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHH------HHH--------HHHTTTCBTTEEEEE--CBT
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECCHH------HHH--------HHHhhcccCCceEEE--cch
Confidence 34589999999885 44556655 2 38999986432 122 23322 23344433 333
Q ss_pred CCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHH-HHHhcCCcEEEEEe
Q 007853 401 SLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLR-MVKSLNPKLVTVVE 457 (587)
Q Consensus 401 e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~-~Vr~L~PkVVtlvE 457 (587)
.++ ...++..=+|-|...|||+++ +. .+|+ ..+.|+|.-++++.
T Consensus 108 ~~~-----~~~~~~fD~v~~~~~l~~~~~-------~~-~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 108 SSL-----PFENEQFEAIMAINSLEWTEE-------PL-RALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp TBC-----SSCTTCEEEEEEESCTTSSSC-------HH-HHHHHHHHHEEEEEEEEEE
T ss_pred hcC-----CCCCCCccEEEEcChHhhccC-------HH-HHHHHHHHHhCCCeEEEEE
Confidence 222 222344445556678999854 23 4555 44678997655443
No 35
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.96 E-value=1.3 Score=43.20 Aligned_cols=110 Identities=9% Similarity=0.067 Sum_probs=58.1
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF 393 (587)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+.+. ++|||+.... .++.+.+ .++..|+.-..
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~~----~v~gvd~s~~------~~~~a~~----~~~~~~~~~~~ 116 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYDV----NVVGLTLSKN------QANHVQQ----LVANSENLRSK 116 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHCC----EEEEEESCHH------HHHHHHH----HHHTCCCCSCE
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcCC----EEEEEECCHH------HHHHHHH----HHHhcCCCCCe
Confidence 45555544556689999988875 34444433221 9999986432 2333322 33445653233
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEE
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTV 455 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtl 455 (587)
+.+..+..++. ..=++ |-|...|||++++ + ...+|+.+ +-|+|.-.++
T Consensus 117 ~~~~~d~~~~~------~~fD~--v~~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~ 165 (287)
T 1kpg_A 117 RVLLAGWEQFD------EPVDR--IVSIGAFEHFGHE-----R-YDAFFSLAHRLLPADGVML 165 (287)
T ss_dssp EEEESCGGGCC------CCCSE--EEEESCGGGTCTT-----T-HHHHHHHHHHHSCTTCEEE
T ss_pred EEEECChhhCC------CCeeE--EEEeCchhhcChH-----H-HHHHHHHHHHhcCCCCEEE
Confidence 33333333332 11123 3344578999652 2 34555554 6789974443
No 36
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=89.76 E-value=3.1 Score=41.41 Aligned_cols=109 Identities=12% Similarity=0.033 Sum_probs=61.2
Q ss_pred HHHHhhhc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-
Q 007853 313 GAIIEAFK-GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP- 390 (587)
Q Consensus 313 qAILEA~~-g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp- 390 (587)
+.|++.+. -...-+|+|+|.|.|.- ...|+.+.+ .++|||+.... .++ ...+.++..|++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~----~a~~~~~~~~~~~ 167 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGS----MVMAHRRFG----SRVEGVTLSAA------QAD----FGNRRARELRIDD 167 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHH----HHHHHHHHC----CEEEEEESCHH------HHH----HHHHHHHHTTCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHH----HHHHHHHcC----CEEEEEeCCHH------HHH----HHHHHHHHcCCCC
Confidence 34666665 34456899999988843 334444422 48999986432 222 333445667776
Q ss_pred -eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEE
Q 007853 391 -FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTV 455 (587)
Q Consensus 391 -FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtl 455 (587)
.+|.. .+.+++. ...+..=+|-|...|||+ + ...+|+.+ +-|+|.-.++
T Consensus 168 ~v~~~~--~d~~~~~-----~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 168 HVRSRV--CNMLDTP-----FDKGAVTASWNNESTMYV-D--------LHDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp TEEEEE--CCTTSCC-----CCTTCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEE--CChhcCC-----CCCCCEeEEEECCchhhC-C--------HHHHHHHHHHHcCCCcEEE
Confidence 55543 3333322 222333344456678887 3 23555554 6789975443
No 37
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=89.25 E-value=4.8 Score=38.70 Aligned_cols=125 Identities=14% Similarity=0.008 Sum_probs=69.8
Q ss_pred HHhCCcchhhhHHhhHHHHhhhc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHH
Q 007853 298 FEVCPCFKFGFMAANGAIIEAFK-GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQII 376 (587)
Q Consensus 298 ~e~sP~~kfa~~tANqAILEA~~-g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~et 376 (587)
|+-.+...-+....-..+++.+. -.+.-+|+|+|.|.|. +...|+.+ +..++|||+.... .++
T Consensus 20 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~----~~~~v~gvD~s~~------~~~-- 83 (267)
T 3kkz_A 20 FSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGH----VTGQVTGLDFLSG------FID-- 83 (267)
T ss_dssp HHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTT----CSSEEEEEESCHH------HHH--
T ss_pred HhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhc----cCCEEEEEeCCHH------HHH--
Confidence 33333333333344444555554 2345689999998873 55566766 3459999986432 233
Q ss_pred HHHHHHHHHHcCCc--eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEE
Q 007853 377 GLRLESLAEALGVP--FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLV 453 (587)
Q Consensus 377 G~rL~~fA~~lgvp--FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVV 453 (587)
...+.++..|++ .+|.. .+.+++. ...+..=+|-|...+||+ + ...+|+.+ +-|+|.-+
T Consensus 84 --~a~~~~~~~~~~~~v~~~~--~d~~~~~-----~~~~~fD~i~~~~~~~~~-~--------~~~~l~~~~~~LkpgG~ 145 (267)
T 3kkz_A 84 --IFNRNARQSGLQNRVTGIV--GSMDDLP-----FRNEELDLIWSEGAIYNI-G--------FERGLNEWRKYLKKGGY 145 (267)
T ss_dssp --HHHHHHHHTTCTTTEEEEE--CCTTSCC-----CCTTCEEEEEESSCGGGT-C--------HHHHHHHHGGGEEEEEE
T ss_pred --HHHHHHHHcCCCcCcEEEE--cChhhCC-----CCCCCEEEEEEcCCceec-C--------HHHHHHHHHHHcCCCCE
Confidence 333445666775 55543 3443332 223334455566778887 3 23456555 66899855
Q ss_pred EEE
Q 007853 454 TVV 456 (587)
Q Consensus 454 tlv 456 (587)
+++
T Consensus 146 l~~ 148 (267)
T 3kkz_A 146 LAV 148 (267)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 38
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=88.79 E-value=2.5 Score=40.59 Aligned_cols=110 Identities=21% Similarity=0.276 Sum_probs=61.9
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-- 390 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-- 390 (587)
..|++.+.-.+.-+|+|+|.|.|.. ...|+.+.+ .++|||+.... .++. ..+.++..|++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~~----~~v~gvD~s~~------~~~~----a~~~~~~~~~~~~ 112 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKP----AVRLATARD----VRVTGISISRP------QVNQ----ANARATAAGLANR 112 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHH----HHHHHHHSC----CEEEEEESCHH------HHHH----HHHHHHHTTCTTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHH----HHHHHHhcC----CEEEEEeCCHH------HHHH----HHHHHHhcCCCcc
Confidence 3455555444566999999988853 334444332 48999986432 1222 23344556665
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEE
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTV 455 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtl 455 (587)
.+|.. .+..++ ...++..=+|-+...|||+++ ...+|+.+ +-|+|.-.++
T Consensus 113 ~~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~ 163 (273)
T 3bus_A 113 VTFSY--ADAMDL-----PFEDASFDAVWALESLHHMPD--------RGRALREMARVLRPGGTVA 163 (273)
T ss_dssp EEEEE--CCTTSC-----CSCTTCEEEEEEESCTTTSSC--------HHHHHHHHHTTEEEEEEEE
T ss_pred eEEEE--CccccC-----CCCCCCccEEEEechhhhCCC--------HHHHHHHHHHHcCCCeEEE
Confidence 45443 333332 222333335556677899865 24666665 5689985443
No 39
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=88.76 E-value=2.5 Score=40.13 Aligned_cols=110 Identities=17% Similarity=0.151 Sum_probs=61.3
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-- 390 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-- 390 (587)
..|++.+.-.+.-+|+|+|.|.|..- ..|+.+.+ .++|||+.... .++ ...+.++..|++
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~----~~la~~~~----~~v~gvD~s~~------~l~----~a~~~~~~~~~~~~ 87 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEML----CTWARDHG----ITGTGIDMSSL------FTA----QAKRRAEELGVSER 87 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHH----HHHHHHTC----CEEEEEESCHH------HHH----HHHHHHHHTTCTTT
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHH----HHHHHhcC----CeEEEEeCCHH------HHH----HHHHHHHhcCCCcc
Confidence 34455554445568999999998633 34444332 27899986432 233 333445566765
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
.+|.. .+.+++.. ++..=+|-|...+||+++ + ..+|+.+ +-|+|.-.+++
T Consensus 88 v~~~~--~d~~~~~~------~~~fD~V~~~~~~~~~~~-------~-~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 88 VHFIH--NDAAGYVA------NEKCDVAACVGATWIAGG-------F-AGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EEEEE--SCCTTCCC------SSCEEEEEEESCGGGTSS-------S-HHHHHHHTTSEEEEEEEEE
T ss_pred eEEEE--CChHhCCc------CCCCCEEEECCChHhcCC-------H-HHHHHHHHHHcCCCeEEEE
Confidence 66644 33333321 222334445667889875 1 3556555 56899855443
No 40
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=88.23 E-value=3.5 Score=40.67 Aligned_cols=118 Identities=8% Similarity=0.052 Sum_probs=63.8
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
..|++.+.-.+.-+|+|+|.|.|.- ...|+.+.+ .++|||+.... .++.+. +.++..|++-.
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~~a~----~~~~~~~~~~~ 123 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGST----MRHAVAEYD----VNVIGLTLSEN------QYAHDK----AMFDEVDSPRR 123 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHH----HHHHHHHHC----CEEEEEECCHH------HHHHHH----HHHHHSCCSSC
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHH----HHHHHHhCC----CEEEEEECCHH------HHHHHH----HHHHhcCCCCc
Confidence 3456666555667899999988753 344444322 58999997432 233333 33455677633
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCccc-ccchHHHHHHHH-HhcCCcEEEEE
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVS-TVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs-~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
.+.+..+..++ ++..=+|-+...|||++|.... .......+|+.+ +-|+|.-.+++
T Consensus 124 v~~~~~d~~~~--------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 124 KEVRIQGWEEF--------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp EEEEECCGGGC--------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred eEEEECCHHHc--------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 33343443333 2222223344678999874210 012345666655 66899854443
No 41
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=88.15 E-value=5.9 Score=40.94 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=62.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHc-C----CceEEEEee
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEAL-G----VPFEFHAVP 397 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~l-g----vpFeF~~V~ 397 (587)
+.-+|+|+|.|.|.--..|.+.+ .|..++|||+.... .++.+.+++.+.+..+ | -..+|..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s~~------~l~~a~~~~~~~~~~~~g~~~~~~v~~~~-- 148 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDMLDN------QLEVARKYVEYHAEKFFGSPSRSNVRFLK-- 148 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECCHH------HHHHHHHTHHHHHHHHHSSTTCCCEEEEE--
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECCHH------HHHHHHHHHHHhhhhcccccCCCceEEEE--
Confidence 34589999999985333333333 13359999997432 3566677776666554 4 2444443
Q ss_pred CCCCCCCCC-ccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 398 SKTSLVTPS-MLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 398 ~~~e~l~~~-~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
.+.+++... .....++..=+|-+...|||++| ...+|+.+ +-|+|.-++++
T Consensus 149 ~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d--------~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 149 GFIENLATAEPEGVPDSSVDIVISNCVCNLSTN--------KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp SCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred ccHHHhhhcccCCCCCCCEEEEEEccchhcCCC--------HHHHHHHHHHHcCCCCEEEE
Confidence 344333110 01223333334445567888865 23566555 67899855444
No 42
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=87.38 E-value=1.4 Score=42.70 Aligned_cols=43 Identities=23% Similarity=0.229 Sum_probs=28.4
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
..|++.+...+.-+|+|+|.|.|. +...|+. |..++|||+...
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~ 66 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSI 66 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCH
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCH
Confidence 345555544556789999999986 3344443 335999999653
No 43
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=86.91 E-value=3 Score=40.64 Aligned_cols=111 Identities=16% Similarity=0.185 Sum_probs=61.4
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 394 (587)
+++.+... .-+|+|+|.|.|. +...|+.+ + .++|||+.... .++.+ .+.++..|++-...
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~~------~~~~a----~~~~~~~~~~~~v~ 120 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDLSAQ------MIDRA----KQAAEAKGVSDNMQ 120 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHHHH----HHHHHC-CCGGGEE
T ss_pred HHHhcCCC-CCEEEEeCCcchH----HHHHHHHC-C----CEEEEEECCHH------HHHHH----HHHHHhcCCCcceE
Confidence 34444333 5689999999983 45566665 2 38999986432 23333 33344556642333
Q ss_pred EeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 395 AVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 395 ~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.+..+..++. ...++..=+|-|...|||+++ + ..+|+.+ +-|+|.-++++.
T Consensus 121 ~~~~d~~~~~----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 121 FIHCAAQDVA----SHLETPVDLILFHAVLEWVAD-------P-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp EEESCGGGTG----GGCSSCEEEEEEESCGGGCSC-------H-HHHHHHHHHTEEEEEEEEEE
T ss_pred EEEcCHHHhh----hhcCCCceEEEECchhhcccC-------H-HHHHHHHHHHcCCCeEEEEE
Confidence 3333333322 122333445556678899865 2 3455554 678998666554
No 44
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=86.56 E-value=2.3 Score=40.27 Aligned_cols=113 Identities=11% Similarity=0.129 Sum_probs=60.2
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
..+++.+...+.-+|+|+|.|.|.--..|.+.. ..++|||+.... .++.+.+++.+ . -..+
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--------~~~v~~vD~s~~------~~~~a~~~~~~----~-~~~~ 143 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL--------YATTDLLEPVKH------MLEEAKRELAG----M-PVGK 143 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH--------CSEEEEEESCHH------HHHHHHHHTTT----S-SEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh--------cCEEEEEeCCHH------HHHHHHHHhcc----C-CceE
Confidence 456666655566799999999986433333332 237999986432 23333332211 1 1233
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
| +..+..++ ...++..=+|-|...|||++++ ....+|+.+ +.|+|.-++++.
T Consensus 144 ~--~~~d~~~~-----~~~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 144 F--ILASMETA-----TLPPNTYDLIVIQWTAIYLTDA------DFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp E--EESCGGGC-----CCCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred E--EEccHHHC-----CCCCCCeEEEEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEE
Confidence 3 33333322 1222333344456689999652 234555554 678998555443
No 45
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=86.23 E-value=1.3 Score=45.45 Aligned_cols=107 Identities=21% Similarity=0.250 Sum_probs=58.4
Q ss_pred HHHHhhhc-cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCce
Q 007853 313 GAIIEAFK-GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391 (587)
Q Consensus 313 qAILEA~~-g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpF 391 (587)
..|++.+. -.+.-+|+|+|-|.|. +...|+.+- |.+++|+++.|.. + +.|+.+. ..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~~~-------~--------~~a~~~~-~v 254 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDLPQV-------I--------ENAPPLS-GI 254 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHHH-------H--------TTCCCCT-TE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeChHHH-------H--------HhhhhcC-CC
Confidence 45666664 2345789999999885 344455442 5679999986221 1 1122111 13
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEec
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQ 458 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEq 458 (587)
+|.. .+..+ . + ++ +=+|-+...|||++|+ .+..+|+.+ +.|+|.- ++++|.
T Consensus 255 ~~~~--~d~~~-~---~---~~-~D~v~~~~~lh~~~d~------~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 255 EHVG--GDMFA-S---V---PQ-GDAMILKAVCHNWSDE------KCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp EEEE--CCTTT-C---C---CC-EEEEEEESSGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEe--CCccc-C---C---CC-CCEEEEecccccCCHH------HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 4433 22221 0 1 11 3344466778999763 233667766 5689974 444553
No 46
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=86.04 E-value=3.1 Score=38.17 Aligned_cols=109 Identities=21% Similarity=0.292 Sum_probs=60.5
Q ss_pred hHHHHhhhcc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC-
Q 007853 312 NGAIIEAFKG-EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV- 389 (587)
Q Consensus 312 NqAILEA~~g-~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv- 389 (587)
...|++.+.. ...-+|+|+|.|.|. +...|+.+ + .++|||+.... ..+.|+..|+
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~s~~--------------~~~~a~~~~~~ 90 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL-A----DRVTALDGSAE--------------MIAEAGRHGLD 90 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH-S----SEEEEEESCHH--------------HHHHHGGGCCT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc-C----CeEEEEeCCHH--------------HHHHHHhcCCC
Confidence 4456666542 233499999999985 34444444 2 38999986432 2223334553
Q ss_pred ceEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEE-EEe
Q 007853 390 PFEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVT-VVE 457 (587)
Q Consensus 390 pFeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVt-lvE 457 (587)
..+|.. .+..++ ..++..=+|-|...|||++++ .+..+|+.+ +-|+|.-++ +++
T Consensus 91 ~~~~~~--~d~~~~------~~~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 91 NVEFRQ--QDLFDW------TPDRQWDAVFFAHWLAHVPDD------RFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp TEEEEE--CCTTSC------CCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeEEEe--cccccC------CCCCceeEEEEechhhcCCHH------HHHHHHHHHHHHcCCCeEEEEEe
Confidence 344433 333332 122333355566789999762 235666655 678997544 444
No 47
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=85.97 E-value=6.7 Score=35.30 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=60.6
Q ss_pred hHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC-c
Q 007853 312 NGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV-P 390 (587)
Q Consensus 312 NqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv-p 390 (587)
++.|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+.... .++.+. +.++..++ .
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s~~------~~~~a~----~~~~~~~~~~ 81 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKNAM------SIANVE----RIKSIENLDN 81 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHH------HHHHHH----HHHHHHTCTT
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECCHH------HHHHHH----HHHHhCCCCC
Confidence 3456666655455599999999885 34455555 2 38999986432 233333 33344455 4
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEE
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVT 454 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVt 454 (587)
.+|.. .+..++. . ++..=+|-+...|||++++ .+..+|+.+ +.|+|.-.+
T Consensus 82 ~~~~~--~d~~~~~-----~-~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~~gG~l 132 (199)
T 2xvm_A 82 LHTRV--VDLNNLT-----F-DRQYDFILSTVVLMFLEAK------TIPGLIANMQRCTKPGGYN 132 (199)
T ss_dssp EEEEE--CCGGGCC-----C-CCCEEEEEEESCGGGSCGG------GHHHHHHHHHHTEEEEEEE
T ss_pred cEEEE--cchhhCC-----C-CCCceEEEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEE
Confidence 44443 3322221 1 2322233345578888642 244566655 668998553
No 48
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=85.62 E-value=2.6 Score=38.93 Aligned_cols=96 Identities=16% Similarity=0.212 Sum_probs=54.0
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-.|+|+|.|.|. +...|+.+ + .++|||+.... .++.+.+++ ++.|.- .+..++
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~------~~~~a~~~~-------~~~~~~----~d~~~~ 97 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDGSPE------LAAEASRRL-------GRPVRT----MLFHQL 97 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEESCHH------HHHHHHHHH-------TSCCEE----CCGGGC
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECCCHH------HHHHHHHhc-------CCceEE----eeeccC
Confidence 3479999999885 45556655 2 38999986432 233333332 444321 222222
Q ss_pred CCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 404 TPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
. .++..=+|-|...|||++++ ....+|+.+ +.|+|.-++++.
T Consensus 98 ~------~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 98 D------AIDAYDAVWAHACLLHVPRD------ELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp C------CCSCEEEEEECSCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred C------CCCcEEEEEecCchhhcCHH------HHHHHHHHHHHhcCCCcEEEEE
Confidence 1 12333355566789998742 234566655 668998666554
No 49
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=85.45 E-value=6.7 Score=36.18 Aligned_cols=110 Identities=14% Similarity=0.081 Sum_probs=62.0
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 394 (587)
|.+.+...+.-+|+|+|.|.|. +...|+.+ .-++|||+.... .++.+.+++. ..+ ..+|
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-----~~~v~~vD~s~~------~~~~a~~~~~----~~~-~~~~- 101 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH-----CKRLTVIDVMPR------AIGRACQRTK----RWS-HISW- 101 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSH----HHHHHGGG-----EEEEEEEESCHH------HHHHHHHHTT----TCS-SEEE-
T ss_pred HHHHcccCCCCcEEEEcCCCCH----HHHHHHHc-----CCEEEEEECCHH------HHHHHHHhcc----cCC-CeEE-
Confidence 3344555677899999999984 45556655 148999996432 2333333222 222 3344
Q ss_pred EeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 395 AVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 395 ~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+..+..++.+ ++..=+|-|...|||+++. .....+|+.+ +.|+|.-++++.
T Consensus 102 -~~~d~~~~~~------~~~fD~v~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 102 -AATDILQFST------AELFDLIVVAEVLYYLEDM-----TQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp -EECCTTTCCC------SCCEEEEEEESCGGGSSSH-----HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -EEcchhhCCC------CCCccEEEEccHHHhCCCH-----HHHHHHHHHHHHHcCCCCEEEEE
Confidence 3344443321 2333355556789999762 1233455544 678998666553
No 50
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=84.92 E-value=5.8 Score=39.23 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=59.7
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--eEEEEeeCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--FEFHAVPSKT 400 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~V~~~~ 400 (587)
+.-+|+|+|.|.|. +...||.+ ..|..++|||+.... .++. ..+.++..|++ .+|.. .+.
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~------~~~~----a~~~~~~~~~~~~v~~~~--~d~ 179 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYDPE------ALDG----ATRLAAGHALAGQITLHR--QDA 179 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESCHH------HHHH----HHHHHTTSTTGGGEEEEE--CCG
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECCHH------HHHH----HHHHHHhcCCCCceEEEE--Cch
Confidence 34579999999883 33444322 235679999996432 2232 33344556665 55543 333
Q ss_pred CCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 401 SLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 401 e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.++. .. +..=+|-|...+||+++.. ....+|+.+ +.|+|.-++++.
T Consensus 180 ~~~~-----~~-~~fD~v~~~~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 180 WKLD-----TR-EGYDLLTSNGLNIYEPDDA-----RVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp GGCC-----CC-SCEEEEECCSSGGGCCCHH-----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCC-----cc-CCeEEEEECChhhhcCCHH-----HHHHHHHHHHHhcCCCeEEEEE
Confidence 3222 11 3333444566789987631 223466665 568998776663
No 51
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=84.52 E-value=7.1 Score=36.64 Aligned_cols=101 Identities=16% Similarity=0.054 Sum_probs=54.3
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVT 404 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~ 404 (587)
-.|+|+|.|.|. +...|+. +..++|||+.... .++.+.+++ +..+..-....+..+..++.
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~v~~~~~d~~~~~ 128 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDISES------ALAKANETY----GSSPKAEYFSFVKEDVFTWR 128 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSCHH------HHHHHHHHH----TTSGGGGGEEEECCCTTTCC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECCHH------HHHHHHHHh----hccCCCcceEEEECchhcCC
Confidence 499999999884 3335554 3468999986532 233333332 22222111223333443332
Q ss_pred CCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHH-hcCCcEEEEE
Q 007853 405 PSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVK-SLNPKLVTVV 456 (587)
Q Consensus 405 ~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr-~L~PkVVtlv 456 (587)
+. +..=+|-|...|||++++ .+..+|+.++ .|+|.-.+++
T Consensus 129 ~~------~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 129 PT------ELFDLIFDYVFFCAIEPE------MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CS------SCEEEEEEESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEE
T ss_pred CC------CCeeEEEEChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEE
Confidence 21 112244455678998642 3456777665 5899866544
No 52
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=84.44 E-value=6.1 Score=39.08 Aligned_cols=135 Identities=12% Similarity=0.049 Sum_probs=68.7
Q ss_pred HHHHhCCcchhhhHHhhHHHHhh----hc-cCCeeEEEecccCC---ccchHHHHHHHhcCCCCCCeEEEEeecCCCchh
Q 007853 296 ILFEVCPCFKFGFMAANGAIIEA----FK-GEKRVHIIDFDINQ---GSQYITLIQTIASLPGNRPHLRLTGVDDPESVQ 367 (587)
Q Consensus 296 ~f~e~sP~~kfa~~tANqAILEA----~~-g~~~VHIIDfdI~~---G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~ 367 (587)
.+.++.|-+. ....+|+..++. +. ....-+|+|+|.|. |. +..+++.. . |..|||+|+....
T Consensus 46 ~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~--~----p~~~v~~vD~sp~-- 115 (274)
T 2qe6_A 46 YACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSV--N----PDARVVYVDIDPM-- 115 (274)
T ss_dssp HHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHH--C----TTCEEEEEESSHH--
T ss_pred HHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHh--C----CCCEEEEEECChH--
Confidence 3444455433 123444544432 22 22234899999998 73 33333322 1 3469999996432
Q ss_pred hcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCC--Cc----cccCCCceEEEEeccccccCCCCcccccchHHHH
Q 007853 368 RLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTP--SM----LECRPGEALVVNFAFQLHHMPDESVSTVNQRDQL 441 (587)
Q Consensus 368 ~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~--~~----L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~ 441 (587)
.|+...+++. . .-..+| +..+..+... .. -.+..+...+|-+...|||++|+. ...+
T Consensus 116 ----~l~~Ar~~~~----~-~~~v~~--~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~------~~~~ 178 (274)
T 2qe6_A 116 ----VLTHGRALLA----K-DPNTAV--FTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDV------VDRV 178 (274)
T ss_dssp ----HHHHHHHHHT----T-CTTEEE--EECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTT------HHHH
T ss_pred ----HHHHHHHhcC----C-CCCeEE--EEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHH------HHHH
Confidence 2343444431 1 112333 3333332210 00 012223566777888999998842 4567
Q ss_pred HHHHHh-cCCcEE-EEEe
Q 007853 442 LRMVKS-LNPKLV-TVVE 457 (587)
Q Consensus 442 L~~Vr~-L~PkVV-tlvE 457 (587)
|+.++. |+|.-. ++.+
T Consensus 179 l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 179 VGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHhCCCCcEEEEEE
Confidence 777755 999743 4444
No 53
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=84.14 E-value=4.2 Score=40.95 Aligned_cols=109 Identities=10% Similarity=0.131 Sum_probs=58.3
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-------eEEEEe
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-------FEFHAV 396 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-------FeF~~V 396 (587)
.-+|+|+|.|.|.- +..++.+.+ -++||||.+.. .|+.+.++.. ..++. ++|...
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~~------~l~~A~~~~~----~~~~~~~~~~~~~~f~~~ 110 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDAD------AIARGNERYN----KLNSGIKTKYYKFDYIQE 110 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCHH------HHHHHHHHHH----HHCC----CCCEEEEEEC
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCHH------HHHHHHHHHH----hccccccccccccchhhh
Confidence 46899999999852 222333322 37999997543 3555554432 23432 455543
Q ss_pred eCCCCCCCCCccc--cCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 397 PSKTSLVTPSMLE--CRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 397 ~~~~e~l~~~~L~--~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
.... +.....|. ...+..=+|-|++.||++.+.. .+..+|+.+ +.|+|.-+.++
T Consensus 111 d~~~-d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~-----~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 111 TIRS-DTFVSSVREVFYFGKFNIIDWQFAIHYSFHPR-----HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp CTTS-SSHHHHHHTTCCSSCEEEEEEESCGGGTCSTT-----THHHHHHHHHHHEEEEEEEEE
T ss_pred hccc-chhhhhhhccccCCCeeEEEECchHHHhCCHH-----HHHHHHHHHHHHcCCCCEEEE
Confidence 2211 00001111 1223344777889999975421 235677766 66999865544
No 54
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=83.90 E-value=6.9 Score=37.12 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=62.6
Q ss_pred hHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCce
Q 007853 312 NGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391 (587)
Q Consensus 312 NqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpF 391 (587)
-..|++.+...+.-.|+|+|.|.|. +...|+.+ ++. ++|||+.... .++.+.+++. +-..
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s~~------~~~~a~~~~~------~~~~ 92 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLSER------MLTEAKRKTT------SPVV 92 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCHH------HHHHHHHHCC------CTTE
T ss_pred HHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECCHH------HHHHHHHhhc------cCCe
Confidence 3456666665567789999999984 45556655 222 8999986432 1222222211 2334
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+|.. .+.+++ ....+..=+|-|...|||+++ ...+|+.+ +-|+|.-++++.
T Consensus 93 ~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 93 CYEQ--KAIEDI-----AIEPDAYNVVLSSLALHYIAS--------FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEE--CCGGGC-----CCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEE--cchhhC-----CCCCCCeEEEEEchhhhhhhh--------HHHHHHHHHHHcCCCcEEEEE
Confidence 4443 222222 222343445555668999854 34566665 568998666554
No 55
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=83.27 E-value=4.2 Score=41.48 Aligned_cols=123 Identities=12% Similarity=0.140 Sum_probs=72.4
Q ss_pred chhHHHHHHHHHHhCCcchhhhHHhhHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCch
Q 007853 287 SSDRLAAMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESV 366 (587)
Q Consensus 287 ~~~~l~A~q~f~e~sP~~kfa~~tANqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~ 366 (587)
..+.+..+..||. +|++.+.. --.|+|+|.|.|. |--.++. .+|..+++++|-...
T Consensus 112 TreRLp~lD~fY~--------------~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DId~~- 167 (281)
T 3lcv_B 112 TRERLPHLDEFYR--------------ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDIDAR- 167 (281)
T ss_dssp HHHHGGGHHHHHH--------------HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEESBHH-
T ss_pred HHHHhHhHHHHHH--------------HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeCCHH-
Confidence 4556666666654 34445433 3378999988773 1111111 347889999986432
Q ss_pred hhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHH
Q 007853 367 QRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVK 446 (587)
Q Consensus 367 ~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr 446 (587)
.-+.+.+++..+|+++.|........ .+ -.+.+++.+| ..+|||.++ .+...++.+.
T Consensus 168 ---------~le~a~~~l~~~g~~~~~~v~D~~~~-----~p-~~~~DvaL~l--kti~~Le~q------~kg~g~~ll~ 224 (281)
T 3lcv_B 168 ---------LVGFVDEALTRLNVPHRTNVADLLED-----RL-DEPADVTLLL--KTLPCLETQ------QRGSGWEVID 224 (281)
T ss_dssp ---------HHHHHHHHHHHTTCCEEEEECCTTTS-----CC-CSCCSEEEET--TCHHHHHHH------STTHHHHHHH
T ss_pred ---------HHHHHHHHHHhcCCCceEEEeeeccc-----CC-CCCcchHHHH--HHHHHhhhh------hhHHHHHHHH
Confidence 23344556678899988865422111 11 1223444444 467888553 2345669999
Q ss_pred hcCCcEEEEE
Q 007853 447 SLNPKLVTVV 456 (587)
Q Consensus 447 ~L~PkVVtlv 456 (587)
.|+|..|+|.
T Consensus 225 aL~~~~vvVS 234 (281)
T 3lcv_B 225 IVNSPNIVVT 234 (281)
T ss_dssp HSSCSEEEEE
T ss_pred HhCCCCEEEe
Confidence 9999988764
No 56
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=83.07 E-value=7.4 Score=38.51 Aligned_cols=110 Identities=7% Similarity=0.083 Sum_probs=58.1
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF 393 (587)
.|++.+.-.+.-+|+|+|.|.|.- ...|+.+.| .++|||+.... .++... +.++..|++-..
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~----~~~la~~~~----~~v~gvD~s~~------~~~~a~----~~~~~~~~~~~v 142 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTT----MRRAVERFD----VNVIGLTLSKN------QHARCE----QVLASIDTNRSR 142 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHH----HHHHHHHHC----CEEEEEESCHH------HHHHHH----HHHHTSCCSSCE
T ss_pred HHHHhcCCCCcCEEEEEcccchHH----HHHHHHHCC----CEEEEEECCHH------HHHHHH----HHHHhcCCCCce
Confidence 455555545566899999988753 334444322 28999986432 233222 334455664223
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEE
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTV 455 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtl 455 (587)
..+..+..++. ..=++| -|...|||++++ + ...+|+.+ +-|+|.-.++
T Consensus 143 ~~~~~d~~~~~------~~fD~v--~~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 143 QVLLQGWEDFA------EPVDRI--VSIEAFEHFGHE-----N-YDDFFKRCFNIMPADGRMT 191 (318)
T ss_dssp EEEESCGGGCC------CCCSEE--EEESCGGGTCGG-----G-HHHHHHHHHHHSCTTCEEE
T ss_pred EEEECChHHCC------CCcCEE--EEeChHHhcCHH-----H-HHHHHHHHHHhcCCCcEEE
Confidence 33333333331 111233 344578898652 2 34556554 6789984443
No 57
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=82.85 E-value=1.6 Score=40.68 Aligned_cols=116 Identities=16% Similarity=0.236 Sum_probs=61.5
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEF 393 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF 393 (587)
.++.+...+.-+|+|+|.|.|.-- ..|+.+ -|..++|||+.... .++.+.++..+-++..+++ .+|
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~~~----~~la~~---~p~~~v~gvD~s~~------~l~~~~~~a~~~~~~~~~~~v~~ 85 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGKHP----YKVARQ---NPSRLVVALDADKS------RMEKISAKAAAKPAKGGLPNLLY 85 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCHHH----HHHHHH---CTTEEEEEEESCGG------GGHHHHHHHTSCGGGTCCTTEEE
T ss_pred HHHHhhccCCCEEEEecCCCCHHH----HHHHHH---CCCCEEEEEECCHH------HHHHHHHHHHHhhhhcCCCceEE
Confidence 344444556678999999998533 334443 25579999997543 2333333333333345663 444
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEecc-cc--ccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAF-QL--HHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f-~L--h~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+..+.+++... -.. +.+.++..+ .+ ||++|. ..+|+.+ +-|+|.-.+++.
T Consensus 86 --~~~d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~~~~--------~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 86 --LWATAERLPPL---SGV-GELHVLMPWGSLLRGVLGSS--------PEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp --EECCSTTCCSC---CCE-EEEEEESCCHHHHHHHHTSS--------SHHHHHHHHTEEEEEEEEEE
T ss_pred --EecchhhCCCC---CCC-CEEEEEccchhhhhhhhccH--------HHHHHHHHHHcCCCcEEEEE
Confidence 33444443321 111 333333322 23 366653 2455555 678998777664
No 58
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=82.30 E-value=8.5 Score=39.30 Aligned_cols=115 Identities=16% Similarity=0.115 Sum_probs=64.4
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
++|++.+...+.-+|+|+|.|.|. |...++.++ .-++|||+.... + ....+.++..|++=.
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~~-------~----~~a~~~~~~~~l~~~ 100 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEASTM-------A----QHAEVLVKSNNLTDR 100 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECSTH-------H----HHHHHHHHHTTCTTT
T ss_pred HHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHHH-------H----HHHHHHHHHcCCCCc
Confidence 567777765566699999998885 444555552 349999986421 2 223334445566423
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEEe
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVE 457 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlvE 457 (587)
.+.+..+.+++... ..=+.|+. ...++|+..+. ..+.+...-+-|+|.-+++..
T Consensus 101 v~~~~~d~~~~~~~----~~~D~Ivs--~~~~~~~~~~~-----~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 101 IVVIPGKVEEVSLP----EQVDIIIS--EPMGYMLFNER-----MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EEEEESCTTTCCCS----SCEEEEEE--CCCBTTBTTTS-----HHHHHHHGGGGEEEEEEEESC
T ss_pred EEEEEcchhhCCCC----CceeEEEE--eCchhcCChHH-----HHHHHHHHHhhcCCCeEEEEe
Confidence 34455555544321 01123333 33466765432 234555555778999777643
No 59
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=82.25 E-value=1.6 Score=42.64 Aligned_cols=125 Identities=10% Similarity=0.060 Sum_probs=62.8
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC-Cce
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG-VPF 391 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg-vpF 391 (587)
..|++.+...+.-+|+|+|.|.|. +...|+.+ |+ ++|||+.... .++.+.+++.+.....+ ..+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASDK------MLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCHH------HHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCHH------HHHHHHHhhhhccccccccee
Confidence 334445544556789999999985 33445554 22 9999997532 23444333321111000 122
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEec-cccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFA-FQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~-f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.|. ..+..++.. .+ ..++..=+|-|. ..|||+++.... ...+..+|+.+ +.|+|.-++++.
T Consensus 112 ~~~--~~d~~~~~~-~~-~~~~~fD~V~~~g~~l~~~~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 112 VIE--EANWLTLDK-DV-PAGDGFDAVICLGNSFAHLPDSKGD-QSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EEE--ECCGGGHHH-HS-CCTTCEEEEEECTTCGGGSCCSSSS-SHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEe--ecChhhCcc-cc-ccCCCeEEEEEcChHHhhcCccccC-HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 232 222222110 00 223334455555 789999872211 12345666655 568998655544
No 60
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=81.95 E-value=6.5 Score=39.85 Aligned_cols=98 Identities=16% Similarity=0.247 Sum_probs=53.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+.-+|+|+|-|.|. +...|+.+. |.+++|+++.| .. + +.|+... ..+|.. .+..+
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~~------~--------~~a~~~~-~v~~~~--~d~~~ 242 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDRP-QV------V--------ENLSGSN-NLTYVG--GDMFT 242 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-HH------H--------TTCCCBT-TEEEEE--CCTTT
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeCH-HH------H--------hhcccCC-CcEEEe--ccccC
Confidence 44689999999984 455555542 45799999972 21 1 1122221 144433 22211
Q ss_pred CCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCC----cEEEEEecc
Q 007853 403 VTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNP----KLVTVVEQD 459 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~P----kVVtlvEqE 459 (587)
.+. .-+ +|-+...|||++|+ ....+|+.+ +.|+| ..++++|.-
T Consensus 243 ----~~p--~~D--~v~~~~~lh~~~d~------~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 243 ----SIP--NAD--AVLLKYILHNWTDK------DCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp ----CCC--CCS--EEEEESCGGGSCHH------HHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred ----CCC--Ccc--EEEeehhhccCCHH------HHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 011 123 33355678998763 223667766 56899 356666643
No 61
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=81.71 E-value=7 Score=40.49 Aligned_cols=115 Identities=11% Similarity=0.113 Sum_probs=63.9
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
++|++.....+.-.|+|+|.|.| .+...|+.+ |. -++|||+.. .. + +...+.++..|++=.
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~~------~----~~a~~~~~~~~~~~~ 113 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-KM------A----DHARALVKANNLDHI 113 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-TT------H----HHHHHHHHHTTCTTT
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-HH------H----HHHHHHHHHcCCCCe
Confidence 34444444445568999999998 334445555 21 299999975 31 2 233445566777632
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.+.+..+.+++... ..=++|+.+ ...|.+..+ ..++.+|+.+ +-|+|.-+++..
T Consensus 114 v~~~~~d~~~~~~~----~~~D~Iv~~--~~~~~l~~e-----~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 114 VEVIEGSVEDISLP----EKVDVIISE--WMGYFLLRE-----SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EEEEESCGGGCCCS----SCEEEEEEC--CCBTTBTTT-----CTHHHHHHHHHHHEEEEEEEESS
T ss_pred EEEEECchhhcCcC----CcceEEEEc--Chhhcccch-----HHHHHHHHHHHhhCCCCeEEEEe
Confidence 33444444443321 111244433 334444432 2356788887 889999777654
No 62
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=81.56 E-value=2.4 Score=43.95 Aligned_cols=109 Identities=22% Similarity=0.255 Sum_probs=62.8
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF 393 (587)
.|++.+.-.+.-.|+|+|.|.|. ++..|+.+ | .++|||+.... ..+.|+..|++..-
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~~--------------~~~~a~~~~~~~~~ 154 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSSG--------------VAAKAREKGIRVRT 154 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCHH--------------HHHHHHTTTCCEEC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCHH--------------HHHHHHHcCCCcce
Confidence 44555544456789999999997 55666654 2 29999987432 22345555665431
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.. ...-....+...++..=+|-+...|||++| ...+|+.+ +-|+|.-+++++
T Consensus 155 ~~----~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 155 DF----FEKATADDVRRTEGPANVIYAANTLCHIPY--------VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp SC----CSHHHHHHHHHHHCCEEEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ee----echhhHhhcccCCCCEEEEEECChHHhcCC--------HHHHHHHHHHHcCCCeEEEEE
Confidence 10 000001112222343445666678999975 34566665 568998666665
No 63
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=81.54 E-value=7.5 Score=38.15 Aligned_cols=108 Identities=13% Similarity=0.095 Sum_probs=58.4
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHc---CCceEEEEeeC
Q 007853 322 EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEAL---GVPFEFHAVPS 398 (587)
Q Consensus 322 ~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~l---gvpFeF~~V~~ 398 (587)
.+.-+|+|+|.|.|. +...|+.+- ++..++|||+.... .++.+.++ ++.. .-..+|. ..
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~~------~~~~a~~~----~~~~~~~~~~v~~~--~~ 96 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSAT------MIKTAEVI----KEGSPDTYKNVSFK--IS 96 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCHH------HHHHHHHH----HHHCC-CCTTEEEE--EC
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCHH------HHHHHHHH----HHhccCCCCceEEE--Ec
Confidence 356789999999884 334444321 14568999997532 23333333 2333 2344444 34
Q ss_pred CCCCCCCCc-cccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 399 KTSLVTPSM-LECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 399 ~~e~l~~~~-L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
+.+++.... ..+..+..=+|-|...|||+ + ...+|+.+ +.|+|.-++++
T Consensus 97 d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 97 SSDDFKFLGADSVDKQKIDMITAVECAHWF-D--------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CTTCCGGGCTTTTTSSCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEEE
T ss_pred CHHhCCccccccccCCCeeEEeHhhHHHHh-C--------HHHHHHHHHHhcCCCcEEEE
Confidence 444433211 01122445566677789998 4 23555554 66899865544
No 64
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=80.93 E-value=10 Score=36.74 Aligned_cols=105 Identities=13% Similarity=0.139 Sum_probs=56.7
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF 393 (587)
.+++.+...+.-.|+|+|.|.|.-.. .|+. + ..++|||+.... .++...+++ -++. |
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~----~l~~-~----~~~v~gvD~s~~------~~~~a~~~~------~~~~--~ 104 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTE----KIAQ-S----GAEVLGTDNAAT------MIEKARQNY------PHLH--F 104 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHH----HHHH-T----TCEEEEEESCHH------HHHHHHHHC------TTSC--E
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHH----HHHh-C----CCeEEEEECCHH------HHHHHHhhC------CCCE--E
Confidence 45555554555689999999885433 3443 2 248999986432 223222221 1333 3
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHH-HHhcCCcEEEEEe
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRM-VKSLNPKLVTVVE 457 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~-Vr~L~PkVVtlvE 457 (587)
.. .+.+++. . ++..=+|-|...|||++| + ..+|+. .+-|+|.-.+++.
T Consensus 105 ~~--~d~~~~~-----~-~~~fD~v~~~~~l~~~~d-------~-~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 105 DV--ADARNFR-----V-DKPLDAVFSNAMLHWVKE-------P-EAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp EE--CCTTTCC-----C-SSCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEEE
T ss_pred EE--CChhhCC-----c-CCCcCEEEEcchhhhCcC-------H-HHHHHHHHHhcCCCcEEEEE
Confidence 32 2333322 1 233334445677899865 2 345554 4678998655553
No 65
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=80.75 E-value=11 Score=35.11 Aligned_cols=109 Identities=16% Similarity=0.124 Sum_probs=57.1
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
..|++.+...+.-+|+|+|.|.|. +...|+.+ +. -++|||+.... .++.+.+++. . -.++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s~~------~~~~a~~~~~----~--~~~~ 92 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLSEK------MLARARAAGP----D--TGIT 92 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHH------HHHHHHHTSC----S--SSEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCCHH------HHHHHHHhcc----c--CCce
Confidence 456666665556689999999885 34455555 22 18999986432 1222222111 0 1233
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
|.. .+..++ ...++..=+|-+...|||+++ ...+|+.+ +.|+|.-++++
T Consensus 93 ~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 93 YER--ADLDKL-----HLPQDSFDLAYSSLALHYVED--------VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp EEE--CCGGGC-----CCCTTCEEEEEEESCGGGCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEE--cChhhc-----cCCCCCceEEEEeccccccch--------HHHHHHHHHHhcCcCcEEEE
Confidence 432 222222 122232223345567899854 23566655 66899855544
No 66
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=80.54 E-value=12 Score=34.52 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=52.4
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-+|+|+|.|.|. +...|+.+ ++ ++|||+.... .++.+.++ ++..+...+|.. .+..++
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s~~------~~~~a~~~----~~~~~~~~~~~~--~d~~~~ 97 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDISED------MIRKAREY----AKSRESNVEFIV--GDARKL 97 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCHH------HHHHHHHH----HHHTTCCCEEEE--CCTTSC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECCHH------HHHHHHHH----HHhcCCCceEEE--CchhcC
Confidence 4589999999883 34555555 23 9999986432 23333333 333444444433 333332
Q ss_pred CCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 404 TPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
. +.-..=+.|+.|..+.+|+.+ + ...+|+.+ +.|+|.-++++
T Consensus 98 ~---~~~~~~D~v~~~~~~~~~~~~-------~-~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 98 S---FEDKTFDYVIFIDSIVHFEPL-------E-LNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp C---SCTTCEEEEEEESCGGGCCHH-------H-HHHHHHHHHHHEEEEEEEEE
T ss_pred C---CCCCcEEEEEEcCchHhCCHH-------H-HHHHHHHHHHHcCCCcEEEE
Confidence 2 111112455655554455542 2 24555554 66899855544
No 67
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=79.72 E-value=8.8 Score=35.61 Aligned_cols=94 Identities=15% Similarity=0.151 Sum_probs=51.7
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVT 404 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~ 404 (587)
-+|+|+|.|.|. +...|+.+ ++ ++|||+.... .++...+++. -..+|. ..+.+++
T Consensus 44 ~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~~~~a~~~~~-------~~v~~~--~~d~~~~- 98 (250)
T 2p7i_A 44 GNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEE------AISHAQGRLK-------DGITYI--HSRFEDA- 98 (250)
T ss_dssp SCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHH------HHHHHHHHSC-------SCEEEE--ESCGGGC-
T ss_pred CcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHH------HHHHHHHhhh-------CCeEEE--EccHHHc-
Confidence 469999999884 45566654 32 6999986432 1222222211 133343 3333322
Q ss_pred CCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHH--hcCCcEEEEE
Q 007853 405 PSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVK--SLNPKLVTVV 456 (587)
Q Consensus 405 ~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr--~L~PkVVtlv 456 (587)
..++..=+|-|...|||++| + ..+|+.++ -|+|.-.+++
T Consensus 99 -----~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 99 -----QLPRRYDNIVLTHVLEHIDD-------P-VALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp -----CCSSCEEEEEEESCGGGCSS-------H-HHHHHHHHHTTEEEEEEEEE
T ss_pred -----CcCCcccEEEEhhHHHhhcC-------H-HHHHHHHHHHhcCCCCEEEE
Confidence 11232335556678999975 2 46777765 6899755444
No 68
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=79.29 E-value=8.4 Score=39.06 Aligned_cols=143 Identities=16% Similarity=0.106 Sum_probs=76.6
Q ss_pred HHHHHHHhCCcchhhhHHhhHHHHhhh----ccCCe-eEEEecccCCccc--hHHHHHHHhcCCCCCCeEEEEeecCCCc
Q 007853 293 AMQILFEVCPCFKFGFMAANGAIIEAF----KGEKR-VHIIDFDINQGSQ--YITLIQTIASLPGNRPHLRLTGVDDPES 365 (587)
Q Consensus 293 A~q~f~e~sP~~kfa~~tANqAILEA~----~g~~~-VHIIDfdI~~G~Q--WpsLIqaLA~RpggPP~LRITgI~~p~~ 365 (587)
+-..+.++.|-++ ...-+|.+-|..+ .++.. =+|+|+|.|-|.. -..+.|.++ |..|||+|+....
T Consensus 44 ~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~sp~ 116 (277)
T 3giw_A 44 AGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDNDPI 116 (277)
T ss_dssp HHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECCHH
T ss_pred HHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCChH
Confidence 4455677788874 3345888877643 22323 3799999987542 233344442 4569999997543
Q ss_pred hhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCC----C--ccccCCCceEEEEeccccccCCCCcccccchHH
Q 007853 366 VQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTP----S--MLECRPGEALVVNFAFQLHHMPDESVSTVNQRD 439 (587)
Q Consensus 366 ~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~----~--~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd 439 (587)
. |+....+|.. .+ +-..+.|..+..++.. . .=.++.++.++|-+...||||+|+. .++.
T Consensus 117 m------La~Ar~~l~~----~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~----~p~~ 181 (277)
T 3giw_A 117 V------LTLSQGLLAS----TP-EGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED----DAVG 181 (277)
T ss_dssp H------HHTTHHHHCC----CS-SSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG----CHHH
T ss_pred H------HHHHHHHhcc----CC-CCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh----hHHH
Confidence 2 3333333321 11 1123344444443310 0 0013345655666777899998842 2333
Q ss_pred HHHHHHHhcCCcEE-EEEe
Q 007853 440 QLLRMVKSLNPKLV-TVVE 457 (587)
Q Consensus 440 ~~L~~Vr~L~PkVV-tlvE 457 (587)
.+=+..+.|+|.=+ ++.+
T Consensus 182 ~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 182 IVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp HHHHHHTTSCTTCEEEEEE
T ss_pred HHHHHHHhCCCCcEEEEEe
Confidence 33355577899844 4443
No 69
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=78.41 E-value=6.9 Score=36.41 Aligned_cols=103 Identities=11% Similarity=0.085 Sum_probs=56.5
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+.-+|+|+|.|.|.- ...|+.+ + .++|||+.... .++.+.++ +...++..+|.. .+..+
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~-~----~~~~~~D~s~~------~~~~a~~~----~~~~~~~~~~~~--~d~~~ 95 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK-F----KNTWAVDLSQE------MLSEAENK----FRSQGLKPRLAC--QDISN 95 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG-S----SEEEEECSCHH------HHHHHHHH----HHHTTCCCEEEC--CCGGG
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC-C----CcEEEEECCHH------HHHHHHHH----HhhcCCCeEEEe--ccccc
Confidence 456899999999863 3445554 2 37999986432 23333333 333454444432 22222
Q ss_pred CCCCccccCCCceEEEEecc-ccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 403 VTPSMLECRPGEALVVNFAF-QLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f-~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+. .. +..=+|-|.. .|||+++. .....+|+.+ +.|+|.-+++++
T Consensus 96 ~~-----~~-~~fD~v~~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 96 LN-----IN-RKFDLITCCLDSTNYIIDS-----DDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CC-----CS-CCEEEEEECTTGGGGCCSH-----HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CC-----cc-CCceEEEEcCccccccCCH-----HHHHHHHHHHHHhcCCCcEEEEE
Confidence 21 11 2222344555 78998642 1234566655 568998766664
No 70
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=76.79 E-value=6.7 Score=39.88 Aligned_cols=107 Identities=20% Similarity=0.305 Sum_probs=57.0
Q ss_pred HHHhhhc--cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCce
Q 007853 314 AIIEAFK--GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391 (587)
Q Consensus 314 AILEA~~--g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpF 391 (587)
.|++.+. =.+.-+|+|+|-|.|. +...|+.+- |.+++|+++.|... +.|+.+. ..
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~~~---------------~~a~~~~-~v 238 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQPQVV---------------GNLTGNE-NL 238 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECHHHH---------------SSCCCCS-SE
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccHHHH---------------hhcccCC-Cc
Confidence 4666551 1234589999999985 444455442 56799999864211 1111111 14
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCC----cEEEEEecc
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNP----KLVTVVEQD 459 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~P----kVVtlvEqE 459 (587)
+|.. .+..+ .+. .-++++ +...|||++|+ ....+|+.+ +.|+| -.++++|.-
T Consensus 239 ~~~~--~d~~~----~~~--~~D~v~--~~~vlh~~~d~------~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 239 NFVG--GDMFK----SIP--SADAVL--LKWVLHDWNDE------QSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp EEEE--CCTTT----CCC--CCSEEE--EESCGGGSCHH------HHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred EEEe--CccCC----CCC--CceEEE--EcccccCCCHH------HHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 4433 22222 111 123444 44568998763 233677766 56899 355666643
No 71
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=76.71 E-value=2.7 Score=40.85 Aligned_cols=101 Identities=13% Similarity=0.128 Sum_probs=59.7
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCC
Q 007853 326 HIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTP 405 (587)
Q Consensus 326 HIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~ 405 (587)
+|+|+|.|.| .|--.++.+ .|..+++|+|-... .++.+. +.|+..|+...+... ++.
T Consensus 52 ~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~~~------~leiar----~~~~~~g~~~~v~~~-----d~~- 108 (200)
T 3fzg_A 52 SILDFGCGFN----PLALYQWNE---NEKIIYHAYDIDRA------EIAFLS----SIIGKLKTTIKYRFL-----NKE- 108 (200)
T ss_dssp EEEEETCTTH----HHHHHHHCS---SCCCEEEEECSCHH------HHHHHH----HHHHHSCCSSEEEEE-----CCH-
T ss_pred eEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCCHH------HHHHHH----HHHHhcCCCccEEEe-----ccc-
Confidence 7899987765 444455544 35669999996432 244343 346778988555442 110
Q ss_pred CccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEEec
Q 007853 406 SMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQ 458 (587)
Q Consensus 406 ~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlvEq 458 (587)
...-++..=+|=....||+| ++ .+..+.+.++.|+|..|+|.=.
T Consensus 109 --~~~~~~~~DvVLa~k~LHlL-~~------~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 109 --SDVYKGTYDVVFLLKMLPVL-KQ------QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp --HHHTTSEEEEEEEETCHHHH-HH------TTCCHHHHHHTCEEEEEEEEEE
T ss_pred --ccCCCCCcChhhHhhHHHhh-hh------hHHHHHHHHHHhCCCCEEEEeC
Confidence 01222322233344468888 42 2335778999999998877543
No 72
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=76.43 E-value=25 Score=31.09 Aligned_cols=40 Identities=23% Similarity=0.337 Sum_probs=25.5
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
.+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|||+..
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~~ 77 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDLD 77 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEESC
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcCC
Confidence 44555422 44589999998875 34455554 2 389999864
No 73
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=75.71 E-value=11 Score=33.19 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=55.8
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 394 (587)
+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|||+.... .++.+.++ .-..+|.
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~------~~~~a~~~--------~~~v~~~ 65 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVI------ALKEVKEK--------FDSVITL 65 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHH------HHHHHHHH--------CTTSEEE
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHH------HHHHHHHh--------CCCcEEE
Confidence 4455555567789999999986 344555543 3 9999986432 12222222 1122332
Q ss_pred EeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 395 AVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 395 ~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
. .+ +....+..=+|-+...|||+++ ...+|+.+ +.|+|.-.+++
T Consensus 66 ~--~d--------~~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 66 S--DP--------KEIPDNSVDFILFANSFHDMDD--------KQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp S--SG--------GGSCTTCEEEEEEESCSTTCSC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred e--CC--------CCCCCCceEEEEEccchhcccC--------HHHHHHHHHHhcCCCCEEEE
Confidence 2 11 2333343444556677889854 23555544 67899755443
No 74
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=75.32 E-value=19 Score=33.96 Aligned_cols=101 Identities=12% Similarity=0.200 Sum_probs=54.5
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+.-+|+|+|.|.|.- ...|+.+ + .++|||+.... .++...+++ +...-.++|.. .+.++
T Consensus 39 ~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~--~d~~~ 97 (263)
T 2yqz_A 39 EEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDADAA------MLEVFRQKI----AGVDRKVQVVQ--ADARA 97 (263)
T ss_dssp SCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESCHH------HHHHHHHHT----TTSCTTEEEEE--SCTTS
T ss_pred CCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECCHH------HHHHHHHHh----hccCCceEEEE--ccccc
Confidence 456899999999863 2344544 2 38999986432 233333222 11223344543 33333
Q ss_pred CCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 403 VTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+. ..++..=+|-+...|||++| ...+|+.+ +-|+|.-.+++.
T Consensus 98 ~~-----~~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 98 IP-----LPDESVHGVIVVHLWHLVPD--------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CC-----SCTTCEEEEEEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-----CCCCCeeEEEECCchhhcCC--------HHHHHHHHHHHCCCCcEEEEE
Confidence 22 22333334445677899865 23455554 678998655444
No 75
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=74.89 E-value=5.4 Score=39.22 Aligned_cols=111 Identities=15% Similarity=0.129 Sum_probs=59.8
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC----
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG---- 388 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg---- 388 (587)
..+++.+..... .|+|+|.|.|. +...|+.+ + .++|||+.... .++.+.+++ ...+
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~------~~~~a~~~~----~~~~~~~~ 132 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELSTS------VLAAFRKRL----AEAPADVR 132 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESCHH------HHHHHHHHH----HTSCHHHH
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECCHH------HHHHHHHHH----hhcccccc
Confidence 344555544444 89999999987 44555555 2 47999996532 233343333 3333
Q ss_pred CceEEEEeeCCCCCCCCCccccCCCce-EEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 389 VPFEFHAVPSKTSLVTPSMLECRPGEA-LVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 389 vpFeF~~V~~~~e~l~~~~L~~~~gEa-LaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
..++|.. .+..++. . ++.. +||.+...+|++++ ..+..+|+.+ +.|+|.-.+++.
T Consensus 133 ~~v~~~~--~d~~~~~-----~-~~~fD~v~~~~~~~~~~~~------~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 133 DRCTLVQ--GDMSAFA-----L-DKRFGTVVISSGSINELDE------ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp TTEEEEE--CBTTBCC-----C-SCCEEEEEECHHHHTTSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEe--CchhcCC-----c-CCCcCEEEECCcccccCCH------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 2344443 3333322 1 2222 34433345676643 2345677766 568998666554
No 76
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=74.37 E-value=4.4 Score=40.71 Aligned_cols=180 Identities=17% Similarity=0.183 Sum_probs=99.1
Q ss_pred cCHHHHHHHHHHHHhcCCHHHH-HHHHHHHhhhcCCCCC-hhhHHHHHHHHHHHHHhhccCcccccccccCCCCchhHHH
Q 007853 215 RTLKQLLIDCAATLSDGNIEEA-TTIINELRQMVSIQGD-PPQRIAAYMVEGLAARMAASGKFLYKALKCKEPPSSDRLA 292 (587)
Q Consensus 215 ~~l~~LLl~CA~AV~~gd~~~A-~~lL~~L~~~aS~~Gd-~~QRLA~yFaeAL~aRl~~sg~~~y~~l~~~~~~~~~~l~ 292 (587)
...+.+..+++.+ .++...| ...=.+|.+..-..=. |. .+++.+++..... ..+....++..+.+.
T Consensus 24 ~~v~r~~~~~~~~--~~~~~~a~k~~k~~LH~i~ga~~~~~~-------~~~~l~~~~~~d~---~~~l~~H~STrerLp 91 (253)
T 3frh_A 24 DTVRRILTEEWGR--HKSPKQTVEAARTRLHGICGAYVTPES-------LKAAAAALSAGDV---KKALSLHASTKERLA 91 (253)
T ss_dssp HHHHHHHHHHHTT--CCCHHHHHHHHHHHHHHHHTTSCCHHH-------HHHHHHHHHTTCH---HHHHTTSHHHHHHGG
T ss_pred HHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhcCCcc-------HHHHHHHhccCCH---HHHHhhCCCHHHHhh
Confidence 4456666666554 5687777 5555567666433211 21 1223344432111 112222344566666
Q ss_pred HHHHHHHhCCcchhhhHHhhHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchH
Q 007853 293 AMQILFEVCPCFKFGFMAANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGG 372 (587)
Q Consensus 293 A~q~f~e~sP~~kfa~~tANqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~ 372 (587)
.+.-||. .|++. ..--.|+|+|.|.|. |--.+ + |..+++|+|-...
T Consensus 92 ~ld~fY~--------------~i~~~---~~p~~VLDlGCG~gp----Lal~~--~----~~~~y~a~DId~~------- 137 (253)
T 3frh_A 92 ELDTLYD--------------FIFSA---ETPRRVLDIACGLNP----LALYE--R----GIASVWGCDIHQG------- 137 (253)
T ss_dssp GHHHHHH--------------HHTSS---CCCSEEEEETCTTTH----HHHHH--T----TCSEEEEEESBHH-------
T ss_pred hHHHHHH--------------HHhcC---CCCCeEEEecCCccH----HHHHh--c----cCCeEEEEeCCHH-------
Confidence 6666664 23333 223389999998772 11111 1 6679999986432
Q ss_pred HHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcE
Q 007853 373 LQIIGLRLESLAEALGVPFEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKL 452 (587)
Q Consensus 373 L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkV 452 (587)
+-..+.+++...|+++.|......... +.- +.+++.++- .+|||.++ .+...++.+..|+|..
T Consensus 138 ---~i~~ar~~~~~~g~~~~~~v~D~~~~~-----~~~-~~DvvLllk--~lh~LE~q------~~~~~~~ll~aL~~~~ 200 (253)
T 3frh_A 138 ---LGDVITPFAREKDWDFTFALQDVLCAP-----PAE-AGDLALIFK--LLPLLERE------QAGSAMALLQSLNTPR 200 (253)
T ss_dssp ---HHHHHHHHHHHTTCEEEEEECCTTTSC-----CCC-BCSEEEEES--CHHHHHHH------STTHHHHHHHHCBCSE
T ss_pred ---HHHHHHHHHHhcCCCceEEEeecccCC-----CCC-CcchHHHHH--HHHHhhhh------chhhHHHHHHHhcCCC
Confidence 344556667788999888765322111 111 344555543 56887542 2346678999999997
Q ss_pred EEEEe
Q 007853 453 VTVVE 457 (587)
Q Consensus 453 VtlvE 457 (587)
|+|.=
T Consensus 201 vvVsf 205 (253)
T 3frh_A 201 MAVSF 205 (253)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77653
No 77
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=74.34 E-value=18 Score=35.64 Aligned_cols=116 Identities=14% Similarity=0.123 Sum_probs=58.6
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC--CceEEEEeeCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG--VPFEFHAVPSKT 400 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg--vpFeF~~V~~~~ 400 (587)
+.-+|+|+|.|.|.- ...|+.++ ..++|||+.... .++...+++.......+ .....+.+..+.
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s~~------~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~ 99 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIADV------SVKQCQQRYEDMKNRRDSEYIFSAEFITADS 99 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESCHH------HHHHHHHHHHHHHSSSCC-CCCEEEEEECCT
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCCHH------HHHHHHHHHHHhhhcccccccceEEEEEecc
Confidence 556899999998863 33444432 348999986432 34444444433211000 122334444444
Q ss_pred CCCCC-CccccCCCceEEEEeccccccC-CCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 401 SLVTP-SMLECRPGEALVVNFAFQLHHM-PDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 401 e~l~~-~~L~~~~gEaLaVN~~f~Lh~L-~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+++.. ..+.-.++..=+|-|.+.||++ .+. .....+|+.+ +.|+|.-++++.
T Consensus 100 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~-----~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 100 SKELLIDKFRDPQMCFDICSCQFVCHYSFESY-----EQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TTSCSTTTCSSTTCCEEEEEEETCGGGGGGSH-----HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccchhhhcccCCCCEEEEEEecchhhccCCH-----HHHHHHHHHHHHHhCCCcEEEEe
Confidence 44321 0111112223345556688887 331 1234667666 668998655543
No 78
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=74.02 E-value=21 Score=34.84 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=23.9
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+.-.|+|+|.|.|. +...||.+ | .++|||+.+.
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~S~ 100 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEISE 100 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECSCH
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEECCH
Confidence 45689999999884 34557766 3 3899999754
No 79
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=72.75 E-value=30 Score=31.48 Aligned_cols=106 Identities=17% Similarity=0.198 Sum_probs=58.5
Q ss_pred hHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCce
Q 007853 312 NGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPF 391 (587)
Q Consensus 312 NqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpF 391 (587)
...|++.+. .+.-+|+|+|.|.| .+...|+.+ + .++|||+.... ..+.|+....
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~-~----~~~~~~D~~~~--------------~~~~~~~~~~-- 75 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN-G----TRVSGIEAFPE--------------AAEQAKEKLD-- 75 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT-T----CEEEEEESSHH--------------HHHHHHTTSS--
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc-C----CeEEEEeCCHH--------------HHHHHHHhCC--
Confidence 345666665 55678999999988 355566766 2 58999986432 1223333222
Q ss_pred EEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 392 EFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 392 eF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
+| +..+..++. +...++..=+|-|...|||+++ + ..+|+.+ +-|+|.-.+++
T Consensus 76 ~~--~~~d~~~~~---~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 76 HV--VLGDIETMD---MPYEEEQFDCVIFGDVLEHLFD-------P-WAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp EE--EESCTTTCC---CCSCTTCEEEEEEESCGGGSSC-------H-HHHHHHTGGGEEEEEEEEE
T ss_pred cE--EEcchhhcC---CCCCCCccCEEEECChhhhcCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 23 333333211 1222233223345567889865 2 3566666 56788754444
No 80
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=72.74 E-value=13 Score=35.14 Aligned_cols=107 Identities=16% Similarity=0.136 Sum_probs=58.7
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF 393 (587)
.+++.+...+.-+|+|+|.|.|.--..|.+.+ |..++|||+.... .++...++ .-..+|
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~------~~~~a~~~--------~~~~~~ 82 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDDD------MLEKAADR--------LPNTNF 82 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCHH------HHHHHHHH--------STTSEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCHH------HHHHHHHh--------CCCcEE
Confidence 45555544455689999999987555555544 2347999986432 12222222 222344
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.. .+.+++. .++..=+|-|...|||++| ...+|+.+ +-|+|.-.+++.
T Consensus 83 ~~--~d~~~~~------~~~~fD~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 83 GK--ADLATWK------PAQKADLLYANAVFQWVPD--------HLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp EE--CCTTTCC------CSSCEEEEEEESCGGGSTT--------HHHHHHHHGGGEEEEEEEEEE
T ss_pred EE--CChhhcC------ccCCcCEEEEeCchhhCCC--------HHHHHHHHHHhcCCCeEEEEE
Confidence 33 3333322 1222334445667899864 34566655 778998555443
No 81
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=72.44 E-value=17 Score=37.01 Aligned_cols=106 Identities=13% Similarity=0.119 Sum_probs=58.1
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+.-.|+|+|.|.|. +...|+.+ +..+++||+... . ++ ...+.++..|++=....+..+.++
T Consensus 66 ~~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s~-~------l~----~a~~~~~~~~~~~~v~~~~~d~~~ 126 (349)
T 3q7e_A 66 KDKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECSS-I------SD----YAVKIVKANKLDHVVTIIKGKVEE 126 (349)
T ss_dssp TTCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECST-H------HH----HHHHHHHHTTCTTTEEEEESCTTT
T ss_pred CCCEEEEEeccchH----HHHHHHHC----CCCEEEEECcHH-H------HH----HHHHHHHHcCCCCcEEEEECcHHH
Confidence 33479999999984 45556665 235999999752 1 22 333445666776223334455554
Q ss_pred CCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 403 VTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+... -..=++|+.+++ .+++..+ ...+.+|+.+ |-|+|.-+++.+
T Consensus 127 ~~~~---~~~fD~Iis~~~--~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 127 VELP---VEKVDIIISEWM--GYCLFYE-----SMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCS---SSCEEEEEECCC--BBTBTBT-----CCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccCC---CCceEEEEEccc--cccccCc-----hhHHHHHHHHHHhCCCCCEEccc
Confidence 4211 011124444433 2333222 2356788777 779999777643
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=69.79 E-value=41 Score=31.52 Aligned_cols=110 Identities=17% Similarity=0.228 Sum_probs=57.0
Q ss_pred HhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEE
Q 007853 316 IEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHA 395 (587)
Q Consensus 316 LEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~ 395 (587)
++.....+.-+|+|+|.|.|. +...|+.+ | .++|||+.... .++.+.++ ++..|+..+|..
T Consensus 34 ~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s~~------~l~~a~~~----~~~~~~~v~~~~ 94 (252)
T 1wzn_A 34 FKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLHEE------MLRVARRK----AKERNLKIEFLQ 94 (252)
T ss_dssp HHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHHHHHHH----HHHTTCCCEEEE
T ss_pred HHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECCHH------HHHHHHHH----HHhcCCceEEEE
Confidence 333333345689999999985 33445554 2 38999996532 23333333 344566555543
Q ss_pred eeCCCCCCCCCccccCCCceEEEEecc-ccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEec
Q 007853 396 VPSKTSLVTPSMLECRPGEALVVNFAF-QLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVEQ 458 (587)
Q Consensus 396 V~~~~e~l~~~~L~~~~gEaLaVN~~f-~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvEq 458 (587)
.+..++.. ++..=+|-|.+ .+|+++. .....+|+.+ +.|+|.-+++++-
T Consensus 95 --~d~~~~~~------~~~fD~v~~~~~~~~~~~~------~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 95 --GDVLEIAF------KNEFDAVTMFFSTIMYFDE------EDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp --SCGGGCCC------CSCEEEEEECSSGGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CChhhccc------CCCccEEEEcCCchhcCCH------HHHHHHHHHHHHHcCCCeEEEEec
Confidence 33322211 12121222322 3344432 2345566655 6689998777763
No 83
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=69.77 E-value=22 Score=36.10 Aligned_cols=113 Identities=17% Similarity=0.119 Sum_probs=60.0
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
.+|++.+.-.+.-.|+|+|.|.|. |...|+.+ | ..+++||+... . ++.+. +.++..|+.=.
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s~-~------~~~a~----~~~~~~~~~~~ 114 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQSE-I------LYQAM----DIIRLNKLEDT 114 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESST-H------HHHHH----HHHHHTTCTTT
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChHH-H------HHHHH----HHHHHcCCCCc
Confidence 455555444455589999999984 44455555 2 24899999642 1 22222 33445555222
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEec-cccccCCCCcccccchHHHHHHHH-HhcCCcEEEE
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFA-FQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTV 455 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~-f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtl 455 (587)
...+..+.+++... -..=++|+.|.+ +.|++. ...+.+|+.+ +-|+|.-+++
T Consensus 115 i~~~~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~--------~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 115 ITLIKGKIEEVHLP---VEKVDVIISEWMGYFLLFE--------SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEESCTTTSCCS---CSCEEEEEECCCBTTBTTT--------CHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEeeHHHhcCC---CCcEEEEEEcCchhhccCH--------HHHHHHHHHHHhhcCCCcEEE
Confidence 33344555444211 011134555542 234432 2345677766 6789987665
No 84
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=69.57 E-value=17 Score=33.91 Aligned_cols=107 Identities=12% Similarity=0.155 Sum_probs=53.2
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--eEEEEeeCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--FEFHAVPSKTS 401 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~V~~~~e 401 (587)
.-+|+|+|.+.|.-=. .||.+- ++.-+||+|+.... .++.+ .+.++..|+. ++|.. .+..
T Consensus 59 ~~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~------~~~~a----~~~~~~~~~~~~v~~~~--~d~~ 120 (221)
T 3u81_A 59 PSLVLELGAYCGYSAV----RMARLL--QPGARLLTMEINPD------CAAIT----QQMLNFAGLQDKVTILN--GASQ 120 (221)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEESCHH------HHHHH----HHHHHHHTCGGGEEEEE--SCHH
T ss_pred CCEEEEECCCCCHHHH----HHHHhC--CCCCEEEEEeCChH------HHHHH----HHHHHHcCCCCceEEEE--CCHH
Confidence 3479999998885332 333321 23459999996432 23333 3344556764 55533 2221
Q ss_pred CCCCC---ccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEEec
Q 007853 402 LVTPS---MLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQ 458 (587)
Q Consensus 402 ~l~~~---~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlvEq 458 (587)
++-+. .....+=+.|+++.. .|+.+ +...++..++-|+|.-+++++.
T Consensus 121 ~~l~~~~~~~~~~~fD~V~~d~~--~~~~~--------~~~~~~~~~~~LkpgG~lv~~~ 170 (221)
T 3u81_A 121 DLIPQLKKKYDVDTLDMVFLDHW--KDRYL--------PDTLLLEKCGLLRKGTVLLADN 170 (221)
T ss_dssp HHGGGTTTTSCCCCCSEEEECSC--GGGHH--------HHHHHHHHTTCCCTTCEEEESC
T ss_pred HHHHHHHHhcCCCceEEEEEcCC--cccch--------HHHHHHHhccccCCCeEEEEeC
Confidence 11000 000011235554432 22211 1224666668899998888763
No 85
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=69.24 E-value=29 Score=31.44 Aligned_cols=103 Identities=10% Similarity=0.148 Sum_probs=54.0
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-+|+|+|.|.|.-...++ +. ++ .++|||+.... .++.+.++ ++..+..++|.. .+..++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s~~------~~~~a~~~----~~~~~~~~~~~~--~d~~~~ 83 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEISDL------QLKKAENF----SRENNFKLNISK--GDIRKL 83 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECCHH------HHHHHHHH----HHHHTCCCCEEE--CCTTSC
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECCHH------HHHHHHHH----HHhcCCceEEEE--CchhhC
Confidence 3589999998876544443 22 22 38999997542 23333333 333344444432 333332
Q ss_pred CCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 404 TPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
. ..++..=+|-|...|||++. .....+|+.+ +.|+|.-++++.
T Consensus 84 ~-----~~~~~fD~v~~~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 84 P-----FKDESMSFVYSYGTIFHMRK------NDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp C-----SCTTCEEEEEECSCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CCCCceeEEEEcChHHhCCH------HHHHHHHHHHHHHcCCCcEEEEE
Confidence 2 22232323445567888852 1234556554 678998655443
No 86
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=68.98 E-value=21 Score=31.54 Aligned_cols=112 Identities=12% Similarity=0.027 Sum_probs=59.2
Q ss_pred hHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-
Q 007853 312 NGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP- 390 (587)
Q Consensus 312 NqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp- 390 (587)
.+.+++.+.-.+.-+|+|+|.|.|. +...|+.+ ..++|||+.... .++.+ .+.++..|++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-----~~~v~~~D~~~~------~~~~a----~~~~~~~~~~~ 101 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-----VKSTTMADINRR------AIKLA----KENIKLNNLDN 101 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-----SSEEEEEESCHH------HHHHH----HHHHHHTTCTT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-----CCeEEEEECCHH------HHHHH----HHHHHHcCCCc
Confidence 3556666655566789999999884 34455555 238999986432 12322 3334455665
Q ss_pred --eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 391 --FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 391 --FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.+|.. .+..+..+ -..=+.|+.|. .+|+- ......+|+.+ +.|+|.-++++.
T Consensus 102 ~~~~~~~--~d~~~~~~----~~~~D~v~~~~--~~~~~-------~~~~~~~l~~~~~~L~~gG~l~~~ 156 (194)
T 1dus_A 102 YDIRVVH--SDLYENVK----DRKYNKIITNP--PIRAG-------KEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp SCEEEEE--CSTTTTCT----TSCEEEEEECC--CSTTC-------HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEEE--Cchhcccc----cCCceEEEECC--Ccccc-------hhHHHHHHHHHHHHcCCCCEEEEE
Confidence 55543 33322111 01113455443 33431 12234566554 668998665554
No 87
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=68.66 E-value=13 Score=40.16 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=66.1
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHH---HHHHHHHcCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLR---LESLAEALGV 389 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~r---L~~fA~~lgv 389 (587)
..|++.+.-...=+|+|+|.|.|. +.-.+|.+. +.-+++||+-.... ++.+.+. +.+.++..|+
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~---g~~kVvGIDiS~~~------lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAAT---NCKHHYGVEKADIP------AKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHC---CCSEEEEEECCHHH------HHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHC---CCCEEEEEeCCHHH------HHHHHHHHHHHHHHHHHhCC
Confidence 446666654555679999998884 233334332 22389999975421 2222222 2334667776
Q ss_pred c-eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEE
Q 007853 390 P-FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVV 456 (587)
Q Consensus 390 p-FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlv 456 (587)
. -.+..+..+..++.... .+..-.+|++|..+ + .+ +.+..|....+.|+|.-.+++
T Consensus 230 ~~~rVefi~GD~~~lp~~d-~~~~aDVVf~Nn~~--F-~p-------dl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWRE-RIANTSVIFVNNFA--F-GP-------EVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp CCCEEEEEECCTTSHHHHH-HHHTCSEEEECCTT--C-CH-------HHHHHHHHHHTTSCTTCEEEE
T ss_pred CCCCeEEEECcccCCcccc-ccCCccEEEEcccc--c-Cc-------hHHHHHHHHHHcCCCCcEEEE
Confidence 2 34555555554432211 11223477777643 2 11 345667777889999865554
No 88
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=68.46 E-value=35 Score=34.32 Aligned_cols=114 Identities=19% Similarity=0.112 Sum_probs=58.2
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF 393 (587)
+|++...-.+.-+|+|+|-|.|. |...++.+. .-+++||+.. .. ++ ...+.++..|++=..
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~~------~~----~a~~~~~~~~~~~~i 89 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-SI------IE----MAKELVELNGFSDKI 89 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-TH------HH----HHHHHHHHTTCTTTE
T ss_pred HHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-HH------HH----HHHHHHHHcCCCCCE
Confidence 34443333334589999999984 334555542 2489999965 21 22 223344556664223
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
..+..+.+++... ...=++|+.+.+ .+++..+. ..+.+|+.+ +-|+|.-+++.
T Consensus 90 ~~~~~d~~~~~~~---~~~~D~Ivs~~~--~~~l~~~~-----~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 90 TLLRGKLEDVHLP---FPKVDIIISEWM--GYFLLYES-----MMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EEEESCTTTSCCS---SSCEEEEEECCC--BTTBSTTC-----CHHHHHHHHHHHEEEEEEEES
T ss_pred EEEECchhhccCC---CCcccEEEEeCc--hhhcccHH-----HHHHHHHHHHhhcCCCeEEEE
Confidence 3344555444211 011124444432 23333321 245677665 67899877653
No 89
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=68.34 E-value=12 Score=34.54 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=23.9
Q ss_pred HHhhhcc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 315 IIEAFKG-EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 315 ILEA~~g-~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
|++.+.. .+.-+|+|+|.|.|.- ...|+ .++|||+...
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~----~~~l~--------~~v~~~D~s~ 96 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRL----ASSIR--------NPVHCFDLAS 96 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHH----HHHCC--------SCEEEEESSC
T ss_pred HHHHHhccCCCCeEEEECCcCCHH----HHHhh--------ccEEEEeCCC
Confidence 4554442 3446899999998863 22332 4899998643
No 90
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=67.81 E-value=13 Score=34.58 Aligned_cols=33 Identities=9% Similarity=0.173 Sum_probs=22.7
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+.-+|+|+|.|.|.- ...||.+ | .++|||+.+.
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~-g----~~V~gvD~S~ 54 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ-G----YHVVGAELSE 54 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH-C----CEEEEEEECH
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC-C----CeEEEEeCCH
Confidence 445899999988843 3445655 2 3899999653
No 91
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=67.66 E-value=14 Score=33.54 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=56.8
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC-ceEEEEeeCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV-PFEFHAVPSKTS 401 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv-pFeF~~V~~~~e 401 (587)
+.-+|+|+|.|.|.- ...++.+. .-++|||+.... .++.+. +-++..|+ ..+| +..+..
T Consensus 44 ~~~~vLDlgcG~G~~----~~~~~~~~----~~~v~~vD~~~~------~~~~a~----~~~~~~~~~~v~~--~~~d~~ 103 (189)
T 3p9n_A 44 TGLAVLDLYAGSGAL----GLEALSRG----AASVLFVESDQR------SAAVIA----RNIEALGLSGATL--RRGAVA 103 (189)
T ss_dssp TTCEEEEETCTTCHH----HHHHHHTT----CSEEEEEECCHH------HHHHHH----HHHHHHTCSCEEE--EESCHH
T ss_pred CCCEEEEeCCCcCHH----HHHHHHCC----CCeEEEEECCHH------HHHHHH----HHHHHcCCCceEE--EEccHH
Confidence 334799999988842 22233342 348999996432 233333 33445566 2444 333322
Q ss_pred CCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHh---cCCcEEEEEeccCCC
Q 007853 402 LVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKS---LNPKLVTVVEQDMNT 462 (587)
Q Consensus 402 ~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~---L~PkVVtlvEqEan~ 462 (587)
++... +.-..=+.++.|..+ |+.. .....+|..++. |+|.-+++++.+...
T Consensus 104 ~~~~~-~~~~~fD~i~~~~p~--~~~~-------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 104 AVVAA-GTTSPVDLVLADPPY--NVDS-------ADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp HHHHH-CCSSCCSEEEECCCT--TSCH-------HHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred HHHhh-ccCCCccEEEECCCC--Ccch-------hhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 21100 001112466666543 3321 234567777764 999988888766543
No 92
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=66.96 E-value=25 Score=33.05 Aligned_cols=103 Identities=18% Similarity=0.160 Sum_probs=54.2
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC-CceEEEEeeCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG-VPFEFHAVPSKTS 401 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg-vpFeF~~V~~~~e 401 (587)
+.-.|+|+|.|.|. +...|+.+. ..++|||+.... .++.+.+++ +..| ...+|. ..+..
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~------~~~~a~~~~----~~~~~~~~~~~--~~d~~ 138 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITED------FLVQAKTYL----GEEGKRVRNYF--CCGLQ 138 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHH------HHHHHHHHT----GGGGGGEEEEE--ECCGG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHH------HHHHHHHHh----hhcCCceEEEE--EcChh
Confidence 35689999998885 444555543 238999986432 233333332 2221 223443 33332
Q ss_pred CCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 402 LVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 402 ~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
++. ..++..=+|-|...|||+++. .+..+|+.+ +-|+|.-++++
T Consensus 139 ~~~-----~~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 139 DFT-----PEPDSYDVIWIQWVIGHLTDQ------HLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp GCC-----CCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred hcC-----CCCCCEEEEEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEEE
Confidence 222 122222234455678999762 234566655 66899855443
No 93
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=66.93 E-value=14 Score=39.76 Aligned_cols=115 Identities=16% Similarity=0.113 Sum_probs=64.0
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceE
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFE 392 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFe 392 (587)
.+|++.+...+.-+|+|+|.|.|. +...|+.+ +..+||||+.+. .+ +...+.++..|+.=.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s~-------~l----~~A~~~~~~~gl~~~ 208 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAST-------MA----QHAEVLVKSNNLTDR 208 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECHH-------HH----HHHHHHHHHTTCTTT
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcHH-------HH----HHHHHHHHHcCCCCc
Confidence 456666655555699999999885 44456654 335999998632 12 233344556677423
Q ss_pred EEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEEe
Q 007853 393 FHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVE 457 (587)
Q Consensus 393 F~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlvE 457 (587)
.+.+..+.+++... ..=++|+.| ..++|+.++ ...+.+....+-|+|.-+++.+
T Consensus 209 v~~~~~d~~~~~~~----~~fD~Ivs~--~~~~~~~~e-----~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 209 IVVIPGKVEEVSLP----EQVDIIISE--PMGYMLFNE-----RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EEEEESCTTTCCCS----SCEEEEECC--CCHHHHTCH-----HHHHHHHHGGGGEEEEEEEESC
T ss_pred EEEEECchhhCccC----CCeEEEEEe--CchHhcCcH-----HHHHHHHHHHHhcCCCCEEEEE
Confidence 34444555543211 111234433 334555443 2244555555788999777654
No 94
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=66.06 E-value=48 Score=30.57 Aligned_cols=21 Identities=19% Similarity=0.131 Sum_probs=16.7
Q ss_pred hhhhhHHHHHHhCCCccccCC
Q 007853 524 ELAGKWRARMTMAGFTSCPMS 544 (587)
Q Consensus 524 E~~~~Wr~Rm~~AGF~~vplS 544 (587)
-+...|+..++.+||+.+.+.
T Consensus 166 ~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 166 FSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHCCCeEEEEe
Confidence 356789999999999887654
No 95
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=65.25 E-value=14 Score=35.29 Aligned_cols=98 Identities=18% Similarity=0.210 Sum_probs=55.6
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.... .++.+.+++. + .+|. ..+..++
T Consensus 51 ~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~------~~~~a~~~~~------~--~~~~--~~d~~~~ 105 (263)
T 3pfg_A 51 AASLLDVACGTGM----HLRHLADS--FG---TVEGLELSAD------MLAIARRRNP------D--AVLH--HGDMRDF 105 (263)
T ss_dssp CCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESCHH------HHHHHHHHCT------T--SEEE--ECCTTTC
T ss_pred CCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECCHH------HHHHHHhhCC------C--CEEE--ECChHHC
Confidence 3579999999984 55566665 22 7999986432 2332222211 2 3333 3333332
Q ss_pred CCCccccCCCceEEEEecc-ccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 404 TPSMLECRPGEALVVNFAF-QLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f-~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.. ++..=+|-|.+ .|||+++. .....+|+.+ +.|+|.-+++++
T Consensus 106 ~~------~~~fD~v~~~~~~l~~~~~~-----~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 106 SL------GRRFSAVTCMFSSIGHLAGQ-----AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CC------SCCEEEEEECTTGGGGSCHH-----HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred Cc------cCCcCEEEEcCchhhhcCCH-----HHHHHHHHHHHHhcCCCcEEEEE
Confidence 21 23333455565 89998642 1244566655 568999888776
No 96
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=64.17 E-value=7.9 Score=38.57 Aligned_cols=43 Identities=14% Similarity=-0.053 Sum_probs=29.5
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
..|++.+.-.+.-+|+|+|.|.|. +...||.+ + -+||||+...
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S~ 77 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFSQ 77 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESCH
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECCH
Confidence 345566655556789999999885 44556655 2 2899999653
No 97
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=64.10 E-value=24 Score=30.90 Aligned_cols=102 Identities=9% Similarity=0.108 Sum_probs=54.0
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEF 393 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF 393 (587)
|++.+.-.+.-+|+|+|.|.|. +...|+. +..++|||+.... .++. ..+.++..|++ .+|
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~------~~~~----a~~~~~~~~~~~~~~ 87 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDG------AIEV----TKQNLAKFNIKNCQI 87 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHH------HHHH----HHHHHHHTTCCSEEE
T ss_pred HHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHH------HHHH----HHHHHHHcCCCcEEE
Confidence 4444444455689999999986 3344444 3469999986432 1232 33334556663 444
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEE
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVV 456 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlv 456 (587)
. ..+..+ .+.-..=+.++.+.. .....+|+.++.+ |.-.+++
T Consensus 88 ~--~~d~~~----~~~~~~~D~i~~~~~--------------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 88 I--KGRAED----VLDKLEFNKAFIGGT--------------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp E--ESCHHH----HGGGCCCSEEEECSC--------------SCHHHHHHHHHHT-TCCEEEE
T ss_pred E--ECCccc----cccCCCCcEEEECCc--------------ccHHHHHHHHhhC-CCCEEEE
Confidence 3 332221 011111234444432 1245789999888 8644443
No 98
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=63.51 E-value=52 Score=30.35 Aligned_cols=108 Identities=17% Similarity=0.172 Sum_probs=57.6
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 394 (587)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+.... .++.+.++ ++..+...+|.
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~------~~~~a~~~----~~~~~~~~~~~ 84 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEE------MLEIAQEK----AMETNRHVDFW 84 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHH------HHHHHHHH----HHHTTCCCEEE
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHH------HHHHHHHh----hhhcCCceEEE
Confidence 44444332 479999999885 44456655 48999986432 23333333 33345445554
Q ss_pred EeeCCCCCCCCCccccCCCceEEEEecc-ccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 395 AVPSKTSLVTPSMLECRPGEALVVNFAF-QLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 395 ~V~~~~e~l~~~~L~~~~gEaLaVN~~f-~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.. +..++. .. +..=+|-|.+ .+||+++. .....+|+.+ +-|+|.-+++++
T Consensus 85 ~~--d~~~~~-----~~-~~fD~v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 85 VQ--DMRELE-----LP-EPVDAITILCDSLNYLQTE-----ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp EC--CGGGCC-----CS-SCEEEEEECTTGGGGCCSH-----HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ec--ChhhcC-----CC-CCcCEEEEeCCchhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 32 222221 11 2222233333 68888542 2234566655 668998777664
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=63.16 E-value=51 Score=28.80 Aligned_cols=45 Identities=13% Similarity=0.128 Sum_probs=30.8
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
..+++.+.-...-+|+|+|.|.| .+...|+.+. |..++|||+...
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~~ 59 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEISE 59 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSCH
T ss_pred HHHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCCH
Confidence 34555555556678999999887 3445555553 568999998643
No 100
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=58.67 E-value=29 Score=31.57 Aligned_cols=45 Identities=27% Similarity=0.505 Sum_probs=33.0
Q ss_pred HhhHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 310 AANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 310 tANqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
.....|++.+...+.-+|+|+|.|.|. +...|+.+ + .++|||+..
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s 83 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR-G----IEAVGVDGD 83 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT-T----CEEEEEESC
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC-C----CEEEEEcCC
Confidence 345667777776666899999999983 55666666 2 289999864
No 101
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=57.53 E-value=70 Score=30.48 Aligned_cols=109 Identities=15% Similarity=0.123 Sum_probs=56.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+.-+|+|+|.|.|.--.. |+.++ ..++|||+.... .++.+.+ -++..|+.-..+.+..+..+
T Consensus 64 ~~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~~------~~~~a~~----~~~~~~~~~~v~~~~~d~~~ 125 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAEV------SINDARV----RARNMKRRFKVFFRAQDSYG 125 (298)
T ss_dssp TTCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCHH------HHHHHHH----HHHTSCCSSEEEEEESCTTT
T ss_pred CCCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCHH------HHHHHHH----HHHhcCCCccEEEEECCccc
Confidence 345899999999854333 44332 348999996532 2333333 34445664444445554443
Q ss_pred CCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 403 VTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+... .++..=+|-|.+.|||+... ......+|+.+ +-|+|.-.+++.
T Consensus 126 ~~~~----~~~~fD~v~~~~~l~~~~~~----~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 126 RHMD----LGKEFDVISSQFSFHYAFST----SESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp SCCC----CSSCEEEEEEESCGGGGGSS----HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccC----CCCCcCEEEECchhhhhcCC----HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3210 12222233444567874211 12234566655 668998665544
No 102
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=57.05 E-value=53 Score=29.86 Aligned_cols=41 Identities=15% Similarity=0.230 Sum_probs=26.6
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+++.+.-.+.-+|+|+|.|.|..-.. |+.+ + -++|+|+...
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~~----la~~-~----~~v~~vD~~~ 109 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTAI----LAHL-V----QHVCSVERIK 109 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHH----HHHH-S----SEEEEEESCH
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHH----HHHh-C----CEEEEEecCH
Confidence 45555555667899999998864333 3333 2 4899998643
No 103
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=57.04 E-value=9.2 Score=37.79 Aligned_cols=35 Identities=26% Similarity=0.331 Sum_probs=23.3
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+.-.|+|+|.|.|. +...|+.+- |..+||||+...
T Consensus 46 ~~~~VLDiGCG~G~----~~~~la~~~---~~~~v~gvDis~ 80 (292)
T 3g07_A 46 RGRDVLDLGCNVGH----LTLSIACKW---GPSRMVGLDIDS 80 (292)
T ss_dssp TTSEEEEESCTTCH----HHHHHHHHT---CCSEEEEEESCH
T ss_pred CCCcEEEeCCCCCH----HHHHHHHHc---CCCEEEEECCCH
Confidence 34579999999983 344455543 224999999754
No 104
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=55.01 E-value=77 Score=28.74 Aligned_cols=44 Identities=11% Similarity=0.206 Sum_probs=28.8
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.+++.+.-.+.-.|+|+|.|.|. +...|+.+. |..++|||+...
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~~---~~~~v~~vD~s~ 74 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSAS----VSIEASNLM---PNGRIFALERNP 74 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCH----HHHHHHHHC---TTSEEEEEECCH
T ss_pred HHHHHcCCCCCCEEEEECCCCCH----HHHHHHHHC---CCCEEEEEeCCH
Confidence 45555555566789999999886 233344431 456999999643
No 105
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=55.00 E-value=49 Score=34.63 Aligned_cols=100 Identities=14% Similarity=0.164 Sum_probs=54.5
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCC
Q 007853 326 HIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTP 405 (587)
Q Consensus 326 HIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~ 405 (587)
+|+|+|-|.| +.++ +|.|.|. -|++||+.... .....+.++..|+.=....|..+.+++..
T Consensus 86 ~VLDvG~GtG--iLs~---~Aa~aGA---~~V~ave~s~~-----------~~~a~~~~~~n~~~~~i~~i~~~~~~~~l 146 (376)
T 4hc4_A 86 TVLDVGAGTG--ILSI---FCAQAGA---RRVYAVEASAI-----------WQQAREVVRFNGLEDRVHVLPGPVETVEL 146 (376)
T ss_dssp EEEEETCTTS--HHHH---HHHHTTC---SEEEEEECSTT-----------HHHHHHHHHHTTCTTTEEEEESCTTTCCC
T ss_pred EEEEeCCCcc--HHHH---HHHHhCC---CEEEEEeChHH-----------HHHHHHHHHHcCCCceEEEEeeeeeeecC
Confidence 5888888777 3343 4555442 28999985421 12233456666776556667777776643
Q ss_pred CccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEE
Q 007853 406 SMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTV 455 (587)
Q Consensus 406 ~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtl 455 (587)
. +.+=+|-+...-+.|..|+ ..+.+|... |-|+|.-+++
T Consensus 147 p------e~~DvivsE~~~~~l~~e~-----~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 147 P------EQVDAIVSEWMGYGLLHES-----MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp S------SCEEEEECCCCBTTBTTTC-----SHHHHHHHHHHHEEEEEEEE
T ss_pred C------ccccEEEeecccccccccc-----hhhhHHHHHHhhCCCCceEC
Confidence 2 1122222322223344443 345677666 5678876554
No 106
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=54.74 E-value=52 Score=29.59 Aligned_cols=34 Identities=26% Similarity=0.371 Sum_probs=21.3
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
-.|+|+|.|.|.- ...|+.+-+ |.-++|||+...
T Consensus 24 ~~vLDlGcG~G~~----~~~l~~~~~--~~~~v~~vD~s~ 57 (197)
T 3eey_A 24 DTVVDATCGNGND----TAFLASLVG--ENGRVFGFDIQD 57 (197)
T ss_dssp CEEEESCCTTSHH----HHHHHHHHC--TTCEEEEECSCH
T ss_pred CEEEEcCCCCCHH----HHHHHHHhC--CCCEEEEEECCH
Confidence 4799999999843 333343311 223999998643
No 107
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=53.65 E-value=15 Score=34.83 Aligned_cols=113 Identities=13% Similarity=0.143 Sum_probs=56.1
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEEEEeeCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEFHAVPSKTS 401 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~V~~~~e 401 (587)
+.-.|+|+|.|.|.-. ..||.+. |..+++||+.... .++. ..+-++..|++ ++| +..+..
T Consensus 34 ~~~~vLDiGcG~G~~~----~~lA~~~---p~~~v~giD~s~~------~l~~----a~~~~~~~~l~nv~~--~~~Da~ 94 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASL----VAMAKDR---PEQDFLGIEVHSP------GVGA----CLASAHEEGLSNLRV--MCHDAV 94 (218)
T ss_dssp CCCEEEEESCTTCHHH----HHHHHHC---TTSEEEEECSCHH------HHHH----HHHHHHHTTCSSEEE--ECSCHH
T ss_pred CCCeEEEEeeeChHHH----HHHHHHC---CCCeEEEEEecHH------HHHH----HHHHHHHhCCCcEEE--EECCHH
Confidence 4457999999988543 3444432 4568999997532 2332 23345566764 444 333322
Q ss_pred CCCCCccccCCC--ceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEec
Q 007853 402 LVTPSMLECRPG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVEQ 458 (587)
Q Consensus 402 ~l~~~~L~~~~g--EaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvEq 458 (587)
++-+.. +.++ +.|++|+..-.++.........+ ..+|+.+ +-|+|.-++++.-
T Consensus 95 ~~l~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~~--~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 95 EVLHKM--IPDNSLRMVQLFFPDPWHKARHNKRRIVQ--VPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp HHHHHH--SCTTCEEEEEEESCCCCCSGGGGGGSSCS--HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHH--cCCCChheEEEeCCCCccchhhhhhhhhh--HHHHHHHHHHcCCCcEEEEEe
Confidence 210000 1223 34555543332222110000001 2577777 5599998877663
No 108
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=52.68 E-value=72 Score=28.87 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=41.0
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+.-+|+|+|.|.|. +...|+.+ |+ -++|||+.... .++.+ .+-++..|+..+| +..+..+
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~~~------~~~~a----~~~~~~~~~~~~~--~~~d~~~ 108 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVDKE------AVDVL----IENLGEFKGKFKV--FIGDVSE 108 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESCHH------HHHHH----HHHTGGGTTSEEE--EESCGGG
T ss_pred CcCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECCHH------HHHHH----HHHHHHcCCCEEE--EECchHH
Confidence 34589999999986 44455555 21 28999986432 12222 2334455664444 4444433
Q ss_pred CCCCccccCCCceEEEEecc
Q 007853 403 VTPSMLECRPGEALVVNFAF 422 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f 422 (587)
+. . .=++|+.|..|
T Consensus 109 ~~-~-----~~D~v~~~~p~ 122 (207)
T 1wy7_A 109 FN-S-----RVDIVIMNPPF 122 (207)
T ss_dssp CC-C-----CCSEEEECCCC
T ss_pred cC-C-----CCCEEEEcCCC
Confidence 32 1 22477777664
No 109
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=51.95 E-value=36 Score=30.98 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=51.1
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 394 (587)
+++.+.. +.-.|+|+|.|.|. +...| + .-++|||+.... .++...+++ -++ +|
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l----~---~~~v~~vD~s~~------~~~~a~~~~------~~~--~~- 81 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL----P---YPQKVGVEPSEA------MLAVGRRRA------PEA--TW- 81 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC----C---CSEEEEECCCHH------HHHHHHHHC------TTS--EE-
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC----C---CCeEEEEeCCHH------HHHHHHHhC------CCc--EE-
Confidence 4444433 45689999999884 22223 1 128999986432 123222222 122 33
Q ss_pred EeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEE
Q 007853 395 AVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVV 456 (587)
Q Consensus 395 ~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlv 456 (587)
+..+.+++ ...++..=+|-+...|||+++ + ..+|+.+ +-|+|.-.+++
T Consensus 82 -~~~d~~~~-----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 82 -VRAWGEAL-----PFPGESFDVVLLFTTLEFVED-------V-ERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp -ECCCTTSC-----CSCSSCEEEEEEESCTTTCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred -EEcccccC-----CCCCCcEEEEEEcChhhhcCC-------H-HHHHHHHHHHcCCCCEEEE
Confidence 22333332 222232223445567899864 2 3555554 67899854443
No 110
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=51.93 E-value=1.3e+02 Score=26.86 Aligned_cols=98 Identities=28% Similarity=0.332 Sum_probs=50.2
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCC
Q 007853 326 HIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTP 405 (587)
Q Consensus 326 HIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~ 405 (587)
.|+|+|.|.|. +...|+.+ + .++|||+.... .++.+.++ ++..|+..+|.. .+..++.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s~~------~~~~a~~~----~~~~~~~~~~~~--~d~~~~~- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQSSV------GLAKAKQL----AQEKGVKITTVQ--SNLADFD- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSSHH------HHHHHHHH----HHHHTCCEEEEC--CBTTTBS-
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECCHH------HHHHHHHH----HHhcCCceEEEE--cChhhcC-
Confidence 89999998875 34556655 2 38999986432 23333333 334466555543 3333321
Q ss_pred CccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 406 SMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 406 ~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+.-..=+.|+.+ +.|++. .....+|+.+ +.|+|.-++++.
T Consensus 90 --~~~~~fD~v~~~----~~~~~~------~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 --IVADAWEGIVSI----FCHLPS------SLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp --CCTTTCSEEEEE----CCCCCH------HHHHHHHHHHHTTCCSSEEEEEE
T ss_pred --CCcCCccEEEEE----hhcCCH------HHHHHHHHHHHHhcCCCcEEEEE
Confidence 111111344432 234421 2244566655 568998665554
No 111
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=49.68 E-value=1e+02 Score=28.50 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=37.8
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--e
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--F 391 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--F 391 (587)
.+++.+.-.+.-.|+|+|.|.|. +...||.+ + .++|||+.... .++ ...+-++..|++ +
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~------~~~----~a~~~~~~~g~~~~v 106 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRAD------RIE----NIQKNIDTYGLSPRM 106 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHH----HHHHHHHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHH------HHH----HHHHHHHHcCCCCCE
Confidence 35555554555679999998874 33455555 2 48999986432 233 333446667886 5
Q ss_pred EEE
Q 007853 392 EFH 394 (587)
Q Consensus 392 eF~ 394 (587)
+|.
T Consensus 107 ~~~ 109 (204)
T 3njr_A 107 RAV 109 (204)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 112
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=49.46 E-value=78 Score=33.15 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=30.8
Q ss_pred CeeEEEecccCCcc----chHHHHHHHhcCC----CCCCeEEEEeecCCCch
Q 007853 323 KRVHIIDFDINQGS----QYITLIQTIASLP----GNRPHLRLTGVDDPESV 366 (587)
Q Consensus 323 ~~VHIIDfdI~~G~----QWpsLIqaLA~Rp----ggPP~LRITgI~~p~~~ 366 (587)
+.+.|.|+|.+.|. -+-.+|+++..+. ..||.++|.--|-|...
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ND 103 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSND 103 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccc
Confidence 36999999999994 3444555554432 24789999998877643
No 113
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=48.69 E-value=85 Score=28.78 Aligned_cols=110 Identities=17% Similarity=0.152 Sum_probs=54.7
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEEEEeeCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEFHAVPSKTS 401 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~V~~~~e 401 (587)
+.-.|+|+|.|.|.- ...||.+. |..++|||+.... .++.+.+ -++..|++ .+| +..+..
T Consensus 41 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~gvD~s~~------~l~~a~~----~~~~~~~~~v~~--~~~d~~ 101 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAF----VSGMAKQN---PDINYIGIDIQKS------VLSYALD----KVLEVGVPNIKL--LWVDGS 101 (214)
T ss_dssp CCCEEEEESCTTSHH----HHHHHHHC---TTSEEEEEESCHH------HHHHHHH----HHHHHCCSSEEE--EECCSS
T ss_pred CCCeEEEEccCcCHH----HHHHHHHC---CCCCEEEEEcCHH------HHHHHHH----HHHHcCCCCEEE--EeCCHH
Confidence 344699999998843 33444432 4569999996432 2333333 34455663 444 334443
Q ss_pred CCCCCccccCCCceEEEEeccccccCCCCcccccch----HHHHHHHHH-hcCCcEEEEEec
Q 007853 402 LVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQ----RDQLLRMVK-SLNPKLVTVVEQ 458 (587)
Q Consensus 402 ~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~----Rd~~L~~Vr-~L~PkVVtlvEq 458 (587)
++.. .+.-..=+.|++|+. .++... ...+ ...+|+.++ .|+|.-+++++-
T Consensus 102 ~~~~-~~~~~~~D~i~~~~~--~~~~~~----~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 102 DLTD-YFEDGEIDRLYLNFS--DPWPKK----RHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CGGG-TSCTTCCSEEEEESC--CCCCSG----GGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHh-hcCCCCCCEEEEECC--CCcccc----chhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 3220 011111146666642 111100 0001 145777664 599997776654
No 114
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=48.35 E-value=58 Score=31.50 Aligned_cols=21 Identities=10% Similarity=0.170 Sum_probs=16.3
Q ss_pred hhhhhHHHHHHhCCCccccCC
Q 007853 524 ELAGKWRARMTMAGFTSCPMS 544 (587)
Q Consensus 524 E~~~~Wr~Rm~~AGF~~vplS 544 (587)
-+.+.|+..|..+||+.+.+.
T Consensus 234 ~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 234 VSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp CCHHHHHHHHHHTTEEEEEEE
T ss_pred CCHHHHHHHHHHcCCeEEEee
Confidence 355789999999999876543
No 115
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=47.96 E-value=59 Score=29.38 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=52.4
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEEEEeeCCCCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEFHAVPSKTSLV 403 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~V~~~~e~l 403 (587)
-+|+|+|.|.|.--..|.+.+ |..++|||+.... .+ +.+.+.++..|++ .+| +..+..++
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~------~~----~~a~~~~~~~~~~~v~~--~~~d~~~~ 127 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGK------RV----RFLRQVQHELKLENIEP--VQSRVEEF 127 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHH------HH----HHHHHHHHHTTCSSEEE--EECCTTTS
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHH------HH----HHHHHHHHHcCCCCeEE--EecchhhC
Confidence 489999999997655554432 3459999996432 12 2333445566775 444 33444433
Q ss_pred CCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 404 TPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.+. ..=++++.|. + .+...+|+.+ +.|+|.-+++++
T Consensus 128 ~~~----~~~D~i~~~~------~--------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 128 PSE----PPFDGVISRA------F--------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CCC----SCEEEEECSC------S--------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred Ccc----CCcCEEEEec------c--------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 211 1112333221 1 1234566666 568998777666
No 116
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=47.32 E-value=43 Score=32.67 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=59.5
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEE
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEF 393 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF 393 (587)
.|++++.-.+.-+|+|+|-|.|. |...|+.++ .-++|||+... ++.+.|+..+ .-.+
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEid~--------------~~~~~~~~~~-~~~v 78 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIELDR--------------EMVENLKSIG-DERL 78 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECCCH--------------HHHHHHTTSC-CTTE
T ss_pred HHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEECCH--------------HHHHHHHhcc-CCCe
Confidence 35555554455689999998875 677888772 34899998542 2333333331 1124
Q ss_pred EEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHh--cCCcEEEEEecc
Q 007853 394 HAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKS--LNPKLVTVVEQD 459 (587)
Q Consensus 394 ~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~--L~PkVVtlvEqE 459 (587)
+.+..+..++....+. ..-.++-|..+.. + -..+.+.++. .-+..++++..|
T Consensus 79 ~~i~~D~~~~~~~~~~--~~~~vv~NlPy~i--------~----~~il~~ll~~~~~~~~~~~m~Qke 132 (249)
T 3ftd_A 79 EVINEDASKFPFCSLG--KELKVVGNLPYNV--------A----SLIIENTVYNKDCVPLAVFMVQKE 132 (249)
T ss_dssp EEECSCTTTCCGGGSC--SSEEEEEECCTTT--------H----HHHHHHHHHTGGGCSEEEEEEEHH
T ss_pred EEEEcchhhCChhHcc--CCcEEEEECchhc--------c----HHHHHHHHhcCCCCceEEEEEeHH
Confidence 4555555554433221 1225566654421 1 1245555554 356777777766
No 117
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=45.89 E-value=48 Score=34.37 Aligned_cols=120 Identities=15% Similarity=0.112 Sum_probs=62.5
Q ss_pred HhhHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC
Q 007853 310 AANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV 389 (587)
Q Consensus 310 tANqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv 389 (587)
.....+++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+.... .++.+.++ ++..|+
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s~~------al~~Ar~n----~~~ngl 271 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDESPM------AVASSRLN----VETNMP 271 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESCHH------HHHHHHHH----HHHHCG
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECcHH------HHHHHHHH----HHHcCC
Confidence 344567888877666799999999994 333444432 4569999996432 23333333 344454
Q ss_pred c----eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 390 P----FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 390 p----FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+ ++|.. .+..+. +.-..=+.|+.|-.| |+..... ......+|+.+ +-|+|.-.+++-
T Consensus 272 ~~~~~v~~~~--~D~~~~----~~~~~fD~Ii~nppf--h~~~~~~---~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 272 EALDRCEFMI--NNALSG----VEPFRFNAVLCNPPF--HQQHALT---DNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp GGGGGEEEEE--CSTTTT----CCTTCEEEEEECCCC------------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCceEEEEe--chhhcc----CCCCCeeEEEECCCc--ccCcccC---HHHHHHHHHHHHHhCCCCcEEEEE
Confidence 3 55544 322211 110111366666554 4321110 11234567666 458998665553
No 118
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=45.84 E-value=93 Score=28.27 Aligned_cols=45 Identities=4% Similarity=0.091 Sum_probs=29.5
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.+++.+.-.+.-+|+|+|.|.|.--..|.+.+ .|..++|+|+...
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~~ 112 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERIP 112 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESCH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCCH
Confidence 44555544455689999999886555555544 2345899998643
No 119
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=45.53 E-value=74 Score=30.67 Aligned_cols=113 Identities=16% Similarity=0.212 Sum_probs=56.5
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+..+|+|+|.|.|.--. .|+.+. |..++|||+.... .++.+.+ -++..|++ ..+.+..++.+
T Consensus 109 ~~~~vLDlG~GsG~~~~----~la~~~---~~~~v~~vD~s~~------~l~~a~~----n~~~~~~~-~v~~~~~d~~~ 170 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIAL----ALASER---PDCEIIAVDRMPD------AVSLAQR----NAQHLAIK-NIHILQSDWFS 170 (276)
T ss_dssp SCCEEEEETCTTSHHHH----HHHHHC---TTSEEEEECSSHH------HHHHHHH----HHHHHTCC-SEEEECCSTTG
T ss_pred CCCEEEEecCCccHHHH----HHHHhC---CCCEEEEEECCHH------HHHHHHH----HHHHcCCC-ceEEEEcchhh
Confidence 44689999999885333 333321 3469999986432 2333333 34456775 23334444332
Q ss_pred CCCCccccCCCceEEEEeccc-----------cccCCCCcccc----cchHHHHHHHH-HhcCCcEEEEEe
Q 007853 403 VTPSMLECRPGEALVVNFAFQ-----------LHHMPDESVST----VNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f~-----------Lh~L~desvs~----~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
. +.-..=+.|+.|..+. ++|-|...... ......+++.+ +-|+|.-+++++
T Consensus 171 ~----~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 171 A----LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp G----GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred h----cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1 1101124666664331 22333221100 01224556544 568998877776
No 120
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=45.09 E-value=16 Score=34.34 Aligned_cols=105 Identities=17% Similarity=0.260 Sum_probs=52.7
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.... .++...+++ . .-..+|. ..+..++
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~~------~~~~a~~~~----~--~~~~~~~--~~d~~~~ 113 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSKS------ALEIAAKEN----T--AANISYR--LLDGLVP 113 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCHH------HHHHHHHHS----C--CTTEEEE--ECCTTCH
T ss_pred CCeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCHH------HHHHHHHhC----c--ccCceEE--ECccccc
Confidence 3469999999874 34444443 22 8999986432 233332222 1 1133443 3333332
Q ss_pred CCCccccCCCc-eEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcE-EEEEec
Q 007853 404 TPSMLECRPGE-ALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKL-VTVVEQ 458 (587)
Q Consensus 404 ~~~~L~~~~gE-aLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkV-VtlvEq 458 (587)
... .....+. .-+|-+...+||++++ .+..+|+.+ +.|+|.- +++++.
T Consensus 114 ~~~-~~~~~~~~~d~v~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 114 EQA-AQIHSEIGDANIYMRTGFHHIPVE------KRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHH-HHHHHHHCSCEEEEESSSTTSCGG------GHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred ccc-cccccccCccEEEEcchhhcCCHH------HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 111 0111001 2345556678888652 245566655 6689974 456664
No 121
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=43.85 E-value=83 Score=30.96 Aligned_cols=42 Identities=10% Similarity=0.214 Sum_probs=28.1
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
+.|++++.-.+.-+|+|+|.|.|.--..|.+. ++ ++|||+..
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-----~~----~v~~vD~~ 59 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-----AK----KVVACELD 59 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-----SS----EEEEEESC
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-----CC----EEEEEECC
Confidence 34455554445568999999999765555543 21 89999864
No 122
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=43.49 E-value=56 Score=29.64 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=30.5
Q ss_pred HHhhHHHHhhhc--cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 309 MAANGAIIEAFK--GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 309 ~tANqAILEA~~--g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
....+.+++.+. -.+.-.|+|+|.|.|. +...|+.+ +..++|||+...
T Consensus 44 ~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~s~ 93 (205)
T 3grz_A 44 HQTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDISD 93 (205)
T ss_dssp HHHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEESCH
T ss_pred CccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEECCH
Confidence 344455555554 2345689999999983 33346655 235899998643
No 123
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=43.15 E-value=21 Score=39.05 Aligned_cols=84 Identities=21% Similarity=0.277 Sum_probs=50.5
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC-CceEEEEeeCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG-VPFEFHAVPSKTS 401 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg-vpFeF~~V~~~~e 401 (587)
+-+.|+|.|.|.|. |-..||.+ |. ++||||.... .++.. ...|+.-| +..+|.... .+
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-ga----~V~giD~~~~------~i~~a----~~~a~~~~~~~~~~~~~~--~~ 124 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-GA----TIVGIDFQQE------NINVC----RALAEENPDFAAEFRVGR--IE 124 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-TC----EEEEEESCHH------HHHHH----HHHHHTSTTSEEEEEECC--HH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-CC----EEEEECCCHH------HHHHH----HHHHHhcCCCceEEEECC--HH
Confidence 44789999999884 67778876 32 7999997542 12222 13455555 567776542 11
Q ss_pred CCCCCccccCCCceEEEEeccccccCCCC
Q 007853 402 LVTPSMLECRPGEALVVNFAFQLHHMPDE 430 (587)
Q Consensus 402 ~l~~~~L~~~~gEaLaVN~~f~Lh~L~de 430 (587)
++.. ...++..=||-|+-.|||++|.
T Consensus 125 ~~~~---~~~~~~fD~v~~~e~~ehv~~~ 150 (569)
T 4azs_A 125 EVIA---ALEEGEFDLAIGLSVFHHIVHL 150 (569)
T ss_dssp HHHH---HCCTTSCSEEEEESCHHHHHHH
T ss_pred HHhh---hccCCCccEEEECcchhcCCCH
Confidence 1100 1123334467778889999864
No 124
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=41.74 E-value=98 Score=30.13 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=50.7
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCCC
Q 007853 326 HIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVTP 405 (587)
Q Consensus 326 HIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~~ 405 (587)
.|+|+|.|.|. +...|+.+ + -++|||+.... .+ +.|+.. -.++|. ..+.+++
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~-~----~~v~gvD~s~~------ml--------~~a~~~-~~v~~~--~~~~e~~-- 93 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF-F----ERVHAVDPGEA------QI--------RQALRH-PRVTYA--VAPAEDT-- 93 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT-C----SEEEEEESCHH------HH--------HTCCCC-TTEEEE--ECCTTCC--
T ss_pred CEEEEcCCCCH----HHHHHHHh-C----CEEEEEeCcHH------hh--------hhhhhc-CCceee--hhhhhhh--
Confidence 58999999884 34456655 2 27999986432 11 123222 123333 3333333
Q ss_pred CccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEE-EEe
Q 007853 406 SMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVT-VVE 457 (587)
Q Consensus 406 ~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVt-lvE 457 (587)
.+.++..=+|-|...||++.. +.+|+.+ |-|+|.-++ ++.
T Consensus 94 ---~~~~~sfD~v~~~~~~h~~~~---------~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 94 ---GLPPASVDVAIAAQAMHWFDL---------DRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp ---CCCSSCEEEEEECSCCTTCCH---------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cccCCcccEEEEeeehhHhhH---------HHHHHHHHHHcCCCCEEEEEE
Confidence 334444445666777888732 3455554 668998654 443
No 125
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=41.44 E-value=40 Score=32.58 Aligned_cols=62 Identities=19% Similarity=0.261 Sum_probs=37.0
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEEEEeeCCC
Q 007853 322 EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEFHAVPSKT 400 (587)
Q Consensus 322 ~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~V~~~~ 400 (587)
...-+|+|+|.|.|.--..|-+.. |..+||+|+.... .+ ..+.+-++.+|+. .+| +..+.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~-------~~~~v~~vD~s~~------~~----~~a~~~~~~~~l~~v~~--~~~d~ 139 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVR-------PELELVLVDATRK------KV----AFVERAIEVLGLKGARA--LWGRA 139 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHC-------TTCEEEEEESCHH------HH----HHHHHHHHHHTCSSEEE--EECCH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHC-------CCCEEEEEECCHH------HH----HHHHHHHHHhCCCceEE--EECcH
Confidence 345689999999987544443331 4579999996532 12 2344456667875 444 44444
Q ss_pred CC
Q 007853 401 SL 402 (587)
Q Consensus 401 e~ 402 (587)
++
T Consensus 140 ~~ 141 (249)
T 3g89_A 140 EV 141 (249)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 126
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=41.21 E-value=90 Score=31.00 Aligned_cols=42 Identities=17% Similarity=0.176 Sum_probs=28.1
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
+.|++++.-.+.-.|+|+|.|.|.-- ..|+.+ + -++|||+..
T Consensus 32 ~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~-~----~~v~~vDi~ 73 (299)
T 2h1r_A 32 DKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL-A----KKVITIDID 73 (299)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT-S----SEEEEECSC
T ss_pred HHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc-C----CEEEEEECC
Confidence 34555554445558999999998743 455655 2 289999864
No 127
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=40.94 E-value=86 Score=27.77 Aligned_cols=31 Identities=19% Similarity=0.325 Sum_probs=21.7
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
-+|+|+|.|.|.- ...||.+ .-++|||+...
T Consensus 24 ~~vLDiGcG~G~~----~~~la~~-----~~~v~~vD~s~ 54 (185)
T 3mti_A 24 SIVVDATMGNGND----TAFLAGL-----SKKVYAFDVQE 54 (185)
T ss_dssp CEEEESCCTTSHH----HHHHHTT-----SSEEEEEESCH
T ss_pred CEEEEEcCCCCHH----HHHHHHh-----CCEEEEEECCH
Confidence 3699999998853 3345655 24899999643
No 128
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=39.86 E-value=1.3e+02 Score=29.58 Aligned_cols=112 Identities=14% Similarity=0.153 Sum_probs=56.4
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--eEEEEeeCCCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--FEFHAVPSKTSL 402 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~V~~~~e~ 402 (587)
-.|+|+|.|.|.- .-.|+.+ |..++|||+.... .++.+. +-++..|+. .+|. ..++.+
T Consensus 125 ~~vLDlG~GsG~~----~~~la~~----~~~~v~~vDis~~------al~~A~----~n~~~~~l~~~v~~~--~~D~~~ 184 (284)
T 1nv8_A 125 KTVADIGTGSGAI----GVSVAKF----SDAIVFATDVSSK------AVEIAR----KNAERHGVSDRFFVR--KGEFLE 184 (284)
T ss_dssp CEEEEESCTTSHH----HHHHHHH----SSCEEEEEESCHH------HHHHHH----HHHHHTTCTTSEEEE--ESSTTG
T ss_pred CEEEEEeCchhHH----HHHHHHC----CCCEEEEEECCHH------HHHHHH----HHHHHcCCCCceEEE--ECcchh
Confidence 4799999999853 3344444 3569999996532 233333 335566775 5554 344432
Q ss_pred CCCCccccCCCceEEEEeccccc--cCCCCcc--------cccchHHHHHHHH-HhcCCcEEEEEec
Q 007853 403 VTPSMLECRPGEALVVNFAFQLH--HMPDESV--------STVNQRDQLLRMV-KSLNPKLVTVVEQ 458 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f~Lh--~L~desv--------s~~n~Rd~~L~~V-r~L~PkVVtlvEq 458 (587)
..+. ...+-+.|+.|-.|.-. ++..+-. ...+..+-+-+.+ +.++|.-++++|-
T Consensus 185 ~~~~--~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 185 PFKE--KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp GGGG--GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred hccc--ccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 1111 11111577777433211 1211100 0011123333455 6788987777774
No 129
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=39.61 E-value=66 Score=30.66 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=33.3
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--eEEEE
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--FEFHA 395 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~ 395 (587)
.-.|+|+|.|.|.--. .||.+- |+..+||+|+.... .++ ...+.++..|++ .+|..
T Consensus 64 ~~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s~~------~~~----~a~~~~~~~g~~~~v~~~~ 121 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTI----WMAREL--PADGQLLTLEADAH------HAQ----VARENLQLAGVDQRVTLRE 121 (248)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECCHH------HHH----HHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECCHH------HHH----HHHHHHHHcCCCCcEEEEE
Confidence 3489999999885443 344432 33579999996432 222 333445566775 55543
No 130
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=39.32 E-value=1.1e+02 Score=30.27 Aligned_cols=46 Identities=9% Similarity=0.094 Sum_probs=28.7
Q ss_pred HHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 313 GAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 313 qAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+ +++..++|||+...
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~ 110 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYSR 110 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESCH
T ss_pred HHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECCH
Confidence 345555555555689999998884 33334433 12235899998643
No 131
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=38.50 E-value=2.3e+02 Score=25.77 Aligned_cols=100 Identities=16% Similarity=0.166 Sum_probs=52.8
Q ss_pred CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCC
Q 007853 322 EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTS 401 (587)
Q Consensus 322 ~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e 401 (587)
.+.-.|+|+|.|.|.--..|.+.. + ++|||+.... .++...+++ -..+|.. .+..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~------~---~v~~~D~s~~------~~~~a~~~~--------~~~~~~~--~d~~ 93 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF------G---DTAGLELSED------MLTHARKRL--------PDATLHQ--GDMR 93 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH------S---EEEEEESCHH------HHHHHHHHC--------TTCEEEE--CCTT
T ss_pred CCCCeEEEecccCCHHHHHHHHhC------C---cEEEEeCCHH------HHHHHHHhC--------CCCEEEE--CCHH
Confidence 345689999999985443333332 2 8999986432 122222221 1233332 3333
Q ss_pred CCCCCccccCCCce-EEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 402 LVTPSMLECRPGEA-LVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 402 ~l~~~~L~~~~gEa-LaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
++. . ++.. +||.+.-.|||+++. .....+|+.+ +.|+|.-.++++
T Consensus 94 ~~~-----~-~~~~D~v~~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 94 DFR-----L-GRKFSAVVSMFSSVGYLKTT-----EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp TCC-----C-SSCEEEEEECTTGGGGCCSH-----HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred Hcc-----c-CCCCcEEEEcCchHhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEE
Confidence 222 1 2222 344333378998652 1245566655 668999777765
No 132
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=38.36 E-value=57 Score=30.91 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=24.7
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
..=+|+|+|.|.| .+...||.+. |..++|||+..
T Consensus 24 ~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s 57 (225)
T 3p2e_A 24 FDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPV 57 (225)
T ss_dssp CSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSC
T ss_pred CCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCC
Confidence 3457999999888 3555666542 55899999975
No 133
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=38.27 E-value=1.6e+02 Score=30.76 Aligned_cols=108 Identities=11% Similarity=0.112 Sum_probs=58.9
Q ss_pred HhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEEE
Q 007853 316 IEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEFH 394 (587)
Q Consensus 316 LEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF~ 394 (587)
++.+.....-.|+|+|.|.|.--. .||.+ .-+++||+.... .++.+. +-|+..|++ .+|.
T Consensus 279 ~~~l~~~~~~~VLDlgcG~G~~~~----~la~~-----~~~V~gvD~s~~------al~~A~----~n~~~~~~~~v~f~ 339 (433)
T 1uwv_A 279 LEWLDVQPEDRVLDLFCGMGNFTL----PLATQ-----AASVVGVEGVPA------LVEKGQ----QNARLNGLQNVTFY 339 (433)
T ss_dssp HHHHTCCTTCEEEEESCTTTTTHH----HHHTT-----SSEEEEEESCHH------HHHHHH----HHHHHTTCCSEEEE
T ss_pred HHhhcCCCCCEEEECCCCCCHHHH----HHHhh-----CCEEEEEeCCHH------HHHHHH----HHHHHcCCCceEEE
Confidence 334433334579999999886443 34554 248999986432 233333 334566775 4554
Q ss_pred EeeCCCCCCCCC-ccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEEe
Q 007853 395 AVPSKTSLVTPS-MLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVE 457 (587)
Q Consensus 395 ~V~~~~e~l~~~-~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlvE 457 (587)
..+..+.-.. .+.-..=++|++|- |-. . .+.+++.+..++|+-++.+.
T Consensus 340 --~~d~~~~l~~~~~~~~~fD~Vv~dP-------Pr~-----g-~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 340 --HENLEEDVTKQPWAKNGFDKVLLDP-------ARA-----G-AAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp --ECCTTSCCSSSGGGTTCCSEEEECC-------CTT-----C-CHHHHHHHHHHCCSEEEEEE
T ss_pred --ECCHHHHhhhhhhhcCCCCEEEECC-------CCc-----c-HHHHHHHHHhcCCCeEEEEE
Confidence 3444332111 11111224666652 111 1 13688999999999888774
No 134
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=37.38 E-value=2.8e+02 Score=29.15 Aligned_cols=95 Identities=18% Similarity=0.232 Sum_probs=55.4
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLVT 404 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l~ 404 (587)
-.|+|++.|.|.-- ..||.+ + -+++||+.... .++.+. +-|+..|+..+| +..+.+++.
T Consensus 292 ~~VLDlgcG~G~~s----l~la~~-~----~~V~gvD~s~~------ai~~A~----~n~~~ngl~v~~--~~~d~~~~~ 350 (425)
T 2jjq_A 292 EKILDMYSGVGTFG----IYLAKR-G----FNVKGFDSNEF------AIEMAR----RNVEINNVDAEF--EVASDREVS 350 (425)
T ss_dssp SEEEEETCTTTHHH----HHHHHT-T----CEEEEEESCHH------HHHHHH----HHHHHHTCCEEE--EECCTTTCC
T ss_pred CEEEEeeccchHHH----HHHHHc-C----CEEEEEECCHH------HHHHHH----HHHHHcCCcEEE--EECChHHcC
Confidence 47899999888533 345554 2 28999986432 233333 334556777444 444444443
Q ss_pred CCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEEe
Q 007853 405 PSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVE 457 (587)
Q Consensus 405 ~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlvE 457 (587)
+. .=+++++|-. . ....+.+++.++.|+|.-++++.
T Consensus 351 ~~-----~fD~Vv~dPP-------r-----~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 351 VK-----GFDTVIVDPP-------R-----AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp CT-----TCSEEEECCC-------T-----TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred cc-----CCCEEEEcCC-------c-----cchHHHHHHHHHhcCCCcEEEEE
Confidence 22 2246666532 1 01124689999999999888775
No 135
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=37.35 E-value=26 Score=32.86 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=21.2
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
.-+|+|+|.|.|. +...|+.+ + .++|||+..
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s 72 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDIN 72 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSC
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECC
Confidence 3579999998875 34455554 2 268999864
No 136
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=37.33 E-value=32 Score=31.78 Aligned_cols=102 Identities=13% Similarity=0.079 Sum_probs=51.8
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC-ceEEEEeeCCCCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV-PFEFHAVPSKTSLV 403 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv-pFeF~~V~~~~e~l 403 (587)
-+|+|+|.|.|.--..+ +.+ + . -+||||+.... .++.+. +-++..|+ ..+|. ..+..+.
T Consensus 56 ~~vLDlgcG~G~~~~~l----~~~-~-~--~~V~~vD~s~~------~l~~a~----~~~~~~~~~~v~~~--~~D~~~~ 115 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEA----LSR-Y-A--AGATLIEMDRA------VSQQLI----KNLATLKAGNARVV--NSNAMSF 115 (202)
T ss_dssp CEEEETTCTTCHHHHHH----HHT-T-C--SEEEEECSCHH------HHHHHH----HHHHHTTCCSEEEE--CSCHHHH
T ss_pred CeEEEeCCCcCHHHHHH----Hhc-C-C--CEEEEEECCHH------HHHHHH----HHHHHcCCCcEEEE--ECCHHHH
Confidence 47999999888533322 223 1 1 28999986432 233333 33455665 34443 2322211
Q ss_pred CCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHh---cCCcEEEEEecc
Q 007853 404 TPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKS---LNPKLVTVVEQD 459 (587)
Q Consensus 404 ~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~---L~PkVVtlvEqE 459 (587)
.+. .-..=+.|++|..|. . .....+|+.++. |+|.-+++++..
T Consensus 116 ~~~--~~~~fD~V~~~~p~~---~--------~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 116 LAQ--KGTPHNIVFVDPPFR---R--------GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HSS--CCCCEEEEEECCSSS---T--------TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred Hhh--cCCCCCEEEECCCCC---C--------CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 000 000113555554432 1 123567777766 999877766644
No 137
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=37.29 E-value=1.1e+02 Score=28.42 Aligned_cols=33 Identities=18% Similarity=0.353 Sum_probs=21.3
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
-+|+|+|.|.|.-=.. |+.+- |..+||+|+...
T Consensus 56 ~~vLdiG~G~G~~~~~----la~~~---~~~~v~~vD~~~ 88 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIR----MAQAL---PEATIVSIERDE 88 (233)
T ss_dssp SEEEEECCTTSHHHHH----HHHHC---TTCEEEEECCCH
T ss_pred CEEEEecCCCcHHHHH----HHHHC---CCCEEEEEECCH
Confidence 4799999988854333 33321 246999998643
No 138
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=36.79 E-value=2.5e+02 Score=26.33 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=23.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+.-.|+|+|.|.|. +...|+.+ + .++|||+...
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s~ 86 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDPSK 86 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEESCH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeCCH
Confidence 45689999999885 44456655 2 3899998643
No 139
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=35.00 E-value=2.2e+02 Score=28.18 Aligned_cols=43 Identities=9% Similarity=0.045 Sum_probs=28.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcC-CCCCCeEEEEeecCCCc
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASL-PGNRPHLRLTGVDDPES 365 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~R-pggPP~LRITgI~~p~~ 365 (587)
+.+.|.|.|.+.|.---+|--.|+.. +..+...+|+|+|-...
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~ 148 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTE 148 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHH
Confidence 56999999999997544444445543 22222579999997543
No 140
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=34.70 E-value=2.5e+02 Score=27.07 Aligned_cols=44 Identities=23% Similarity=0.339 Sum_probs=28.7
Q ss_pred HHHhhhc---cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 314 AIIEAFK---GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 314 AILEA~~---g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
+|+++++ =...=+|+|+|.+.|. |...|-.+... .=+|+||+..
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~~-----~G~V~avD~s 110 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIEL-----NGKAYGVEFS 110 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHTT-----TSEEEEEECC
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhCC-----CCEEEEEECc
Confidence 4555543 2344579999999987 66666555422 2389999964
No 141
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=33.67 E-value=64 Score=32.06 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=34.7
Q ss_pred CCcchhhh-HHhhH----HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 301 CPCFKFGF-MAANG----AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 301 sP~~kfa~-~tANq----AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.|=-++|. |..|. .|++++.-... +|+|+|-|.|. |-..|+.+. -++|||+...
T Consensus 20 ~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~-----~~V~avEid~ 78 (271)
T 3fut_A 20 FADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG-----AEVTAIEKDL 78 (271)
T ss_dssp CCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT-----CCEEEEESCG
T ss_pred CccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC-----CEEEEEECCH
Confidence 44444554 44444 45555555566 99999999885 566677662 2799998643
No 142
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=30.92 E-value=2.1e+02 Score=26.46 Aligned_cols=34 Identities=6% Similarity=0.080 Sum_probs=23.0
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+.-+|+|+|.|.|. +...|+.+. +. ++|||+...
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~~-~v~gvD~s~ 93 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---ID-EHWIIECND 93 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---EE-EEEEEECCH
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---CC-eEEEEcCCH
Confidence 45689999999984 334445432 22 899998753
No 143
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=28.74 E-value=1.5e+02 Score=27.44 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=23.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+.-.|+|+|.|.|.- ...||.+. |..+++||+...
T Consensus 38 ~~~~vLDiGcG~G~~----~~~la~~~---p~~~v~giD~s~ 72 (213)
T 2fca_A 38 DNPIHIEVGTGKGQF----ISGMAKQN---PDINYIGIELFK 72 (213)
T ss_dssp CCCEEEEECCTTSHH----HHHHHHHC---TTSEEEEECSCH
T ss_pred CCceEEEEecCCCHH----HHHHHHHC---CCCCEEEEEech
Confidence 345699999998853 33444442 456999999653
No 144
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=28.40 E-value=1.4e+02 Score=31.05 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=41.3
Q ss_pred CeeEE-Eeccc--------------CCcc---chHHHHHHHhcCCCCCCeEEEEeecCC-CchhhcchHHHHHHHHHHHH
Q 007853 323 KRVHI-IDFDI--------------NQGS---QYITLIQTIASLPGNRPHLRLTGVDDP-ESVQRLVGGLQIIGLRLESL 383 (587)
Q Consensus 323 ~~VHI-IDfdI--------------~~G~---QWpsLIqaLA~RpggPP~LRITgI~~p-~~~~~~~~~L~etG~rL~~f 383 (587)
-+||| ||-|+ -+|+ ++..+++.++.. |.|+|.||... .+.........+.-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 46888 88775 3565 677888877664 57999999864 22111122333344455555
Q ss_pred HH----HcCCceEEEE
Q 007853 384 AE----ALGVPFEFHA 395 (587)
Q Consensus 384 A~----~lgvpFeF~~ 395 (587)
++ .+|+++++--
T Consensus 209 ~~~l~~~~g~~~~~l~ 224 (428)
T 2j66_A 209 GRNIYERYGIVCECIN 224 (428)
T ss_dssp HHHHHHHHCCCCSEEE
T ss_pred HHHHHHHhCCCCCEEE
Confidence 44 4487766543
No 145
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=26.38 E-value=1.3e+02 Score=28.85 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=22.0
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.-+|+|+|.|.|. +...++.+ |+ +++||+...
T Consensus 121 ~~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~ 152 (254)
T 2nxc_A 121 GDKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDP 152 (254)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCG
T ss_pred CCEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCH
Confidence 3579999998885 33345554 33 999999643
No 146
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=26.20 E-value=1.6e+02 Score=26.97 Aligned_cols=41 Identities=12% Similarity=0.181 Sum_probs=25.9
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
.|++.+.-.+.-+|+|+|.|.|.--.. |+.+. -++|||+..
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~----l~~~~-----~~v~~vD~~ 101 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTAL----IAEIV-----DKVVSVEIN 101 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHH----HHHHS-----SEEEEEESC
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHH----HHHHc-----CEEEEEeCC
Confidence 444555444556899999998864333 33331 389999864
No 147
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=26.19 E-value=2.8e+02 Score=26.17 Aligned_cols=116 Identities=9% Similarity=0.098 Sum_probs=55.4
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSL 402 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~ 402 (587)
+.-.|+|+|.|.|. +...||.+. +. +||||+.... .++.+ .+-++..|+.=....+..+..+
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~---~~-~v~gvDi~~~------~~~~a----~~n~~~~~~~~~v~~~~~D~~~ 110 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT---KA-KIVGVEIQER------LADMA----KRSVAYNQLEDQIEIIEYDLKK 110 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC---CC-EEEEECCSHH------HHHHH----HHHHHHTTCTTTEEEECSCGGG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc---CC-cEEEEECCHH------HHHHH----HHHHHHCCCcccEEEEECcHHH
Confidence 35589999999984 445667763 22 9999986432 12222 3334556665223334343333
Q ss_pred CCCCccccCCCceEEEEeccccc---cCCCC--cccc-----cchHHHHHHHH-HhcCCcEEEEEe
Q 007853 403 VTPSMLECRPGEALVVNFAFQLH---HMPDE--SVST-----VNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 403 l~~~~L~~~~gEaLaVN~~f~Lh---~L~de--svs~-----~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
+... +.-..=++|+.|-.|.-. ++... .... ....+.+|+.+ +-|+|.-.+++.
T Consensus 111 ~~~~-~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 111 ITDL-IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GGGT-SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhh-hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 2210 111112477777655322 22111 0000 01234566655 568998666553
No 148
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=26.14 E-value=1.8e+02 Score=25.20 Aligned_cols=41 Identities=17% Similarity=0.173 Sum_probs=25.9
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+++.+.-.+.-+|+|+|.|.|. +...|+.+. .++|+|+...
T Consensus 25 ~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~ 65 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNP 65 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCH
T ss_pred HHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCH
Confidence 3344444445689999998874 334455442 5899998643
No 149
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=26.13 E-value=1.5e+02 Score=27.68 Aligned_cols=45 Identities=16% Similarity=0.179 Sum_probs=29.0
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.|++.+.-.+.-+|+|+|.|.|.--..|.+.+ .|..++++|+...
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~ 128 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIRE 128 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCH
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecCH
Confidence 45555554555689999999985444444443 1446899998643
No 150
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=26.05 E-value=1.3e+02 Score=27.75 Aligned_cols=32 Identities=9% Similarity=0.153 Sum_probs=23.6
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.-+|+|+|.|.|. +...|+.+ + .++|||+...
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s~ 80 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDFSP 80 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG-S----SEEEEEESCH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C----CEEEEEECCH
Confidence 3579999999986 55666666 2 3899998643
No 151
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=25.92 E-value=2.8e+02 Score=26.82 Aligned_cols=30 Identities=7% Similarity=0.024 Sum_probs=20.2
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDD 362 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~ 362 (587)
-.|+|+|.|.|.- + ..|+.+ |. -++|||+.
T Consensus 81 ~~vLDlG~G~G~~--~--~~~a~~--~~--~~v~~~D~ 110 (281)
T 3bzb_A 81 KTVCELGAGAGLV--S--IVAFLA--GA--DQVVATDY 110 (281)
T ss_dssp CEEEETTCTTSHH--H--HHHHHT--TC--SEEEEEEC
T ss_pred CeEEEecccccHH--H--HHHHHc--CC--CEEEEEeC
Confidence 4799999988842 2 245554 21 38999997
No 152
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=25.48 E-value=2.1e+02 Score=26.53 Aligned_cols=36 Identities=14% Similarity=-0.033 Sum_probs=23.2
Q ss_pred cCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 321 GEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 321 g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
..+.-.|+|+|.|.|.-- ..|+.+ ++ .+||||+...
T Consensus 54 ~~~~~~vLDlGcG~G~~~----~~l~~~--~~--~~v~gvD~s~ 89 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQ----LLSACE--SF--TEIIVSDYTD 89 (265)
T ss_dssp SCCEEEEEEESCTTCCGG----GTTGGG--TE--EEEEEEESCH
T ss_pred ccCCCEEEEECCCccHHH----HHHhhc--cc--CeEEEecCCH
Confidence 345678999999987432 223332 22 6899999754
No 153
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=25.18 E-value=2.2e+02 Score=30.28 Aligned_cols=117 Identities=9% Similarity=0.051 Sum_probs=61.4
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHH---HHHHHHHHHHcCCc
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQII---GLRLESLAEALGVP 390 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~et---G~rL~~fA~~lgvp 390 (587)
.|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+..... ++.+ -+.+.+-++.+|+.
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis~~~------l~~A~~Ml~~ar~~~~~~Gl~ 299 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIMDDA------SDLTILQYEELKKRCKLYGMR 299 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECCHHH------HHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCCHHH------HHHHHHhHHHHHHHHHHcCCC
Confidence 45566554555679999999987655554433 23489999975432 2222 23334445667743
Q ss_pred ---eEEEEeeC-CCCCCCCCcc--ccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEEe
Q 007853 391 ---FEFHAVPS-KTSLVTPSML--ECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVE 457 (587)
Q Consensus 391 ---FeF~~V~~-~~e~l~~~~L--~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlvE 457 (587)
++|. .. .... ...+ ...+=++|++|..+ + .+ +....+-.+.+.|+|.-.+++-
T Consensus 300 ~~nV~~i--~gD~~~~--~~~~~~~~~~FDvIvvn~~l--~-~~-------d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 300 LNNVEFS--LKKSFVD--NNRVAELIPQCDVILVNNFL--F-DE-------DLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp CCCEEEE--ESSCSTT--CHHHHHHGGGCSEEEECCTT--C-CH-------HHHHHHHHHHTTCCTTCEEEES
T ss_pred CCceEEE--EcCcccc--ccccccccCCCCEEEEeCcc--c-cc-------cHHHHHHHHHHhCCCCeEEEEe
Confidence 4443 22 1111 0011 01223577776433 1 11 2233455566889998665553
No 154
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=25.00 E-value=86 Score=31.53 Aligned_cols=118 Identities=16% Similarity=0.182 Sum_probs=61.6
Q ss_pred hhHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc
Q 007853 311 ANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390 (587)
Q Consensus 311 ANqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp 390 (587)
..+.|++.+.....-+|+|+|.|.|.--. .|+.+. |..++|+|+.... .++.+.++ ++..|+.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~----~la~~~---~~~~v~~vD~s~~------~l~~a~~~----~~~~~~~ 246 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSV----AFARHS---PKIRLTLCDVSAP------AVEASRAT----LAANGVE 246 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHH----HHHHHC---TTCBCEEEESBHH------HHHHHHHH----HHHTTCC
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHH----HHHHHC---CCCEEEEEECCHH------HHHHHHHH----HHHhCCC
Confidence 35778888744334479999999886333 333331 4568999996432 23333333 3446776
Q ss_pred eEEEEeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCcEEEEEe
Q 007853 391 FEFHAVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPKLVTVVE 457 (587)
Q Consensus 391 FeF~~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~PkVVtlvE 457 (587)
.+| +..+..+... ..=+.|+.|.. +|+-... .......+|+.+ +-|+|.-.+++.
T Consensus 247 ~~~--~~~d~~~~~~-----~~fD~Iv~~~~--~~~g~~~---~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 247 GEV--FASNVFSEVK-----GRFDMIISNPP--FHDGMQT---SLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp CEE--EECSTTTTCC-----SCEEEEEECCC--CCSSSHH---HHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CEE--EEcccccccc-----CCeeEEEECCC--cccCccC---CHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 665 3333222111 11135555544 4442110 012245666665 668998665443
No 155
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=24.42 E-value=68 Score=27.22 Aligned_cols=43 Identities=16% Similarity=0.101 Sum_probs=32.1
Q ss_pred CCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEE
Q 007853 350 GNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394 (587)
Q Consensus 350 ggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 394 (587)
-|||.-|||....... .....|+++-+.+.+..+..|..|+|+
T Consensus 49 vgaP~Y~i~~~~~D~k--~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 49 IGAPRYRVDVVGTNPK--EASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp SSTTEEEEEEEESCHH--HHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred EcCCeEEEEEEecCHH--HHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 3788888877764321 123468899999999999999999885
No 156
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=24.33 E-value=1.2e+02 Score=26.01 Aligned_cols=32 Identities=19% Similarity=0.022 Sum_probs=21.5
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.-+|+|+|.|.|. +...|+.+ + +. +|||+...
T Consensus 42 ~~~vLD~GcG~G~----~~~~l~~~--~-~~--v~~vD~~~ 73 (171)
T 1ws6_A 42 RGRFLDPFAGSGA----VGLEAASE--G-WE--AVLVEKDP 73 (171)
T ss_dssp CCEEEEETCSSCH----HHHHHHHT--T-CE--EEEECCCH
T ss_pred CCeEEEeCCCcCH----HHHHHHHC--C-Ce--EEEEeCCH
Confidence 3479999999984 34445554 2 33 99999643
No 157
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=23.38 E-value=2.9e+02 Score=27.39 Aligned_cols=64 Identities=19% Similarity=0.085 Sum_probs=37.9
Q ss_pred hhHHHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc
Q 007853 311 ANGAIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390 (587)
Q Consensus 311 ANqAILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp 390 (587)
+-+.+.+++.-...-+|+|+|-+.|.--..|.+.+ ++.-+||||+.... .++. +.+-++.+|++
T Consensus 106 ~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~------~~~~~v~avD~s~~------~l~~----a~~~~~~~g~~ 169 (315)
T 1ixk_A 106 SSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLM------RNDGVIYAFDVDEN------RLRE----TRLNLSRLGVL 169 (315)
T ss_dssp HHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHT------TTCSEEEEECSCHH------HHHH----HHHHHHHHTCC
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHh------CCCCEEEEEcCCHH------HHHH----HHHHHHHhCCC
Confidence 34444555554555689999999986544444433 13358999986432 2333 33445566774
No 158
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=23.35 E-value=1.5e+02 Score=29.80 Aligned_cols=115 Identities=16% Similarity=0.106 Sum_probs=54.9
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEE
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFH 394 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~ 394 (587)
|+....-...-.|+|.+.|.|. +.-.+|.+- .|..+|+|++.... .++.+ .+-++..|++ ..+
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~--~~~~~v~g~Di~~~------~i~~a----~~n~~~~g~~-~i~ 257 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL--GPTSPVYAGDLDEK------RLGLA----REAALASGLS-WIR 257 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH--CTTSCEEEEESCHH------HHHHH----HHHHHHTTCT-TCE
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh--CCCceEEEEECCHH------HHHHH----HHHHHHcCCC-ceE
Confidence 3333333344579999999985 222223221 14568999986432 23333 3345567775 233
Q ss_pred EeeCCCCCCCCCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHH-HhcCCc
Q 007853 395 AVPSKTSLVTPSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMV-KSLNPK 451 (587)
Q Consensus 395 ~V~~~~e~l~~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V-r~L~Pk 451 (587)
.+..+..++... ...-++++.|-.|......... ...--..+++.+ +-|+|.
T Consensus 258 ~~~~D~~~~~~~---~~~~D~Ii~npPyg~r~~~~~~--~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 258 FLRADARHLPRF---FPEVDRILANPPHGLRLGRKEG--LFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp EEECCGGGGGGT---CCCCSEEEECCCSCC----CHH--HHHHHHHHHHHHHHTSCTT
T ss_pred EEeCChhhCccc---cCCCCEEEECCCCcCccCCccc--HHHHHHHHHHHHHHhcCCC
Confidence 333333332211 1112588888776443211110 011124566655 456784
No 159
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=22.99 E-value=1.8e+02 Score=25.33 Aligned_cols=104 Identities=11% Similarity=0.130 Sum_probs=53.9
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCceEEEEeeCCCCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVPFEFHAVPSKTSLV 403 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvpFeF~~V~~~~e~l 403 (587)
.-.|+|+|.|.|.- ...|+.++ .-++|||+.... .++ ...+.++..|++=..+.+..+..+.
T Consensus 32 ~~~vLDlGcG~G~~----~~~l~~~~----~~~v~~vD~~~~------~~~----~a~~~~~~~~~~~~~~~~~~d~~~~ 93 (177)
T 2esr_A 32 GGRVLDLFAGSGGL----AIEAVSRG----MSAAVLVEKNRK------AQA----IIQDNIIMTKAENRFTLLKMEAERA 93 (177)
T ss_dssp SCEEEEETCTTCHH----HHHHHHTT----CCEEEEECCCHH------HHH----HHHHHHHTTTCGGGEEEECSCHHHH
T ss_pred CCeEEEeCCCCCHH----HHHHHHcC----CCEEEEEECCHH------HHH----HHHHHHHHcCCCCceEEEECcHHHh
Confidence 34799999998853 33455552 358999996432 233 2333445566652223333332221
Q ss_pred CCCccccCCC--ceEEEEeccccccCCCCcccccchHHHHHHHH---HhcCCcEEEEEeccC
Q 007853 404 TPSMLECRPG--EALVVNFAFQLHHMPDESVSTVNQRDQLLRMV---KSLNPKLVTVVEQDM 460 (587)
Q Consensus 404 ~~~~L~~~~g--EaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~V---r~L~PkVVtlvEqEa 460 (587)
+...++ ++++.|..|.. .....+++.+ +-|+|.-+++++...
T Consensus 94 ----~~~~~~~fD~i~~~~~~~~-----------~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 94 ----IDCLTGRFDLVFLDPPYAK-----------ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp ----HHHBCSCEEEEEECCSSHH-----------HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ----HHhhcCCCCEEEECCCCCc-----------chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 111111 35555544311 1234566666 678999777776543
No 160
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=22.95 E-value=2.8e+02 Score=25.62 Aligned_cols=42 Identities=7% Similarity=0.144 Sum_probs=26.7
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
.+++.+.-.+.-.|+|+|.|.|..-..|.+.. + .++|+|+..
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-------~-~~v~~vD~~ 123 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALISEIV-------K-TDVYTIERI 123 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH-------C-SCEEEEESC
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh-------C-CEEEEEeCC
Confidence 44555544445579999998886544444433 1 489999864
No 161
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=22.78 E-value=1.8e+02 Score=27.82 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=26.8
Q ss_pred HHHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 314 AIIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 314 AILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
.|++.+.-...-.|+|+|.|.|.-- ..|+.+- .|..++|+|+..
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~----~~la~~~--~~~~~v~~vD~s 146 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMC----AVLARAV--GSSGKVFAYEKR 146 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHH----HHHHHHT--TTTCEEEEECCC
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHH----HHHHHHh--CCCcEEEEEECC
Confidence 4455554444558999999988533 3333331 134599999864
No 162
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=22.33 E-value=3.1e+02 Score=25.23 Aligned_cols=34 Identities=12% Similarity=0.266 Sum_probs=21.8
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDP 363 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p 363 (587)
.-+|+|+|.|.|.-= ..|+.+-| |.-+++||+..
T Consensus 78 ~~~vLDlG~G~G~~~----~~la~~~g--~~~~v~gvD~s 111 (233)
T 2ipx_A 78 GAKVLYLGAASGTTV----SHVSDIVG--PDGLVYAVEFS 111 (233)
T ss_dssp TCEEEEECCTTSHHH----HHHHHHHC--TTCEEEEECCC
T ss_pred CCEEEEEcccCCHHH----HHHHHHhC--CCcEEEEEECC
Confidence 447999999998633 33343311 33489999864
No 163
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=22.14 E-value=1.2e+02 Score=27.80 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=52.9
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCC---ceEEEEeeCCCC
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGV---PFEFHAVPSKTS 401 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgv---pFeF~~V~~~~e 401 (587)
-.|+|+|.|.|.-- +. ++.+. . -++|||+.... .++.+.+ -++..|+ ..+|. ..+..
T Consensus 55 ~~vLDlGcGtG~~~---~~-~~~~~--~--~~v~gvD~s~~------~l~~a~~----~~~~~~~~~~~v~~~--~~d~~ 114 (201)
T 2ift_A 55 SECLDGFAGSGSLG---FE-ALSRQ--A--KKVTFLELDKT------VANQLKK----NLQTLKCSSEQAEVI--NQSSL 114 (201)
T ss_dssp CEEEETTCTTCHHH---HH-HHHTT--C--SEEEEECSCHH------HHHHHHH----HHHHTTCCTTTEEEE--CSCHH
T ss_pred CeEEEcCCccCHHH---HH-HHHcc--C--CEEEEEECCHH------HHHHHHH----HHHHhCCCccceEEE--ECCHH
Confidence 47999999888432 22 23331 1 38999986432 2333333 3445666 34443 22222
Q ss_pred CCCCCccccCC-CceEEEEeccccccCCCCcccccchHHHHHHHHHh---cCCcEEEEEeccCC
Q 007853 402 LVTPSMLECRP-GEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKS---LNPKLVTVVEQDMN 461 (587)
Q Consensus 402 ~l~~~~L~~~~-gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~---L~PkVVtlvEqEan 461 (587)
++.+. +.-.. =++|+.|..| | . .....+|+.+.. |+|.-+++++....
T Consensus 115 ~~~~~-~~~~~~fD~I~~~~~~--~-~--------~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 115 DFLKQ-PQNQPHFDVVFLDPPF--H-F--------NLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp HHTTS-CCSSCCEEEEEECCCS--S-S--------CHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred HHHHh-hccCCCCCEEEECCCC--C-C--------ccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 11110 00011 1355555442 2 1 234578888765 99987777665433
No 164
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=22.12 E-value=1.2e+02 Score=30.65 Aligned_cols=107 Identities=14% Similarity=0.080 Sum_probs=68.7
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcC--CceEEEEeeCCCCCC
Q 007853 326 HIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALG--VPFEFHAVPSKTSLV 403 (587)
Q Consensus 326 HIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lg--vpFeF~~V~~~~e~l 403 (587)
.||++|-|.-.. -+.| ..|+.+++--|+.|.. -+.+++|.. ..| -+=.++.|..+..+
T Consensus 105 QvV~LGaGlDTr----a~Rl----~~~~~~~v~evD~P~v--------i~~k~~lL~---~~~~~~~~~~~~v~~Dl~d- 164 (310)
T 2uyo_A 105 QFVILASGLDSR----AYRL----DWPTGTTVYEIDQPKV--------LAYKSTTLA---EHGVTPTADRREVPIDLRQ- 164 (310)
T ss_dssp EEEEETCTTCCH----HHHS----CCCTTCEEEEEECHHH--------HHHHHHHHH---HTTCCCSSEEEEEECCTTS-
T ss_pred eEEEeCCCCCch----hhhc----cCCCCcEEEEcCCHHH--------HHHHHHHHH---hcCCCCCCCeEEEecchHh-
Confidence 599999987544 3333 2345689999987642 233444432 122 23456777766654
Q ss_pred CC-Ccc---ccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhc-CCcEEEEEec
Q 007853 404 TP-SML---ECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSL-NPKLVTVVEQ 458 (587)
Q Consensus 404 ~~-~~L---~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L-~PkVVtlvEq 458 (587)
+. +.| +++++..+++-+.--||+|+++. .+.+|+.+..+ .|.-.++.|+
T Consensus 165 ~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~------~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 165 DWPPALRSAGFDPSARTAWLAEGLLMYLPATA------QDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHH------HHHHHHHHHHTCCTTCEEEEEC
T ss_pred hHHHHHHhccCCCCCCEEEEEechHhhCCHHH------HHHHHHHHHHhCCCCeEEEEEe
Confidence 21 112 35677889999999999998743 36799999876 5887788886
No 165
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=21.87 E-value=1.9e+02 Score=26.39 Aligned_cols=55 Identities=16% Similarity=0.153 Sum_probs=32.2
Q ss_pred eEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc--eEEEE
Q 007853 325 VHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP--FEFHA 395 (587)
Q Consensus 325 VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp--FeF~~ 395 (587)
-+|+|+|.|.|.--. .|+.+- |+..+||+|+.... .++. ..+.++..|+. .+|..
T Consensus 66 ~~vLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~~~~------~~~~----a~~~~~~~~~~~~v~~~~ 122 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAI----AMGLAL--PKDGTLITCDVDEK------STAL----AKEYWEKAGLSDKIGLRL 122 (225)
T ss_dssp SEEEEECCTTSHHHH----HHHTTC--CTTCEEEEEESCHH------HHHH----HHHHHHHTTCTTTEEEEE
T ss_pred CEEEEeCCcchHHHH----HHHHhC--CCCCEEEEEeCCHH------HHHH----HHHHHHHCCCCCceEEEe
Confidence 389999999885333 344432 23579999996432 2333 33345556765 55543
No 166
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=21.78 E-value=4e+02 Score=24.82 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=23.7
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+.-.|+|+|.|.|.- ...||.+. |..++|||+...
T Consensus 49 ~~~~vLDiGcG~G~~----~~~la~~~---~~~~v~gvD~s~ 83 (246)
T 2vdv_E 49 KKVTIADIGCGFGGL----MIDLSPAF---PEDLILGMEIRV 83 (246)
T ss_dssp CCEEEEEETCTTSHH----HHHHHHHS---TTSEEEEEESCH
T ss_pred CCCEEEEEcCCCCHH----HHHHHHhC---CCCCEEEEEcCH
Confidence 456899999999863 33344432 456999999653
No 167
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=20.88 E-value=1.3e+02 Score=28.31 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=32.6
Q ss_pred ccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc
Q 007853 320 KGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP 390 (587)
Q Consensus 320 ~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp 390 (587)
...+.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+.... .++ ...+.++..|+.
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~------~~~----~a~~~~~~~g~~ 107 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESE------HQR----QAKALFREAGYS 107 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHH------HHH----HHHHHHHHTTCC
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHH------HHH----HHHHHHHHcCCC
Confidence 33445589999888875444444443 23459999996432 122 334455667775
No 168
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=20.85 E-value=1.7e+02 Score=26.76 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=22.3
Q ss_pred eeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 324 RVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 324 ~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
.-+|+|+|.+.|. +...|+..- |+.-+||+|+...
T Consensus 70 ~~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~~ 104 (229)
T 2avd_A 70 AKKALDLGTFTGY----SALALALAL--PADGRVVTCEVDA 104 (229)
T ss_dssp CCEEEEECCTTSH----HHHHHHTTS--CTTCEEEEEESCS
T ss_pred CCEEEEEcCCccH----HHHHHHHhC--CCCCEEEEEECCH
Confidence 3479999998774 233344432 2346999999654
No 169
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=20.84 E-value=1.2e+02 Score=28.63 Aligned_cols=45 Identities=18% Similarity=0.232 Sum_probs=28.3
Q ss_pred HHhhhccCCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 315 IIEAFKGEKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 315 ILEA~~g~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+++.+.+.+...|+|+|.|.|. +.-.|+.+- ..|..+||||+...
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis~ 87 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVDP 87 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESCH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECCH
Confidence 3444444567899999999994 333333331 11457999999654
No 170
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=20.59 E-value=3.8e+02 Score=25.79 Aligned_cols=95 Identities=9% Similarity=0.057 Sum_probs=49.6
Q ss_pred EEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCCchhhcchHHHHHHHHHHHHHHHcCCc-eEEEEeeCCCCCCC
Q 007853 326 HIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPESVQRLVGGLQIIGLRLESLAEALGVP-FEFHAVPSKTSLVT 404 (587)
Q Consensus 326 HIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~~~~~~~~~L~etG~rL~~fA~~lgvp-FeF~~V~~~~e~l~ 404 (587)
.|+|+|.|.|.--..|. .+- +..++|||+.... .++ .+.+-|+..|++ .+ .+..+..++
T Consensus 122 ~VLDlgcG~G~~s~~la----~~~---~~~~V~~vD~s~~------av~----~a~~n~~~n~l~~~~--~~~~d~~~~- 181 (272)
T 3a27_A 122 VVVDMFAGIGYFTIPLA----KYS---KPKLVYAIEKNPT------AYH----YLCENIKLNKLNNVI--PILADNRDV- 181 (272)
T ss_dssp EEEETTCTTTTTHHHHH----HHT---CCSEEEEEECCHH------HHH----HHHHHHHHTTCSSEE--EEESCGGGC-
T ss_pred EEEEecCcCCHHHHHHH----HhC---CCCEEEEEeCCHH------HHH----HHHHHHHHcCCCCEE--EEECChHHc-
Confidence 68999999987544433 321 1358999986432 222 333445566763 44 334444333
Q ss_pred CCccccCCCceEEEEeccccccCCCCcccccchHHHHHHHHHhcCCcEEEEE
Q 007853 405 PSMLECRPGEALVVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVV 456 (587)
Q Consensus 405 ~~~L~~~~gEaLaVN~~f~Lh~L~desvs~~n~Rd~~L~~Vr~L~PkVVtlv 456 (587)
+. -..=+++++|... +..+.+...++.|+|.-++++
T Consensus 182 ~~---~~~~D~Vi~d~p~-------------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 182 EL---KDVADRVIMGYVH-------------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp CC---TTCEEEEEECCCS-------------SGGGGHHHHHHHEEEEEEEEE
T ss_pred Cc---cCCceEEEECCcc-------------cHHHHHHHHHHHcCCCCEEEE
Confidence 21 0111456665322 112234445778899755544
No 171
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=20.10 E-value=4.1e+02 Score=26.86 Aligned_cols=35 Identities=9% Similarity=0.114 Sum_probs=21.5
Q ss_pred CeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 323 KRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 323 ~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
..=+|+|+|.|.|. +..++ ||..+| -+||||+...
T Consensus 122 ~g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDis~ 156 (298)
T 3fpf_A 122 RGERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEIEP 156 (298)
T ss_dssp TTCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEESSH
T ss_pred CcCEEEEECCCccH-HHHHH--HHHccC----CEEEEEECCH
Confidence 33478888887653 33333 354444 4899998643
No 172
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=20.09 E-value=85 Score=28.05 Aligned_cols=43 Identities=26% Similarity=0.304 Sum_probs=27.6
Q ss_pred HHhhhcc-CCeeEEEecccCCccchHHHHHHHhcCCCCCCeEEEEeecCCC
Q 007853 315 IIEAFKG-EKRVHIIDFDINQGSQYITLIQTIASLPGNRPHLRLTGVDDPE 364 (587)
Q Consensus 315 ILEA~~g-~~~VHIIDfdI~~G~QWpsLIqaLA~RpggPP~LRITgI~~p~ 364 (587)
+++.+.. .+.-+|+|+|.|.|.--.. |+.+. |..++|||+...
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~~~----l~~~~---~~~~v~~vD~~~ 64 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIAVS----IALAC---PGVSVTAVDLSM 64 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHHHH----HHHHC---TTEEEEEEECC-
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHHHH----HHHhC---CCCeEEEEECCH
Confidence 3444443 5667999999999963333 33331 457999999754
Done!