Query 007854
Match_columns 587
No_of_seqs 204 out of 824
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 16:14:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007854.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007854hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 4E-196 9E-201 1625.1 52.2 584 3-587 188-785 (785)
2 PLN00151 potassium transporter 100.0 1E-195 3E-200 1620.2 52.8 581 3-587 265-852 (852)
3 PLN00150 potassium ion transpo 100.0 2E-194 4E-199 1610.7 52.3 574 3-587 205-779 (779)
4 PLN00149 potassium transporter 100.0 4E-194 9E-199 1610.7 53.7 577 5-587 190-779 (779)
5 TIGR00794 kup potassium uptake 100.0 2E-175 4E-180 1452.2 50.5 529 3-587 159-688 (688)
6 PRK10745 trkD potassium transp 100.0 9E-159 2E-163 1301.6 44.5 484 4-587 136-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 8E-150 2E-154 1222.0 36.3 411 3-417 124-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 2E-145 5E-150 1169.7 42.4 485 7-587 143-627 (627)
9 TIGR00911 2A0308 L-type amino 92.5 0.53 1.1E-05 52.4 9.2 87 12-102 165-255 (501)
10 COG0531 PotE Amino acid transp 88.8 13 0.00029 40.0 15.6 179 11-193 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 84.3 22 0.00047 38.5 14.2 168 14-194 135-317 (429)
12 TIGR00930 2a30 K-Cl cotranspor 81.9 93 0.002 38.3 19.5 32 12-44 203-234 (953)
13 TIGR03813 put_Glu_GABA_T putat 81.6 39 0.00085 37.4 15.1 37 83-119 195-233 (474)
14 PRK10435 cadB lysine/cadaverin 78.3 48 0.001 36.3 14.4 23 15-37 124-146 (435)
15 TIGR00907 2A0304 amino acid pe 78.3 18 0.0004 39.9 11.2 21 293-313 454-474 (482)
16 TIGR00906 2A0303 cationic amin 73.2 91 0.002 35.7 15.3 44 13-56 162-208 (557)
17 PRK15049 L-asparagine permease 72.9 62 0.0013 36.4 13.7 23 14-36 146-168 (499)
18 PRK10655 potE putrescine trans 72.0 77 0.0017 34.5 13.9 43 14-56 125-170 (438)
19 PF13520 AA_permease_2: Amino 71.2 17 0.00038 39.0 8.6 223 12-250 118-367 (426)
20 TIGR03810 arg_ornith_anti argi 64.6 2.2E+02 0.0047 31.6 15.6 44 151-194 274-317 (468)
21 PF14362 DUF4407: Domain of un 64.4 66 0.0014 33.7 11.0 51 234-284 15-69 (301)
22 TIGR00908 2A0305 ethanolamine 61.9 1.1E+02 0.0024 33.3 12.6 24 14-37 123-146 (442)
23 PRK10746 putative transport pr 60.0 2.4E+02 0.0053 31.3 15.0 26 293-318 427-452 (461)
24 PRK10238 aromatic amino acid t 58.3 1.5E+02 0.0032 32.8 12.9 113 15-131 129-250 (456)
25 TIGR00905 2A0302 transporter, 56.2 1.4E+02 0.0031 33.0 12.4 43 152-194 279-321 (473)
26 TIGR00910 2A0307_GadC glutamat 56.2 2E+02 0.0043 32.5 13.6 52 84-135 196-249 (507)
27 PRK11021 putative transporter; 55.0 3E+02 0.0066 29.7 15.5 27 12-38 115-141 (410)
28 PRK10249 phenylalanine transpo 54.3 2.5E+02 0.0053 31.1 13.8 102 15-118 138-247 (458)
29 PRK11357 frlA putative fructos 50.3 2.5E+02 0.0053 30.8 12.9 44 14-57 129-175 (445)
30 KOG3145 Cystine transporter Cy 49.8 18 0.0004 38.7 3.8 89 16-115 213-341 (372)
31 COG4059 MtrE Tetrahydromethano 49.5 16 0.00035 37.5 3.3 40 280-319 243-288 (304)
32 PRK10644 arginine:agmatin anti 49.4 1.3E+02 0.0028 33.0 10.6 23 14-36 127-149 (445)
33 PRK11387 S-methylmethionine tr 47.2 3.6E+02 0.0078 29.9 13.7 32 87-118 211-244 (471)
34 PRK10580 proY putative proline 46.8 2.9E+02 0.0064 30.4 12.9 24 291-314 423-446 (457)
35 PF06570 DUF1129: Protein of u 43.7 1E+02 0.0022 30.7 7.9 21 292-312 179-199 (206)
36 KOG3643 GABA receptor [Signal 38.2 20 0.00043 40.1 2.1 90 187-280 225-324 (459)
37 TIGR00913 2A0310 amino acid pe 38.2 4.4E+02 0.0096 29.0 12.7 29 90-118 205-235 (478)
38 KOG4742 Predicted chitinase [G 36.1 16 0.00035 38.7 0.9 30 106-144 173-207 (286)
39 PF00324 AA_permease: Amino ac 31.7 56 0.0012 36.1 4.4 36 84-119 202-239 (478)
40 PF05545 FixQ: Cbb3-type cytoc 31.3 49 0.0011 25.6 2.7 30 301-330 19-48 (49)
41 PRK11049 D-alanine/D-serine/gl 29.4 8.1E+02 0.018 27.1 14.6 107 87-194 216-333 (469)
42 TIGR01773 GABAperm gamma-amino 26.6 8.7E+02 0.019 26.5 15.9 101 14-117 128-238 (452)
43 cd05900 Ig_Aggrecan Immunoglob 25.2 86 0.0019 28.4 3.6 28 393-420 75-102 (112)
44 PRK05151 electron transport co 24.8 1.9E+02 0.0041 29.2 6.2 47 213-259 15-63 (193)
45 COG2179 Predicted hydrolase of 23.7 17 0.00037 35.9 -1.3 60 522-583 55-118 (175)
46 PF05313 Pox_P21: Poxvirus P21 23.7 1.2E+02 0.0027 30.3 4.6 62 115-186 88-149 (189)
47 TIGR01940 nqrE NADH:ubiquinone 22.1 2.6E+02 0.0057 28.4 6.7 47 213-259 14-62 (200)
48 PF02508 Rnf-Nqr: Rnf-Nqr subu 21.8 3.1E+02 0.0067 27.4 7.1 87 213-300 15-110 (190)
49 TIGR03428 ureacarb_perm permea 21.5 1.1E+03 0.024 26.0 18.4 25 12-36 144-168 (475)
50 PRK13108 prolipoprotein diacyl 20.8 3.6E+02 0.0078 30.7 8.1 19 235-253 24-42 (460)
51 PF02660 G3P_acyltransf: Glyce 20.4 8.2E+02 0.018 24.0 10.1 83 225-317 91-175 (178)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=4.2e-196 Score=1625.11 Aligned_cols=584 Identities=45% Similarity=0.854 Sum_probs=521.0
Q ss_pred cccCCCCCeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCc
Q 007854 3 SQMDLFAGALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 82 (587)
Q Consensus 3 ~~~~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~ 82 (587)
..|++++++|++|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||||+||+|+++||++||+
T Consensus 188 ~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~ 267 (785)
T PLN00148 188 TETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGLYNIIHWNPKIIHALSPYYIIKFFRVTGK 267 (785)
T ss_pred cCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCHHHhhhcCHHHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHH
Q 007854 83 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 162 (587)
Q Consensus 83 ~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vl 162 (587)
+||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+++|+|++||++++
T Consensus 268 ~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vl 347 (785)
T PLN00148 268 DGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAAFLSKNIPSIPNSFYDSIPDPVFWPVFVI 347 (785)
T ss_pred ceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhh
Q 007854 163 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 242 (587)
Q Consensus 163 AtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~ 242 (587)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||+
T Consensus 348 AtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~ 427 (785)
T PLN00148 348 ATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACM 427 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHHhheeeccchhHHHhhhhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHHHH
Q 007854 243 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 322 (587)
Q Consensus 243 ~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~ 322 (587)
+||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++++++.
T Consensus 428 ~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~ 507 (785)
T PLN00148 428 TVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGWVPLVLSAIFMSIMYIWHYGTRKKYNFDL 507 (785)
T ss_pred eHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCC
Q 007854 323 REKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPK 402 (587)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~~~ 402 (587)
+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++|||+++|++++
T Consensus 508 ~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~ 587 (785)
T PLN00148 508 HNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPR 587 (785)
T ss_pred hcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCC
Confidence 99999999998888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhh---h---ccc-cCccccc-cccCCCCCCCC----
Q 007854 403 DYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALE---R---NLL-ESDLDSV-SVASRDPEASG---- 470 (587)
Q Consensus 403 ~~~~yr~vvryGY~d~~~~~~~~fe~~li~~L~~FI~~E~~~~~~~---~---~~~-~~~~~~~-~~~~~~~~~~~---- 470 (587)
+||+|||++||||||.+++ ++|||++|+++|++|||.|+.+...+ + |++ +++..+. ...++....++
T Consensus 588 ~yr~~r~vvryGy~d~~~~-~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (785)
T PLN00148 588 PYRMYRCIVRYGYKDIQRD-DGDFENMLVQSIAEFIQMEAEEPQSSASESSSNDGRMAVISTRDVQSSSLLMVSEQELAD 666 (785)
T ss_pred CceEEEEEEEEccCccccc-chHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999876 99999999999999999998532100 0 111 1100000 00000000000
Q ss_pred -CCCcccccccccccccccCCCCCCccccccccC-CCCccCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEecCCCChh
Q 007854 471 -SYGTEELKIPLMHERRFDESGTSASEETTSALP-SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFL 548 (587)
Q Consensus 471 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~vkar~~Ss~l 548 (587)
.++..+.+....+...+.++.+++...++++++ ..+++.+.+++++||+++|++|||+||+||+||++|||||+|+|+
T Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~ 746 (785)
T PLN00148 667 IDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFL 746 (785)
T ss_pred cccccccccccccccccccccccccccccccceeecccccccccchHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHH
Confidence 000000000000001111111111122344555 333334456889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007854 549 KKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 587 (587)
Q Consensus 549 KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 587 (587)
||++||++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 747 KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 747 KKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999997
No 2
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=1.2e-195 Score=1620.24 Aligned_cols=581 Identities=69% Similarity=1.167 Sum_probs=516.4
Q ss_pred cccCCCCCeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCc
Q 007854 3 SQMDLFAGALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 82 (587)
Q Consensus 3 ~~~~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~ 82 (587)
..|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+|||||||+|+++||++||+
T Consensus 265 ~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~ 344 (852)
T PLN00151 265 GVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNST 344 (852)
T ss_pred cCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHH
Q 007854 83 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 162 (587)
Q Consensus 83 ~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vl 162 (587)
+||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||+++|+|++||+|++
T Consensus 345 ~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vl 424 (852)
T PLN00151 345 KAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLI 424 (852)
T ss_pred ceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhh
Q 007854 163 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 242 (587)
Q Consensus 163 AtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~ 242 (587)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||+
T Consensus 425 AtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~ 504 (852)
T PLN00151 425 ANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEV 504 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHHHH
Q 007854 243 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 322 (587)
Q Consensus 243 ~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~ 322 (587)
+||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++++++.
T Consensus 505 ~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~ 584 (852)
T PLN00151 505 GVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEV 584 (852)
T ss_pred hhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCC
Q 007854 323 REKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPK 402 (587)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~~~ 402 (587)
+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++|||+++|++++
T Consensus 585 ~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~ 664 (852)
T PLN00151 585 RQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPK 664 (852)
T ss_pred hcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCC
Confidence 99999999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCCccccccccc
Q 007854 403 DYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLM 482 (587)
Q Consensus 403 ~~~~yr~vvryGY~d~~~~~~~~fe~~li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (587)
++|+|||++||||||.++++++|||++|+++|++|||.|+.+...+++.++..+++.+.+.......++.+....+.+..
T Consensus 665 ~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (852)
T PLN00151 665 DYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLL 744 (852)
T ss_pred CCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCCCccccccccccc
Confidence 99999999999999998634899999999999999999985321111110000000000000000000000000000000
Q ss_pred ccccccC-CCC---CCccc---cccccCCCCccCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEecCCCChhHHHHHHH
Q 007854 483 HERRFDE-SGT---SASEE---TTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINY 555 (587)
Q Consensus 483 ~~~~~~~-~~~---~~~~~---~~~~v~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKK~vIn~ 555 (587)
....+.. +.+ .+.+. ..++++ ..+.++++++|+++|++|||+||+||+||++|||||+|+|+||++||+
T Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~ 820 (852)
T PLN00151 745 ADYRLTSKPIPEASTSEEVSPVLPSSSM----SSDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINY 820 (852)
T ss_pred cccccccccccccccccccccccccccc----ccccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHH
Confidence 0000000 000 00000 001111 123357899999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007854 556 FYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 587 (587)
Q Consensus 556 ~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 587 (587)
+|+|||||||+|.++|+|||++||||||+|||
T Consensus 821 ~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 821 FYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999997
No 3
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=2e-194 Score=1610.70 Aligned_cols=574 Identities=49% Similarity=0.903 Sum_probs=515.9
Q ss_pred cccCCCCCeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCc
Q 007854 3 SQMDLFAGALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 82 (587)
Q Consensus 3 ~~~~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~ 82 (587)
..|++++++||+|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||||+||+|+++||++||+
T Consensus 205 ~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~ 284 (779)
T PLN00150 205 ASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGR 284 (779)
T ss_pred cCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHH
Q 007854 83 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 162 (587)
Q Consensus 83 ~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vl 162 (587)
+||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++
T Consensus 285 ~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vl 364 (779)
T PLN00150 285 QGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVL 364 (779)
T ss_pred ceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhh
Q 007854 163 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 242 (587)
Q Consensus 163 AtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~ 242 (587)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+||+
T Consensus 365 AtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~ 444 (779)
T PLN00150 365 ATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVV 444 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHHHH
Q 007854 243 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 322 (587)
Q Consensus 243 ~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~ 322 (587)
+||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||++++++++.
T Consensus 445 ~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~ 524 (779)
T PLN00150 445 GVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEM 524 (779)
T ss_pred hhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCC
Q 007854 323 REKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPK 402 (587)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~~~ 402 (587)
+|++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||+|||++|+|+||++|||+++|++++
T Consensus 525 ~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~ 604 (779)
T PLN00150 525 QHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPR 604 (779)
T ss_pred hcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCC
Confidence 99999999988888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCCccccccccc
Q 007854 403 DYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLM 482 (587)
Q Consensus 403 ~~~~yr~vvryGY~d~~~~~~~~fe~~li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (587)
+|++|||++||||||+.++ ++|||++|+++|++|||+|+.+...+++..+++.+..+...+. .++. +....+.+..
T Consensus 605 ~~r~~r~vvryGy~d~~~d-~~dFE~~LvesL~~FIr~e~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~ 680 (779)
T PLN00150 605 AYSMYRCAARYGYTDLEKK-DDNFEQLLIASLERFIEIESFREQSDLESMAASWTPEELMGEG--NSVG-SGLFTQYDQS 680 (779)
T ss_pred CceEEEEEEEEccCcCccc-chHHHHHHHHHHHHHHHhhhhcccccccccccccccccccccC--Cccc-cccccccccc
Confidence 9999999999999999876 8999999999999999999753222221111110000000000 0000 0000000000
Q ss_pred -ccccccCCCCCCccccccccCCCCccCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEecCCCChhHHHHHHHHHHHHh
Q 007854 483 -HERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLR 561 (587)
Q Consensus 483 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKK~vIn~~Y~FLR 561 (587)
...++.. +.+.+. .++++ ..+.+++++||+++|++|||+||+||+||++|||||+|+|+||++||++|+|||
T Consensus 681 ~~~~~~~~-~~~~~~--~~~~~----~~~~~~~v~eEl~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLR 753 (779)
T PLN00150 681 DINFATSQ-EWKRPS--SQEDS----VSGHSSDTQDEVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLR 753 (779)
T ss_pred cccccccc-cccccc--ccccc----cccccccHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHH
Confidence 0000000 010000 11111 123357899999999999999999999999999999999999999999999999
Q ss_pred hhccCCCccccCCCCCeEEeeeEEEC
Q 007854 562 RNCRAGAANMSVPHMNILQVGMTYMV 587 (587)
Q Consensus 562 kNcR~~~~~L~IPh~~LlEVGmvY~v 587 (587)
||||+|.++|+|||+|||||||+|||
T Consensus 754 kNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 754 RISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=4.1e-194 Score=1610.69 Aligned_cols=577 Identities=47% Similarity=0.820 Sum_probs=512.8
Q ss_pred cCCCC-CeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcc
Q 007854 5 MDLFA-GALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKD 83 (587)
Q Consensus 5 ~~~~~-~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~~ 83 (587)
|+..+ ..|++|||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||||+||+|+++||++||++
T Consensus 190 ~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~ 269 (779)
T PLN00149 190 SKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRG 269 (779)
T ss_pred CCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCc
Confidence 44445 44599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCC---cccCcccccccCcchHHHH
Q 007854 84 AWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD---SANRIFYDSVPDSLFWPVF 160 (587)
Q Consensus 84 g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~---~~~npFf~~~P~~~~~P~~ 160 (587)
||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||+ +++||||+++|+|++||++
T Consensus 270 g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~ 349 (779)
T PLN00149 270 GWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVL 349 (779)
T ss_pred eeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHHHHhcCcchhccccCcHHHhCCchhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999996 5667999999999999999
Q ss_pred HHHHHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhch
Q 007854 161 VLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIA 240 (587)
Q Consensus 161 vlAtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGia 240 (587)
++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||||||+|
T Consensus 350 vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiA 429 (779)
T PLN00149 350 VIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTKRLGNASGLA 429 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHHHHHHHHHHHHhheeEecChHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 007854 241 EVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRS 320 (587)
Q Consensus 241 V~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~ 320 (587)
|++||++||||+++||+.+|+||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++||||+++++++
T Consensus 430 V~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~ 509 (779)
T PLN00149 430 VITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEF 509 (779)
T ss_pred hehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEec
Q 007854 321 EVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVG 400 (587)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~ 400 (587)
+.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||++||||||++|+|+||++|||+++|++
T Consensus 510 ~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~ 589 (779)
T PLN00149 510 DVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIG 589 (779)
T ss_pred HhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEec
Confidence 99999999999998888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhh------ccc-cCc-cccccccCCCCCCCCCC
Q 007854 401 PKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALER------NLL-ESD-LDSVSVASRDPEASGSY 472 (587)
Q Consensus 401 ~~~~~~yr~vvryGY~d~~~~~~~~fe~~li~~L~~FI~~E~~~~~~~~------~~~-~~~-~~~~~~~~~~~~~~~~~ 472 (587)
++++|+|||++||||||..++ ++|||++|+++|++|||.|+.+...++ |++ +++ +++.+..+.....++.+
T Consensus 590 ~~~~~~~r~vvryGy~d~~~d-~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (779)
T PLN00149 590 PKEYRLYRCIVRYGYRDVHKD-DMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLEGIQLREDDSD 668 (779)
T ss_pred CCCceEEEEEEEEeecccccc-chHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999876 999999999999999999974211111 111 110 00000000000000000
Q ss_pred CcccccccccccccccCCCCCCccccccccC-CCCccCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEecCCCChhHHH
Q 007854 473 GTEELKIPLMHERRFDESGTSASEETTSALP-SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKL 551 (587)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKK~ 551 (587)
+....+.+. .++.. ....+..+++++ ..+++.+.+++++||+++|++|||+||+||+||++|||||+|+|+||+
T Consensus 669 ~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~ 743 (779)
T PLN00149 669 KQEPAGTSE---LREIR--SPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAREAGMAYILGHSYVRAKQGSSMMKKL 743 (779)
T ss_pred ccccccccc---ccccc--CccccCcccceeeccccccccchhHHHHHHHHHHHHHcCcEEEecCceEEEcCCCcHHHHH
Confidence 000000000 00000 000011124455 333444556889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCCCccccCCCCCeEEeeeEEEC
Q 007854 552 VINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 587 (587)
Q Consensus 552 vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v 587 (587)
+||++|+|||||||+|.++|+|||+|||||||+|||
T Consensus 744 vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 744 VINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=1.8e-175 Score=1452.25 Aligned_cols=529 Identities=42% Similarity=0.781 Sum_probs=501.5
Q ss_pred cccCCCCCeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCc
Q 007854 3 SQMDLFAGALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 82 (587)
Q Consensus 3 ~~~~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~ 82 (587)
..|++++++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||||+||+||++||.+||.
T Consensus 159 ~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~ 238 (688)
T TIGR00794 159 VAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGT 238 (688)
T ss_pred cCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHH
Q 007854 83 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 162 (587)
Q Consensus 83 ~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vl 162 (587)
.||.+||||+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++
T Consensus 239 ~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vl 318 (688)
T TIGR00794 239 VGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFII 318 (688)
T ss_pred ceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhh
Q 007854 163 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 242 (587)
Q Consensus 163 AtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~ 242 (587)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||+
T Consensus 319 AtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt 398 (688)
T TIGR00794 319 ATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVT 398 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHHHH
Q 007854 243 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 322 (587)
Q Consensus 243 ~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~ 322 (587)
+||++||+|+++||+.+|+||++++++|+++|+.+|+.|||||+.|++||||+||++|++++++|++|+||++++++++.
T Consensus 399 ~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~ 478 (688)
T TIGR00794 399 GTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDH 478 (688)
T ss_pred hhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcC-CCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecC
Q 007854 323 REKISMDFLLDLGS-TLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGP 401 (587)
Q Consensus 323 ~~~~~~~~~~~~~~-~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~~ 401 (587)
++++|++++++.+. +.+.+|+||+|+|||++++++|++|.||++|||++||++||+||+++|+|+||++||++++++++
T Consensus 479 ~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~ 558 (688)
T TIGR00794 479 EHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGP 558 (688)
T ss_pred hcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcC
Confidence 99999999988554 34458999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCCcccccccc
Q 007854 402 KDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPL 481 (587)
Q Consensus 402 ~~~~~yr~vvryGY~d~~~~~~~~fe~~li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (587)
++ |+|||++||||||+++. +++|+++++++|++|++++..+...+. + . . +
T Consensus 559 ~~-g~~rv~~~yGf~e~~~~-~~~l~~~ii~~L~~fi~~~~~~~~~~~--------~-----~------------~--~- 608 (688)
T TIGR00794 559 TE-GMYRCVIRYGFMDTPNE-PKELAAHIVNSIVEFVEHECGFNLNNL--------E-----E------------L--S- 608 (688)
T ss_pred CC-CEEEEEEEecCCcCCCc-HHHHHHHHHHHHHHHHHHHhhhccccc--------c-----c------------c--c-
Confidence 54 89999999999999998 889999999999999998653100000 0 0 0 0
Q ss_pred cccccccCCCCCCccccccccCCCCccCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEecCCCChhHHHHHHHHHHHHh
Q 007854 482 MHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLR 561 (587)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKK~vIn~~Y~FLR 561 (587)
.. +.+.+.+||++++++|+|+||+|++||++++++++|+++||+.||++|.|||
T Consensus 609 ------------~~--------------~~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~ 662 (688)
T TIGR00794 609 ------------DK--------------RCRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIR 662 (688)
T ss_pred ------------cc--------------ccccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHH
Confidence 00 0011358999999999999999999999999999999999999999999999
Q ss_pred hhccCCCccccCCCCCeEEeeeEEEC
Q 007854 562 RNCRAGAANMSVPHMNILQVGMTYMV 587 (587)
Q Consensus 562 kNcR~~~~~L~IPh~~LlEVGmvY~v 587 (587)
||||++...++|||+|++||||.||+
T Consensus 663 rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 663 RNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred HhccChhhheeCChhhEEEEeeEEEC
Confidence 99999999999999999999999986
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=9.3e-159 Score=1301.63 Aligned_cols=484 Identities=32% Similarity=0.579 Sum_probs=457.6
Q ss_pred ccCCCCCeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcc
Q 007854 4 QMDLFAGALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKD 83 (587)
Q Consensus 4 ~~~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~~ 83 (587)
.|++ +++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+|+++||.+||..
T Consensus 136 ~p~l-~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~ 213 (622)
T PRK10745 136 APQL-DTYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLEYKTV 213 (622)
T ss_pred CCCC-CCccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHhCCCc
Confidence 5888 568999999999999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred hhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHHH
Q 007854 84 AWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLA 163 (587)
Q Consensus 84 g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vlA 163 (587)
||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++|
T Consensus 214 gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~viLA 293 (622)
T PRK10745 214 SFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPLLILA 293 (622)
T ss_pred eEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhh
Q 007854 164 ALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVG 243 (587)
Q Consensus 164 tlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~ 243 (587)
|+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||++||+|||+||++
T Consensus 294 TlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~ 373 (622)
T PRK10745 294 TLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGIAVTG 373 (622)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhhhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHHHHh
Q 007854 244 VMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVR 323 (587)
Q Consensus 244 ~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~ 323 (587)
||++||+|++++++.+|+|+++++++++++|+.+|+.||+||+.|++||||+|+++|++++++|++|++|++++++++.+
T Consensus 374 tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~ 453 (622)
T PRK10745 374 TMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLRRMHE 453 (622)
T ss_pred HhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCC
Q 007854 324 EKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKD 403 (587)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~~~~ 403 (587)
+++|++++++.+++.++.|+||+|+|+|+..+++|+++.||+||||++||++||+||+++|+|+||++||++++++++
T Consensus 454 ~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l~~-- 531 (622)
T PRK10745 454 HGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQLSP-- 531 (622)
T ss_pred cCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEECC--
Confidence 999999999998877878999999999999999999999999999999999999999999999999999999999996
Q ss_pred CcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCCcccccccccc
Q 007854 404 YHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMH 483 (587)
Q Consensus 404 ~~~yr~vvryGY~d~~~~~~~~fe~~li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (587)
|+|||++||||||+|+. ++.+ +...+ ++ . ..
T Consensus 532 -g~~rv~~~yGf~e~~~i-~~~L------------~~~~~------~g-------------~--~~-------------- 562 (622)
T PRK10745 532 -TFWRVVASYGWRETPNV-EEVF------------HRCGL------EG-------------L--SC-------------- 562 (622)
T ss_pred -CEEEEEEEecCCCCCCH-HHHH------------HHHHh------CC-------------C--CC--------------
Confidence 79999999999999875 3221 11000 00 0 00
Q ss_pred cccccCCCCCCccccccccCCCCccCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEecCCCC---hhHHHHHHHHHHHH
Q 007854 484 ERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSF---FLKKLVINYFYAFL 560 (587)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~vkar~~Ss---~lKK~vIn~~Y~FL 560 (587)
| -+.++|.+||+.+...++++ |-| .+|.||
T Consensus 563 ----------------------------------~--------~~~~s~fl~r~~l~~~~~~~m~~wr~-----~lF~~m 595 (622)
T PRK10745 563 ----------------------------------R--------MMETSFFMSHESLILGKRPWYLRLRG-----KLFLLL 595 (622)
T ss_pred ----------------------------------C--------ccceEEEEeeEEEEeCCCCCcHHHHH-----HHHHHH
Confidence 0 03689999999999888887 444 389999
Q ss_pred hhhccCCCccccCCCCCeEEeeeEEEC
Q 007854 561 RRNCRAGAANMSVPHMNILQVGMTYMV 587 (587)
Q Consensus 561 RkNcR~~~~~L~IPh~~LlEVGmvY~v 587 (587)
.||++++...+++|++|++|+|+.+|+
T Consensus 596 ~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 596 QRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 999999999999999999999999885
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=7.8e-150 Score=1221.97 Aligned_cols=411 Identities=44% Similarity=0.803 Sum_probs=405.9
Q ss_pred cccCCCCCeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCc
Q 007854 3 SQMDLFAGALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 82 (587)
Q Consensus 3 ~~~~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~ 82 (587)
..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ +|+||+|+||+|+++||.+||+
T Consensus 124 ~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~ 201 (534)
T PF02705_consen 124 ATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGW 201 (534)
T ss_pred cCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCC
Confidence 357777 99999999999999999999999999999999999999999999999999 5999999999999999999999
Q ss_pred chhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHH
Q 007854 83 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 162 (587)
Q Consensus 83 ~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vl 162 (587)
.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++
T Consensus 202 ~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~il 281 (534)
T PF02705_consen 202 IGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVIL 281 (534)
T ss_pred chhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhh
Q 007854 163 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 242 (587)
Q Consensus 163 AtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~ 242 (587)
||+||||||||+|||+||+++||++||||||+||+|||++.+||||||+|||+||++|++++++||||++||+|||+||+
T Consensus 282 AtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt 361 (534)
T PF02705_consen 282 ATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVT 361 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHHHH
Q 007854 243 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 322 (587)
Q Consensus 243 ~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~ 322 (587)
+||++||+|++++++.+||||.+++++++++|+.+|+.||+||+.|++||||+||++|++++++|++|+||+++++++++
T Consensus 362 ~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~ 441 (534)
T PF02705_consen 362 GTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFER 441 (534)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCC
Q 007854 323 REKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPK 402 (587)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~~~ 402 (587)
++++++++++++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|+|++++|+|+||++||++++++++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~- 520 (534)
T PF02705_consen 442 ENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP- 520 (534)
T ss_pred hcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCcEEEEEEEEeecc
Q 007854 403 DYHMFRCVTRYGYKD 417 (587)
Q Consensus 403 ~~~~yr~vvryGY~d 417 (587)
+|+|||++||||||
T Consensus 521 -~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 521 -DGFYRVTLRYGFME 534 (534)
T ss_pred -CCEEEEEEEecCCC
Confidence 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-145 Score=1169.70 Aligned_cols=485 Identities=35% Similarity=0.621 Sum_probs=459.1
Q ss_pred CCCCeehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcchhh
Q 007854 7 LFAGALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS 86 (587)
Q Consensus 7 ~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~ 86 (587)
.-+++|+|||++||++||++||+||++||++|||||++||+++|+.|++||.+ ||+||+|+||+||++|+.++|..||+
T Consensus 143 ~~~~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf~ 221 (627)
T COG3158 143 ALDPYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLLEEGFVGFF 221 (627)
T ss_pred cccCccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEEE
Confidence 34499999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred hcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHHHHHH
Q 007854 87 ALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALA 166 (587)
Q Consensus 87 ~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlA 166 (587)
.||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++|||+..||||.++|+|++||+++|||+|
T Consensus 222 vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~A 301 (627)
T COG3158 222 VLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIPLVILATAA 301 (627)
T ss_pred EeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHH
Q 007854 167 AMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVML 246 (587)
Q Consensus 167 tIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~ 246 (587)
|||||||+|||+||+++||++||++||+||.|||+++.||||||.|||+|++++++++++||+|++||+|||+|||++|+
T Consensus 302 TVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~ 381 (627)
T COG3158 302 TVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMV 381 (627)
T ss_pred HHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhChheeehhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHHHHHHHHHhhHhHHHHHHHHHhcCC
Q 007854 247 VSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKI 326 (587)
Q Consensus 247 iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~ 326 (587)
|||+|++.+++..|||+.+.+.++.++|+.+|..||+||+.|++||||+|+++|++++++|.||++|+++.+++.+++++
T Consensus 382 iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i 461 (627)
T COG3158 382 ITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENGI 461 (627)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcE
Q 007854 327 SMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHM 406 (587)
Q Consensus 327 ~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lhevvVfv~I~~~~vP~V~~~eR~~v~~l~~~~~~~ 406 (587)
|+|.+++.+++.++.|+|||++|+|+..+.+|.++.|++|||+++||++||+|+++.++|+|+++||++++++++ ++
T Consensus 462 ~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~l~~---~f 538 (627)
T COG3158 462 PLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQLSD---DF 538 (627)
T ss_pred CHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeeeccC---ce
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 69
Q ss_pred EEEEEEEeeccccccChhHHHHHHHHHHHHHHHHhhhhHHhhhccccCccccccccCCCCCCCCCCCccccccccccccc
Q 007854 407 FRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPLMHERR 486 (587)
Q Consensus 407 yr~vvryGY~d~~~~~~~~fe~~li~~L~~FI~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (587)
+|+.++|||||+|+. ++. |.. ++.+ + -
T Consensus 539 ~rV~l~~Gfme~pnv-p~~--------l~~-~~~~---------G-----------------~----------------- 565 (627)
T COG3158 539 VRVVLHFGFMETPNV-PRA--------LRL-CRKK---------G-----------------L----------------- 565 (627)
T ss_pred EEEEEEeeccCCCCH-HHH--------HHH-Hhhc---------C-----------------c-----------------
Confidence 999999999999976 221 111 1100 0 0
Q ss_pred ccCCCCCCccccccccCCCCccCCCCccHHHHHHHHHHHHhCCcEEEeeecEEEecCCCChhHHHHHHHHHHHHhhhccC
Q 007854 487 FDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRA 566 (587)
Q Consensus 487 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~v~eEl~~L~~A~eaGVvYIlG~s~vkar~~Ss~lKK~vIn~~Y~FLRkNcR~ 566 (587)
+-| -....|.+|++.+++++.|++.+ +.. -.|..|.||.-+
T Consensus 566 -----------------------------~f~--------im~tsFfl~re~l~~~~~~g~~~-w~~-~lfi~l~r~aa~ 606 (627)
T COG3158 566 -----------------------------KFD--------IMETSFFLSRESLIASKNSGMPR-WRD-RLFIALARNAAS 606 (627)
T ss_pred -----------------------------eec--------ccceEEEEEeeeeecCCCCCchH-HHH-HHHHHHHHhcCC
Confidence 000 02467999999999999999876 554 699999999999
Q ss_pred CCccccCCCCCeEEeeeEEEC
Q 007854 567 GAANMSVPHMNILQVGMTYMV 587 (587)
Q Consensus 567 ~~~~L~IPh~~LlEVGmvY~v 587 (587)
+...+++|.+|++|+|-.-|+
T Consensus 607 ~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 607 PTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred HHHhhCCCCCcEEEeeeeeeC
Confidence 999999999999999966553
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.49 E-value=0.53 Score=52.37 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=44.6
Q ss_pred ehhHHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcchhh-h
Q 007854 12 LVIVSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS-A 87 (587)
Q Consensus 12 vv~is~~ILv~LF~~Q~~GT~kvg~---~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~-~ 87 (587)
...+++++++++..+.-+|....++ .+.-+.++=++.+.+.|++.+.+.++. ..+|...+.-. .++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHH
Confidence 3467788888889999999765543 333332222233344555544321111 11222111000 02233444 5
Q ss_pred cccchhhhcchhhhh
Q 007854 88 LGGCVLCITGAEAMF 102 (587)
Q Consensus 88 LG~v~L~iTG~EAly 102 (587)
+..++.+.+|-|+.=
T Consensus 241 ~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 241 FYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHhHHHHh
Confidence 677788888988653
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=88.80 E-value=13 Score=40.00 Aligned_cols=179 Identities=16% Similarity=0.125 Sum_probs=99.2
Q ss_pred eehhHHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcchhhhccc
Q 007854 11 ALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGG 90 (587)
Q Consensus 11 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~~~LG~ 90 (587)
....++.+++++++.++-+|....++...-..++=++.+..+++..+..++......+++... .......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 466789999999999999999888876665555555555555555555433322222221111 00000123445666
Q ss_pred chhhhcchhhh--hhc-cCCCccccceehhhhhHhHHHHHHhccchhhhccCCC-ccc-----Ccccc---ccc-CcchH
Q 007854 91 CVLCITGAEAM--FAD-LGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD-SAN-----RIFYD---SVP-DSLFW 157 (587)
Q Consensus 91 v~L~iTG~EAl--yAD-lGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~-~~~-----npFf~---~~P-~~~~~ 157 (587)
++.+.+|-|+. +|+ +=+ .+|.|-.|-..-..-+.++-.+++.+....-|. +.. +|+.. ... .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 78899998864 332 333 445565555443333333333333333333332 111 44432 223 35555
Q ss_pred HHHHHHHHHHHHhhhhhhcchhhHHHHHHHhCCCCc
Q 007854 158 PVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 193 (587)
Q Consensus 158 P~~vlAtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr 193 (587)
-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 556666666666666667776677777778899998
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=84.33 E-value=22 Score=38.51 Aligned_cols=168 Identities=15% Similarity=0.112 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHhhcccccccc---ccchhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHHHHhcCcchh-hhcc
Q 007854 14 IVSIIILVALFSIQRFGTGKV---GFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAW-SALG 89 (587)
Q Consensus 14 ~is~~ILv~LF~~Q~~GT~kv---g~~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f~~~~~~~g~-~~LG 89 (587)
.++++++++...+..+|.... ...++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 456677777888888886554 45666665554444445555432 22222222221 22232 2244
Q ss_pred cchhhhcchhhhhh--ccCCCccccceehhhhhHhHHHHHHhccchhhhccC-C-C---cccCcccc----cccCcchHH
Q 007854 90 GCVLCITGAEAMFA--DLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKY-P-D---SANRIFYD----SVPDSLFWP 158 (587)
Q Consensus 90 ~v~L~iTG~EAlyA--DlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~-p-~---~~~npFf~----~~P~~~~~P 158 (587)
..+.+.+|-|+.-. +-=+-.+|.+..|-..-+. ...+.|+.-....... | + +.++|+.. ...++.-+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~-~~~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI-VVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 45677778887643 3334455666665543222 2222244332222211 1 1 12234322 222333333
Q ss_pred HHHHHHHHHHHhhhhhhcchhhHHHHHHHhCCCCce
Q 007854 159 VFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 194 (587)
Q Consensus 159 ~~vlAtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 194 (587)
+.+.+.++..-+..+.+.+.=-+....-+.|.+|+.
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 444444444444444444444444445578999973
No 12
>TIGR00930 2a30 K-Cl cotransporter.
Probab=81.89 E-value=93 Score=38.34 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=20.7
Q ss_pred ehhHHHHHHHHHHhhccccccccccchhhHHHH
Q 007854 12 LVIVSIIILVALFSIQRFGTGKVGFMFAPVLAL 44 (587)
Q Consensus 12 vv~is~~ILv~LF~~Q~~GT~kvg~~F~PIm~~ 44 (587)
+-.++++++++++.+--+|....+ -+..++++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~a-k~q~vl~v 234 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWEN-KAQVLFLV 234 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHH
Confidence 345777888888888888885444 33444333
No 13
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=81.56 E-value=39 Score=37.37 Aligned_cols=37 Identities=19% Similarity=0.065 Sum_probs=20.5
Q ss_pred chhhhcccchhhhcchhhh--hhccCCCccccceehhhh
Q 007854 83 DAWSALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTL 119 (587)
Q Consensus 83 ~g~~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~ 119 (587)
.++...++++.+.+|-|.. +|+==+-.+|.+-.|-..
T Consensus 195 ~~~~~~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~ 233 (474)
T TIGR03813 195 DNVVLAASIFLFYAGMEMNAVHVKDVDNPDKNYPIAILI 233 (474)
T ss_pred ccHHHHHHHHHHHhchhHhHHHHHhccCcccchhHHHHH
Confidence 3344444566788888853 444334455665555444
No 14
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=78.33 E-value=48 Score=36.30 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhhccccccccccc
Q 007854 15 VSIIILVALFSIQRFGTGKVGFM 37 (587)
Q Consensus 15 is~~ILv~LF~~Q~~GT~kvg~~ 37 (587)
++++++.++..+.-+|+...+.+
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 35566667888999998876664
No 15
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=78.31 E-value=18 Score=39.93 Aligned_cols=21 Identities=24% Similarity=0.604 Sum_probs=16.3
Q ss_pred ccHHHHHHHHHHHHHHHhhHh
Q 007854 293 GWLPLAFASVFLCVMYIWNYG 313 (587)
Q Consensus 293 GW~pl~ia~~~~~iM~~W~~G 313 (587)
-|.+++++.++...+..|...
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~ 474 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYK 474 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEe
Confidence 599999988887777777653
No 16
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=73.23 E-value=91 Score=35.75 Aligned_cols=44 Identities=14% Similarity=0.308 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhh
Q 007854 13 VIVSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYN 56 (587)
Q Consensus 13 v~is~~ILv~LF~~Q~~GT~kvg~---~F~PIm~~Wf~~i~~~Gi~n 56 (587)
..+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 162 ~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 162 DFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred hHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 446677777777888899766554 34444444444455555543
No 17
>PRK15049 L-asparagine permease; Provisional
Probab=72.94 E-value=62 Score=36.41 Aligned_cols=23 Identities=9% Similarity=0.118 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHhhcccccccccc
Q 007854 14 IVSIIILVALFSIQRFGTGKVGF 36 (587)
Q Consensus 14 ~is~~ILv~LF~~Q~~GT~kvg~ 36 (587)
.++.++++++..+.-+|....+.
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777788888888766554
No 18
>PRK10655 potE putrescine transporter; Provisional
Probab=72.04 E-value=77 Score=34.54 Aligned_cols=43 Identities=16% Similarity=0.061 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHhhccccccccccc---hhhHHHHHHHHHHHhhhhh
Q 007854 14 IVSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYN 56 (587)
Q Consensus 14 ~is~~ILv~LF~~Q~~GT~kvg~~---F~PIm~~Wf~~i~~~Gi~n 56 (587)
.++.++++.+..+.-+|+...+++ ..-..++-++.+...|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677788999997665553 2333334444444555443
No 19
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=71.22 E-value=17 Score=38.99 Aligned_cols=223 Identities=15% Similarity=0.181 Sum_probs=120.4
Q ss_pred ehhHHHHHHHHHHhhccccccccccc---hhhHHH-HHHHHHHHhhhhhhcccCcce-----eeecChHHHHHHHHhcCc
Q 007854 12 LVIVSIIILVALFSIQRFGTGKVGFM---FAPVLA-LWFFSLGSIGLYNLVKYDISV-----VRAFNPIYIYLFFKKNGK 82 (587)
Q Consensus 12 vv~is~~ILv~LF~~Q~~GT~kvg~~---F~PIm~-~Wf~~i~~~Gi~ni~~~~p~V-----l~A~nP~y~~~f~~~~~~ 82 (587)
...++.++++..+.+.-+|....+++ .+=+.+ +-++.+.+.|++...+ +..- ....+|. +.
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~ 187 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF-SGFNSLSFSLSTFFPS---------GW 187 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-CHHH----SHSCSSCS---------SS
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc-cccccccccccccCCc---------cc
Confidence 45678888888899999997666544 333333 4555566667765533 1111 1112222 11
Q ss_pred c-hhhhcccchhhhcchhhhhhccCCCccccceehhhhhHhHHHHHHhccchhhhccCCC---c-ccC------cccccc
Q 007854 83 D-AWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD---S-ANR------IFYDSV 151 (587)
Q Consensus 83 ~-g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~~~p~---~-~~n------pFf~~~ 151 (587)
. -+..++..+.+.+|-|+.=.-.+-.-+|.+..|=..-+.-+.++.-+..-++...-|. + .+| .+++..
T Consensus 188 ~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (426)
T PF13520_consen 188 PGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAV 267 (426)
T ss_dssp SHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHH
T ss_pred cchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccc
Confidence 1 2455677788889988865554545456665554432332333222222333333221 1 111 233332
Q ss_pred -cCcchHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHhCCCCceeEeeCCCccCCccccchHHHHHHHHhh-eee--EEe
Q 007854 152 -PDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCV-VVV--SIF 227 (587)
Q Consensus 152 -P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~kivhTS~~~~GQIYiP~vNw~Lmi~~i-~v~--~~F 227 (587)
.++..+.+.+.+.++.+-+-.+.+.+.--++.+.-+-|.+|+ +..+++| +| .|..-.++...+. +.. ..|
T Consensus 268 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~ 341 (426)
T PF13520_consen 268 GGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLF 341 (426)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHh
Confidence 457788888888887777666667677677777888899994 2333332 22 2555444433332 222 223
Q ss_pred ---CCchhHHhhhhchhhhHHHHHHH
Q 007854 228 ---QSTTDIANAYGIAEVGVMLVSST 250 (587)
Q Consensus 228 ---~~s~~l~~AYGiaV~~~m~iTT~ 250 (587)
++-+.+.+.+.+......+++.+
T Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~~~~~ 367 (426)
T PF13520_consen 342 IPQSSFDILVSLSSVGYLISYILVIL 367 (426)
T ss_dssp SSSSHHHHHHHHHHHHTHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23356677666666666666533
No 20
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=64.64 E-value=2.2e+02 Score=31.56 Aligned_cols=44 Identities=7% Similarity=-0.203 Sum_probs=28.5
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHhCCCCce
Q 007854 151 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 194 (587)
Q Consensus 151 ~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 194 (587)
..++..+.+.+.+.+++.-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34455555555555555555666666666667777788999965
No 21
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=64.37 E-value=66 Score=33.66 Aligned_cols=51 Identities=16% Similarity=0.215 Sum_probs=38.4
Q ss_pred HhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHHHHHHH
Q 007854 234 ANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGS----VELLYMSA 284 (587)
Q Consensus 234 ~~AYGiaV~~~m~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~----ie~~f~sa 284 (587)
=..||.+|..+.++.++-++..+..+.+.+++.++++.++++. +|-..+|+
T Consensus 15 ~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss 69 (301)
T PF14362_consen 15 YAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSS 69 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3478999999999999888888888898887777776666554 55555554
No 22
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=61.94 E-value=1.1e+02 Score=33.33 Aligned_cols=24 Identities=13% Similarity=0.505 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHhhccccccccccc
Q 007854 14 IVSIIILVALFSIQRFGTGKVGFM 37 (587)
Q Consensus 14 ~is~~ILv~LF~~Q~~GT~kvg~~ 37 (587)
.+++++++.+..+.-+|.+..+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 355666667778888888776654
No 23
>PRK10746 putative transport protein YifK; Provisional
Probab=59.97 E-value=2.4e+02 Score=31.28 Aligned_cols=26 Identities=15% Similarity=0.060 Sum_probs=17.8
Q ss_pred ccHHHHHHHHHHHHHHHhhHhHHHHH
Q 007854 293 GWLPLAFASVFLCVMYIWNYGSVLKY 318 (587)
Q Consensus 293 GW~pl~ia~~~~~iM~~W~~G~~~~~ 318 (587)
.......+.+++.+++.+....+.-+
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~~ 452 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLNR 452 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45677788888887777776654443
No 24
>PRK10238 aromatic amino acid transporter; Provisional
Probab=58.26 E-value=1.5e+02 Score=32.79 Aligned_cols=113 Identities=17% Similarity=0.131 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhhccc--Ccc-eeeecChHHHHHHHHhcCcchh-hh
Q 007854 15 VSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKY--DIS-VVRAFNPIYIYLFFKKNGKDAW-SA 87 (587)
Q Consensus 15 is~~ILv~LF~~Q~~GT~kvg~---~F~PIm~~Wf~~i~~~Gi~ni~~~--~p~-Vl~A~nP~y~~~f~~~~~~~g~-~~ 87 (587)
.+++++++++.+.-+|+...|. .+.-+-++-++.+-++|+.-+... +|. .+.-+.+. .-+..++..|+ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566777888888766553 333333333333333344332221 121 11110000 00011222222 23
Q ss_pred cccchhhhcchhh--hhhccCCCccccceehhhhhHhHHHHHHhcc
Q 007854 88 LGGCVLCITGAEA--MFADLGHFSVKAIQIAFTLVVFPCLLLAYMG 131 (587)
Q Consensus 88 LG~v~L~iTG~EA--lyADlGHF~~~~I~~aw~~~v~P~Lll~Y~G 131 (587)
++.++.+.+|-|+ ..|+=-+=.+|.+-.|-.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 5567788889987 4455456666777776543 33344555654
No 25
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=56.21 E-value=1.4e+02 Score=32.98 Aligned_cols=43 Identities=9% Similarity=-0.062 Sum_probs=23.8
Q ss_pred cCcchHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHhCCCCce
Q 007854 152 PDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 194 (587)
Q Consensus 152 P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 194 (587)
.++...-+.+.+.+++.-+.-+.+.+.=-+..+.-+-|.+|+.
T Consensus 279 g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~~ 321 (473)
T TIGR00905 279 GKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321 (473)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence 3333333333344444444455555665666666788999974
No 26
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=56.19 E-value=2e+02 Score=32.54 Aligned_cols=52 Identities=13% Similarity=0.137 Sum_probs=27.3
Q ss_pred hhhhcccchhhhcchhhh--hhccCCCccccceehhhhhHhHHHHHHhccchhh
Q 007854 84 AWSALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAY 135 (587)
Q Consensus 84 g~~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~ 135 (587)
++..+-+++.+.+|-|+. .|+==+-.+|.+-.|=...+.=+.++.++|--++
T Consensus 196 ~~~~~~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 196 TLVVFVAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 344444566778999875 4544455566555554443333444444443333
No 27
>PRK11021 putative transporter; Provisional
Probab=55.04 E-value=3e+02 Score=29.69 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=20.8
Q ss_pred ehhHHHHHHHHHHhhccccccccccch
Q 007854 12 LVIVSIIILVALFSIQRFGTGKVGFMF 38 (587)
Q Consensus 12 vv~is~~ILv~LF~~Q~~GT~kvg~~F 38 (587)
...+++++++++..+.-+|.+..+++-
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~ 141 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQ 141 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356777888888899999988777643
No 28
>PRK10249 phenylalanine transporter; Provisional
Probab=54.30 E-value=2.5e+02 Score=31.14 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhhcccCcceeeecChHHHHHH--HHhcCcch-hhhc
Q 007854 15 VSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLF--FKKNGKDA-WSAL 88 (587)
Q Consensus 15 is~~ILv~LF~~Q~~GT~kvg~---~F~PIm~~Wf~~i~~~Gi~ni~~~~p~Vl~A~nP~y~~~f--~~~~~~~g-~~~L 88 (587)
++.++++++..+.-+|....|. .++=+-++..+.+.++|+.-+...++.- ..++.+..+. +..+|..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 4566677777788888866554 2333334455555555655433312110 1111111000 00123333 3456
Q ss_pred ccchhhhcchhhh--hhccCCCccccceehhh
Q 007854 89 GGCVLCITGAEAM--FADLGHFSVKAIQIAFT 118 (587)
Q Consensus 89 G~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 118 (587)
..++.+.+|-|+. .|+=-+-.+|.|-.|-.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 6667888899965 66655666676665543
No 29
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=50.31 E-value=2.5e+02 Score=30.77 Aligned_cols=44 Identities=7% Similarity=0.156 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHhhcccccc---ccccchhhHHHHHHHHHHHhhhhhh
Q 007854 14 IVSIIILVALFSIQRFGTG---KVGFMFAPVLALWFFSLGSIGLYNL 57 (587)
Q Consensus 14 ~is~~ILv~LF~~Q~~GT~---kvg~~F~PIm~~Wf~~i~~~Gi~ni 57 (587)
.+++++++++..+.-+|.+ |+...+.=+.++=++.+.++|++..
T Consensus 129 ~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 129 FIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566667777788888875 4444444334444445555666543
No 30
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=49.76 E-value=18 Score=38.67 Aligned_cols=89 Identities=21% Similarity=0.469 Sum_probs=54.0
Q ss_pred HHHHHHHHHhhcccccccccc--chhhHHHHHHHHHHHhhhh---------------------hhcccCcceeeecChHH
Q 007854 16 SIIILVALFSIQRFGTGKVGF--MFAPVLALWFFSLGSIGLY---------------------NLVKYDISVVRAFNPIY 72 (587)
Q Consensus 16 s~~ILv~LF~~Q~~GT~kvg~--~F~PIm~~Wf~~i~~~Gi~---------------------ni~~~~p~Vl~A~nP~y 72 (587)
+|+.++=.|+-| +|-.++|+ +.|-+.+.|.++-...++- -++||-|+..
T Consensus 213 t~Iti~Qc~~ye-R~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa~------- 284 (372)
T KOG3145|consen 213 TVITILQCFFYE-RGWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQAY------- 284 (372)
T ss_pred HHHHHHHHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHh-------
Confidence 444444444444 46667776 6666777776554444332 1234433322
Q ss_pred HHHHHHhcCcchhhhcccchhhhcchhh-----------------hhhccCCCcccccee
Q 007854 73 IYLFFKKNGKDAWSALGGCVLCITGAEA-----------------MFADLGHFSVKAIQI 115 (587)
Q Consensus 73 ~~~f~~~~~~~g~~~LG~v~L~iTG~EA-----------------lyADlGHF~~~~I~~ 115 (587)
.=+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.-+.+
T Consensus 285 --mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi 341 (372)
T KOG3145|consen 285 --MNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSI 341 (372)
T ss_pred --hcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHH
Confidence 11345556788 68999999999975 689999998654433
No 31
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=49.53 E-value=16 Score=37.46 Aligned_cols=40 Identities=23% Similarity=0.660 Sum_probs=31.8
Q ss_pred HHHHHhHhccc------CCccHHHHHHHHHHHHHHHhhHhHHHHHH
Q 007854 280 LYMSAVLSKIA------EGGWLPLAFASVFLCVMYIWNYGSVLKYR 319 (587)
Q Consensus 280 ~f~sa~l~Kv~------~GGW~pl~ia~~~~~iM~~W~~G~~~~~~ 319 (587)
.|||+-..-+. +|||..+++++++..+..+|++--+.+.+
T Consensus 243 VFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~AR 288 (304)
T COG4059 243 VFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVKAR 288 (304)
T ss_pred hhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhhhh
Confidence 56666555555 89999999999999999999986665543
No 32
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=49.39 E-value=1.3e+02 Score=33.00 Aligned_cols=23 Identities=13% Similarity=0.265 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHhhcccccccccc
Q 007854 14 IVSIIILVALFSIQRFGTGKVGF 36 (587)
Q Consensus 14 ~is~~ILv~LF~~Q~~GT~kvg~ 36 (587)
.++.++++++..+.-+|+...++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~ 149 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITR 149 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHH
Confidence 34566666777888888766554
No 33
>PRK11387 S-methylmethionine transporter; Provisional
Probab=47.18 E-value=3.6e+02 Score=29.85 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=17.0
Q ss_pred hcccchhhhcchhhh--hhccCCCccccceehhh
Q 007854 87 ALGGCVLCITGAEAM--FADLGHFSVKAIQIAFT 118 (587)
Q Consensus 87 ~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 118 (587)
.+..++.+.+|-|.. .|+==+--+|.|-.|-.
T Consensus 211 ~~~~~~faf~G~e~~~~~a~E~knP~r~iPrAi~ 244 (471)
T PRK11387 211 TMVAVNFAFSGTELIGIAAGETENPAKVIPVAIR 244 (471)
T ss_pred HHHHHHHHHcCHHHHHHHHHHhcChhhHHHHHHH
Confidence 334456777787753 33333445555655533
No 34
>PRK10580 proY putative proline-specific permease; Provisional
Probab=46.85 E-value=2.9e+02 Score=30.39 Aligned_cols=24 Identities=8% Similarity=0.029 Sum_probs=18.0
Q ss_pred CCccHHHHHHHHHHHHHHHhhHhH
Q 007854 291 EGGWLPLAFASVFLCVMYIWNYGS 314 (587)
Q Consensus 291 ~GGW~pl~ia~~~~~iM~~W~~G~ 314 (587)
.+.++.+.++.+.+.+.+.+..-.
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~ 446 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFK 446 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 357778888888888888877653
No 35
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=43.68 E-value=1e+02 Score=30.72 Aligned_cols=21 Identities=5% Similarity=0.287 Sum_probs=16.8
Q ss_pred CccHHHHHHHHHHHHHHHhhH
Q 007854 292 GGWLPLAFASVFLCVMYIWNY 312 (587)
Q Consensus 292 GGW~pl~ia~~~~~iM~~W~~ 312 (587)
.+|.-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999888766653
No 36
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=38.24 E-value=20 Score=40.13 Aligned_cols=90 Identities=22% Similarity=0.376 Sum_probs=59.3
Q ss_pred HhCCCCceeEeeCCCccCC----ccccchHHHHHHHHhheeeEEeCCchhHHhhhhchhhhHHHHHHHHHHHHHH-----
Q 007854 187 ALGCFPRLKIIHTSRKRMG----QIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVML----- 257 (587)
Q Consensus 187 ~Lg~fPr~kivhTS~~~~G----QIYiP~vNw~Lmi~~i~v~~~F~~s~~l~~AYGiaV~~~m~iTT~L~~~v~~----- 257 (587)
+-|-.||+-+...=++..| |+|+|.+= +..+-=|---=|-++-.+=-.+++|++..+||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3788999999988888888 99999862 1111111122245555666889999999999998765221
Q ss_pred HHHhhhhHHHHHHHHHHHH-HHHH
Q 007854 258 LIWQTNLLLVLCFPLVFGS-VELL 280 (587)
Q Consensus 258 ~~w~~~~~~~~~~~~~f~~-ie~~ 280 (587)
++.-.-+.+...|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 2344455666777777765 4443
No 37
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=38.22 E-value=4.4e+02 Score=29.05 Aligned_cols=29 Identities=21% Similarity=0.130 Sum_probs=17.1
Q ss_pred cchhhhcchhhh--hhccCCCccccceehhh
Q 007854 90 GCVLCITGAEAM--FADLGHFSVKAIQIAFT 118 (587)
Q Consensus 90 ~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 118 (587)
.++.+.+|-|+. .|+==+-.+|.|-.|-.
T Consensus 205 ~~~~af~G~e~~~~~a~E~knP~r~iPrai~ 235 (478)
T TIGR00913 205 TAAFSFGGTELVALTAGEAANPRKSIPRAAK 235 (478)
T ss_pred HHHhhhccHHHHHHHHHhhcChhhHHHHHHH
Confidence 345677888853 44544555666655543
No 38
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=36.07 E-value=16 Score=38.68 Aligned_cols=30 Identities=20% Similarity=0.389 Sum_probs=23.5
Q ss_pred CCCccccceehhhhhHhHHHHHHhccch-----hhhccCCCccc
Q 007854 106 GHFSVKAIQIAFTLVVFPCLLLAYMGQA-----AYLMKYPDSAN 144 (587)
Q Consensus 106 GHF~~~~I~~aw~~~v~P~Lll~Y~GQ~-----A~l~~~p~~~~ 144 (587)
+++||.+|||+|-. ..||+ .=||+|||-+.
T Consensus 173 ~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~ 207 (286)
T KOG4742|consen 173 SYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVA 207 (286)
T ss_pred cccccCcccccccc---------cccHhHhhcCchhhcCcchhc
Confidence 68999999999988 34544 34788999766
No 39
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=31.68 E-value=56 Score=36.08 Aligned_cols=36 Identities=28% Similarity=0.242 Sum_probs=22.0
Q ss_pred hhhhcccchhhhcchh--hhhhccCCCccccceehhhh
Q 007854 84 AWSALGGCVLCITGAE--AMFADLGHFSVKAIQIAFTL 119 (587)
Q Consensus 84 g~~~LG~v~L~iTG~E--AlyADlGHF~~~~I~~aw~~ 119 (587)
=|..+.-.+.+.+|-| +.+|+==.=.+|+|..|-..
T Consensus 202 ~~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~~ 239 (478)
T PF00324_consen 202 FFAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATLL 239 (478)
T ss_pred HHHhhhhhhcccccccccccccccCCCchhhhhhHhhh
Confidence 3556666778888988 34555445556666555443
No 40
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=31.25 E-value=49 Score=25.58 Aligned_cols=30 Identities=30% Similarity=0.421 Sum_probs=16.8
Q ss_pred HHHHHHHHHhhHhHHHHHHHHHhcCCChHH
Q 007854 301 SVFLCVMYIWNYGSVLKYRSEVREKISMDF 330 (587)
Q Consensus 301 ~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~ 330 (587)
.+++.....|.|-+++|.++|...++|+++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~d 48 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLDD 48 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCccC
Confidence 334444455666555566666666676653
No 41
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=29.40 E-value=8.1e+02 Score=27.11 Aligned_cols=107 Identities=13% Similarity=0.053 Sum_probs=48.7
Q ss_pred hcccchhhhcchhhh--hhccCCCccccceehhhhhHhHHHHHHhccchhhhc--cCCCc---ccCcccccc----cCcc
Q 007854 87 ALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLM--KYPDS---ANRIFYDSV----PDSL 155 (587)
Q Consensus 87 ~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~v~P~Lll~Y~GQ~A~l~--~~p~~---~~npFf~~~----P~~~ 155 (587)
.+..++.+.+|-|+. .|.==+-.+|.|..|-.. ..-...+.|.-....+. ..+++ .++||-... -++.
T Consensus 216 ~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 294 (469)
T PRK11049 216 GFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAA 294 (469)
T ss_pred HHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhH
Confidence 444456777788864 333335556666666532 22233444444333222 12222 235543221 1122
Q ss_pred hHHHHHHHHHHHHHhhhhhhcchhhHHHHHHHhCCCCce
Q 007854 156 FWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 194 (587)
Q Consensus 156 ~~P~~vlAtlAtIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 194 (587)
..-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 295 ~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 295 ASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 222222333333333444444444455555578999964
No 42
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=26.58 E-value=8.7e+02 Score=26.54 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHhhccccccccccchhh---HHHHHHHHHHHhhhhhhcccCcce----eeecChHHHHHHHHhcCcch-h
Q 007854 14 IVSIIILVALFSIQRFGTGKVGFMFAP---VLALWFFSLGSIGLYNLVKYDISV----VRAFNPIYIYLFFKKNGKDA-W 85 (587)
Q Consensus 14 ~is~~ILv~LF~~Q~~GT~kvg~~F~P---Im~~Wf~~i~~~Gi~ni~~~~p~V----l~A~nP~y~~~f~~~~~~~g-~ 85 (587)
.+++++++++..+.-+|+...+.+--. +.++-++.+.++|+..+...+|.. +.-+.+.-. +..+|..+ +
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~ 204 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFGFAPGSEVSGFSNLTGKGG---FFPNGIGAVL 204 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccccCCCC---cCcccHHHHH
Confidence 456666666777888888776654332 223333333444554333222321 111110000 00112111 2
Q ss_pred hhcccchhhhcchhhh--hhccCCCccccceehh
Q 007854 86 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAF 117 (587)
Q Consensus 86 ~~LG~v~L~iTG~EAl--yADlGHF~~~~I~~aw 117 (587)
..+...+.+.+|-|+. .|+-=+--+|.|..|-
T Consensus 205 ~a~~~~~~af~G~e~~~~~a~E~k~P~r~iPrAi 238 (452)
T TIGR01773 205 LAILVTMFSFMGTEIVTIAAAESSNPIKSITRAT 238 (452)
T ss_pred HHHHHHHHHhccHHHHhHHHHhhcChhhHHHHHH
Confidence 2344566777888864 2333333455666664
No 43
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=25.18 E-value=86 Score=28.39 Aligned_cols=28 Identities=18% Similarity=0.320 Sum_probs=22.2
Q ss_pred eEEEEEecCCCCcEEEEEEEEeeccccc
Q 007854 393 RFLFRRVGPKDYHMFRCVTRYGYKDVRK 420 (587)
Q Consensus 393 R~~v~~l~~~~~~~yr~vvryGY~d~~~ 420 (587)
-+.+..+...+.|.|+|.+.+|.-|..+
T Consensus 75 sL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 75 TLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred EEEEeecccccCEEEEEEEecCCCCcee
Confidence 4566677777789999999999887653
No 44
>PRK05151 electron transport complex protein RsxA; Provisional
Probab=24.75 E-value=1.9e+02 Score=29.20 Aligned_cols=47 Identities=19% Similarity=0.277 Sum_probs=32.9
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH
Q 007854 213 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 259 (587)
Q Consensus 213 Nw~Lmi~~i~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~ 259 (587)
|=..+.-.+.++-...-|+++.||. |+||+.||.+++.+..++-..+
T Consensus 15 nN~vl~~~LG~Cp~laVs~~~~~a~gmGlav~fV~~~s~~~~~~i~~~i 63 (193)
T PRK05151 15 NNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASICAWLVNTYI 63 (193)
T ss_pred hhHHHHHHHhcCchhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444455555566677777776 6788999999999988877655
No 45
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=23.70 E-value=17 Score=35.91 Aligned_cols=60 Identities=20% Similarity=0.346 Sum_probs=46.7
Q ss_pred HHHHHhCCcEE-EeeecEEEecCCCChhHHHHHHHHHHHH---hhhccCCCccccCCCCCeEEeee
Q 007854 522 LREAIDSGFTY-LLAHGDVRAKKKSFFLKKLVINYFYAFL---RRNCRAGAANMSVPHMNILQVGM 583 (587)
Q Consensus 522 L~~A~eaGVvY-IlG~s~vkar~~Ss~lKK~vIn~~Y~FL---RkNcR~~~~~L~IPh~~LlEVGm 583 (587)
+++++++|.-- |..+ .+.++=.++.+|+=+|++|.-. +++.|.....+++|.++.+-||-
T Consensus 55 ~~e~k~~gi~v~vvSN--n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 55 LAELKEAGIKVVVVSN--NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred HHHHHhcCCEEEEEeC--CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 46677788754 4444 5666667788889999888774 67888899999999999999985
No 46
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=23.70 E-value=1.2e+02 Score=30.29 Aligned_cols=62 Identities=21% Similarity=0.283 Sum_probs=40.2
Q ss_pred ehhhhhHhHHHHHHhccchhhhccCCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhcchhhHHHHHH
Q 007854 115 IAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAM 186 (587)
Q Consensus 115 ~aw~~~v~P~Lll~Y~GQ~A~l~~~p~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qa~ 186 (587)
+|=+.+=+|||+++|+= +.=+.||.+..| -.+-.--++.|+..=++-||+ +|.+|+.+..-+
T Consensus 88 iAs~llP~PsLVIaYCl--~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 88 IASLLLPFPSLVIAYCL--SMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHHHcCccHHHHHHHH--HheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 34455568999999972 232668887666 344455556666666667888 777777666544
No 47
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=22.14 E-value=2.6e+02 Score=28.35 Aligned_cols=47 Identities=11% Similarity=0.287 Sum_probs=32.2
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH
Q 007854 213 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI 259 (587)
Q Consensus 213 Nw~Lmi~~i~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~ 259 (587)
|=..+.-.+.++-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 14 ~N~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 14 ENMALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred hhHHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444455555566677777776 6788999999999888877654
No 48
>PF02508 Rnf-Nqr: Rnf-Nqr subunit, membrane protein; InterPro: IPR003667 The rnf genes of Rhodobacter capsulatus, essential for nitrogen fixation, are thought to encode a system for electron transport to nitrogenase. The rnfABCDGEH operon comprises seven genes that show similarities in gene arrangement and deduced protein sequences to homologous regions in the genomes of Haemophilus influenzae and Escherichia coli. Four of the rnf gene products were found to be similar in sequence to components of an Na+-dependent NADH:ubiquinone oxidoreductase (NQR) from Vibrio alginolyticus []. The NQR-type enzyme of Klebsiella pneumoniae was shown to catalyse sodium-dependent NADH oxidation in the respiratory chain [].; GO: 0016020 membrane
Probab=21.85 E-value=3.1e+02 Score=27.41 Aligned_cols=87 Identities=23% Similarity=0.300 Sum_probs=47.3
Q ss_pred HHHHHHHhheeeEEeCCchhHHhhh--hchhhhHHHHHHHHHHHHHHHH---Hhh--hhHHHHHHHHHHHHHHHHHH--H
Q 007854 213 NWFLMIMCVVVVSIFQSTTDIANAY--GIAEVGVMLVSSTLVTIVMLLI---WQT--NLLLVLCFPLVFGSVELLYM--S 283 (587)
Q Consensus 213 Nw~Lmi~~i~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~L~~~v~~~~---w~~--~~~~~~~~~~~f~~ie~~f~--s 283 (587)
|=..+.-.+.++-...-|+++.||- |+||+.+|++++.+..++-.++ .+. .+...+....+.-.+|...- +
T Consensus 15 ~N~vl~~~LGlcp~l~vs~~~~~a~~mGlav~~V~~~s~~~~~~l~~~il~p~~~lr~~~~ilviA~~v~~v~~~l~~~~ 94 (190)
T PF02508_consen 15 NNPVLVQFLGLCPFLAVSTSLENALGMGLAVTFVLTLSSVLISLLRNFILAPPSYLRIIVFILVIASLVQLVEMVLRAYF 94 (190)
T ss_pred hHHHHHHHHHhcchhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3334444455555555566666654 6788899999999998887766 332 22222222223333443321 1
Q ss_pred HhHhcccCCccHHHHHH
Q 007854 284 AVLSKIAEGGWLPLAFA 300 (587)
Q Consensus 284 a~l~Kv~~GGW~pl~ia 300 (587)
=.++|- =|-|+||...
T Consensus 95 p~l~~~-LgiylpLi~~ 110 (190)
T PF02508_consen 95 PSLYKA-LGIYLPLITV 110 (190)
T ss_pred HHHHHH-HHHhhhHHHH
Confidence 122222 3777887764
No 49
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=21.54 E-value=1.1e+03 Score=26.02 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=17.8
Q ss_pred ehhHHHHHHHHHHhhcccccccccc
Q 007854 12 LVIVSIIILVALFSIQRFGTGKVGF 36 (587)
Q Consensus 12 vv~is~~ILv~LF~~Q~~GT~kvg~ 36 (587)
...++.++++++..+.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 4556667777788888889766554
No 50
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=20.81 E-value=3.6e+02 Score=30.71 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=13.8
Q ss_pred hhhhchhhhHHHHHHHHHH
Q 007854 235 NAYGIAEVGVMLVSSTLVT 253 (587)
Q Consensus 235 ~AYGiaV~~~m~iTT~L~~ 253 (587)
+.||+.+...+++..++..
T Consensus 24 ~~YGl~ialGil~a~~l~~ 42 (460)
T PRK13108 24 RAYAVCVITGIIVALLIGD 42 (460)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6899888888877655543
No 51
>PF02660 G3P_acyltransf: Glycerol-3-phosphate acyltransferase; InterPro: IPR003811 This entry describes glycerol-3-phosphate acyltransferase. It catalyses the transfer of an acyl group from acyl-phosphate (acyl-PO4) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilises acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. ; GO: 0005886 plasma membrane
Probab=20.40 E-value=8.2e+02 Score=23.97 Aligned_cols=83 Identities=16% Similarity=0.183 Sum_probs=46.3
Q ss_pred EEeCCchhHHhhhhchhhhHHHHHH--HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhHhcccCCccHHHHHHHH
Q 007854 225 SIFQSTTDIANAYGIAEVGVMLVSS--TLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASV 302 (587)
Q Consensus 225 ~~F~~s~~l~~AYGiaV~~~m~iTT--~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Kv~~GGW~pl~ia~~ 302 (587)
..||--..+|.+.|.-....-..+- +...++...++|....-.+..+.++...- .+ .+.+.+..+..+
T Consensus 91 l~FkGGKGvAt~~G~ll~l~p~~~li~~~~~~~~~~~~r~~s~~s~~~~~~~~~~~-~~---------~~~~~~~~~~~~ 160 (178)
T PF02660_consen 91 LKFKGGKGVATSLGVLLALSPWLALIALAVFLILLLITRYVSLASIIAFIILPILA-WL---------WGYSLAYVLFAI 160 (178)
T ss_pred hCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HH---------HhCCHHHHHHHH
Confidence 4689999999999875544433322 22333333344433222222222211111 11 677777777777
Q ss_pred HHHHHHHhhHhHHHH
Q 007854 303 FLCVMYIWNYGSVLK 317 (587)
Q Consensus 303 ~~~iM~~W~~G~~~~ 317 (587)
+..++..|++-+..+
T Consensus 161 ~l~~li~~~h~~Ni~ 175 (178)
T PF02660_consen 161 ILALLIIYRHRENIK 175 (178)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888776655
Done!