Your job contains 1 sequence.
>007855
MDLLQNYADEKEDELDKPENQNDQNPDSAALESSPPHILPSKSAAPQVDDTTLALTVAQA
RQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSF
VFDEQYNTFYKYGYAADPAGSNYIGDLDALEKNNAISVYNIRQNEQKKRKLERKQEAEGG
DGMAVDVDPAEVNNPATDSWLMKNRKSPWAGKKEGVQTELTEEQKKYAEEYAKKKEDKGN
AGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVS
AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASY
DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ
EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN
TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC
WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007855
(587 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 2424 1.0e-251 1
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 1298 1.4e-146 2
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 1205 1.6e-143 2
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 1354 2.4e-138 1
UNIPROTKB|O60508 - symbol:CDC40 "Pre-mRNA-processing fact... 1334 3.2e-136 1
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 1137 4.0e-136 2
UNIPROTKB|F1RSY9 - symbol:CDC40 "Uncharacterized protein"... 1332 5.2e-136 1
MGI|MGI:1918963 - symbol:Cdc40 "cell division cycle 40" s... 1329 1.1e-135 1
UNIPROTKB|F1MBS9 - symbol:CDC40 "Uncharacterized protein"... 1327 1.8e-135 1
UNIPROTKB|E2RSW2 - symbol:CDC40 "Uncharacterized protein"... 1327 1.8e-135 1
UNIPROTKB|F1LMQ0 - symbol:Cdc40 "Protein Cdc40" species:1... 1206 3.8e-127 2
RGD|1307063 - symbol:Cdc40 "cell division cycle 40" speci... 1206 1.3e-126 2
WB|WBGene00018625 - symbol:prp-17 species:6239 "Caenorhab... 1078 4.3e-109 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 922 7.6e-99 2
UNIPROTKB|G4MYQ9 - symbol:MGG_08133 "Pre-mRNA-processing ... 926 1.2e-98 2
ASPGD|ASPL0000032184 - symbol:AN5196 species:162425 "Emer... 854 8.7e-98 2
GENEDB_PFALCIPARUM|PFL0970w - symbol:PFL0970w "pre-mRNA s... 853 1.4e-93 2
UNIPROTKB|Q8I5L1 - symbol:PFL0970w "Pre-mRNA splicing fac... 853 1.4e-93 2
CGD|CAL0001327 - symbol:orf19.6347 species:5476 "Candida ... 688 6.7e-73 2
SGD|S000002772 - symbol:CDC40 "Pre-mRNA splicing factor" ... 710 4.3e-70 1
TAIR|locus:2172084 - symbol:AT5G54520 "AT5G54520" species... 495 2.6e-47 1
MGI|MGI:3045255 - symbol:Wdr25 "WD repeat domain 25" spec... 421 1.8e-39 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 347 2.8e-33 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 345 3.0e-33 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 345 3.0e-33 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 345 3.0e-33 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 360 1.1e-32 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 341 1.4e-32 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 341 1.5e-30 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 335 7.1e-30 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 333 1.2e-29 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 341 9.0e-29 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 319 4.3e-28 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 319 4.3e-28 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 309 5.5e-27 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 306 1.2e-26 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 306 1.2e-26 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 305 1.5e-26 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 304 1.9e-26 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 302 3.2e-26 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 302 3.2e-26 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 301 4.2e-26 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 300 5.4e-26 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 296 1.5e-25 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 296 1.5e-25 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 320 6.7e-25 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 289 8.7e-25 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 287 1.4e-24 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 286 1.8e-24 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 282 5.0e-24 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 281 6.5e-24 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 281 6.5e-24 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 289 1.3e-23 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 275 2.9e-23 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 275 2.9e-23 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 286 3.5e-23 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 283 8.6e-23 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 281 1.6e-22 1
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 285 2.3e-22 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 261 9.9e-22 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 260 7.9e-20 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 259 8.5e-20 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 261 2.2e-19 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 242 2.3e-19 1
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 257 3.5e-19 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 254 7.5e-19 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 246 1.1e-18 1
DICTYBASE|DDB_G0275323 - symbol:tipD "autophagy protein 1... 262 1.1e-18 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 248 2.0e-18 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 250 2.2e-18 1
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 176 2.4e-18 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 247 2.6e-18 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 258 3.2e-18 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 246 4.9e-18 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 240 5.5e-18 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 244 5.8e-18 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 246 5.9e-18 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 246 6.0e-18 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 226 6.2e-18 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 172 6.4e-18 2
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 213 7.0e-18 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 244 7.3e-18 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 244 1.0e-17 1
FB|FBgn0030365 - symbol:Tango4 "Transport and Golgi organ... 244 1.1e-17 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 248 1.3e-17 1
WB|WBGene00006481 - symbol:plrg-1 species:6239 "Caenorhab... 243 1.5e-17 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 240 1.6e-17 1
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 243 1.6e-17 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 247 1.7e-17 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 242 1.8e-17 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 239 2.2e-17 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 240 2.9e-17 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 233 3.2e-17 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 241 5.4e-17 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 239 6.2e-17 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 237 6.7e-17 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 233 1.0e-16 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 233 1.0e-16 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 233 1.0e-16 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 233 1.0e-16 1
WARNING: Descriptions of 1300 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 2424 (858.3 bits), Expect = 1.0e-251, P = 1.0e-251
Identities = 447/587 (76%), Positives = 489/587 (83%)
Query: 1 MDLLQNYADEKEDELDKPENQNDQNPDSAALESSPPHILPSKSAAPQVDDTTLALTVAQA 60
MDL+Q+Y +E E PE SSPP +L +KS+AP+VDDT LALTVA
Sbjct: 1 MDLIQSYEEEDEAVASSPE-------------SSPPRMLKAKSSAPEVDDTALALTVANV 47
Query: 61 RQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSF 120
Q++S+PIDP+QHVV YNPT++QLWAP++GPAHPYAKDGIAQGMRNHKLG VEDASI SF
Sbjct: 48 NQSKSKPIDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSF 107
Query: 121 VFDEQYNTFYKYGYAADPAGSNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGG 180
F+EQY+TF+K GYAADP+G NY+GD++A +KN+ +SV+NI G
Sbjct: 108 GFEEQYHTFHKCGYAADPSGMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREG 167
Query: 181 DGMAVDVDPAEVNNPATDSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDKGN 240
+ +++P E NP T++WL KNRKSPW+ KKE VQ ELT +KG
Sbjct: 168 EEKKEEIEP-EAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQ 226
Query: 241 AGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVS 300
G KGEH DKSTFHGKEEKDYQGRSW+ PKDAKA NDHCYIPKRLVHTWSGHTKGVS
Sbjct: 227 QGETKGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVS 286
Query: 301 AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASY 360
AIRFFPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH+KAVRDI F NDG+KFLTA Y
Sbjct: 287 AIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGY 346
Query: 361 DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
DKNIKYWDTETGQVI TFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+NT E+TQ
Sbjct: 347 DKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQ 406
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN 480
EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS+HPN
Sbjct: 407 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPN 466
Query: 481 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 540
NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC
Sbjct: 467 GNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 526
Query: 541 WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
WFWDWKSCKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 527 WFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 1298 (462.0 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 224/375 (59%), Positives = 281/375 (74%)
Query: 216 VQTELTXXXXXXXXXXXXXXXDKGNAGGE---KGEHVEDKSTFHGKEEKDYQGRSWVAPP 272
++T+LT K GG+ + + S FHGK +KDY GRSWV PP
Sbjct: 221 IETDLTEQQRAFMDSRVKKQKGKDEEGGDIDSTAAALSNTSIFHGKSKKDYMGRSWVDPP 280
Query: 273 KDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC 332
D + ++PK+L+H ++GHTKGV+AIR+ PKYGHL+LSAGMD VKIWD + +C
Sbjct: 281 SDLRLVTPDTFVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRC 340
Query: 333 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPD 392
++TYMGHS+AVRDI F NDG +FL+ YD+ + WDTETG+++ +F+ GKIPY +K NPD
Sbjct: 341 IQTYMGHSQAVRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYCIKFNPD 400
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
DDKQ L G SDKKI+QWD+ + +I QEYDQHLGAVNTITF+D+NRRFVTSSDDKSLRV
Sbjct: 401 DDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRV 460
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W++GIPVVIKYIS+P MHSMP+++LHP W AAQSLDNQILIYS R+RF++NKKKRF G
Sbjct: 461 WDWGIPVVIKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLG 520
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 572
H V+GYACQ+ FSPDG+F+ SGD GK +FWDWK+ K+ +T+ H VCIG EW PLE S
Sbjct: 521 HNVSGYACQLGFSPDGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLEPS 580
Query: 573 KVATCGWDGLIKYWD 587
KVATC W+ IK WD
Sbjct: 581 KVATCSWNNEIKLWD 595
Score = 155 (59.6 bits), Expect = 1.4e-146, Sum P(2) = 1.4e-146
Identities = 49/175 (28%), Positives = 79/175 (45%)
Query: 1 MDLLQNYADEKEDELDKPENQNDQNPDSAAL-------ESSPP-------HILPSKSAAP 46
MDLL Y D E+EL + N + E++P + S
Sbjct: 1 MDLLTAYDDSDEEELTNTNTNTNTNTTTTTTTTTTTTTETTPTINNNNNNNNNNSNKTIT 60
Query: 47 QVDDTTLALTVAQARQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDG--IAQGM 104
+ LA V R +++ I+P+ ++ YNPT E L I+GP P++ + +
Sbjct: 61 SFKPSNLAPIVTSIRVVENK-INPNDKILLYNPTVESLEGDIFGPKKPFSSNDKKLDPKF 119
Query: 105 RNHKLGFVEDASIDSFVFDEQYNTFYKYGYAADPAGSN-YIG----DLDALEKNN 154
+NH G VED I+ + F++Q +F GY+ +P S +IG + D +KNN
Sbjct: 120 KNHTNGLVEDYHINDYAFNQQVLSFKTNGYSENPNNSTEFIGHRKDENDHTKKNN 174
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 1205 (429.2 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 212/344 (61%), Positives = 266/344 (77%)
Query: 250 EDKSTFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHTWSGHTKGVSAIR 303
E+K+ H KE DYQGRS++ P+D + + CY+PK+ +H WSGHTKGVSA+R
Sbjct: 237 EEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVR 296
Query: 304 FFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKN 363
FP GH++LS MD K+K+W+V+ +C+RT++GH KAVRDI F N GT+FL+A+YD+
Sbjct: 297 LFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRY 356
Query: 364 IKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD 423
IK WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD
Sbjct: 357 IKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYD 416
Query: 424 QHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW 483
+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHSMP+++L PN W
Sbjct: 417 RHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKW 476
Query: 484 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 543
LA QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V+SGD +GK W
Sbjct: 477 LACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIW 536
Query: 544 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
DWK+ K++ +K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 537 DWKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 580
Score = 219 (82.2 bits), Expect = 1.6e-143, Sum P(2) = 1.6e-143
Identities = 64/209 (30%), Positives = 96/209 (45%)
Query: 4 LQNYADEKEDELDKPENQNDQNPDSAALESSPP---HILPSKSAAPQVD-DTTLALTVAQ 59
L +Y + +PE D P A + +S H+ P +A P + D + V +
Sbjct: 8 LASYGGSDSESDSEPEA--DAGPQRAVVLASRDAVLHLRPPPAAPPALPVDAAPEVAVKE 65
Query: 60 ARQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDS 119
+T +DP+ V YNPTYE ++AP +GP +P+ +A RN G+ E A I+
Sbjct: 66 DVETGVH-LDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHIND 123
Query: 120 FVFDEQYNTFYKYGYAADPAGSN------YIGDLDALEKNNAISVYNIXXXXXXXXXXXX 173
F+F++Q TF YGYA DP+ N YIG ++ EKN ++V+
Sbjct: 124 FMFEQQRRTFVTYGYALDPSIDNPEVATKYIGSVEEAEKNQGLTVFETGQKKIEKRKKFK 183
Query: 174 XXXAEGGDGM----AVDVDPAEVNNPATD 198
A DG A VD EV P+ +
Sbjct: 184 ENDASNIDGFLGPWAKYVDEKEVAKPSEE 212
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
Identities = 277/592 (46%), Positives = 370/592 (62%)
Query: 10 EKEDELDKPENQNDQNPDSAALESSPPHILPSKSAA-PQVDDTTLALTVAQARQTQSRP- 67
+ E+E + P N + +PD+ H+ P KS V A VA ++
Sbjct: 16 DSENESESPNNPQEIDPDALV------HLKPLKSGGVTTVAVLNSAPEVAVKEDVETGVH 69
Query: 68 IDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYN 127
+DP+ V+YNPTYE ++AP +GP +P+ +A RN G+ E A ++ F+F++Q
Sbjct: 70 LDPALKEVSYNPTYETMFAPEFGPMNPFRSQQMA-APRNMLSGYAEPAHVNDFMFEQQRR 128
Query: 128 TFYKYGYAADP------AGSNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGGD 181
TF +GYA DP A SN + A+E+ A + +GG+
Sbjct: 129 TFSTFGYALDPSVDTSQASSNSY--IGAIEE--AEKNKGLTVFETGPKKSEKRKKVKGGE 184
Query: 182 GMAVDVDPAEVNNPATDSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDKGNA 241
A D+D P W + A E Q EL +G
Sbjct: 185 --AADID--NFLGP----WAKYQDEKDVAKPSEDEQKELDEITAKRQK--------RGK- 227
Query: 242 GGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDA----KAAN--DHCYIPKRLVHTWSGH 295
E+ E+K+ H K+ DYQGRS++ P+D ++A+ D CY+PK+ +H W+GH
Sbjct: 228 -NEEESPAEEKTVLHIKDAYDYQGRSYLHIPQDVGINLRSADIPDKCYLPKKQLHVWTGH 286
Query: 296 TKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKF 355
TKGVSAIR FPK GHL+LS MD K+K+W+V+N +C+RT++GHSKAVRD+ F N GT+F
Sbjct: 287 TKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQF 346
Query: 356 LTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 415
L+A+YD+ IK WD+ETGQ I F+ K+PY VK NPD+DKQN+L+AGMSDKKIVQWD+ +
Sbjct: 347 LSAAYDRYIKLWDSETGQCISRFTNRKVPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRS 406
Query: 416 KEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 475
E+ QEYD+HLGAVNTITFVD NRRFV++SDDKSLRVWE+ IP KYI+EP MHSMP++
Sbjct: 407 GEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYIAEPSMHSMPAV 466
Query: 476 SLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 535
+L PN WLA QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V+SGD
Sbjct: 467 TLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGD 526
Query: 536 GEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+GK WDWK+ K++ +K H+ VCI WHP E SKV TCGWDG IK WD
Sbjct: 527 ADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD 578
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
Identities = 276/596 (46%), Positives = 367/596 (61%)
Query: 3 LLQNYADEKEDELDKPENQNDQNPDSAALESSPPHILPSKSAAPQVD---DTTLALTVAQ 59
L +Y E D ++++ + P AA S H+ S S+ P + D+ + V +
Sbjct: 8 LAASYGSGSGSESDS-DSESSRCPLPAA--DSLMHLTKSPSSKPSLAVAVDSAPEVAVKE 64
Query: 60 ARQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDS 119
+T +DP+ V YNPTYE ++AP +GP +P+ +A RN G+ E A I+
Sbjct: 65 DLETGVH-LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHIND 122
Query: 120 FVFDEQYNTFYKYGYAADPAGSNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEG 179
F+F++Q TF YGYA DP+ LD N+ +S I E
Sbjct: 123 FMFEQQRRTFATYGYALDPS-------LD----NHQVSAKYIGSVEEAEKNQGLTVF-ET 170
Query: 180 GDGMAVDVDPAEVNNPAT-DSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDK 238
G + N+ + D +L PWA K + ++ +
Sbjct: 171 GQKKTEKRKKFKENDASNIDGFL-----GPWA--KYVDEKDVAKPSEEEQKELDEITAKR 223
Query: 239 GNAGGEKGEHV-EDKSTFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHT 291
G ++ E E+K+ H KE DYQGRS++ P+D + + CY+PK+ +H
Sbjct: 224 QKKGKQEEEKPGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHV 283
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
WSGHTKGVSA+R FP GHL+LS MD K+K+W+V+ +C+RT++GHSKAVRDI F
Sbjct: 284 WSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTA 343
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQW
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQW 403
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHS
Sbjct: 404 DIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHS 463
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
MP+++L PN WLA QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V
Sbjct: 464 MPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYV 523
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+SGDG GK WDWK+ K++ K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 524 ISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 1137 (405.3 bits), Expect = 4.0e-136, Sum P(2) = 4.0e-136
Identities = 192/345 (55%), Positives = 267/345 (77%)
Query: 249 VEDKSTFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHTWSGHTKGVSAI 302
+E+KST H K+ DYQGRS++ P D + A C++PK +HTWSGH KG+S+I
Sbjct: 232 LEEKSTLHIKDAYDYQGRSYLHAPHDLGVNLRSNAPPTKCFLPKAHIHTWSGHNKGISSI 291
Query: 303 RFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDK 362
R+FPK HL+LS MD +VK+W+V+ +C+RT+ GH +A++DI++ N GT FL+ASYD+
Sbjct: 292 RWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKDIAWNNRGTNFLSASYDR 351
Query: 363 NIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY 422
IK WD ETG V+ F+T K+P+ VK +PD+ KQ++ +AG SDKKI+ WD + +I QEY
Sbjct: 352 YIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWDTRSGDIVQEY 411
Query: 423 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN 482
D+HLG+V+TITFVD+NRRFVT+SDDKS+R+WE+ IPV +KYI++P MHSMP+++L PN
Sbjct: 412 DRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMKYIADPTMHSMPAVTLAPNGK 471
Query: 483 WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 542
W+A QSLDN+I+I+S RF++N+KK F GH+V+GYACQ++FSPD +++SGDG+GKC+
Sbjct: 472 WMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLDFSPDMSYLVSGDGDGKCYI 531
Query: 543 WDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
WDWK+ K+++ + H+GVCI WHP E SKV T GWDG IKYWD
Sbjct: 532 WDWKTTKMYKKWQAHDGVCISALWHPHEASKVVTAGWDGQIKYWD 576
Score = 217 (81.4 bits), Expect = 4.0e-136, Sum P(2) = 4.0e-136
Identities = 56/168 (33%), Positives = 84/168 (50%)
Query: 4 LQNYA---DEKEDELDKPENQNDQNPDSAALESSPPHILP---SKSAAPQVDDTTLALTV 57
LQ+YA DE+ D D + P SA + P H+LP + S + + V
Sbjct: 4 LQSYASSSDEESDHADAATATTNSEP-SAPI---PDHLLPVDKTHSLSKSIAVCAAPTVV 59
Query: 58 AQARQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASI 117
R +DP+ V YNP YE+++AP+ GP HP + RN G+VE A I
Sbjct: 60 PLGASAVPRTLDPTLKEVTYNPRYEEMYAPVKGPEHPDLTMQ-QRAPRNTLAGYVEKAHI 118
Query: 118 DSFVFDEQYNTFYKYGYAADPA------GSNYIGDLDALEKNNAISVY 159
++F F+ Q TF+ YGYA DP+ G +++GDL + +N +V+
Sbjct: 119 NAFEFENQRRTFHTYGYALDPSVDDQADGQSFVGDLQSAYDDNGKTVF 166
Score = 42 (19.8 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 193 NNPATDSWLMKNRKSPWAGKKEGVQT 218
N P T +L K W+G +G+ +
Sbjct: 265 NAPPTKCFLPKAHIHTWSGHNKGISS 290
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 271/581 (46%), Positives = 359/581 (61%)
Query: 19 ENQNDQNPDSAALESSPP--HILPSKSAAPQVD---DTTLALTVAQARQTQSRPIDPSQH 73
E+ +D +L ++ H+ S SA P + D+ + V + +T +DP+
Sbjct: 19 ESDSDSEGGRCSLPAADSLMHLTKSPSAKPSLAVAVDSAPEVAVKEDLETGVH-LDPAVK 77
Query: 74 VVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTFYKYG 133
V YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q TF YG
Sbjct: 78 EVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYG 136
Query: 134 YAADPAGSNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGGDGMAVDVDPAEVN 193
YA DP+ LD N+ +S I G + E +
Sbjct: 137 YALDPS-------LD----NHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKKFKEND 185
Query: 194 NPATDSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDKGNAGGEKGEHV-EDK 252
D +L PWA K + ++ + G ++ E E+K
Sbjct: 186 ASNIDGFL-----GPWA--KYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEK 238
Query: 253 STFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHTWSGHTKGVSAIRFFP 306
+ H KE DYQGRS++ P+D + + CY+PK+ +H WSGHTKGVSA+R FP
Sbjct: 239 TILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFP 298
Query: 307 KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKY 366
GHL+LS MD K+K+W+V+ +C+RT++GHSKAVRDI F GT+FL+A+YD+ +K
Sbjct: 299 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 358
Query: 367 WDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL 426
WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HL
Sbjct: 359 WDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL 418
Query: 427 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAA 486
GAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHSMP+++L PN WLA
Sbjct: 419 GAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC 478
Query: 487 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V+SGDG GK WDWK
Sbjct: 479 QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWK 538
Query: 547 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ K++ K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 539 TTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 1329 (472.9 bits), Expect = 1.1e-135, P = 1.1e-135
Identities = 276/596 (46%), Positives = 365/596 (61%)
Query: 3 LLQNYADEKEDELDKPENQNDQNPDSAALESSPPHILPSKSAAPQVD---DTTLALTVAQ 59
L +Y E D +++ + P AA S H+ S SA + D+ + V +
Sbjct: 8 LAASYGSGSGSESDS-DSEGSRCPLPAA--DSLMHLTKSPSAKLSLTVAVDSAPEVAVKE 64
Query: 60 ARQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDS 119
+T +DP+ V YNPTYE ++AP +GP +P+ +A RN G+ E A I+
Sbjct: 65 DLETGVH-LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHIND 122
Query: 120 FVFDEQYNTFYKYGYAADPAGSNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEG 179
F+F++Q TF YGYA DP+ LD N+ +S I E
Sbjct: 123 FMFEQQRRTFATYGYALDPS-------LD----NHQVSAKYIGSVEEAEKNQGLTVF-ET 170
Query: 180 GDGMAVDVDPAEVNNPAT-DSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDK 238
G + N+ + D +L PWA K + ++ +
Sbjct: 171 GQKKTEKRKKFKENDASNIDGFL-----GPWA--KYVDEKDVAKPSEEEQKELDEITAKR 223
Query: 239 GNAGGEKGEHV-EDKSTFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHT 291
G ++ E E+K+ H KE DYQGRS++ P+D + + CY+PK+ +H
Sbjct: 224 QKKGKQEEEKPGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHV 283
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
WSGHTKGVSA+R FP GHL+LS MD K+K+W+V+ +C+RT++GHSKAVRDI F
Sbjct: 284 WSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTA 343
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQW
Sbjct: 344 GTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQW 403
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHS
Sbjct: 404 DIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHS 463
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
MP+++L PN WLA QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V
Sbjct: 464 MPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYV 523
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+SGDG GK WDWK+ K++ K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 524 ISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
Identities = 270/581 (46%), Positives = 358/581 (61%)
Query: 19 ENQNDQNPDSAALESSPP--HILPSKSAAPQVD---DTTLALTVAQARQTQSRPIDPSQH 73
E+ +D +L ++ H+ S S P + D+ + V + +T +DP+
Sbjct: 19 ESDSDSEGGRCSLPAADSLMHLTKSSSDKPSLAVAVDSAPEVAVKEDLETGVH-LDPAVK 77
Query: 74 VVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTFYKYG 133
V YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q TF YG
Sbjct: 78 EVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYG 136
Query: 134 YAADPAGSNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGGDGMAVDVDPAEVN 193
YA DP+ LD N+ +S I G + E +
Sbjct: 137 YALDPS-------LD----NHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKKFKEND 185
Query: 194 NPATDSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDKGNAGGEKGEHV-EDK 252
D +L PWA K + ++ + G ++ E E+K
Sbjct: 186 ASNIDGFL-----GPWA--KYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEK 238
Query: 253 STFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHTWSGHTKGVSAIRFFP 306
+ H KE DYQGRS++ P+D + + CY+PK+ +H WSGHTKGVSA+R FP
Sbjct: 239 TILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFP 298
Query: 307 KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKY 366
GHL+LS MD K+K+W+V+ +C+RT++GHSKAVRDI F GT+FL+A+YD+ +K
Sbjct: 299 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 358
Query: 367 WDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL 426
WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HL
Sbjct: 359 WDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL 418
Query: 427 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAA 486
GAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHSMP+++L PN WLA
Sbjct: 419 GAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC 478
Query: 487 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V+SGDG GK WDWK
Sbjct: 479 QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWK 538
Query: 547 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ K++ K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 539 TTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
Identities = 270/581 (46%), Positives = 357/581 (61%)
Query: 19 ENQNDQNPDSAALESSPP--HILPSKSAAPQVD---DTTLALTVAQARQTQSRPIDPSQH 73
E+ +D L ++ H+ S S P + D+ + V + +T +DP+
Sbjct: 103 ESDSDSEGGRCCLPAADSLMHLTKSASTKPSLAVAVDSAPEVAVKEDLETGVH-LDPAVK 161
Query: 74 VVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTFYKYG 133
V YNPTYE ++AP +GP +P+ +A RN G+ E A I+ F+F++Q TF YG
Sbjct: 162 EVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYG 220
Query: 134 YAADPAGSNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGGDGMAVDVDPAEVN 193
YA DP+ LD N+ +S I G + E +
Sbjct: 221 YALDPS-------LD----NHQVSTKYIGSVEEAEKNQGLTVFETGQKKIEKRKKFKEND 269
Query: 194 NPATDSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDKGNAGGEKGEHV-EDK 252
D +L PWA K + ++ + G ++ E E+K
Sbjct: 270 ASNIDGFL-----GPWA--KYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEK 322
Query: 253 STFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHTWSGHTKGVSAIRFFP 306
+ H KE DYQGRS++ P+D + + CY+PK+ +H WSGHTKGVSA+R FP
Sbjct: 323 TILHVKEMYDYQGRSYLHIPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFP 382
Query: 307 KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKY 366
GHL+LS MD K+K+W+V+ +C+RT++GHSKAVRDI F GT+FL+A+YD+ +K
Sbjct: 383 LSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 442
Query: 367 WDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL 426
WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ + EI QEYD+HL
Sbjct: 443 WDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL 502
Query: 427 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAA 486
GAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHSMP+++L PN WLA
Sbjct: 503 GAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC 562
Query: 487 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V+SGDG GK WDWK
Sbjct: 563 QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWK 622
Query: 547 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ K++ K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 623 TTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 663
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 1206 (429.6 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
Identities = 217/356 (60%), Positives = 269/356 (75%)
Query: 238 KGNAGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHT 291
KG EK E+K+ H KE DYQGRS++ P+D + + CY+PK+ +H
Sbjct: 94 KGKQEEEKPG--EEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHV 151
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
WSGHTKGVSA+R FP GHL+LS MD K+K+W+V+ +C+RT++GHSKAVRDI F
Sbjct: 152 WSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTA 211
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQW
Sbjct: 212 GTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQW 271
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHS
Sbjct: 272 DIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHS 331
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
MP+++L PN WLA QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V
Sbjct: 332 MPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYV 391
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+SGDG GK WDWK+ K++ K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 392 ISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 447
Score = 63 (27.2 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 130 YKYGYAADPAGSN------YIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGGDGM 183
+ +GYA DP+ N YIG ++ EKN ++V+ A DG
Sbjct: 1 FAFGYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGF 60
Query: 184 ----AVDVDPAEVNNPATD 198
A VD +V P+ +
Sbjct: 61 LGPWAKYVDEKDVAKPSEE 79
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 1206 (429.6 bits), Expect = 1.3e-126, Sum P(2) = 1.3e-126
Identities = 217/356 (60%), Positives = 269/356 (75%)
Query: 238 KGNAGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKD------AKAANDHCYIPKRLVHT 291
KG EK E+K+ H KE DYQGRS++ P+D + + CY+PK+ +H
Sbjct: 91 KGKQEEEKPG--EEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHV 148
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
WSGHTKGVSA+R FP GHL+LS MD K+K+W+V+ +C+RT++GHSKAVRDI F
Sbjct: 149 WSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTA 208
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
GT+FL+A+YD+ +K WDTETGQ I F+ K+PY VK NPD+DKQN+ +AGMSDKKIVQW
Sbjct: 209 GTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQW 268
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ + EI QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV KYI+EP MHS
Sbjct: 269 DIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHS 328
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
MP+++L PN WLA QS+DNQILI+ + RF+LNKKK F GH+VAGYACQV+FSPD +V
Sbjct: 329 MPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYV 388
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+SGDG GK WDWK+ K++ K H+ VCIG WHP E SKV TCGWDGLIK WD
Sbjct: 389 ISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 444
Score = 58 (25.5 bits), Expect = 1.3e-126, Sum P(2) = 1.3e-126
Identities = 21/76 (27%), Positives = 30/76 (39%)
Query: 133 GYAADPAGSN------YIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGGDGM--- 183
GYA DP+ N YIG ++ EKN ++V+ A DG
Sbjct: 1 GYALDPSLDNHQVSAKYIGSVEDAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGP 60
Query: 184 -AVDVDPAEVNNPATD 198
A VD +V P+ +
Sbjct: 61 WAKYVDEKDVAKPSEE 76
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 219/584 (37%), Positives = 333/584 (57%)
Query: 16 DKPENQNDQNPDSAALESSPPHILPSKSAAPQVDDTTLALTVAQARQTQSRPIDPSQHVV 75
D + +D + D A S + + AP V+ + VA +DP +
Sbjct: 11 DSEHSDDDASMDQVAKGKSSTLLERAIVTAPDVESKSAIRQVAI--------VDPKTKEI 62
Query: 76 AYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTFYKYGYA 135
NP ++QL+ P GP + + K + +N GFVE A ++ F F+ Q +F GYA
Sbjct: 63 KSNPKFDQLFKPESGPVNHF-KSEQQRSQKNTLTGFVEPAHLNEFHFNRQIRSFDTLGYA 121
Query: 136 ADPAG----SNYIGDLDALEKNNAISVYNIXXXXXXXXXXXXXXXAEGGDGMAVDVDPAE 191
+P ++++GD+ E +S++ E + D D A+
Sbjct: 122 QNPTAESGTTHFVGDVKKAEAEKGVSLFE-----------SKKTGGEKRKRVRND-DSAD 169
Query: 192 VNNPATDSWLMKNRKSPWAGKKEGVQTELTXXXXXXXXXXXXXXXDKGNAGGEKGEHV-E 250
++ T W + A +Q ++ +K E E + E
Sbjct: 170 IDG-YTGPWSRFIDEKTVAKPTPELQKQMDEIVKKRQEKSRRFKKEK-----EDSEQMAE 223
Query: 251 DKSTFHGKEEKDYQGRSWVAPPK--DAKAANDH----CYIPKRLVHTWSGHTKGVSAIRF 304
+ ST H KE +DYQGRS++ PP D+ C++PK+LVHT+ GH KGV+ +++
Sbjct: 224 ESSTLHLKEAEDYQGRSFLVPPSFTGVNLREDYVPERCFVPKKLVHTYRGHNKGVNFLQW 283
Query: 305 FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNI 364
FPK HL LS MDTK+K+W+V++ + +RTY GH VR+++F N+GT+FL+AS+D+ +
Sbjct: 284 FPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYV 343
Query: 365 KYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ 424
K WDTETGQV + F TG +PY +K +PDDDK ++ L GM +KKI+QWD + EI QEYD+
Sbjct: 344 KLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDR 403
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
HL AVN+ITF D NRRF ++SDDKS+R+WE+ IPV K I +H++P+++ PN W+
Sbjct: 404 HLQAVNSITFFDKNRRFASTSDDKSVRIWEWEIPVDTKLIQNVGLHAIPTMTKSPNDKWV 463
Query: 485 AAQSLDNQILIYS-TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 543
Q +DN+I+++ ++ + +KKK F GH AGYAC ++FSPD F++SGD +GK + W
Sbjct: 464 VGQCMDNRIVLFQLVDDKLRFSKKKAFRGHNAAGYACNIDFSPDQSFLISGDADGKLFIW 523
Query: 544 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
DW++ K+ K H+ CI WHP E+S++ T GWDGLIK W+
Sbjct: 524 DWRTHKIVGKWKAHDSTCIAALWHPHEKSRMITAGWDGLIKMWN 567
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 922 (329.6 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
Identities = 165/345 (47%), Positives = 229/345 (66%)
Query: 250 EDKSTFHGKEEKDYQGRSWVAPPKDA------KAANDHCYIPKRLVHTWSGHTKGVSAIR 303
++++ H DYQ RS++ P D + CYIPK+ + TW GHTKG+S +R
Sbjct: 214 KEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKGHTKGISCLR 273
Query: 304 FFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKN 363
FFP GHL+LS MD ++KIW+V++ +RT+ GH++ +RD+SF DG FL+ S+DK
Sbjct: 274 FFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKT 333
Query: 364 IKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD 423
IK WDTE G+ + F++ ++ VK D DK N LAG +DK+I+Q+D+ + +I Q YD
Sbjct: 334 IKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQAYD 393
Query: 424 QHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW 483
HLG +N+ITF++N +RFVT+SDD S+R WE+G PV IK++++ MHSMP ++L PN
Sbjct: 394 HHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPRVALRPNGKS 453
Query: 484 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 543
+A QSLDN I +YS E+++ NKKK F G+ +GY+ +V FSPDGRFV SGD G FW
Sbjct: 454 IACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVFSGDSSGNACFW 513
Query: 544 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGLIKYWD 587
DWK+CK+ L H G +HP E SKVAT DG IKYWD
Sbjct: 514 DWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYWD 558
Score = 79 (32.9 bits), Expect = 7.6e-99, Sum P(2) = 7.6e-99
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 16 DKPENQNDQNPDSAALESSPPHILPSKSAAPQVDDTTLALTVAQARQTQSRPIDPSQHVV 75
D E +N Q+P+ L L +++ AP V D + ++ SR +
Sbjct: 9 DSEEQENSQSPNIQPL-------LHTENLAPAVVDNVKDDLIV-SKGGNSREL------- 53
Query: 76 AYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSFVFDEQY--NTFYKYG 133
A N ++ P GPA+P+ ++N G+ E + +FVF+++Y NT YG
Sbjct: 54 ARNVPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQEYYANTHAIYG 112
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 926 (331.0 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 169/346 (48%), Positives = 239/346 (69%)
Query: 250 EDKSTFHGKEEKDYQGRSWVAPPKDA------KAANDHCYIPKRLVHTWSGHTKGVSAIR 303
++ +TFHG E DYQGR+++ P+D + + YIPK++VH W HTK ++++
Sbjct: 198 DETTTFHGSELHDYQGRTYMHVPQDLDIDLRKEPGSTTNYIPKKMVHQWKHHTKAITSLN 257
Query: 304 FFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKN 363
FFP GHL+LS D+ VKIWDV++ + +RTY GHSK++ D +F G KFL+AS+D+
Sbjct: 258 FFPNSGHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSDTTFNTHGDKFLSASFDRM 317
Query: 364 IKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT-KEITQEY 422
+K WDTETG+ I F+TGK P+VV+ NP + + +AGMSD KIVQ+D E QEY
Sbjct: 318 MKLWDTETGKCIAKFTTGKTPHVVRFNPTSELGHEFVAGMSDNKIVQFDTRAGNETVQEY 377
Query: 423 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN 482
D HLG VNTITF D+ RRF+T+SDD++LR WE+G V IKYI+EP++ +M + HP+
Sbjct: 378 DHHLGPVNTITFCDDGRRFMTTSDDRTLRAWEYGFGVPIKYIAEPYLFAMTRAATHPSGK 437
Query: 483 WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 542
++A QS DNQI++YS+ ++F+ N+KK + GH AG A ++ S DG+F+ SGD G F
Sbjct: 438 YVAYQSSDNQIVVYSSNDKFRQNRKKSYRGHNNAGSAIDIDISADGQFLASGDTGGYVAF 497
Query: 543 WDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGWDGLIKYWD 587
WDWKSCK+F ++ +G + C +WHP E SKVAT G G+IK+WD
Sbjct: 498 WDWKSCKMFHKIQVEDGQ-VSCVKWHPQESSKVATGGASGIIKFWD 542
Score = 73 (30.8 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 69 DPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIA----QGMRNHKLGFVEDASIDSFVFDE 124
+P+ +V Y T E L P +GP++P+ D A Q +N GF E+ + F
Sbjct: 24 EPAHELVQY--TGEDLARPKFGPSNPFRDDSSAASASQKRKNVLTGFAEETFVSEHTFRS 81
Query: 125 QYNTFYKYG 133
++ + G
Sbjct: 82 KHRAVERRG 90
Score = 48 (22.0 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 13/63 (20%), Positives = 28/63 (44%)
Query: 5 QNYADEKEDELDKPENQNDQNP-DSAALESSPPHILPSKSAAPQVDDTTLALTVAQARQT 63
+ A ++E E+ + E+ D++ +S A+ +P L + + D T ++
Sbjct: 152 EELASDEEYEIVEVEDDEDEDVVESGAVVQAPAEALARRQQVEDLGDETTTFHGSELHDY 211
Query: 64 QSR 66
Q R
Sbjct: 212 QGR 214
>ASPGD|ASPL0000032184 [details] [associations]
symbol:AN5196 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001305
EnsemblFungi:CADANIAT00003192 OMA:DHHLGPV Uniprot:C8VF70
Length = 531
Score = 854 (305.7 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 155/299 (51%), Positives = 211/299 (70%)
Query: 251 DKSTFHGKEEKDYQGRSWVAPPKDAK------AANDHCYIPKRLVHTWSGHTKGVSAIRF 304
+ + FHG E+ DY GR+++ P+D + Y+PK+LVHTW HTK ++++RF
Sbjct: 231 ETTEFHGSEQYDYLGRTYMHVPQDLDIDLKKPVGSIKNYVPKKLVHTWKSHTKAITSLRF 290
Query: 305 FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNI 364
FP+ GHL+LS+ D K KIWDV++S + +RT+ GHSKA+ D F G FLTASYD+ +
Sbjct: 291 FPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSGHSKAITDTDFHITGKTFLTASYDRQM 350
Query: 365 KYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ 424
K WDTETGQ I FSTGK P+V++ NP+ + + LAGMSDKKIVQ+D T E QEYD
Sbjct: 351 KLWDTETGQCISRFSTGKTPHVIRFNPNPENSHEFLAGMSDKKIVQFDTRTGEQVQEYDH 410
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
HL A+NT+TFVD NRRF+++SDDKSLR WE+GIPV IK+I+EP+M ++ + HPN ++
Sbjct: 411 HLAAINTLTFVDQNRRFISTSDDKSLRAWEYGIPVPIKFIAEPYMFALTRAAAHPNGKYV 470
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK-CWF 542
A QS DNQI++Y ++F+ N+KK F GH AGYA + SPDG+F+ SGD G W+
Sbjct: 471 AFQSGDNQIVVYGATDKFRQNRKKSFRGHNNAGYAIDLTISPDGQFIASGDSAGLFSWY 529
Score = 137 (53.3 bits), Expect = 8.7e-98, Sum P(2) = 8.7e-98
Identities = 39/125 (31%), Positives = 58/125 (46%)
Query: 29 AALESSPPHILPSKSAAPQVDDTTLALTVAQARQTQSRPI--DPSQHVVAYNPTYEQLWA 86
AA +SS PS AA A V Q+ R + + S + YN TY+ L
Sbjct: 7 AAYDSSDDDT-PSVPAA-SAPKVVAAPEVNTEDQSHMRMMLANTSSKALTYNATYDDLSR 64
Query: 87 PIYGPAHPYAKDGIAQGMR--NHKLGFVEDASIDSFVFDEQYNTFYKYGYAADP-AGSNY 143
P GP++P+ G G++ N G+ E A+I F Q+ T+ GY +P A +
Sbjct: 65 PSQGPSNPFKSAGAGNGLKRKNVPTGYAEAAAISESTFTAQHRTYQSLGYTRNPTAPEQF 124
Query: 144 IGDLD 148
+G+LD
Sbjct: 125 VGNLD 129
Score = 74 (31.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 522 VNFSPD-GRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ F P G ++S +GK WD + S ++ RT H ++H + T +
Sbjct: 288 LRFFPQAGHLLLSSAADGKAKIWDVYHSRELLRTFSGHSKAITDTDFH-ITGKTFLTASY 346
Query: 580 DGLIKYWD 587
D +K WD
Sbjct: 347 DRQMKLWD 354
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/39 (25%), Positives = 14/39 (35%)
Query: 549 KVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
K+ T K H + P + + DG K WD
Sbjct: 273 KLVHTWKSHTKAITSLRFFPQAGHLLLSSAADGKAKIWD 311
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 853 (305.3 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 158/362 (43%), Positives = 224/362 (61%)
Query: 238 KGNAGGEKGEHVEDK--STFHGKEEKD-------YQGRSWVAPPKDAKAAN---DHCYIP 285
K N EK DK ST H EE D + +SW P + K + + + P
Sbjct: 259 KNNVIKEKNTLYNDKIISTLHLNEELDDDDNNMGFYNKSWFQLPAEYKERDFMIEENFPP 318
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K+ +HT+ GH GV IRFFPKYG+ +LSA +D +K+W V+ S C+RTY GH K V+D
Sbjct: 319 KKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKGHFKGVKD 378
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ F NDG+ FL+ SYD N+ YWDTE G++ ++ K PY + LNPDD N L G ++
Sbjct: 379 VLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCLCLNPDDT--NTFLVGGAN 436
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
KI D T I EY++HL A+NTIT +NN++ +++SDDK + +WE+G+PVV+KYIS
Sbjct: 437 NKICHIDFRTGNIELEYNEHLQAINTITLCENNKKLISTSDDKKIFIWEYGLPVVVKYIS 496
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 525
+ M S+ S+S+HP+ N+ QS++N I +Y +F+L KK F GH GY+ V+ S
Sbjct: 497 DASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKKTFKGHHNIGYSINVSCS 556
Query: 526 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 585
DG++V+SGD G + W+WK F+ +K H+ VCI C WHP + S +AT WDG IK
Sbjct: 557 NDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCVWHPFKTSMLATASWDGTIKL 616
Query: 586 WD 587
W+
Sbjct: 617 WE 618
Score = 98 (39.6 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 34/145 (23%), Positives = 69/145 (47%)
Query: 2 DLLQNYADEKEDELDKPENQ--NDQNPDSAALESSPPHILPSKSAAPQVDDTTLALTVAQ 59
D + + K D+ + EN+ ND++ ++ L + P + + + AP ++ L + +
Sbjct: 19 DESKEISSNKNDDTEYIENEEKNDKDQNNYDLINIRP--INTLNCAPDINTYDLEI---K 73
Query: 60 ARQTQSRPIDPSQHVVAYNPTYEQLW-APIYGPAHPYAKDGIAQGMRNHKLGFVEDASID 118
+ + + I+ + ++ NP + + P GP+ + + +NH G +E ++
Sbjct: 74 CYKEKFQNIE--KKIMFDNPEFHNILNRPQQGPSINEHYNFLKNENKNHYNGSIETTFVN 131
Query: 119 SFVFDEQYNTFYKYGYAADPAGSNY 143
+FD QYN F G A +PA NY
Sbjct: 132 KNIFDYQYNQFNVTGIAENPALKNY 156
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 853 (305.3 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 158/362 (43%), Positives = 224/362 (61%)
Query: 238 KGNAGGEKGEHVEDK--STFHGKEEKD-------YQGRSWVAPPKDAKAAN---DHCYIP 285
K N EK DK ST H EE D + +SW P + K + + + P
Sbjct: 259 KNNVIKEKNTLYNDKIISTLHLNEELDDDDNNMGFYNKSWFQLPAEYKERDFMIEENFPP 318
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K+ +HT+ GH GV IRFFPKYG+ +LSA +D +K+W V+ S C+RTY GH K V+D
Sbjct: 319 KKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYKGHFKGVKD 378
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ F NDG+ FL+ SYD N+ YWDTE G++ ++ K PY + LNPDD N L G ++
Sbjct: 379 VLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCLCLNPDDT--NTFLVGGAN 436
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
KI D T I EY++HL A+NTIT +NN++ +++SDDK + +WE+G+PVV+KYIS
Sbjct: 437 NKICHIDFRTGNIELEYNEHLQAINTITLCENNKKLISTSDDKKIFIWEYGLPVVVKYIS 496
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 525
+ M S+ S+S+HP+ N+ QS++N I +Y +F+L KK F GH GY+ V+ S
Sbjct: 497 DASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKKTFKGHHNIGYSINVSCS 556
Query: 526 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 585
DG++V+SGD G + W+WK F+ +K H+ VCI C WHP + S +AT WDG IK
Sbjct: 557 NDGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCVWHPFKTSMLATASWDGTIKL 616
Query: 586 WD 587
W+
Sbjct: 617 WE 618
Score = 98 (39.6 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 34/145 (23%), Positives = 69/145 (47%)
Query: 2 DLLQNYADEKEDELDKPENQ--NDQNPDSAALESSPPHILPSKSAAPQVDDTTLALTVAQ 59
D + + K D+ + EN+ ND++ ++ L + P + + + AP ++ L + +
Sbjct: 19 DESKEISSNKNDDTEYIENEEKNDKDQNNYDLINIRP--INTLNCAPDINTYDLEI---K 73
Query: 60 ARQTQSRPIDPSQHVVAYNPTYEQLW-APIYGPAHPYAKDGIAQGMRNHKLGFVEDASID 118
+ + + I+ + ++ NP + + P GP+ + + +NH G +E ++
Sbjct: 74 CYKEKFQNIE--KKIMFDNPEFHNILNRPQQGPSINEHYNFLKNENKNHYNGSIETTFVN 131
Query: 119 SFVFDEQYNTFYKYGYAADPAGSNY 143
+FD QYN F G A +PA NY
Sbjct: 132 KNIFDYQYNQFNVTGIAENPALKNY 156
>CGD|CAL0001327 [details] [associations]
symbol:orf19.6347 species:5476 "Candida albicans" [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0000350 "generation of
catalytic spliceosome for second transesterification step"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] [GO:0000348 "mRNA branch site recognition"
evidence=IEA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0001327 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12816
RefSeq:XP_711565.1 RefSeq:XP_711633.1 ProteinModelPortal:Q59PE6
STRING:Q59PE6 GeneID:3646758 GeneID:3646818 KEGG:cal:CaO19.13703
KEGG:cal:CaO19.6347 Uniprot:Q59PE6
Length = 520
Score = 688 (247.2 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 130/323 (40%), Positives = 201/323 (62%)
Query: 282 CYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS--GK---CMRTY 336
C++PKR++H + GH KG++ +RFFP GHL+LS G D +K+W ++N+ GK +R +
Sbjct: 199 CFVPKRVIHIFPGHKKGINRLRFFPNSGHLLLSCGNDNLIKLWSIYNTFQGKQYQLLRIF 258
Query: 337 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQ 396
GH+ V+DI F G +FL+ YDK I+ WDT+TG++I++ IP V+ NP++
Sbjct: 259 KGHNLPVKDIIFNQSGERFLSCGYDKYIRLWDTKTGEMIKSIKLKSIPNVLLFNPNNKNN 318
Query: 397 NILLAGMSDKKIVQWDMNTKEIT---QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
+ G+S+ I +D N+ + T Q YD H G++N + + ++ F++SSDDK++R+W
Sbjct: 319 TEFIVGLSNFTIEHYDFNSIQYTNPIQIYDHHQGSINDLKSLGLDK-FISSSDDKTVRIW 377
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ I + IK I++P HS+P I +HP N++A QS+DN I + + +F+ KKK F GH
Sbjct: 378 SWQINIPIKVITDPSQHSIPCIKIHPQANYIALQSMDNSIKVIHSYGKFKWYKKKFFTGH 437
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC--------IGC- 564
+AGY +++FSPDG+ +MSGD G +FWDWK+CK+ + LK + + C
Sbjct: 438 QIAGYGIEIDFSPDGKILMSGDCNGFAYFWDWKTCKLIKKLKIIDNTTTTTTKKKPLTCI 497
Query: 565 EWHPLEQSKVATCGWDGLIKYWD 587
HP E SKVA G G I Y D
Sbjct: 498 VAHPQETSKVAIAGNSGEIYYCD 520
Score = 67 (28.6 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 250 EDKSTFHGKEEKDYQGRSWVAPPKD 274
E S F G++E DYQGRS++ PK+
Sbjct: 143 EPSSEFVGEQEFDYQGRSYMTIPKN 167
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 136/358 (37%), Positives = 215/358 (60%)
Query: 240 NAGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDA------KAANDHCYIPKRLVHTWS 293
N E+ E VE+ S F+GK EKDYQGR ++ PP D + + CY+PK+++ +
Sbjct: 101 NLDSEQIE-VEEVSHFYGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYP 159
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH +G +A++F PK GHLILS G D +KIWD ++ +C+R + GH+K ++ + F D
Sbjct: 160 GHPEGTTALKFLPKTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQ 219
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 413
FL++S+D+++K WDTETG+V P V+ P + + I+ G+S+ KI+ +D
Sbjct: 220 SFLSSSFDRSVKIWDTETGKVKTRLHLNSTPADVESRPTNPHEFIV--GLSNSKILHYDD 277
Query: 414 NTKE---ITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
E + Q YD HL ++ + + + +F++SS+DK++R+WE I V IK IS+ H
Sbjct: 278 RVSENQGLVQTYDHHLSSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQH 337
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
SMP +++HP+ N+ AQS+DN+I +S + +++ + KK F GH AGY + FS DGR+
Sbjct: 338 SMPFLNVHPSQNYFCAQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRY 397
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDGLIKYWD 587
+ SGD + + + WDW + ++ +K I +WHP E SKV G G I D
Sbjct: 398 ICSGDSKSRLFTWDWNTSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKIYVCD 455
>TAIR|locus:2172084 [details] [associations]
symbol:AT5G54520 "AT5G54520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 IPI:IPI00547624 RefSeq:NP_200263.2
UniGene:At.29492 ProteinModelPortal:F4K0D3 SMR:F4K0D3 PRIDE:F4K0D3
EnsemblPlants:AT5G54520.1 GeneID:835540 KEGG:ath:AT5G54520
OMA:PPFKLNK Uniprot:F4K0D3
Length = 457
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 101/312 (32%), Positives = 169/312 (54%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSKA 342
+P R+ + +GHTK V+AI + + HL+ SAG+D V +W+V+ N K +R ++ H+
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 402
V+D+ + G L+ YD + +D E G ++F ++ VVK +PD+ N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNC--NVFLSG 265
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEF 455
S + WD+ + EY + LG + + F+ ++F++SSD + ++ VW+
Sbjct: 266 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 325
Query: 456 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 515
V + ++ P I HP AQS N I+ST F+LNK KRF GH V
Sbjct: 326 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 385
Query: 516 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 575
AG+ + NFSPDG + SG +G + +D+KS + + LK +E C+ +HP+ + VA
Sbjct: 386 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 445
Query: 576 TCGWDGLIKYWD 587
C W+G + ++
Sbjct: 446 ACSWNGQVSVFE 457
>MGI|MGI:3045255 [details] [associations]
symbol:Wdr25 "WD repeat domain 25" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:3045255 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:AC140111 GeneTree:ENSGT00530000063583
EMBL:AK081117 EMBL:AC122811 IPI:IPI00757781 IPI:IPI00989348
RefSeq:NP_808270.2 UniGene:Mm.342082 ProteinModelPortal:E9Q349
SMR:E9Q349 PRIDE:E9Q349 Ensembl:ENSMUST00000047115
Ensembl:ENSMUST00000167816 GeneID:212198 KEGG:mmu:212198 CTD:79446
eggNOG:NOG301329 HOGENOM:HOG000007841 HOVERGEN:HBG069845
OMA:YSVGCEC NextBio:373502 Bgee:E9Q349 Uniprot:E9Q349
Length = 535
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 92/313 (29%), Positives = 163/313 (52%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKY--GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSK 341
+PK+++ GH V++I++ P + H++LSA MD K+W+ +SG C++TY HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETG-QVIRTFSTGKIPYVVKLNPDDDKQNILL 400
AVR + G + L+ +D + D ETG QV S ++ +K +P D N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 341
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 453
G +I WDM T ++ + Y + I F+ F++S+D D+++ W
Sbjct: 342 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 401
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+F I ++ PS++LHP AQ+ N + ++S+ +++++++R+ GH
Sbjct: 402 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 461
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
V GYA SP G +++G +G+ + +++ TL+ H C+G +HP+ S
Sbjct: 462 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 521
Query: 574 VATCGWDGLIKYW 586
+ TC W G IK W
Sbjct: 522 LGTCSWGGDIKIW 534
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 347 (127.2 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 90/335 (26%), Positives = 161/335 (48%)
Query: 259 EEKDYQGRSWVAPPKDAKAANDHCYIPKR----LVHTWSGHTKGVSAIRFFPKYGHLILS 314
EEK + + A P + AA P + L T +GHTK VS+++F P G + S
Sbjct: 4 EEKKPETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN-GEWLAS 62
Query: 315 AGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQV 374
+ D +KIW ++ GK +T GH + D+++ +D ++AS DK +K WD +G+
Sbjct: 63 SSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 375 IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF 434
++T G YV N + + N++++G D+ + WD+ T + + H V+ + F
Sbjct: 122 LKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 435 VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQIL 494
+ V+SS D R+W+ +K + + + + PN ++ A +LDN +
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 495 IYSTRERFQLNKKKRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRT 553
++ + L K + GH Y NFS G++++SG + + W+ ++ ++ +
Sbjct: 240 LWDYSKGKCL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 554 LKCHEGVCIGCEWHPLEQSKVATCGW--DGLIKYW 586
L+ H V I HP E +A+ D IK W
Sbjct: 297 LQGHTDVVISTACHPTENI-IASAALENDKTIKLW 330
Score = 144 (55.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
H AV+++ F N +SS DK +++W K IS H + ++ ++N L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLL 102
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D + I+ L K GH + C NF+P ++SG + WD
Sbjct: 103 VSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWD 157
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
K+ K +TL H ++ + S + + +DGL + WD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Score = 39 (18.8 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 9 DEKEDELDKPENQNDQNPDSAALESSPPHILPS 41
+EK+ E + Q P +AA +S P + P+
Sbjct: 4 EEKKPETEAARAQ--PAPSAAATQSKPTPVKPN 34
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 345 (126.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 89/335 (26%), Positives = 161/335 (48%)
Query: 259 EEKDYQGRSWVAPPKDAKAANDHCYIPKR----LVHTWSGHTKGVSAIRFFPKYGHLILS 314
EEK + + A P + +A P + L T +GHTK VS+++F P G + S
Sbjct: 4 EEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN-GEWLAS 62
Query: 315 AGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQV 374
+ D +KIW ++ GK +T GH + D+++ +D ++AS DK +K WD +G+
Sbjct: 63 SSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 375 IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF 434
++T G YV N + + N++++G D+ + WD+ T + + H V+ + F
Sbjct: 122 LKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 435 VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQIL 494
+ V+SS D R+W+ +K + + + + PN ++ A +LDN +
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 495 IYSTRERFQLNKKKRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRT 553
++ + L K + GH Y NFS G++++SG + + W+ ++ ++ +
Sbjct: 240 LWDYSKGKCL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 554 LKCHEGVCIGCEWHPLEQSKVATCGW--DGLIKYW 586
L+ H V I HP E +A+ D IK W
Sbjct: 297 LQGHTDVVISTACHPTENI-IASAALENDKTIKLW 330
Score = 144 (55.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
H AV+++ F N +SS DK +++W K IS H + ++ ++N L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLL 102
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D + I+ L K GH + C NF+P ++SG + WD
Sbjct: 103 VSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWD 157
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
K+ K +TL H ++ + S + + +DGL + WD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Score = 41 (19.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 9 DEKEDELDKPENQNDQNPDSAALESSPPHILPS 41
+EK+ E + Q P S+A +S P + P+
Sbjct: 4 EEKKPETEAARAQ--PTPSSSATQSKPTPVKPN 34
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 345 (126.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 89/335 (26%), Positives = 161/335 (48%)
Query: 259 EEKDYQGRSWVAPPKDAKAANDHCYIPKR----LVHTWSGHTKGVSAIRFFPKYGHLILS 314
EEK + + A P + +A P + L T +GHTK VS+++F P G + S
Sbjct: 4 EEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN-GEWLAS 62
Query: 315 AGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQV 374
+ D +KIW ++ GK +T GH + D+++ +D ++AS DK +K WD +G+
Sbjct: 63 SSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 375 IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF 434
++T G YV N + + N++++G D+ + WD+ T + + H V+ + F
Sbjct: 122 LKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 435 VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQIL 494
+ V+SS D R+W+ +K + + + + PN ++ A +LDN +
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 495 IYSTRERFQLNKKKRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRT 553
++ + L K + GH Y NFS G++++SG + + W+ ++ ++ +
Sbjct: 240 LWDYSKGKCL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 554 LKCHEGVCIGCEWHPLEQSKVATCGW--DGLIKYW 586
L+ H V I HP E +A+ D IK W
Sbjct: 297 LQGHTDVVISTACHPTENI-IASAALENDKTIKLW 330
Score = 144 (55.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
H AV+++ F N +SS DK +++W K IS H + ++ ++N L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLL 102
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D + I+ L K GH + C NF+P ++SG + WD
Sbjct: 103 VSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWD 157
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
K+ K +TL H ++ + S + + +DGL + WD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Score = 41 (19.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 9 DEKEDELDKPENQNDQNPDSAALESSPPHILPS 41
+EK+ E + Q P S+A +S P + P+
Sbjct: 4 EEKKPETEAARAQ--PTPSSSATQSKPTPVKPN 34
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 345 (126.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 89/335 (26%), Positives = 161/335 (48%)
Query: 259 EEKDYQGRSWVAPPKDAKAANDHCYIPKR----LVHTWSGHTKGVSAIRFFPKYGHLILS 314
EEK + + A P + +A P + L T +GHTK VS+++F P G + S
Sbjct: 4 EEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN-GEWLAS 62
Query: 315 AGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQV 374
+ D +KIW ++ GK +T GH + D+++ +D ++AS DK +K WD +G+
Sbjct: 63 SSADKLIKIWGAYD-GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 121
Query: 375 IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITF 434
++T G YV N + + N++++G D+ + WD+ T + + H V+ + F
Sbjct: 122 LKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 435 VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQIL 494
+ V+SS D R+W+ +K + + + + PN ++ A +LDN +
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 239
Query: 495 IYSTRERFQLNKKKRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRT 553
++ + L K + GH Y NFS G++++SG + + W+ ++ ++ +
Sbjct: 240 LWDYSKGKCL---KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 554 LKCHEGVCIGCEWHPLEQSKVATCGW--DGLIKYW 586
L+ H V I HP E +A+ D IK W
Sbjct: 297 LQGHTDVVISTACHPTENI-IASAALENDKTIKLW 330
Score = 144 (55.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
H AV+++ F N +SS DK +++W K IS H + ++ ++N L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLL 102
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D + I+ L K GH + C NF+P ++SG + WD
Sbjct: 103 VSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWD 157
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
K+ K +TL H ++ + S + + +DGL + WD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Score = 41 (19.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 9 DEKEDELDKPENQNDQNPDSAALESSPPHILPS 41
+EK+ E + Q P S+A +S P + P+
Sbjct: 4 EEKKPETEAARAQ--PTPSSSATQSKPTPVKPN 34
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 360 (131.8 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 94/330 (28%), Positives = 160/330 (48%)
Query: 263 YQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVK 322
YQ + P + YI K +T GH K +S+++F P G + SA D +K
Sbjct: 16 YQEQQQQQPQQTESIPQTPNYILK---YTLKGHLKSISSVKFSPD-GKWLASASADKTIK 71
Query: 323 IWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 382
IW ++ GK RT GH + + DI++ D +AS DK IK WD E+G++++T G
Sbjct: 72 IWGAYD-GKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLK-GH 129
Query: 383 IPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRR 440
YV V NP + N++++G D+ + WD+NT E T+ H V + F +
Sbjct: 130 KEYVFGVSFNP---QSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTL 186
Query: 441 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
V+ S D ++R+W+ ++ IS + + PN ++ A +LDN + ++S
Sbjct: 187 VVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWS--- 243
Query: 501 RFQLNKK--KRFAGHIVAGYACQVNFSPD-GRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ NKK K + GH Y FS G+++++G + + ++ ++ ++ +TL H
Sbjct: 244 -YNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGH 302
Query: 558 EGVCIGCEWHPLEQSKVA-TCGWDGLIKYW 586
E V + HP E + D +K W
Sbjct: 303 EDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 32/163 (19%), Positives = 71/163 (43%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
HL +++++ F + + ++S DK++++W + E H + I+ ++ +
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWG-AYDGKFERTLEGHKEGISDIAWSQDSKLI 103
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D I I+ + K GH Y V+F+P ++SG + WD
Sbjct: 104 CSASDDKTIKIWDVESGKMV---KTLKGH--KEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + + + H G ++ + + V + +DG ++ WD
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNR-DGTLVVSGSYDGTVRIWD 200
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 341 (125.1 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 82/302 (27%), Positives = 149/302 (49%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L T +GHTK VS+++F P G + S+ D +KIW ++ GK +T GH + D++
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVA 94
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
+ +D ++AS DK +K WD +G+ ++T G YV N + + N++++G D+
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDES 152
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+ WD+ T + + H V+ + F + V+SS D R+W+ +K + +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS-P 526
+ + PN ++ A +LDN + ++ + L K + GH Y NFS
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCIFANFSVT 269
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW--DGLIK 584
G++++SG + + W+ ++ ++ + L+ H V I HP E +A+ D IK
Sbjct: 270 GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI-IASAALENDKTIK 328
Query: 585 YW 586
W
Sbjct: 329 LW 330
Score = 242 (90.2 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 61/210 (29%), Positives = 103/210 (49%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+ + T GH+ V F P+ +LI+S D V+IWDV +GKC++T HS V +
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAV 177
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMS 404
F DG+ +++SYD + WDT +GQ ++T P V VK +P+ +LA
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG---KYILAATL 234
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTI--TF-VDNNRRFVTSSDDKSLRVWEFGIPVVI 461
D + WD + + + Y H I F V + V+ S+D + +W ++
Sbjct: 235 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDN 491
+ + + H + S + HP N +A+ +L+N
Sbjct: 295 QKL-QGHTDVVISTACHPTENIIASAALEN 323
Score = 144 (55.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
H AV+++ F N +SS DK +++W K IS H + ++ ++N L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLL 102
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D + I+ L K GH + C NF+P ++SG + WD
Sbjct: 103 VSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWD 157
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
K+ K +TL H ++ + S + + +DGL + WD
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 199
Score = 39 (18.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 10 EKEDELDKPENQNDQNPDSAALESSPPHILPS 41
EK+ E + Q P S+A +S P + P+
Sbjct: 5 EKKPETEAARAQ--PTPSSSATQSKPTPVKPN 34
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 341 (125.1 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 82/302 (27%), Positives = 149/302 (49%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L T +GHTK VS+++F P G + S+ D +KIW ++ GK +T GH + D++
Sbjct: 11 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVA 68
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
+ +D ++AS DK +K WD +G+ ++T G YV N + + N++++G D+
Sbjct: 69 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDES 126
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+ WD+ T + + H V+ + F + V+SS D R+W+ +K + +
Sbjct: 127 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 186
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS-P 526
+ + PN ++ A +LDN + ++ + L K + GH Y NFS
Sbjct: 187 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCIFANFSVT 243
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW--DGLIK 584
G++++SG + + W+ ++ ++ + L+ H V I HP E +A+ D IK
Sbjct: 244 GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENI-IASAALENDKTIK 302
Query: 585 YW 586
W
Sbjct: 303 LW 304
Score = 242 (90.2 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 61/210 (29%), Positives = 103/210 (49%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+ + T GH+ V F P+ +LI+S D V+IWDV +GKC++T HS V +
Sbjct: 94 KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAV 151
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMS 404
F DG+ +++SYD + WDT +GQ ++T P V VK +P+ +LA
Sbjct: 152 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG---KYILAATL 208
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTI--TF-VDNNRRFVTSSDDKSLRVWEFGIPVVI 461
D + WD + + + Y H I F V + V+ S+D + +W ++
Sbjct: 209 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 268
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDN 491
+ + + H + S + HP N +A+ +L+N
Sbjct: 269 QKL-QGHTDVVISTACHPTENIIASAALEN 297
Score = 144 (55.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
H AV+++ F N +SS DK +++W K IS H + ++ ++N L
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLL 76
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D + I+ L K GH + C NF+P ++SG + WD
Sbjct: 77 VSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWD 131
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
K+ K +TL H ++ + S + + +DGL + WD
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 173
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 335 (123.0 bits), Expect = 7.1e-30, P = 7.1e-30
Identities = 84/304 (27%), Positives = 149/304 (49%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L T +GHTK VSA++F P G + S+ D +KIW ++ GK +T GH + D++
Sbjct: 64 LKFTLAGHTKAVSAVKFSPN-GEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVA 121
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
+ +D ++ S DK +K W+ TG+ ++T G YV N + + N++++G D+
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDES 179
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+ WD+ T + + H V+ + F + V+SS D R+W+ +K + +
Sbjct: 180 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 239
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS-P 526
+ + PN ++ A +LDN + ++ + L K + GH Y NFS
Sbjct: 240 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCIFANFSVT 296
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG--VCIGCEWHPLEQSKVATCGW--DGL 582
G++++SG + + W+ +S +V + L+ H +C C HP E +A+ D
Sbjct: 297 GGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTAC--HPTENI-IASAALENDKT 353
Query: 583 IKYW 586
IK W
Sbjct: 354 IKLW 357
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
H AV+ + F N +SS DK +++W K IS H + ++ ++ L
Sbjct: 71 HTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSRLL 129
Query: 485 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S D + ++ L K GH + C NF+P ++SG + WD
Sbjct: 130 VSGSDDKTLKVWELSTGKSL---KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWD 184
Query: 545 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
++ K +TL H ++ + S + + +DGL + WD
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWD 226
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 333 (122.3 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 82/302 (27%), Positives = 148/302 (49%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L T +GHTK VS+++F P G + S+ D +KIW ++ GK +T GH + D++
Sbjct: 37 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYD-GKFEKTISGHKLGISDVA 94
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
+ +D ++AS DK +K WD +G+ ++T G YV N + + N++++G D+
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDES 152
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+ WD+ T + + H V+ + F + V+SS D R+W+ +K + +
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS-P 526
+ + PN ++ A +LDN + ++ + L K + H Y NFS
Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTCHKNEKYCIFANFSVT 269
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW--DGLIK 584
G++++SG + + W+ ++ +V + L+ H V I HP E +A+ D IK
Sbjct: 270 GGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENI-IASAALENDKTIK 328
Query: 585 YW 586
W
Sbjct: 329 LW 330
Score = 242 (90.2 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 62/210 (29%), Positives = 103/210 (49%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+ + T GH+ V F P+ +LI+S D V+IWDV +GKC++T HS V +
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAV 177
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMS 404
F DG+ +++SYD + WDT +GQ ++T P V VK +P+ +LA
Sbjct: 178 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG---KYILAATL 234
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTI--TF-VDNNRRFVTSSDDKSLRVWEFGIPVVI 461
D + WD + + + Y H I F V + V+ S+D + +W V+
Sbjct: 235 DNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVV 294
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDN 491
+ + + H + S + HP N +A+ +L+N
Sbjct: 295 QKL-QGHTDVVISTACHPTENIIASAALEN 323
Score = 204 (76.9 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 64/257 (24%), Positives = 113/257 (43%)
Query: 335 TYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD 394
T GH+KAV + F +G ++S DK IK W G+ +T S K+ + + D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG-ISDVAWSSD 98
Query: 395 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
N+L++ DK + WD+++ + + H V F + V+ S D+S+R+W+
Sbjct: 99 S-NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 455 FGIPVVIKYISEPHMHSMPSISLHPNTNW--LAAQSLDNQILIYSTRERFQLNKKKRFAG 512
+K + P HS P ++H N + + + S D I+ T Q K
Sbjct: 158 VKTGKCLKTL--P-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 213
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEWHPLE 570
+ + V FSP+G+++++ + WD+ K +T CH E CI +
Sbjct: 214 NPPVSF---VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTG 270
Query: 571 QSKVATCGWDGLIKYWD 587
+ + D L+ W+
Sbjct: 271 GKWIVSGSEDNLVYIWN 287
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 341 (125.1 bits), Expect = 9.0e-29, P = 9.0e-29
Identities = 109/417 (26%), Positives = 184/417 (44%)
Query: 189 PAEVNNPATDSWLMKNR---KSPWA-GKKEGVQTELTXXXXXXXXXXXXXXX--DKGN-A 241
P E+ A W +NR SPWA +E + E D G A
Sbjct: 64 PDELAMDADVYWRSRNRGRDDSPWARSDEENDENEADEEENENEDDEHDNMNGDDNGREA 123
Query: 242 GGEKGEHVEDKSTFHGKEEKDYQGRSW--VAPPKDAKAANDHCYIPKRLVHTWSGHTKGV 299
G + +++ T E + RS V PP K + + Y K L+ GH +GV
Sbjct: 124 NGSRERDLDEMDTVGENEPETDPDRSPTPVPPPPPPKPESVN-YRQKFLLR---GHLRGV 179
Query: 300 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAS 359
SA+RF P +I S G D VK+W ++GK + T+ GH + IS+ DG + S
Sbjct: 180 SAVRFSPD-ASMIASGGADGAVKVWAA-STGKLIYTFEGHLAGISTISWSPDGATIASGS 237
Query: 360 YDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT 419
DK I+ W+ TG+ T G YV + K N+L++G D+ + WD+ + +
Sbjct: 238 DDKTIRLWNVLTGKAHPTPFIGHHNYVYAI-AFSPKGNMLVSGSYDEAVFLWDVRSARVM 296
Query: 420 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP 479
+ H V+ I V + + + D +R+W+ ++ + + S+ P
Sbjct: 297 KSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSP 356
Query: 480 NTNWLAAQSLDNQILIYSTRE-----RFQ--LNKKKRFAGHI-VAGYACQVNFSPDGRFV 531
N ++ A +LD+ + ++ E +Q NKK +G V G + +P F
Sbjct: 357 NGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGR-TPGYAFA 415
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK-VATCGWDGLIKYWD 587
+SG +G WD + KV + ++ H+GV +G + + + + +CG DG ++ W+
Sbjct: 416 VSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 319 (117.4 bits), Expect = 4.3e-28, P = 4.3e-28
Identities = 82/322 (25%), Positives = 156/322 (48%)
Query: 271 PPKDAKAANDHCYIPK---RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVF 327
P A + IP +L+ T GHTK +SA++F P G + ++ D VKIW++
Sbjct: 51 PEATAPTTSQESTIPGAGYKLISTIEGHTKSISAVKFSP-CGKFLGTSSADKTVKIWNMS 109
Query: 328 NSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 387
+ C RT GH V D ++ D +TAS DK +K ++ T ++ +T G YV
Sbjct: 110 DLS-CERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLK-GHTNYVF 167
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
N + + +++++G D+ + WD+ T + H V+ ++F + + S D
Sbjct: 168 CCN-FNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYD 226
Query: 448 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 507
+R+W+ +K + + + + PN ++ + +LDN + ++ + L
Sbjct: 227 GLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTL--- 283
Query: 508 KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 566
K++ GH Y NFS G++++SG + K + W+ ++ +V ++L+ H I +
Sbjct: 284 KQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDC 343
Query: 567 HPLEQSKVATCGW--DGLIKYW 586
HP+ Q+ +A+ D I+ W
Sbjct: 344 HPM-QNMIASGALEPDNTIRIW 364
Score = 252 (93.8 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 71/243 (29%), Positives = 114/243 (46%)
Query: 267 SWVAPPKDAKAANDH----CY-IPK-RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTK 320
+W A K A+D Y +P ++ T GHT V F P+ L++S D
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQ-SSLVVSGSFDES 186
Query: 321 VKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST 380
V+IWDV +G C++T HS V +SF DG+ + SYD ++ WDT GQ ++T
Sbjct: 187 VRIWDV-RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVD 245
Query: 381 GKIPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTI--TF-V 435
+ P V VK +P+ +L+ D + WD + ++Y H I F V
Sbjct: 246 DENPPVAFVKFSPNG---KYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSV 302
Query: 436 DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL--DNQI 493
+ ++ S+D + VW V++ + E H ++ + HP N +A+ +L DN I
Sbjct: 303 TGGKWIISGSEDCKIYVWNLQTKEVVQSL-EGHTQAVIASDCHPMQNMIASGALEPDNTI 361
Query: 494 LIY 496
I+
Sbjct: 362 RIW 364
Score = 138 (53.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 42/186 (22%), Positives = 84/186 (45%)
Query: 404 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV-IK 462
+DK + W+M+ + H VN + +++ VT+SDDK+L+++E +P V +
Sbjct: 99 ADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYE--VPTVKMA 156
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ H + + + +P ++ + + S D + I+ R + K H + V
Sbjct: 157 KTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCV---KTLPAH--SDPVSAV 211
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDG 581
+F+ DG + SG +G WD + + +TL E + ++ P + + D
Sbjct: 212 SFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP-NGKYILSSNLDN 270
Query: 582 LIKYWD 587
+K WD
Sbjct: 271 TLKLWD 276
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 319 (117.4 bits), Expect = 4.3e-28, P = 4.3e-28
Identities = 75/302 (24%), Positives = 148/302 (49%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T +GH+ +S+++F P G + S+ D + IW ++ G C +T GHS + D+++ +
Sbjct: 34 TLAGHSAAISSVKFSPN-GEWLASSAADALIIIWGAYD-GNCKKTLYGHSLEISDVAWSS 91
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKI 408
D ++ ++AS DK +K WD +G+ ++T G +V NP N++++G D+ +
Sbjct: 92 DSSRLVSASDDKTLKVWDMRSGKCLKTLK-GHSDFVFCCDFNPPS---NLIVSGSFDESV 147
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
W++ T + + H ++ + F N V+ S D R+W+ ++ +++
Sbjct: 148 KIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEG 207
Query: 469 MHSMPSISLHPNTNWLAAQSLDNQILIYS-TRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
+ + PN ++ +LDN + ++ +R R K + GH Y +FS
Sbjct: 208 NPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCL----KTYTGHKNEKYCLFASFSVT 263
Query: 528 GR-FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW--DGLIK 584
GR +V+SG + + W+ ++ ++ + L+ H V I HP + +A+ D IK
Sbjct: 264 GRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNI-IASAALENDKTIK 322
Query: 585 YW 586
W
Sbjct: 323 VW 324
Score = 186 (70.5 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 48/172 (27%), Positives = 83/172 (48%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA-VRD 345
+ + T S H+ +SA+ F G LI+S D +IWD SG+C+RT V
Sbjct: 156 KCLKTLSAHSDPISAVNFNCN-GSLIVSGSYDGLCRIWDAA-SGQCLRTLADEGNPPVSF 213
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YVVKLNPDDDKQNILLAGMS 404
+ F +G LTA+ D +K WD G+ ++T++ K Y + + + +++G
Sbjct: 214 VKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSE 273
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSS---DDKSLRVW 453
D + W++ TKEI Q H V + + + S+ +DK+++VW
Sbjct: 274 DNMVYIWNLQTKEIVQRLQGHTDVVISAA-CHPTKNIIASAALENDKTIKVW 324
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 309 (113.8 bits), Expect = 5.5e-27, P = 5.5e-27
Identities = 79/307 (25%), Positives = 146/307 (47%)
Query: 289 VH--TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDV--FNS--GKCMRTYMGHSKA 342
VH T + H + VS+++F G L+ SA D ++ + + N + ++ + GH
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILL 400
+ D++F +D ++AS DK +K WD ETG +I+T G Y V NP + N+++
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTL-IGHTNYAFCVNFNP---QSNMIV 129
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D+ + WD+ T + + H V + F + V+SS D R+W+ G
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 189
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+K + + + + PN ++ +LDN + +++ L K + GH+ A Y
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFL---KTYTGHVNAQYCI 246
Query: 521 QVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
FS +G+ ++SG + W+ S K+ + L+ H + HP E + +A+
Sbjct: 247 SSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE-NLIASGSL 305
Query: 580 DGLIKYW 586
D ++ W
Sbjct: 306 DKTVRIW 312
Score = 286 (105.7 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 61/218 (27%), Positives = 117/218 (53%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L+ T GHT + F P+ ++I+S D V+IWDV +GKC++ HS V +
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDV-TTGKCLKVLPAHSDPVTAVD 162
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSD 405
F DG+ +++SYD + WD+ TG ++T + P V V+ +P+ +L G D
Sbjct: 163 FNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG---KFILVGTLD 219
Query: 406 KKIVQWDMNTKEITQEYDQHLGA---VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
+ W++++ + + Y H+ A +++ V N +R V+ S+D + +WE +++
Sbjct: 220 NTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ 279
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
+ E H ++ +++ HP N +A+ SLD + I++ ++
Sbjct: 280 KL-EGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 39/175 (22%), Positives = 77/175 (44%)
Query: 419 TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP------HMHSM 472
+Q H AV+++ F + R ++S DK++R + I + I+EP H + +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYT--INTINDPIAEPVQEFTGHENGI 74
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 532
++ + ++ + S D + ++ + K GH YA VNF+P ++
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDVETGSLI---KTLIGH--TNYAFCVNFNPQSNMIV 129
Query: 533 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
SG + WD + K + L H +++ + S + + +DGL + WD
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR-DGSLIVSSSYDGLCRIWD 183
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 306 (112.8 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 80/310 (25%), Positives = 138/310 (44%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G+ AP +A C + + SGH V +F P G + SAG D + +W
Sbjct: 36 GQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPN-GSTLASAGFDRLILLW 94
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
+V+ T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G
Sbjct: 95 NVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTS 153
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
+V P ++ G D + WD+ K Q + Q+ V +TF D + + ++
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISG 212
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F
Sbjct: 213 GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAP 270
Query: 505 NKK--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 560
++ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 271 KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 330
Query: 561 CIGCEWHPLE 570
+HP E
Sbjct: 331 INEVAFHPDE 340
Score = 190 (71.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 63/260 (24%), Positives = 111/260 (42%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GH+ V + + G ++ SA D V +WD +G+ ++ GH+ V
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVWDS-ETGERVKRLKGHTSFVNSCYPAR 162
Query: 351 DGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
G + + T S D +K WD I+TF V N D+ +++G D I
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIK 219
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY----IS 465
WD+ ++T H +V ++ ++++ D ++RVW+ P K I
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR-PFAPKERCVKIF 278
Query: 466 EPHMHSMPS----ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
+ ++H+ S P+ + +AA S D + ++ T R L K GH AG +
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK---LPGH--AGSINE 333
Query: 522 VNFSPDGRFVMSGDGEGKCW 541
V F PD ++S + + +
Sbjct: 334 VAFHPDEPIILSASSDKRLY 353
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K + T+ +T V A+ F +I S G+D +K+WD+ K T GH+ +V
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDL-RQNKLTYTMRGHADSVTG 241
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYVVKL-----NPDDDKQ 396
+S ++G+ L+ + D ++ WD + ++ F + L +PD K
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK- 300
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+ AG +D+ + WD ++ I + H G++N + F + +++S DK L + E
Sbjct: 301 --IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGE 356
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 306 (112.8 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 80/310 (25%), Positives = 138/310 (44%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G+ AP +A C + + SGH V +F P G + SAG D + +W
Sbjct: 36 GQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPN-GSTLASAGFDRLILLW 94
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
+V+ T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G
Sbjct: 95 NVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTS 153
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
+V P ++ G D + WD+ K Q + Q+ V +TF D + + ++
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISG 212
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F
Sbjct: 213 GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAP 270
Query: 505 NKK--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 560
++ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 271 KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 330
Query: 561 CIGCEWHPLE 570
+HP E
Sbjct: 331 INEVAFHPDE 340
Score = 190 (71.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 63/260 (24%), Positives = 111/260 (42%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GH+ V + + G ++ SA D V +WD +G+ ++ GH+ V
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVWDS-ETGERVKRLKGHTSFVNSCYPAR 162
Query: 351 DGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
G + + T S D +K WD I+TF V N D+ +++G D I
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIK 219
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY----IS 465
WD+ ++T H +V ++ ++++ D ++RVW+ P K I
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR-PFAPKERCVKIF 278
Query: 466 EPHMHSMPS----ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
+ ++H+ S P+ + +AA S D + ++ T R L K GH AG +
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK---LPGH--AGSINE 333
Query: 522 VNFSPDGRFVMSGDGEGKCW 541
V F PD ++S + + +
Sbjct: 334 VAFHPDEPIILSASSDKRLY 353
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K + T+ +T V A+ F +I S G+D +K+WD+ K T GH+ +V
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDL-RQNKLTYTMRGHADSVTG 241
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYVVKL-----NPDDDKQ 396
+S ++G+ L+ + D ++ WD + ++ F + L +PD K
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK- 300
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+ AG +D+ + WD ++ I + H G++N + F + +++S DK L + E
Sbjct: 301 --IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGE 356
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 305 (112.4 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 76/282 (26%), Positives = 130/282 (46%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V +F P +G+ + SAG D + +W+V+ T GHS AV ++ + DG
Sbjct: 90 SGHEGEVYCCKFHP-WGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +AS DK + WD+ETG+ ++ G +V P ++ G D + WD
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
+ K Q + Q+ V +TF D + + ++ D ++VW+ + Y H S+
Sbjct: 208 IRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSV 265
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK--KRFAG--HIVAGYACQVNFSPDG 528
+SL ++L + ++DN + I+ R F ++ K F G H + ++SPDG
Sbjct: 266 TGLSLSSEGSYLLSNAMDNTVRIWDVRP-FAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 324
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
+ G + + WD S ++ L H G +HP E
Sbjct: 325 SKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEE 366
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 45/178 (25%), Positives = 81/178 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V T+ +T V A+ F +I S G+D +K+WD+ K T GH+ +V
Sbjct: 211 KAAVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDL-RQNKLTYTMRGHADSVTG 267
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYVVKL-----NPDDDKQ 396
+S ++G+ L+ + D ++ WD + ++ F + L +PD K
Sbjct: 268 LSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK- 326
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+ G +D+ + WD ++ I + H G+VN + F +++S DK L + E
Sbjct: 327 --IAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGE 382
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 304 (112.1 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 79/309 (25%), Positives = 136/309 (44%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G+ AP +A C + + SGH V +F P G + SAG D + +W
Sbjct: 36 GQQQAAPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPN-GSTLASAGFDRLILLW 94
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
+V+ T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G
Sbjct: 95 NVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTS 153
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
+V P ++ G D + WD+ K Q + Q+ V +TF D + + ++
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISG 212
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R
Sbjct: 213 GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPK 271
Query: 505 NKKKR-FAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ R F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 272 ERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSI 331
Query: 562 IGCEWHPLE 570
+HP E
Sbjct: 332 NEVAFHPDE 340
Score = 190 (71.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 63/260 (24%), Positives = 111/260 (42%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GH+ V + + G ++ SA D V +WD +G+ ++ GH+ V
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVWDS-ETGERVKRLKGHTSFVNSCYPAR 162
Query: 351 DGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
G + + T S D +K WD I+TF V N D+ +++G D I
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIK 219
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY----IS 465
WD+ ++T H +V ++ ++++ D ++RVW+ P K I
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR-PFAPKERCVRIF 278
Query: 466 EPHMHSMPS----ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
+ ++H+ S P+ + +AA S D + ++ T R L K GH AG +
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK---LPGH--AGSINE 333
Query: 522 VNFSPDGRFVMSGDGEGKCW 541
V F PD ++S + + +
Sbjct: 334 VAFHPDEPIILSASSDKRLY 353
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 45/178 (25%), Positives = 83/178 (46%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K + T+ +T V A+ F +I S G+D +K+WD+ K T GH+ +V
Sbjct: 185 KAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDL-RQNKLTYTMRGHADSVTG 241
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYVVKL-----NPDDDKQ 396
+S ++G+ L+ + D ++ WD + +R F + L +PD K
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSK- 300
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+ AG +D+ + WD ++ I + H G++N + F + +++S DK L + E
Sbjct: 301 --IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGE 356
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 302 (111.4 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 79/310 (25%), Positives = 137/310 (44%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G+ P +A C + + SGH V +F P G + SAG D + +W
Sbjct: 35 GQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPN-GSTLASAGFDRLILLW 93
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
+V+ T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G
Sbjct: 94 NVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTS 152
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
+V P ++ G D + WD+ K Q + Q+ V +TF D + + ++
Sbjct: 153 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISG 211
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F
Sbjct: 212 GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAP 269
Query: 505 NKK--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 560
++ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 270 KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 329
Query: 561 CIGCEWHPLE 570
+HP E
Sbjct: 330 INEVAFHPDE 339
Score = 164 (62.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K + T+ +T V A+ F +I S G+D +K+WD+ K T GH+ +V
Sbjct: 184 KAAIQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDL-RQNKLTYTMRGHADSVTG 240
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYVVKL-----NPDDDKQ 396
+S ++G+ L+ + D ++ WD + ++ F + L +PD K
Sbjct: 241 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK- 299
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+ AG +D+ + WD ++ I + H G++N + F + +++S DK L + E
Sbjct: 300 --IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGE 355
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 302 (111.4 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 79/310 (25%), Positives = 137/310 (44%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G+ P +A C + + SGH V +F P G + SAG D + +W
Sbjct: 35 GQQQATPGALLQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPN-GSTLASAGFDRLILLW 93
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
+V+ T GHS AV ++ + DG+ +AS DK + WD+ETG+ ++ G
Sbjct: 94 NVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLK-GHTS 152
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
+V P ++ G D + WD+ K Q + Q+ V +TF D + + ++
Sbjct: 153 FVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISG 211
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
D ++VW+ + Y H S+ +SL ++L + ++DN + ++ R F
Sbjct: 212 GIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAP 269
Query: 505 NKK--KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 560
++ K F G H + ++SPDG + +G + + WD S ++ L H G
Sbjct: 270 KERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS 329
Query: 561 CIGCEWHPLE 570
+HP E
Sbjct: 330 INEVAFHPDE 339
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 301 (111.0 bits), Expect = 4.2e-26, P = 4.2e-26
Identities = 76/282 (26%), Positives = 129/282 (45%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V +F P G + SAG D + +W+V+ T GHS AV ++ + DG
Sbjct: 64 SGHEGEVYCCKFHPN-GSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +AS DK + WD+ETG+ ++ G +V P ++ G D + WD
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
+ K Q + Q+ V +TF D + + ++ D ++VW+ + Y H S+
Sbjct: 182 IRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSV 239
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK--KRFAG--HIVAGYACQVNFSPDG 528
+SL ++L + ++DN + ++ R F ++ K F G H + ++SPDG
Sbjct: 240 TGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
+ +G + + WD S +V L H G +HP E
Sbjct: 299 SKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDE 340
Score = 190 (71.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 62/260 (23%), Positives = 111/260 (42%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GH+ V + + G ++ SA D V +WD +G+ ++ GH+ V
Sbjct: 105 TLKGHSGAVMELHYNTD-GSMLFSASTDKTVAVWDS-ETGERVKRLKGHTSFVNSCYPAR 162
Query: 351 DGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
G + + T S D +K WD ++TF V N D+ +++G D I
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQ---IISGGIDNDIK 219
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY----IS 465
WD+ ++T H +V ++ ++++ D ++RVW+ P K I
Sbjct: 220 VWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR-PFAPKERCVKIF 278
Query: 466 EPHMHSMPS----ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
+ ++H+ S P+ + +AA S D + ++ T R L K GH AG +
Sbjct: 279 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYK---LPGH--AGSINE 333
Query: 522 VNFSPDGRFVMSGDGEGKCW 541
V F PD ++S + + +
Sbjct: 334 VAFHPDEPIILSASSDKRLY 353
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 44/178 (24%), Positives = 83/178 (46%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V T+ +T V A+ F +I S G+D +K+WD+ K T GH+ +V
Sbjct: 185 KAAVQTFQ-NTYQVLAVTFNDTSDQII-SGGIDNDIKVWDL-RQNKLTYTMRGHADSVTG 241
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKIPYVVKL-----NPDDDKQ 396
+S ++G+ L+ + D ++ WD + ++ F + L +PD K
Sbjct: 242 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK- 300
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+ AG +D+ + WD ++ + + H G++N + F + +++S DK L + E
Sbjct: 301 --IAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGE 356
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 300 (110.7 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 77/292 (26%), Positives = 133/292 (45%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V ++F P G LI S D ++ +W V K GH A+ D+ + +DG
Sbjct: 50 SGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
++ ++AS DK ++ WD ETG+ I+ + +V P ++++G D WD
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIISGSDDGTAKLWD 167
Query: 413 MNTKEITQEY-DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
M + Q + D++ + ++F D + T D ++VW+ + E H +
Sbjct: 168 MRQRGAIQTFPDKY--QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDT 224
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHI--VAGYACQVNFSPDG 528
+ +SL P+ ++L +DN++ ++ R N+ K F GH + ++SPDG
Sbjct: 225 ITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDG 284
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
V +G + WD S + L H G C +HP E + +C D
Sbjct: 285 TKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI-IGSCSSD 335
Score = 140 (54.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 39/152 (25%), Positives = 65/152 (42%)
Query: 312 ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET 371
I + G+D VK+WD+ G+ T GH + +S DG+ LT D + WD
Sbjct: 195 IFTGGVDNDVKVWDL-RKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRP 253
Query: 372 ----GQVIRTFSTGKIPYVVKL-----NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEY 422
+ ++ F + + L +PD K + AG SD+ + WD ++ +
Sbjct: 254 YAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTK---VTAGSSDRMVHIWDTTSRRTIYKL 310
Query: 423 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
H G+VN F + S DK++ + E
Sbjct: 311 PGHTGSVNECVFHPTEPIIGSCSSDKNIYLGE 342
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 296 (109.3 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 82/326 (25%), Positives = 158/326 (48%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G S P +A A+ +L+ T GHTK +S+ +F P G + ++ D VKIW
Sbjct: 56 GASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSP-CGKYLGTSSADKTVKIW 114
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
++ + C RT GH V DI++ +D ++AS DK +K ++ T ++ +T G
Sbjct: 115 NMDHM-ICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNN 172
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
YV N + + +++++G D+ + WD+ T + H V+ ++F + +
Sbjct: 173 YVFCCN-FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
S D +R+W+ IK + + + + PN ++ A +LD+ + ++ F
Sbjct: 232 SYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD----FSK 287
Query: 505 NKK-KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 562
K K++ GH + Y NFS G++++SG + K + W+ ++ ++ + L+ H +
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVL 347
Query: 563 GCEWHPLEQSKVATCGW--DGLIKYW 586
+ HP+ Q+ +A+ D I W
Sbjct: 348 ASDCHPV-QNIIASGALEPDNKIHIW 372
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/185 (22%), Positives = 86/185 (46%)
Query: 404 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 463
+DK + W+M+ + H VN I + ++R V++SDDK+L+++E + K
Sbjct: 107 ADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT 166
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
+ + H + + + +P ++ + + S D + I+ + + K H + V+
Sbjct: 167 L-KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI---KTLPAH--SDPVSAVS 220
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDGL 582
F+ DG + SG +G WD + + +TL E + ++ P + +A+ D
Sbjct: 221 FNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDST 279
Query: 583 IKYWD 587
+K WD
Sbjct: 280 LKLWD 284
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 296 (109.3 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 82/326 (25%), Positives = 158/326 (48%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G S P +A A+ +L+ T GHTK +S+ +F P G + ++ D VKIW
Sbjct: 56 GASAQTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSP-CGKYLGTSSADKTVKIW 114
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
++ + C RT GH V DI++ +D ++AS DK +K ++ T ++ +T G
Sbjct: 115 NMDHM-ICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLK-GHNN 172
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
YV N + + +++++G D+ + WD+ T + H V+ ++F + +
Sbjct: 173 YVFCCN-FNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASG 231
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
S D +R+W+ IK + + + + PN ++ A +LD+ + ++ F
Sbjct: 232 SYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD----FSK 287
Query: 505 NKK-KRFAGHIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 562
K K++ GH + Y NFS G++++SG + K + W+ ++ ++ + L+ H +
Sbjct: 288 GKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVL 347
Query: 563 GCEWHPLEQSKVATCGW--DGLIKYW 586
+ HP+ Q+ +A+ D I W
Sbjct: 348 ASDCHPV-QNIIASGALEPDNKIHIW 372
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/185 (22%), Positives = 86/185 (46%)
Query: 404 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 463
+DK + W+M+ + H VN I + ++R V++SDDK+L+++E + K
Sbjct: 107 ADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT 166
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
+ + H + + + +P ++ + + S D + I+ + + K H + V+
Sbjct: 167 L-KGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI---KTLPAH--SDPVSAVS 220
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG-CEWHPLEQSKVATCGWDGL 582
F+ DG + SG +G WD + + +TL E + ++ P + +A+ D
Sbjct: 221 FNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILAS-NLDST 279
Query: 583 IKYWD 587
+K WD
Sbjct: 280 LKLWD 284
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 320 (117.7 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 84/303 (27%), Positives = 150/303 (49%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L+ T GH+ V ++ F P G L+ S D + +WD +G+ ++T+ GH ++ ++
Sbjct: 784 LLQTLDGHSGTVESLAFSPD-GKLLASGSYDNTIDLWDSA-TGELLQTFEGHPHSIWSVA 841
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQNILLAGMS-D 405
F DG + +AS D IK WD TG++ +T S + V +PD LLA S D
Sbjct: 842 FAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGK----LLASSSLD 897
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
I W+ T E+ Q + G V ++ F + ++ + S+ ++++W +++ +
Sbjct: 898 STIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTL- 956
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIY-STRERFQLNKKKRFAGHIVAGYACQVNF 524
E H S+ S++ P+ LA+ S D I ++ ST Q + F GH + + V F
Sbjct: 957 EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQ----QTFKGHDL--WIRAVAF 1010
Query: 525 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 584
SPDG+ ++SG + WD + ++ ++L+ H + P + ++A+ D IK
Sbjct: 1011 SPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSP-DDKQLASSSLDSTIK 1069
Query: 585 YWD 587
WD
Sbjct: 1070 LWD 1072
Score = 299 (110.3 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 79/302 (26%), Positives = 152/302 (50%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L + G + V ++ F P G + S VK+W+ +G+ ++T GHS++VR ++
Sbjct: 910 LQQSLEGRSGWVKSVAFSPD-GKKLASGSEKNTVKLWNPA-TGELLQTLEGHSQSVRSVA 967
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSD 405
F DG + ++S D IK W++ TG++ +TF G ++ V +PD L++G D
Sbjct: 968 FSPDGKQLASSSSDTTIKLWNSTTGELQQTFK-GHDLWIRAVAFSPDGKH---LVSGSDD 1023
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
I WD+ T E+ Q + H +V+ + F ++++ +SS D ++++W+ + + +
Sbjct: 1024 NTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL- 1082
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 525
E H + S++ P+ LA+ S D I +++ +L ++ G + + V FS
Sbjct: 1083 EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG-EL--QQTLTGR--SDWVDSVAFS 1137
Query: 526 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 585
PDG+ + SG + WD + ++ +TL+ H + P + +A+ +D K
Sbjct: 1138 PDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQTAKL 1196
Query: 586 WD 587
WD
Sbjct: 1197 WD 1198
Score = 284 (105.0 bits), Expect = 8.2e-21, Sum P(2) = 8.2e-21
Identities = 83/305 (27%), Positives = 152/305 (49%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L+ T+ GH + ++ F P G + SA D+ +KIWD+ +G+ +T HS++VR ++
Sbjct: 826 LLQTFEGHPHSIWSVAFAPD-GKELASASDDSTIKIWDLA-TGELQQTLDSHSQSVRSVA 883
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSD 405
F DG ++S D IK W+ TG++ ++ G+ +V V +PD K LA S+
Sbjct: 884 FSPDGKLLASSSLDSTIKVWNPATGELQQSLE-GRSGWVKSVAFSPDGKK----LASGSE 938
Query: 406 KKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI 464
K V+ W+ T E+ Q + H +V ++ F + ++ +SS D ++++W ++
Sbjct: 939 KNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN-STTGELQQT 997
Query: 465 SEPHMHSMPSISLHPNTNWLAAQSLDNQILIY--STRERFQLNKKKRFAGHIVAGYACQV 522
+ H + +++ P+ L + S DN I ++ +T E Q + + H VA
Sbjct: 998 FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA------ 1051
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGL 582
FSPD + + S + WD + ++ RTL+ H + P + +A+ +DG
Sbjct: 1052 -FSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGT 1109
Query: 583 IKYWD 587
IK W+
Sbjct: 1110 IKLWN 1114
Score = 278 (102.9 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 82/269 (30%), Positives = 134/269 (49%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H++ V A+ F P L S+ +D+ +K+WD +G+ RT GHS+ VR ++F DG
Sbjct: 1043 HSRSVHAVAFSPDDKQLA-SSSLDSTIKLWDSA-TGELQRTLEGHSQGVRSVTFSPDGKL 1100
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQWD 412
+ SYD IK W+ TG++ +T TG+ +V V +PD KQ L +G D I WD
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQTL-TGRSDWVDSVAFSPDG-KQ--LASGYYDSTIKLWD 1156
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
T E+ Q + H + ++ F + + + S D++ ++W+ +++ I E H +
Sbjct: 1157 SATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQ-IFEGHSKWV 1215
Query: 473 PSISLHPNTNWLAAQSLDNQILIYS--TRERFQ-LNKKKRFAGHIVAGYACQVNFSPDGR 529
S++ P+ LA+ S I ++ T E Q LN AG + FSPDG
Sbjct: 1216 ESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA--------FSPDGN 1267
Query: 530 FVMSGD-GEGKCWFWDWKSCKVFRTLKCH 557
+ S D + K WD + ++ + LK H
Sbjct: 1268 RLASVDIFDTK--IWDPATGELLQALKGH 1294
Score = 270 (100.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 82/301 (27%), Positives = 139/301 (46%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T H V ++ F P G ++S D VKIWD +G+ ++T GHS V ++F
Sbjct: 745 TLENHLGPVESVVFSPD-GKQLVSGSYDDTVKIWDPA-TGELLQTLDGHSGTVESLAFSP 802
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YVVKLNPDDDKQNILLAGMSDKKIV 409
DG + SYD I WD+ TG++++TF + V PD + LA SD +
Sbjct: 803 DGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE----LASASDDSTI 858
Query: 410 Q-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
+ WD+ T E+ Q D H +V ++ F + + +SS D +++VW + + + E
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSL-EGR 917
Query: 469 MHSMPSISLHPNTNWLAAQSLDNQILIYS--TRERFQLNKKKRFAGHIVAGYACQVNFSP 526
+ S++ P+ LA+ S N + +++ T E Q GH + V FSP
Sbjct: 918 SGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQT-----LEGHSQS--VRSVAFSP 970
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
DG+ + S + W+ + ++ +T K H+ + P + + + D IK W
Sbjct: 971 DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP-DGKHLVSGSDDNTIKLW 1029
Query: 587 D 587
D
Sbjct: 1030 D 1030
Score = 270 (100.1 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 74/301 (24%), Positives = 141/301 (46%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L+ T GH++ V ++ F P G + S+ DT +K+W+ +G+ +T+ GH +R ++
Sbjct: 952 LLQTLEGHSQSVRSVAFSPD-GKQLASSSSDTTIKLWNS-TTGELQQTFKGHDLWIRAVA 1009
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSDK 406
F DG ++ S D IK WD T ++ ++ + + V +PDD KQ L + D
Sbjct: 1010 FSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDD-KQ--LASSSLDS 1066
Query: 407 KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE 466
I WD T E+ + + H V ++TF + + ++S D ++++W + ++
Sbjct: 1067 TIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN-PLTGELQQTLT 1125
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 526
+ S++ P+ LA+ D+ I ++ + L + GH + V FSP
Sbjct: 1126 GRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELL---QTLEGH--SDRIQSVVFSP 1180
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
DG+ + SG + WD + ++ + + H + P + +A+ + IK W
Sbjct: 1181 DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP-DGKLLASSSYGETIKLW 1239
Query: 587 D 587
D
Sbjct: 1240 D 1240
Score = 263 (97.6 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 64/256 (25%), Positives = 128/256 (50%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNP 391
+T H V + F DG + ++ SYD +K WD TG++++T +G + + +P
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLA-FSP 802
Query: 392 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR 451
D +L +G D I WD T E+ Q ++ H ++ ++ F + + ++SDD +++
Sbjct: 803 DG---KLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIK 859
Query: 452 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
+W+ + + + + H S+ S++ P+ LA+ SLD+ I +++ +L +
Sbjct: 860 IWDLATGELQQTL-DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG-ELQQS--LE 915
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 571
G +G+ V FSPDG+ + SG + W+ + ++ +TL+ H + P +
Sbjct: 916 GR--SGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP-DG 972
Query: 572 SKVATCGWDGLIKYWD 587
++A+ D IK W+
Sbjct: 973 KQLASSSSDTTIKLWN 988
Score = 246 (91.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 63/222 (28%), Positives = 116/222 (52%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L T GH++GV ++ F P G L+ S D +K+W+ +G+ +T G S V ++
Sbjct: 1078 LQRTLEGHSQGVRSVTFSPD-GKLLASNSYDGTIKLWNPL-TGELQQTLTGRSDWVDSVA 1135
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSD 405
F DG + + YD IK WD+ TG++++T + +I VV +PD +L +G D
Sbjct: 1136 FSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV-FSPDG---KLLASGSYD 1191
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ WD T E+ Q ++ H V ++ F + + +SS +++++W+ +++ ++
Sbjct: 1192 QTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLN 1251
Query: 466 EPHMHSMPSISLHPNTNWLAAQSL-DNQILIYSTRERFQLNK 506
+P S S++ P+ N LA+ + D +I +T E Q K
Sbjct: 1252 DPD-ESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALK 1292
Score = 242 (90.2 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 71/271 (26%), Positives = 128/271 (47%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L T+ GH + A+ F P HL+ S D +K+WD+ S + ++ HS++V ++
Sbjct: 994 LQQTFKGHDLWIRAVAFSPDGKHLV-SGSDDNTIKLWDLATS-ELQQSLEDHSRSVHAVA 1051
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSD 405
F D + ++S D IK WD+ TG++ RT G V V +PD +L + D
Sbjct: 1052 FSPDDKQLASSSLDSTIKLWDSATGELQRTLE-GHSQGVRSVTFSPDG---KLLASNSYD 1107
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
I W+ T E+ Q V+++ F + ++ + D ++++W+ +++ +
Sbjct: 1108 GTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTL- 1166
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIY--STRERFQLNKKKRFAGHIVAGYACQVN 523
E H + S+ P+ LA+ S D ++ +T E Q+ F GH + + V
Sbjct: 1167 EGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQI-----FEGH--SKWVESVA 1219
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 554
FSPDG+ + S WD + ++ +TL
Sbjct: 1220 FSPDGKLLASSSYGETIKLWDPVTGELLQTL 1250
Score = 180 (68.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 43/139 (30%), Positives = 72/139 (51%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L+ T GH+ + ++ F P G L+ S D K+WD +G+ ++ + GHSK V ++
Sbjct: 1162 LLQTLEGHSDRIQSVVFSPD-GKLLASGSYDQTAKLWDPA-TGELLQIFEGHSKWVESVA 1219
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSDK 406
F DG ++SY + IK WD TG++++T + + V +PD ++ + + D
Sbjct: 1220 FSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNR--LASVDIFDT 1277
Query: 407 KIVQWDMNTKEITQEYDQH 425
KI WD T E+ Q H
Sbjct: 1278 KI--WDPATGELLQALKGH 1294
Score = 45 (20.9 bits), Expect = 6.7e-25, Sum P(2) = 6.7e-25
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 64 QSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIDSF 120
QS+ ID + + Y L+ H D + Q H L VE+A DSF
Sbjct: 113 QSQEIDDA---IGQLKRYTSLFVAALQIDHVGFTDPVEQNFDLHDLKIVEEAIHDSF 166
Score = 44 (20.5 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 49 DDTTLALTVAQARQTQSRPIDPSQ--HVVAYNPTYEQL 84
DD T+ L + Q D S+ H VA++P +QL
Sbjct: 1022 DDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQL 1059
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 289 (106.8 bits), Expect = 8.7e-25, P = 8.7e-25
Identities = 73/261 (27%), Positives = 123/261 (47%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ + F P GHL+ S D V+IW G+ + H+ VR
Sbjct: 81 PQSRAYRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNIKGEST-VFRAHTATVR 138
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAG 402
+ FC+DG F+TAS DK IK W T + + + S I +V K +PD ++++
Sbjct: 139 SVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQ-HINWVRCAKFSPDG---RLIVSA 194
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
DK + WD ++E Y +H G V + F + + D +++VW+ +++
Sbjct: 195 SDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQ 254
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + H ++ ++S HP+ N+L S D+ + I E L GH G A V
Sbjct: 255 HY-QLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYT---LHGH--QGPATTV 308
Query: 523 NFSPDGRFVMSGDGEGKCWFW 543
FS G + SG + + W
Sbjct: 309 AFSRTGEYFASGGSDEQVMVW 329
Score = 199 (75.1 bits), Expect = 5.0e-13, P = 5.0e-13
Identities = 62/269 (23%), Positives = 114/269 (42%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH V+ + F L S MD+ + +W + + R + GH AV ++F
Sbjct: 46 FKGHRDAVTCVDFSFNMKQLA-SGSMDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPS 103
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S DK ++ W G+ T V ++ D Q+ + A DK I
Sbjct: 104 GHLLASGSRDKTVRIWVPNIKGE--STVFRAHTATVRSVHFCSDGQSFVTAS-DDKTIKV 160
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W + ++ QH+ V F + R V++SDDK++++W+ + E H
Sbjct: 161 WSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGG 219
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
+ + HP+ +AA +DN + ++ R L + + H A A ++F P G +
Sbjct: 220 FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNA--LSFHPSGNY 274
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+++ + D ++ TL H+G
Sbjct: 275 LVTASSDSTLKILDLMEGRLLYTLHGHQG 303
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 55/254 (21%), Positives = 106/254 (41%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 393
R + GH AV + F + + + S D + W + F TG V +N
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCVN-FS 101
Query: 394 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
++L +G DK + W N K + + H V ++ F + + FVT+SDDK+++VW
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ +S+ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 162 STHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCEH 217
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
G+ V+F P G V + + WD ++ ++ + + H +HP +
Sbjct: 218 --GGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGNY 274
Query: 574 VATCGWDGLIKYWD 587
+ T D +K D
Sbjct: 275 LVTASSDSTLKILD 288
Score = 175 (66.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 50/199 (25%), Positives = 82/199 (41%)
Query: 265 GRSWVAPPKDA--KAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVK 322
G+S+V D K + H ++ + + S H V +F P G LI+SA D VK
Sbjct: 146 GQSFVTASDDKTIKVWSTH---RQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVK 201
Query: 323 IWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 382
+WD S +C+ +Y H V + F GT A D +K WD T ++++ +
Sbjct: 202 LWDK-TSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHS 260
Query: 383 IPY-VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRF 441
+ +P N L+ SD + D+ + H G T+ F F
Sbjct: 261 AAVNALSFHPSG---NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 317
Query: 442 VTSSDDKSLRVWEFGIPVV 460
+ D+ + VW+ V+
Sbjct: 318 ASGGSDEQVMVWKSNFDVI 336
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 287 (106.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 84/309 (27%), Positives = 139/309 (44%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P + H GH V A RF G+ L+ G D +++W+ + G ++TY H + V
Sbjct: 6 LPTKEAHILKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNP-HRGILIKTYKSHGREV 63
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
RD+ +D KF + D+ + YWD TG+VIR F G++ VK N D ++ A
Sbjct: 64 RDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVN-AVKFN--DSSSVVVSA 120
Query: 402 GMSDKKIVQWDMNTKEI--TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
G D+ + WD + + Q D L V ++ + S D ++R ++ I
Sbjct: 121 GF-DRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVDGTVRTFDMRIG- 176
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDN--QILIYSTRERFQLNKKKRFAGHIVAG 517
+ +S+ + IS+ + N + A LD+ ++L +T E Q+ K GHI
Sbjct: 177 --REMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYK-----GHISKS 229
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
+ + V+ G +G +FWD KV + H+ V +HP E + T
Sbjct: 230 FKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCML-TS 288
Query: 578 GWDGLIKYW 586
DG I+ W
Sbjct: 289 SVDGTIRVW 297
Score = 173 (66.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 63/254 (24%), Positives = 113/254 (44%)
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQ 396
GH AV F DG LT D+ I+ W+ G +I+T+ S G+ V + D+ K
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAK- 74
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF- 455
G D+++ WD++T + +++ H G VN + F D++ V++ D+SLRVW+
Sbjct: 75 -FCSCG-GDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCR 132
Query: 456 GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 515
V I + + ++ S+ L T + S+D + F + + + ++
Sbjct: 133 SHSVEPVQIIDTFLDTVMSVVL-TKTEIIGG-SVDGTV------RTFDMRIGREMSDNLG 184
Query: 516 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 575
C ++ S DG V++G + D + ++ + K H + L S
Sbjct: 185 QPVNC-ISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCC-LTNSDAH 242
Query: 576 TCGW--DGLIKYWD 587
G DGL+ +WD
Sbjct: 243 VIGGSEDGLVFFWD 256
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 35/146 (23%), Positives = 68/146 (46%)
Query: 312 ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET 371
I+ +D V+ +D+ G+ M +G + V IS NDG L D ++ D T
Sbjct: 159 IIGGSVDGTVRTFDM-RIGREMSDNLG--QPVNCISISNDGNCVLAGCLDSTLRLLDRTT 215
Query: 372 GQVIRTFSTGKIPYVVKLN---PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
G++++ + G I K + + D ++ G D + WD+ ++ ++ H
Sbjct: 216 GELLQVYK-GHISKSFKTDCCLTNSDAH--VIGGSEDGLVFFWDLVDAKVLSKFRAHDLV 272
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWE 454
V ++++ +TSS D ++RVW+
Sbjct: 273 VTSVSYHPKEDCMLTSSVDGTIRVWK 298
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 286 (105.7 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 72/261 (27%), Positives = 123/261 (47%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ + F P GHL+ S D V+IW G+ + H+ VR
Sbjct: 12 PQSRAYRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVR 69
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAG 402
+ FC+DG F+TAS DK +K W T + + + S I +V K +PD ++++
Sbjct: 70 SVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDG---RLIVSA 125
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
DK + WD +++E Y +H G V + F + + D +++VW+ +++
Sbjct: 126 SDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 185
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + H ++ +S HP+ N+L S D+ + I E L GH G A V
Sbjct: 186 HY-QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHGH--QGPATTV 239
Query: 523 NFSPDGRFVMSGDGEGKCWFW 543
FS G + SG + + W
Sbjct: 240 AFSRTGEYFASGGSDEQVMVW 260
Score = 183 (69.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 54/244 (22%), Positives = 105/244 (43%)
Query: 317 MDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVI 375
MD+ + +W + + R + GH AV ++F G + S DK ++ W G+
Sbjct: 1 MDSCLMVWHMKPQSRAYR-FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE-- 57
Query: 376 RTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFV 435
T V ++ D Q+ + A DK + W + ++ QH+ V F
Sbjct: 58 STVFRAHTATVRSVHFCSDGQSFVTAS-DDKTVKVWATHRQKFLFSLSQHINWVRCAKFS 116
Query: 436 DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILI 495
+ R V++SDDK++++W+ + E H + + HP+ +AA +DN + +
Sbjct: 117 PDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKV 175
Query: 496 YSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ R +L + + V G ++F P G ++++ + D ++ TL
Sbjct: 176 WDVRTH-RLLQHYQLHSAAVNG----LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLH 230
Query: 556 CHEG 559
H+G
Sbjct: 231 GHQG 234
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/197 (24%), Positives = 81/197 (41%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G+S+V D K ++ + + S H V +F P G LI+SA D VK+W
Sbjct: 77 GQSFVTASDD-KTVKVWATHRQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLW 134
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
D +S +C+ +Y H V + F GT A D +K WD T ++++ +
Sbjct: 135 DK-SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 193
Query: 385 YV-VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVT 443
+ +P N L+ SD + D+ + H G T+ F F +
Sbjct: 194 VNGLSFHPSG---NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 250
Query: 444 SSDDKSLRVWEFGIPVV 460
D+ + VW+ +V
Sbjct: 251 GGSDEQVMVWKSNFDIV 267
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 41/191 (21%), Positives = 85/191 (44%)
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
++L +G DK + W N K + + H V ++ F + + FVT+SDDK+++VW
Sbjct: 36 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 95
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
+ +S+ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 96 RQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS---YCEH--G 149
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 576
G+ V+F P G + + + WD ++ ++ + + H G +HP + + T
Sbjct: 150 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNYLIT 208
Query: 577 CGWDGLIKYWD 587
D +K D
Sbjct: 209 ASSDSTLKILD 219
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 43/186 (23%), Positives = 78/186 (41%)
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI--K 462
D ++ W M + + H AV + F + + S DK++R+W +P V
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW---VPNVKGES 58
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST-RERFQLNKKKRFAGHIVAGYACQ 521
+ H ++ S+ + S D + +++T R++F + + HI +
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ----HI--NWVRC 112
Query: 522 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 581
FSPDGR ++S + WD S + + H G ++HP + +A G D
Sbjct: 113 AKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP-SGTCIAAAGMDN 171
Query: 582 LIKYWD 587
+K WD
Sbjct: 172 TVKVWD 177
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 282 (104.3 bits), Expect = 5.0e-24, P = 5.0e-24
Identities = 70/280 (25%), Positives = 122/280 (43%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH + F P+ G L+LS+G D ++ IW V+ + + GHS AV + F DG+
Sbjct: 53 GHEGEIFTAEFHPE-GELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGS 111
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 413
T S DK + +WD TGQ R F G +V + Q +L +G D+ I WD
Sbjct: 112 HIFTCSTDKTLAFWDIATGQRQRRFK-GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA 170
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K + V + F D + ++ D +++W+ V+ ++ H ++
Sbjct: 171 RKKHAAHTLESPF-QVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHL-RGHSDTIT 228
Query: 474 SISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHI--VAGYACQVNFSPDGRF 530
+SL P +++ ++DN + ++ R + K F GH + +SP
Sbjct: 229 GMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDK 288
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
+ SG + + WD + ++ L H G ++ P E
Sbjct: 289 ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKE 328
Score = 180 (68.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 61/259 (23%), Positives = 104/259 (40%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V SGH+ V F P H I + D + WD+ +G+ R + GH V +
Sbjct: 91 VMAMSGHSGAVMEAHFTPDGSH-IFTCSTDKTLAFWDIA-TGQRQRRFKGHGNFVNSVQG 148
Query: 349 CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
G + L + S D+ IK WD T + P+ V D +++G D +
Sbjct: 149 SRRGQQLLCSGSDDRTIKIWDARKKHAAHTLES---PFQVTAVCFGDTGEQVISGGIDNE 205
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV-----IK 462
+ WD+ + + H + ++ +T++ D +LRVW+ P +K
Sbjct: 206 VKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVR-PYAPGERCVK 264
Query: 463 YISEPHMHSMPSISLH----PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
+ + H H+ L P ++ + + S D + I+ R L K GH G
Sbjct: 265 -VFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYK---LPGH--NGS 318
Query: 519 ACQVNFSPDGRFVMSGDGE 537
V+FSP ++SG +
Sbjct: 319 VNAVDFSPKEPLILSGSSD 337
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 53/223 (23%), Positives = 96/223 (43%)
Query: 241 AGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVS 300
A G++ + F + +G+ + D + K HT + V+
Sbjct: 128 ATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ-VT 186
Query: 301 AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASY 360
A+ F G ++S G+D +VKIWD+ + GHS + +S +G LT +
Sbjct: 187 AV-CFGDTGEQVISGGIDNEVKIWDIRKQA-VLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 361 DKNIKYWDTET---GQ-VIRTFSTGKIPYVVKL-----NPDDDKQNILLAGMSDKKIVQW 411
D ++ WD G+ ++ F + + L +P DK + +G +D+ + W
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDK---ITSGSADRHVYIW 301
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
D+NT+ I + H G+VN + F ++ S DK+L + E
Sbjct: 302 DVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGE 344
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 281 (104.0 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 73/262 (27%), Positives = 123/262 (46%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ + F P GHL+ S D V+IW G+ + H+ VR
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVR 107
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TGKIPYV--VKLNPDDDKQNILLA 401
+ FC+DG +TAS DK +K W T + + FS T I +V K +PD ++++
Sbjct: 108 SVHFCSDGQLLVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDG---RLIVS 162
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK + WD ++E Y +H G V + F + + D +++VW+ ++
Sbjct: 163 ASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLV 222
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H ++ ++S HP+ N+L S D+ + I E L GH G A
Sbjct: 223 QHY-QLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHGH--QGPATT 276
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V FS G + SG + + W
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVW 298
Score = 212 (79.7 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 63/269 (23%), Positives = 115/269 (42%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH V+ + F HL S MD+ + IW + + R + GH AV ++F
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLA-SGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPS 72
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S DK ++ W G+ T V ++ D Q +L+ DK +
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQ-LLVTASDDKTVKV 129
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W + + QH+ V F + R V++SDDK++++W+ + E H
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGG 188
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
+ + HP+ +AA +DN + ++ TR + + + H A A ++F P G +
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLV---QHYQLHSAAVNA--LSFHPSGNY 243
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+++ + D ++ TL H+G
Sbjct: 244 LITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 178 (67.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 45/176 (25%), Positives = 73/176 (41%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
+R + + + H V +F P G LI+SA D VK+WD S +C+ +Y H V
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDK-TSRECVHSYCEHGGFVTY 192
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F GT A D +K WDT T ++++ + + +P N L+ S
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSG---NYLITASS 249
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
D + D+ + H G T+ F F + D+ + VW+ V
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDTV 305
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 52/254 (20%), Positives = 104/254 (40%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 393
R + GH AV + F + + S D + W + F TG V +N
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCVN-FS 70
Query: 394 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
++L +G DK + W N K + + H V ++ F + + VT+SDDK+++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ +++ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCEH 186
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 187 --GGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHP-SGNY 243
Query: 574 VATCGWDGLIKYWD 587
+ T D +K D
Sbjct: 244 LITASSDSTLKILD 257
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 281 (104.0 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 73/282 (25%), Positives = 131/282 (46%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V +F P G + S+G D + +W+V+ + T GHS AV ++ + DG
Sbjct: 53 SGHEGEVYCCKFHPN-GATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +AS DK + WD+ETG+ ++ G +V P + G D + WD
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLK-GHTSFVNSCFPARRGPQLACTGSDDGTVKLWD 170
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
+ K + Q+ V ++TF D + + ++ D ++VW+ +I Y + H S+
Sbjct: 171 IRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLI-YSMQGHGDSV 228
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK--KRFAG--HIVAGYACQVNFSPDG 528
+SL + ++L + S+DN + ++ R F ++ K F G H + ++S DG
Sbjct: 229 TGLSLSADGSYLLSNSMDNSVRVWDIRP-FAPKERCVKIFQGNVHNFEKNLLRCSWSADG 287
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
+ +G + + WD + ++ L H G +HP E
Sbjct: 288 SKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEE 329
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 64/260 (24%), Positives = 109/260 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GH+ V + + G L+ SA D V +WD +G+ ++ GH+ V
Sbjct: 94 TLKGHSGAVMELHYNTD-GSLLFSASTDKTVCVWDS-ETGERVKRLKGHTSFVNSCFPAR 151
Query: 351 DGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
G + T S D +K WD + TF V N D+ +++G D I
Sbjct: 152 RGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQ---IISGGIDNDIK 208
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY----IS 465
WD+ ++ H +V ++ + +++S D S+RVW+ P K I
Sbjct: 209 VWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIR-PFAPKERCVKIF 267
Query: 466 EPHMHSMPS----ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
+ ++H+ S + + +AA S D + I+ T R + K GH AG +
Sbjct: 268 QGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYK---LPGH--AGSVNE 322
Query: 522 VNFSPDGRFVMSGDGEGKCW 541
V F P+ V+SG + + +
Sbjct: 323 VAFHPEEPIVLSGSSDKRLY 342
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K VHT+ +T V ++ F +I S G+D +K+WD+ K + + GH +V
Sbjct: 174 KASVHTFQ-NTYQVLSVTFNDTSDQII-SGGIDNDIKVWDL-RQNKLIYSMQGHGDSVTG 230
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFSTGKI----PYVVKLNPDDDKQN 397
+S DG+ L+ S D +++ WD + ++ F G + +++ + D
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQ-GNVHNFEKNLLRCSWSADGSK 289
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
I AG +D+ + WD T+ I + H G+VN + F ++ S DK L + E
Sbjct: 290 IA-AGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGE 345
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 289 (106.8 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 72/261 (27%), Positives = 123/261 (47%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ + F P GHL+ S D V+IW G+ + H+ VR
Sbjct: 50 PQTRAYRFAGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVR 107
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAG 402
+ FC+DG F+TAS DK +K W T + + + S I +V K +PD ++++
Sbjct: 108 SVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCAKFSPDG---RLIVSA 163
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
DK + WD ++E Y +H G V + F + + D +++VW+ +++
Sbjct: 164 SDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + H ++ ++S HP+ N+L S D+ + I E L GH G A V
Sbjct: 224 HY-QLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYT---LHGH--QGPATTV 277
Query: 523 NFSPDGRFVMSGDGEGKCWFW 543
FS G + SG + + W
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW 298
Score = 207 (77.9 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 64/280 (22%), Positives = 118/280 (42%)
Query: 281 HCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS 340
HC L + GH V+++ F L S MD+ + +W + + R + GH
Sbjct: 4 HCPEDPSLERHFKGHRDAVTSVDFSLNTKQLA-SGSMDSCLMVWHMKPQTRAYR-FAGHK 61
Query: 341 KAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNIL 399
AV ++F G + S DK ++ W G+ T V ++ D Q+ +
Sbjct: 62 DAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQSFV 119
Query: 400 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
A DK + W + ++ QH+ V F + R V++SDDK++++W+
Sbjct: 120 TAS-DDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
+ E H + + HP+ +AA +DN + ++ R L + + H A A
Sbjct: 179 CVHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLL---QHYQLHSAAVNA 234
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
++F P G ++++ + D ++ TL H+G
Sbjct: 235 --LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 178 (67.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 53/255 (20%), Positives = 106/255 (41%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPD 392
R + GH AV + F + + + S D + W + F+ K V +P
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
++L +G DK + W N K + + H V ++ F + + FVT+SDDK+++V
Sbjct: 73 G---HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV 129
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + +S+ H++ + P+ + + S D + ++ R ++ +
Sbjct: 130 WSTHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCE 185
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 572
H G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 186 H--GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGN 242
Query: 573 KVATCGWDGLIKYWD 587
+ T D +K D
Sbjct: 243 YLVTASSDSTLKILD 257
Score = 177 (67.4 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 50/199 (25%), Positives = 82/199 (41%)
Query: 265 GRSWVAPPKD--AKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVK 322
G+S+V D K + H ++ + + S H V +F P G LI+SA D VK
Sbjct: 115 GQSFVTASDDKTVKVWSTH---RQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVK 170
Query: 323 IWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 382
+WD S +C+ +Y H V + F GT A D +K WD T ++++ +
Sbjct: 171 LWDK-TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 383 IPY-VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRF 441
+ +P N L+ SD + D+ + H G T+ F F
Sbjct: 230 AAVNALSFHPSG---NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYF 286
Query: 442 VTSSDDKSLRVWEFGIPVV 460
+ D+ + VW+ +V
Sbjct: 287 ASGGSDEQVMVWKSNFDIV 305
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 275 (101.9 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 75/317 (23%), Positives = 148/317 (46%)
Query: 277 AANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTY 336
+ N Y P R + T GHT +S ++F G+L+ SA +D + +W N R Y
Sbjct: 24 SGNVPIYKPYRHLKTLEGHTAAISCVKF-SNDGNLLASASVDKTMILWSATNYSLIHR-Y 81
Query: 337 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDD 394
GHS + D+++ +D +AS D ++ WD + G +V V NP
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS- 140
Query: 395 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
N++++G D+ I W++ T + + H ++++ F + V++S D S ++W+
Sbjct: 141 --NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Query: 455 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILI--YSTRERFQLNKKKRFAG 512
+K + + ++ PN ++ +LD+ + + Y+T +F K + G
Sbjct: 199 AKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATG-KFL----KVYTG 253
Query: 513 HIVAGYACQVNFS-PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 571
H + FS +G++++SG + + WD ++ + + L+ H I HP+ Q
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPV-Q 312
Query: 572 SKVATCG--WDGLIKYW 586
+++++ G D I+ W
Sbjct: 313 NEISSSGNHLDKTIRIW 329
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 44/173 (25%), Positives = 82/173 (47%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGH-SKAVRD 345
+ V H+ +S++ F + G LI+SA D KIWD G C++T + S AV
Sbjct: 161 KCVRMIKAHSMPISSVHF-NRDGSLIVSASHDGSCKIWDA-KEGTCLKTLIDDKSPAVSF 218
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGM 403
F +G L A+ D +K + TG+ ++ ++ T K+ + + +++G
Sbjct: 219 AKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKV-FCITSAFSVTNGKYIVSGS 277
Query: 404 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD--DKSLRVWE 454
D + WD+ + I Q + H AV +++ +S + DK++R+W+
Sbjct: 278 EDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIWK 330
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/164 (22%), Positives = 74/164 (45%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEF-GIPVVIKYISEPHMHSMPSISLHPNTNW 483
H A++ + F ++ ++S DK++ +W ++ +Y E H + ++ ++++
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY--EGHSSGISDLAWSSDSHY 99
Query: 484 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 543
+ S D + I+ R ++ K R GH + VNF+P ++SG + W
Sbjct: 100 TCSASDDCTLRIWDARSPYECLKVLR--GH--TNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 544 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ K+ K R +K H + I + S + + DG K WD
Sbjct: 156 EVKTGKCVRMIKAHS-MPISSVHFNRDGSLIVSASHDGSCKIWD 198
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 275 (101.9 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 71/266 (26%), Positives = 123/266 (46%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V +F P G + SAG D + +W V+ T GHS AV ++ + DG
Sbjct: 64 SGHEGEVYCCKFHPN-GSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDG 122
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +AS DK + WD+ETG+ ++ G +V P ++ G D + WD
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLK-GHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
+ K Q + Q+ V +TF D + + ++ D ++VW+ + Y H S+
Sbjct: 182 IRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSV 239
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK--KRFAG--HIVAGYACQVNFSPDG 528
+SL ++L + ++DN + ++ R F ++ K F G H + ++SPDG
Sbjct: 240 TGLSLSSEGSYLLSNAMDNTVRVWDVRP-FAPKERCVKIFQGNVHNFEKNLLRCSWSPDG 298
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTL 554
+ +G + + + W S V R+L
Sbjct: 299 SKIAAGSADS--FLYPWHSLSV-RSL 321
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 286 (105.7 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 72/261 (27%), Positives = 123/261 (47%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ + F P GHL+ S D V+IW G+ + H+ VR
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVR 107
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAG 402
+ FC+DG F+TAS DK +K W T + + + S I +V K +PD ++++
Sbjct: 108 SVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HINWVRCAKFSPDG---RLIVSA 163
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
DK + WD +++E Y +H G V + F + + D +++VW+ +++
Sbjct: 164 SDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQ 223
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + H ++ +S HP+ N+L S D+ + I E L GH G A V
Sbjct: 224 HY-QLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHGH--QGPATTV 277
Query: 523 NFSPDGRFVMSGDGEGKCWFW 543
FS G + SG + + W
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW 298
Score = 198 (74.8 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 62/279 (22%), Positives = 116/279 (41%)
Query: 282 CYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSK 341
C L + GH V+ + F L S MD+ + +W + + R + GH
Sbjct: 5 CAEDPSLERHFKGHRDAVTCVDFSINTKQLA-SGSMDSCLMVWHMKPQSRAYR-FTGHKD 62
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILL 400
AV ++F G + S DK ++ W G+ T V ++ D Q+ +
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQSFVT 120
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
A DK + W + ++ QH+ V F + R V++SDDK++++W+
Sbjct: 121 AS-DDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 179
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+ E H + + HP+ +AA +DN + ++ R +L + + V G
Sbjct: 180 VHSYCE-HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH-RLLQHYQLHSAAVNG--- 234
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
++F P G ++++ + D ++ TL H+G
Sbjct: 235 -LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 182 (69.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 55/254 (21%), Positives = 107/254 (42%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 393
R + GH AV + F + + + S D + W + F TG V +N
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRF-TGHKDAVTCVN-FS 70
Query: 394 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
++L +G DK + W N K + + H V ++ F + + FVT+SDDK+++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ +S+ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 131 ATHRQKFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHS---YCEH 186
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
G+ V+F P G + + + WD ++ ++ + + H G +HP +
Sbjct: 187 --GGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHP-SGNY 243
Query: 574 VATCGWDGLIKYWD 587
+ T D +K D
Sbjct: 244 LITASSDSTLKILD 257
Score = 176 (67.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 49/197 (24%), Positives = 81/197 (41%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G+S+V D K ++ + + S H V +F P G LI+SA D VK+W
Sbjct: 115 GQSFVTASDD-KTVKVWATHRQKFLFSLSQHINWVRCAKFSPD-GRLIVSASDDKTVKLW 172
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
D +S +C+ +Y H V + F GT A D +K WD T ++++ +
Sbjct: 173 DK-SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAA 231
Query: 385 YV-VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVT 443
+ +P N L+ SD + D+ + H G T+ F F +
Sbjct: 232 VNGLSFHPSG---NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFAS 288
Query: 444 SSDDKSLRVWEFGIPVV 460
D+ + VW+ +V
Sbjct: 289 GGSDEQVMVWKSNFDIV 305
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 283 (104.7 bits), Expect = 8.6e-23, P = 8.6e-23
Identities = 71/261 (27%), Positives = 123/261 (47%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ + F P GHL+ S D V+IW G+ + H+ VR
Sbjct: 50 PQSRAYRFAGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWIPNVKGEST-VFRAHTATVR 107
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAG 402
+ FC+DG +TAS DK +K W T + + + S I +V + +PD ++++
Sbjct: 108 SVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQ-HINWVRCARFSPDG---RLIVSA 163
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
DK + WD ++E Y +H G V + F + +S D +++VW+ +++
Sbjct: 164 SDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQ 223
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + H ++ ++S HP+ N+L S D+ + I E L GH G A V
Sbjct: 224 HY-QLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYT---LHGH--QGPATTV 277
Query: 523 NFSPDGRFVMSGDGEGKCWFW 543
FS G + SG + + W
Sbjct: 278 AFSRTGEYFASGGSDEQVMVW 298
Score = 207 (77.9 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 61/269 (22%), Positives = 117/269 (43%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH ++++ F L S MD+ + +W + + R + GH AV ++F
Sbjct: 15 FKGHRDAITSVDFSLNTKQLA-SGSMDSCLMVWHMKPQSRAYR-FAGHKDAVTCVNFSPS 72
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S DK ++ W G+ T V ++ D Q+++ A DK +
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGE--STVFRAHTATVRSVHFCSDGQSLVTAS-DDKTVKV 129
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W + ++ QH+ V F + R V++SDDK++++W+ + E H
Sbjct: 130 WSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCE-HGG 188
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
+ + HP+ +AA S+DN + ++ R L + + H A A ++F P G +
Sbjct: 189 FVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLL---QHYQLHSAAVNA--LSFHPSGNY 243
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+++ + D ++ TL H+G
Sbjct: 244 LLTASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 187 (70.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 51/190 (26%), Positives = 79/190 (41%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++ + + S H V RF P G LI+SA D VK+WD S +C+ +Y H V
Sbjct: 135 QKFLFSLSQHINWVRCARFSPD-GRLIVSASDDKTVKLWDK-TSRECVHSYCEHGGFVTY 192
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F GT AS D +K WD T ++++ + + +P N LL S
Sbjct: 193 VDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSG---NYLLTASS 249
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI 464
D + D+ + H G T+ F F + D+ + VW+ VV Y
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVV-DYR 308
Query: 465 SEPHMHSMPS 474
+H P+
Sbjct: 309 EVIKVHRPPA 318
Score = 171 (65.3 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 51/255 (20%), Positives = 105/255 (41%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPD 392
R + GH A+ + F + + + S D + W + F+ K V +P
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
++L +G DK + W N K + + H V ++ F + + VT+SDDK+++V
Sbjct: 73 G---HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV 129
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + +S+ H++ + P+ + + S D + ++ R ++ +
Sbjct: 130 WSTHRQKFLFSLSQ-HINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHS---YCE 185
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 572
H G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 186 H--GGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHP-SGN 242
Query: 573 KVATCGWDGLIKYWD 587
+ T D +K D
Sbjct: 243 YLLTASSDSTLKILD 257
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 281 (104.0 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 73/262 (27%), Positives = 123/262 (46%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ + F P GHL+ S D V+IW G+ + H+ VR
Sbjct: 50 PQSRAYRFTGHKDAVTCVNFSPS-GHLLASGSRDKTVRIWVPNVKGEST-VFRAHTATVR 107
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TGKIPYV--VKLNPDDDKQNILLA 401
+ FC+DG +TAS DK +K W T + + FS T I +V K +PD ++++
Sbjct: 108 SVHFCSDGQSLVTASDDKTVKVWSTHRQRFL--FSLTQHINWVRCAKFSPDG---RLIVS 162
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK + WD ++E Y +H G V + F + + D +++VW+ ++
Sbjct: 163 ASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLL 222
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H ++ ++S HP+ N+L S D+ + I E L GH G A
Sbjct: 223 QHY-QLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYT---LHGH--QGPATT 276
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V FS G + SG + + W
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVW 298
Score = 212 (79.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 64/269 (23%), Positives = 115/269 (42%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH V+ + F HL S MD+ + IW + + R + GH AV ++F
Sbjct: 15 FKGHRDAVTCVDFSLNTKHLA-SGSMDSTLMIWHMKPQSRAYR-FTGHKDAVTCVNFSPS 72
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S DK ++ W G+ T V ++ D Q+++ A DK +
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGE--STVFRAHTATVRSVHFCSDGQSLVTAS-DDKTVKV 129
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W + + QH+ V F + R V++SDDK++++W+ I E H
Sbjct: 130 WSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE-HGG 188
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
+ + HP+ +AA +DN + ++ R L + + H A A ++F P G +
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLL---QHYQLHSAAVNA--LSFHPSGNY 243
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+++ + D ++ TL H+G
Sbjct: 244 LITASSDSTLKILDLMEGRLLYTLHGHQG 272
Score = 175 (66.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 44/176 (25%), Positives = 73/176 (41%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
+R + + + H V +F P G LI+SA D VK+WD S +C+ +Y H V
Sbjct: 135 QRFLFSLTQHINWVRCAKFSPD-GRLIVSASDDKTVKLWDK-TSRECIHSYCEHGGFVTY 192
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F GT A D +K WD T ++++ + + +P N L+ S
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSG---NYLITASS 249
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
D + D+ + H G T+ F F + D+ + VW+ +V
Sbjct: 250 DSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIV 305
Score = 169 (64.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 52/254 (20%), Positives = 104/254 (40%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 393
R + GH AV + F + + S D + W + F TG V +N
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRF-TGHKDAVTCVN-FS 70
Query: 394 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
++L +G DK + W N K + + H V ++ F + + VT+SDDK+++VW
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ +++ H++ + P+ + + S D + ++ R ++ + H
Sbjct: 131 STHRQRFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHS---YCEH 186
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
G+ V+F P G + + + WD ++ ++ + + H +HP +
Sbjct: 187 --GGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHP-SGNY 243
Query: 574 VATCGWDGLIKYWD 587
+ T D +K D
Sbjct: 244 LITASSDSTLKILD 257
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 285 (105.4 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 88/307 (28%), Positives = 138/307 (44%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V ++ F P + D +KIWDV +G T GH + VR ++ N T
Sbjct: 174 GHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVA-TGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAGMSDKKIVQW 411
+A DK +K WD E +VIR++ G + Y + L+P D +LL G D W
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYH-GHLSGVYCLALHPTLD---VLLTGGRDSVCRVW 287
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ TK H V ++ + + VT S D +++ W+ + ++ H S
Sbjct: 288 DIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTH-HKKS 346
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN---FSPDG 528
+ +++LHP N A+ S DN ++F L K + F ++++ +N + DG
Sbjct: 347 VRAMTLHPKENAFASASADNT-------KKFSLPKGE-FCHNMLSQQKTIINAMAVNEDG 398
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFR---------TLKCHEGVCIGCEWHPLEQSKVATCGW 579
V GD G WFWDWKS F+ +L+ G+ C + S++ TC
Sbjct: 399 VMVTGGDN-GSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAAC--YDNTGSRLVTCEA 455
Query: 580 DGLIKYW 586
D IK W
Sbjct: 456 DKTIKMW 462
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 47/169 (27%), Positives = 71/169 (42%)
Query: 331 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 390
K R GH VR ++F F T S D+ IK WD TG V++ TG I V L
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG-VLKLTLTGHIEQVRGLA 225
Query: 391 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
+ + AG DK++ WD+ ++ + Y HL V + +T D
Sbjct: 226 VSNRHTYMFSAG-DDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW+ + I +S H +++ S+ P + S D I + R
Sbjct: 285 RVWDIRTKMQIFALSG-HDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR 332
Score = 146 (56.5 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 47/216 (21%), Positives = 93/216 (43%)
Query: 377 TFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT-QEY---DQHLGAVNTI 432
T S+GK ++ N ++N+ A + ++ +W + Y HLG V ++
Sbjct: 123 TGSSGKSTTIIPANVSSYQRNLSTAALMERIPSRWPRPEWHAPWKNYRVIQGHLGWVRSV 182
Query: 433 TFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQ 492
F +N F T S D+++++W+ V +K H+ + +++ ++ + D Q
Sbjct: 183 AFDPSNEWFCTGSADRTIKIWDVATGV-LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQ 241
Query: 493 ILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVF 551
+ + + NK R + GH+ +G C + P +++G + C WD ++
Sbjct: 242 VKCWDLEQ----NKVIRSYHGHL-SGVYC-LALHPTLDVLLTGGRDSVCRVWDIRTKMQI 295
Query: 552 RTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
L H+ P + +V T D IK+WD
Sbjct: 296 FALSGHDNTVCSVFTRPTDP-QVVTGSHDTTIKFWD 330
Score = 128 (50.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/171 (21%), Positives = 75/171 (43%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ ++ GH GV + P ++L+ G D+ ++WD+ + GH V +
Sbjct: 251 KVIRSYHGHLSGVYCLALHPTLD-VLLTGGRDSVCRVWDIRTKMQIF-ALSGHDNTVCSV 308
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSD 405
+ +T S+D IK+WD G+ + T + K + L+P K+N + +D
Sbjct: 309 FTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHP---KENAFASASAD 365
Query: 406 KKIVQWDMNTKEITQEY-DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF 455
++ + E Q +N + V+ + VT D+ S+ W++
Sbjct: 366 NT-KKFSLPKGEFCHNMLSQQKTIINAMA-VNEDGVMVTGGDNGSIWFWDW 414
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 261 (96.9 bits), Expect = 9.9e-22, P = 9.9e-22
Identities = 77/279 (27%), Positives = 127/279 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + GH V ++F P GHL+ S D V +W G+ + H+ VR
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSPS-GHLVASGSRDKTVCLWVPSVKGEST-VFKAHTATVR 108
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAG 402
+ F +DG +TAS DK IK W + + + S I +V + +PD L+A
Sbjct: 109 SVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQ-HINWVRCARFSPDGR----LIAS 163
Query: 403 MSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
SD K V+ WD ++E + +H G N + F + + DK+++VW+ + ++
Sbjct: 164 ASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLL 223
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H ++ S+S HP+ N+L S D+ + I E L GH G A
Sbjct: 224 QHY-QVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYT---LHGH--QGPATC 277
Query: 522 VNFSPDGRFVMSGDGEGKCWFW--DWKSCKVFRTLKCHE 558
V FS G F SG + + W ++ + LK H+
Sbjct: 278 VAFSRTGDFFASGGSDEQVMVWKTNFSAADYDGVLKTHK 316
Score = 189 (71.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 64/274 (23%), Positives = 114/274 (41%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTY--MGHSKAVRDISFCND 351
GH ++++ F L S MD+ +KIW + MR Y +GH AV + F
Sbjct: 18 GHRDAITSVDFSLNKKQLA-SGSMDSCLKIWSMKPQ---MRAYCLVGHKDAVMCVQFSPS 73
Query: 352 GTKFLTASYDKNIKYW-DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S DK + W + G+ T V ++ D Q+++ A DK I
Sbjct: 74 GHLVASGSRDKTVCLWVPSVKGE--STVFKAHTATVRSVHFSSDGQSLVTAS-DDKTIKV 130
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W ++ ++ QH+ V F + R ++SDDK++++W+ I E H
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCE-HGG 189
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
+ HP+ +AA D + ++ R L + + H A ++F P G +
Sbjct: 190 FANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLL---QHYQVHTAA--VNSLSFHPSGNY 244
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEG--VCI 562
+++ + D ++ TL H+G C+
Sbjct: 245 LITASNDSTLKILDLLEGRLLYTLHGHQGPATCV 278
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 54/256 (21%), Positives = 108/256 (42%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNP 391
R + GH A+ + F + + + S D +K W + Q+ G V V+ +P
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKP-QMRAYCLVGHKDAVMCVQFSP 72
Query: 392 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR 451
+++ +G DK + W + K + + H V ++ F + + VT+SDDK+++
Sbjct: 73 SG---HLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIK 129
Query: 452 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
VW + +S+ H++ + P+ +A+ S D + ++ R ++ F
Sbjct: 130 VWTVHRQKFLFSLSQ-HINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHS---FC 185
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 571
H G+A V F P G + + + WD + ++ + + H +HP
Sbjct: 186 EH--GGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHP-SG 242
Query: 572 SKVATCGWDGLIKYWD 587
+ + T D +K D
Sbjct: 243 NYLITASNDSTLKILD 258
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 260 (96.6 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 72/298 (24%), Positives = 126/298 (42%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT GH V AI F YG I + D K+W +GKC T+ GH+ + +SF
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSA-ETGKCYHTFRGHTAEIVCLSF 185
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
T T S D K WD ++G+ + T TG + ++ L+ D I+ G D +
Sbjct: 186 NPQSTVVATGSMDTTAKLWDIQSGEEVVTL-TGHLAEIISLSFDTSGDRII-TGSFDHTV 243
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
V WD +T H +++ F + +T S DK+ +W+ + ++ H
Sbjct: 244 VVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTG-H 302
Query: 469 MHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG 528
+ +A S D +Y+ R + K + GH G +++F+P G
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLE---GH--EGEISKISFNPQG 357
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
+++G + WD ++ + + L+ H C ++ + + V T D + W
Sbjct: 358 NRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNSCRIW 414
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 64/282 (22%), Positives = 117/282 (41%)
Query: 307 KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIK 365
K G ++ D K+WD SG+ + T GH V I+F N G K T S+DK K
Sbjct: 102 KAGSCFITGSYDRTCKVWDTA-SGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
Query: 366 YWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH 425
W ETG+ TF G +V L+ + + ++ G D WD+ + E H
Sbjct: 161 LWSAETGKCYHTFR-GHTAEIVCLS-FNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGH 218
Query: 426 LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA 485
L + +++F + R +T S D ++ VW+ + + H + S + + +
Sbjct: 219 LAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIG-HCAEISSALFSWDCSLIL 277
Query: 486 AQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 545
S+D +++ + I+ +C F G+ + + +G ++
Sbjct: 278 TGSMDKTCMLWDATSGKCVATLTGHDDEILD--SC---FDYTGKLIATASADGTARVYNA 332
Query: 546 KSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ K L+ HEG ++P + +++ T D + WD
Sbjct: 333 TTRKCITKLEGHEGEISKISFNP-QGNRLLTGSSDKTARIWD 373
Score = 191 (72.3 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 53/169 (31%), Positives = 74/169 (43%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R VHT GH +S+ F LIL+ MD +WD SGKC+ T GH + D
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCS-LILTGSMDKTCMLWDA-TSGKCVATLTGHDDEILDS 309
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F G TAS D + ++ T + I G+I + NP ++ LL G S
Sbjct: 310 CFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKI-SFNPQGNR---LLTGSS 365
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
DK WD+ T + Q + H + + F +T S D S R+W
Sbjct: 366 DKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 174 (66.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 54/255 (21%), Positives = 108/255 (42%)
Query: 339 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLN-PDDDKQ 396
H + +++ G+ F+T SYD+ K WDT +G+ + T + + Y + N P DK
Sbjct: 91 HILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK- 149
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
+ G DK W T + + H + ++F + T S D + ++W+
Sbjct: 150 --IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
+ ++ H+ + S+S + + + S D+ ++++ +K H +
Sbjct: 208 SGEEVVTLTG-HLAEIISLSFDTSGDRIITGSFDHTVVVWDA----STGRKV----HTLI 258
Query: 517 GYACQVN---FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI-GCEWHPLEQS 572
G+ +++ FS D +++G + C WD S K TL H+ + C
Sbjct: 259 GHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSC--FDYTGK 316
Query: 573 KVATCGWDGLIKYWD 587
+AT DG + ++
Sbjct: 317 LIATASADGTARVYN 331
Score = 118 (46.6 bits), Expect = 0.00070, P = 0.00070
Identities = 28/106 (26%), Positives = 49/106 (46%)
Query: 262 DYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKV 321
DY G+ D A + ++ + GH +S I F P+ G+ +L+ D
Sbjct: 312 DYTGKLIATASADG-TARVYNATTRKCITKLEGHEGEISKISFNPQ-GNRLLTGSSDKTA 369
Query: 322 KIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYW 367
+IWDV +G+C++ GH+ + +F G +T S D + + W
Sbjct: 370 RIWDV-QTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 259 (96.2 bits), Expect = 8.5e-20, P = 8.5e-20
Identities = 65/219 (29%), Positives = 108/219 (49%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH VS++ F P G +LSA D +K WD+ ++G C+ T+ GH+ VR I NDGT
Sbjct: 189 GHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDI-STGYCVYTFRGHNDWVRMIRISNDGT 246
Query: 354 KFLTASYDKNIKYWD--TETGQ-VIRTFSTGK-----IPYVVKLN-----PDDDKQNILL 400
F +AS D+ + W T++ + V+R P N P+ + +IL
Sbjct: 247 LFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILF 306
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D+ I W++NT ++ H V + F + ++ +DDK+LRVWE
Sbjct: 307 SGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRC 366
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
+K I E H H + +++ H + ++ S+D ++ R
Sbjct: 367 MKAI-EAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 224 (83.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 80/333 (24%), Positives = 143/333 (42%)
Query: 270 APPKDAKAANDHCYIPKRL-VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFN 328
AP +D + A D +IP+ +GH ++ + F P + ++ S D +K+WD +
Sbjct: 81 APTRDKRQAAD--WIPRPPETQKLTGHRLPITRVIFHPLWT-IMASCSEDATIKVWD-YE 136
Query: 329 SGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT-ETGQVIRTFSTGK--IPY 385
+G+ RT GH+ AV DI+ G + ++ S D +IK WD +T +++ + +
Sbjct: 137 TGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSS 196
Query: 386 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSS 445
V L P D +L+ D I QWD++T + H V I ++ F ++S
Sbjct: 197 VTFL-PTGD---FVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASAS 252
Query: 446 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT---NWLAAQSLDNQ--ILIYSTRE 500
D+++ VW F K + H H++ + P+T N Q N IL +R+
Sbjct: 253 LDQTVTVWSFATKSA-KLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRD 311
Query: 501 RFQLNKKKRFAGHIVAGYACQVN------FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 554
R + G ++ N F P G++++S + W+ + + + +
Sbjct: 312 R-SIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAI 370
Query: 555 KCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ HE +H V T D K W+
Sbjct: 371 EAHEHFVSTVAFHQTSPF-VITGSVDMSCKVWE 402
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 261 (96.9 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 81/289 (28%), Positives = 131/289 (45%)
Query: 257 GKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAG 316
GKEE + W+ D AN H + P + GH V ++ + L+ SA
Sbjct: 268 GKEEPN-----WIETKPDV--AN-H-WSP--CLQALEGHEAAVLSVSYSHD-SRLLASAS 315
Query: 317 MDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIR 376
D VKIWD +G T GHS VR + F +D ++ L ++ D +K WDT TG +
Sbjct: 316 DDRTVKIWDT-ETGSLQHTLEGHSDLVRSVIFSHD-SRLLASASDSTVKIWDTGTGSLQH 373
Query: 377 TFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFV 435
T G +V + D Q LLA SD V+ WD T + + H V ++ F
Sbjct: 374 TLE-GHRDWVRSVIFSHDSQ--LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 430
Query: 436 DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILI 495
+++ ++SDD ++++W+ G +++ E H + S+ ++ LA+ S D + I
Sbjct: 431 HDSQLLASASDDSTVKIWDTGTGS-LQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRI 489
Query: 496 YSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ T + + K GH + V+FS D R + S + WD
Sbjct: 490 WDTEKG---SHKHTLEGH--SSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Score = 244 (91.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 65/215 (30%), Positives = 103/215 (47%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L HT GH+ V ++ F + +L++ D+ VKIWD +G T GH VR +
Sbjct: 330 LQHTLEGHSDLVRSVIF--SHDSRLLASASDSTVKIWDT-GTGSLQHTLEGHRDWVRSVI 386
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
F +D +AS D +K WDT TG + T G +V + D Q LLA SD
Sbjct: 387 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLE-GHRDWVRSVIFSHDSQ--LLASASDDS 443
Query: 408 IVQ-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE 466
V+ WD T + + H V ++ F ++R ++SDD+++R+W+ K+ E
Sbjct: 444 TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTE-KGSHKHTLE 502
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 501
H + S+S ++ LA+ S D + I+ R
Sbjct: 503 GHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEAR 537
Score = 230 (86.0 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 66/264 (25%), Positives = 117/264 (44%)
Query: 325 DVFNS-GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI 383
DV N C++ GH AV +S+ +D +AS D+ +K WDTETG + T G
Sbjct: 280 DVANHWSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLE-GHS 338
Query: 384 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVT 443
V + D + LLA SD + WD T + + H V ++ F +++ +
Sbjct: 339 DLVRSVIFSHDSR--LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLAS 396
Query: 444 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+SDD ++++W+ G +++ E H + S+ ++ LA+ S D+ + I+ T
Sbjct: 397 ASDDSTVKIWDTGTGS-LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG-- 453
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIG 563
+ + GH + V FS D R + S + WD + TL+ H +
Sbjct: 454 -SLQHTLEGH--RDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTS 510
Query: 564 CEWHPLEQSKVATCGWDGLIKYWD 587
+ + +A+ D ++ WD
Sbjct: 511 VSFSH-DSRLLASASNDQTVRIWD 533
Score = 172 (65.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 44/137 (32%), Positives = 65/137 (47%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L HT GH V ++ F L+ SA D+ VKIWD +G T GH VR +
Sbjct: 413 LQHTLEGHRDWVRSV-IFSHDSQLLASASDDSTVKIWDT-GTGSLQHTLEGHRDWVRSVI 470
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
F +D +AS D+ ++ WDTE G T G V ++ D + LLA S+ +
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSHKHTLE-GHSSLVTSVSFSHDSR--LLASASNDQ 527
Query: 408 IVQ-WDMNTKEITQEYD 423
V+ WD+ + + +D
Sbjct: 528 TVRIWDIEARSLQHTFD 544
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 242 (90.2 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 63/271 (23%), Positives = 121/271 (44%)
Query: 305 FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNI 364
F G + SAG D ++ +W+VF + GH A+ ++ F D + ++A DK +
Sbjct: 44 FSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTV 103
Query: 365 KYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ 424
+ WD ETG IR F + V ++ + ++ + D ++ DM +KE +++
Sbjct: 104 RVWDMETGSCIRNFKS-HTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFIC 162
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
+TF D + D ++VW+ + ++Y+ H ++ S+S+ N N+L
Sbjct: 163 KYQQT-AVTFNDAADNVICGGIDNQIKVWDM-LRNDVRYVLSGHRDTITSLSVSHNGNFL 220
Query: 485 AAQSLDNQILIYSTRERFQLNKK-KRFAG--HIVAGYACQVNFSPDGRFVMSGDGEGKCW 541
+ S+D ++ + R + R+ G H + +SP ++ +G + +
Sbjct: 221 LSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVY 280
Query: 542 FWDWKSCKVFRTLKCHEGVCIGCE-WHPLEQ 571
W+ KS L H G + C HP +Q
Sbjct: 281 VWNAKSRACVYKLPGHLG-SVNCTALHPTQQ 310
Score = 138 (53.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 55/250 (22%), Positives = 111/250 (44%)
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDK 395
GH + F +DG+ +A YD+ I W+ G+ F+ G ++++ + D
Sbjct: 34 GHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGEC-ENFAVLKGHKGAIMEVKFNADS 91
Query: 396 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRR----FVTSSDDKSLR 451
+++ AG +DK + WDM T + + H VN+ VD NRR ++SDD ++
Sbjct: 92 SHLVSAG-TDKTVRVWDMETGSCIRNFKSHTDIVNS---VDVNRRGPQMICSASDDGTVM 147
Query: 452 VWEF-GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 510
V + K+I + + +++ + + + +DNQI ++ + + + +
Sbjct: 148 VHDMRSKEAAKKFICK---YQQTAVTFNDAADNVICGGIDNQIKVW---DMLRNDVRYVL 201
Query: 511 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRTLKCHEGVCIGCEWHPL 569
+GH ++ S +G F++S + WD + R + ++G H
Sbjct: 202 SGH--RDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGAS-----HNF 254
Query: 570 EQSKVATCGW 579
E++ + CGW
Sbjct: 255 EKN-LLKCGW 263
Score = 117 (46.2 bits), Expect = 0.00061, P = 0.00061
Identities = 28/152 (18%), Positives = 66/152 (43%)
Query: 312 ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTE- 370
++ G+D ++K+WD+ + GH + +S ++G L+ S D ++ WD
Sbjct: 178 VICGGIDNQIKVWDMLRND-VRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRP 236
Query: 371 ---TGQVIRTFSTGKIPYVVKLNPD--DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH 425
+++ + + L + N + AG +D+ + W+ ++ + H
Sbjct: 237 FVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGH 296
Query: 426 LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
LG+VN + +++ DK++ + E +
Sbjct: 297 LGSVNCTALHPTQQILLSAGSDKTIFLGELDL 328
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 257 (95.5 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 88/316 (27%), Positives = 138/316 (43%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
+ P + GH V ++ F P + D +KIWDV +G T GH
Sbjct: 157 HAPWKNYRVLQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIWDVA-TGVLKLTLTGHIGQ 214
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILL 400
VR ++ N T +A DK +K WD E +VIR++ G + Y + L+P D ++L
Sbjct: 215 VRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYH-GHLHGVYCLALHPTLD---VVL 270
Query: 401 AGMSDKKIVQWDMNTKEITQEYD-QHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
G D WD+ TK Q + H V ++ + + +T S D +++ W+
Sbjct: 271 TGGRDSVCRVWDIRTK--MQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGK 328
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
+ I+ H ++ +++LHP N + S DN I +S + + I+ A
Sbjct: 329 SMATITN-HKKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLSLQRDIINAVA 386
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR---------TLKCHEGVCIGCEWHPLE 570
VN DG V GD +G WFWDWKS F+ +L+ G+ C +
Sbjct: 387 --VN--EDGVMVTGGD-KGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAAC--YDQT 439
Query: 571 QSKVATCGWDGLIKYW 586
S++ TC D IK W
Sbjct: 440 GSRLVTCEGDKTIKMW 455
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 38/164 (23%), Positives = 73/164 (44%)
Query: 425 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWL 484
HLG V ++ F +N F T S D+++++W+ V +K H+ + +++ ++
Sbjct: 169 HLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGV-LKLTLTGHIGQVRGLAVSNRHTYM 227
Query: 485 AAQSLDNQILIYSTRERFQLNKKKR-FAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 543
+ D Q+ + + NK R + GH+ Y ++ + D V++G + C W
Sbjct: 228 FSAGDDKQVKCWDLEQ----NKVIRSYHGHLHGVYCLALHPTLD--VVLTGGRDSVCRVW 281
Query: 544 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
D ++ L H+ P + +V T D IK+WD
Sbjct: 282 DIRTKMQIFVLP-HDSDVFSVLARPTDP-QVITGSHDSTIKFWD 323
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 254 (94.5 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 68/262 (25%), Positives = 121/262 (46%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P + + GH V++++F P+ G+L+ SA D V++W + GK + H+ VR
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQ-GNLLASASRDKTVRLWVLDRKGKSSE-FKAHTAPVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPDDDKQNILLA 401
+ F DG +TAS DK+IK W + + +S + + V K +PD ++++
Sbjct: 107 SVDFSADGQFLVTASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPDG---RLIVS 161
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK I WD +K+ + +G N + F N ++ D ++R+W+ + ++
Sbjct: 162 CSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLL 221
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + +S HP+ N L S D + I E + + GH G
Sbjct: 222 QHY-QVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQ---GH--TGPVFT 275
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V+FS DG SG + + W
Sbjct: 276 VSFSKDGELFTSGGADAQVLVW 297
Score = 207 (77.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/257 (24%), Positives = 113/257 (43%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 392
R + GH A+ F + + TAS+D + W + + R + ++ +P
Sbjct: 12 RYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
N+L + DK + W ++ K + E+ H V ++ F + + VT+S+DKS++V
Sbjct: 72 G---NLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKV 128
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNN---FSD 184
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC-IGC-EWHPLE 570
+ G+A V+FSP+G + S + WD + ++ + + H C + C +HP
Sbjct: 185 SV--GFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHS--CGVNCLSFHPSG 240
Query: 571 QSKVATCGWDGLIKYWD 587
S V T DG +K D
Sbjct: 241 NSLV-TASSDGTVKILD 256
Score = 195 (73.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 61/268 (22%), Positives = 109/268 (40%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH +++ F P I +A DT + +W + + R Y+GH V + F
Sbjct: 14 FKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYR-YVGHKDVVTSLQFSPQ 71
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
G +AS DK ++ W + F P V ++ D Q L+ DK I W
Sbjct: 72 GNLLASASRDKTVRLWVLDRKGKSSEFKAHTAP-VRSVDFSADGQ-FLVTASEDKSIKVW 129
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
M + +H V F + R V+ S+DK++++W+ + S+ +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDS-VGF 188
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ PN +A+ D+ + I+ R L + + H G C ++F P G +
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLL---QHYQVHS-CGVNC-LSFHPSGNSL 243
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
++ +G D ++ TL+ H G
Sbjct: 244 VTASSDGTVKILDLVEGRLIYTLQGHTG 271
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 52/243 (21%), Positives = 96/243 (39%)
Query: 245 KGEHVEDKSTFHGKEEKDYQ--GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAI 302
KG+ E K+ D+ G+ V +D K+ +R +++ HT V
Sbjct: 92 KGKSSEFKAHTAPVRSVDFSADGQFLVTASED-KSIKVWSMYRQRFLYSLYRHTHWVRCA 150
Query: 303 RFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDK 362
+F P G LI+S D +KIWD S +C+ + + F +GT +A D
Sbjct: 151 KFSPD-GRLIVSCSEDKTIKIWDT-TSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDH 208
Query: 363 NIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE 421
++ WD ++++ + + +P N L+ SD + D+ +
Sbjct: 209 AVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSG---NSLVTASSDGTVKILDLVEGRLIYT 265
Query: 422 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 481
H G V T++F + F + D + VW V + +P ++ + L +
Sbjct: 266 LQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFNQV--HYRDPSKRNLKRLHLEASP 323
Query: 482 NWL 484
+ L
Sbjct: 324 HLL 326
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 246 (91.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 65/291 (22%), Positives = 122/291 (41%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
+GH+ V A+RF P H I S MD + +W+ + + GH A+ D+ + D
Sbjct: 63 TGHSGEVFAVRFDPTAQH-IASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDS 121
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+AS D + WD E+GQ IR + G + + Q +L++ D + WD
Sbjct: 122 KTIFSASADMTLASWDIESGQRIRRY-IGHEEVINSVEISKRGQEMLVSASDDGTMGIWD 180
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
KE + L + + + + D ++ VW+ ++ Y HM ++
Sbjct: 181 PRQKEAIDYLETEL-PITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIV-YSMAGHMDTI 238
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA---CQVNFSPDGR 529
S+ + P++ L + S D+ + + R N+ R G + +++P G
Sbjct: 239 TSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGD 298
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
+ +G G+ WD+K+ K+ L H+G + P + + + D
Sbjct: 299 KIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSD 349
Score = 182 (69.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 44/158 (27%), Positives = 71/158 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ + S G+D + +WD+ + + GH + + D L+ S+D ++ WD
Sbjct: 205 GNEVFSGGIDNAIHVWDIRKKA-IVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWD 263
Query: 369 TE----TGQVIRTFSTGKIPYVVKL-----NPDDDKQNILLAGMSDKKIVQWDMNTKEIT 419
T + IRT+ + L NP DK + AG D+ +V WD T +I
Sbjct: 264 IRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDK---IAAGSGDRSVVVWDFKTGKIL 320
Query: 420 QEYDQHLGAVNTITFVDNNRRFVTS-SDDKSLRVWEFG 456
+ H G VN + F NN + S S D++L + E G
Sbjct: 321 YKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGELG 358
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 262 (97.3 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 79/296 (26%), Positives = 133/296 (44%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P + W+GH + + F G+L+ + G D VK+WDV SG+ T +G S+++
Sbjct: 312 LPSKAKKRWTGHNSEIYCMAF-NSIGNLLATGGGDKCVKVWDVI-SGQQKSTLLGASQSI 369
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
+SF + L S D + + W+TE G+ T + GK+ Y K N ++
Sbjct: 370 VSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLTGHIGKV-YTGKFI----NSNRVVT 424
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVWEFGIPVV 460
G D+ I WD+ T+ + N + + + + S D S+R W+
Sbjct: 425 GSHDRTIKLWDLQKGYCTRTIFC-FSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEP 483
Query: 461 IKYISEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTR--ERFQLNKKKRFAGHIVAG 517
+ +S H + SI+ P NTN + S D+ + I R + + K + +
Sbjct: 484 TQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGL--N 541
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL-KCHEG---VCIGCEWHPL 569
+ + ++SPDGR++ SG +G WD + K + L K H VC C W PL
Sbjct: 542 WT-KASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCC-CSWSPL 595
Score = 37 (18.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 9 DEKEDELDKPENQNDQNPDSAALESS 34
+E D K Q D P AA++ S
Sbjct: 254 NEANDFYQKMVEQRDSTPAKAAVQLS 279
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 248 (92.4 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 71/275 (25%), Positives = 132/275 (48%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + ++GH V+ ++F P HL+ S+ D V++W G+ + + H+ +VR
Sbjct: 49 PQSRAYRFTGHKDAVTCVQFSPS-AHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGM 403
+ F DG LTAS D++IK W ++I T + +PD L+ +
Sbjct: 107 SVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQ----LMVSV 162
Query: 404 SDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
SD + V+ WD +++++ + + G + + F ++ T+S D ++RVW+ +++
Sbjct: 163 SDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQ 222
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + H ++ ++S HP+ N L S D+ + I E L GH G A V
Sbjct: 223 HY-QVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYT---LHGH--QGSASCV 276
Query: 523 NFSPDG-RFVMSG-DGEGKCWFWDWKSCKVFRTLK 555
+FS G +F +G D + W ++ S R L+
Sbjct: 277 SFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVLQ 311
Score = 227 (85.0 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 70/301 (23%), Positives = 130/301 (43%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L + GH ++++ F P G I S +D V +W++ + R + GH AV +
Sbjct: 10 LERNFKGHRDAITSLDFSPS-GKQIASGSVDASVMVWNMKPQSRAYR-FTGHKDAVTCVQ 67
Query: 348 FCNDGTKFLTASYDKNIKYW-DTETGQ-VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
F ++S DK ++ W + G+ V+ TG + V D Q++L A D
Sbjct: 68 FSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCF---SADGQSLLTAS-DD 123
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ I W ++ ++I +H V F + + V+ SDD+++++W+ +I
Sbjct: 124 QSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFC 183
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 525
EP +S + HP++ +A S DN + ++ R L + + H A A ++F
Sbjct: 184 EPGGYSS-YVDFHPSSTCIATASSDNTVRVWDIRTHTLL---QHYQVHSAAVNA--LSFH 237
Query: 526 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 585
P G +++ + D ++ TL H+G C + A+ G D +
Sbjct: 238 PSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSA-SCVSFSRSGDQFASAGSDQQVMV 296
Query: 586 W 586
W
Sbjct: 297 W 297
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/255 (20%), Positives = 106/255 (41%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPD 392
R + GH A+ + F G + + S D ++ W+ + F+ K V+ +P
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
++L + DK + W + K + + H G+V ++ F + + +T+SDD+S+++
Sbjct: 72 ---AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKL 128
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W +I + E H + + P+ + + S D + ++ R QL G
Sbjct: 129 WSVHRQKIICTLRE-HNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSR-QLIHTFCEPG 186
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 572
GY+ V+F P + + + WD ++ + + + H +HP +
Sbjct: 187 ----GYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHP-SGN 241
Query: 573 KVATCGWDGLIKYWD 587
+ T D +K D
Sbjct: 242 HLLTASSDSTLKILD 256
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 250 (93.1 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 71/280 (25%), Positives = 127/280 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + GH V++++F P G+L+ SA D V++W GK + H+ VR
Sbjct: 49 PQARAFRYVGHKDVVTSVQFSP-LGNLLASASRDRTVRLWIPDKRGKSSE-FKAHTAPVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPDDDKQNILLA 401
+ F DG TAS DK+IK W+ + + +S + + V K +PD ++++
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWNMYRQRFL--YSLYRHTHWVRCAKFSPDG---RLIVS 161
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK I WD K+ + +G N + F N ++ D ++++W+ + ++
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLL 221
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + +S HP+ N++ S D + I E + + GH G
Sbjct: 222 QHY-QVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQ---GH--TGPVFT 275
Query: 522 VNFSPDGRFVMSGDGEGKCWFW----DWKSCK--VFRTLK 555
V+FS G SG + + W D+ +CK + R LK
Sbjct: 276 VSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLK 315
Score = 211 (79.3 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 61/268 (22%), Positives = 113/268 (42%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH ++++ F P G + +A DT + +W+ + R Y+GH V + F
Sbjct: 14 FKGHKAAITSVDFSPS-GKQLATASWDTFLMLWNCKPQARAFR-YVGHKDVVTSVQFSPL 71
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
G +AS D+ ++ W + F P V ++ D Q L DK I W
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKSSEFKAHTAP-VRSVDFSADGQ-FLATASEDKSIKVW 129
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+M + +H V F + R V+ S+DK++++W+ + S+ +
Sbjct: 130 NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS-VGF 188
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ +PN +A+ D+ + I+ R L + +G G C V+F P G ++
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG----GVNC-VSFHPSGNYI 243
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
++ +G D ++ TL+ H G
Sbjct: 244 ITASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 207 (77.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 60/256 (23%), Positives = 113/256 (44%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 392
R + GH A+ + F G + TAS+D + W+ + + R + V+ +P
Sbjct: 12 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSP- 70
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
N+L + D+ + W + + + E+ H V ++ F + + T+S+DKS++V
Sbjct: 71 --LGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WNMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 571
+ G+A V+F+P+G + S + WD + K+ + + H G + C +HP
Sbjct: 185 SV--GFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG-VNCVSFHP-SG 240
Query: 572 SKVATCGWDGLIKYWD 587
+ + T DG +K D
Sbjct: 241 NYIITASSDGTLKILD 256
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 176 (67.0 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 40/118 (33%), Positives = 64/118 (54%)
Query: 318 DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT 377
D +K+WD F +C+RT GH V ++ +G ++AS DK IK W+ +TG ++T
Sbjct: 3 DMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 61
Query: 378 FSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 434
F TG +V + P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 62 F-TGHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 116
Score = 140 (54.3 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 17 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 74
Query: 349 CNDGTKFLTASYDKNIKYWDTET 371
DGT + S D+ ++ W T
Sbjct: 75 NQDGTLIASCSNDQTVRVWVVAT 97
Score = 114 (45.2 bits), Expect = 0.00039, P = 0.00039
Identities = 39/171 (22%), Positives = 73/171 (42%)
Query: 329 SGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 388
+G C++T+ GH + VR + DGT + S D+ ++ W T + + +VV+
Sbjct: 55 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE--HVVE 112
Query: 389 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
I A S + E T H V + F + ++ +DDK
Sbjct: 113 C--------ISWAPESSYSSIS------EATGSEVGHDNWVRGVLFHSGGKFILSCADDK 158
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
+LRVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 159 TLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 208
Score = 93 (37.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 32/127 (25%), Positives = 55/127 (43%)
Query: 359 SYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTK 416
S D IK WD + + IRT G V V + P+ D +++ DK I W++ T
Sbjct: 1 SADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKMWEVQTG 56
Query: 417 EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 476
+ + H V + + + S+D+++RVW + E H H + IS
Sbjct: 57 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECIS 115
Query: 477 LHPNTNW 483
P +++
Sbjct: 116 WAPESSY 122
Score = 78 (32.5 bits), Expect = 2.4e-18, Sum P(2) = 2.4e-18
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 522 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 581
V F G+F++S + WD+K+ + +TL HE ++H V T D
Sbjct: 142 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQ 200
Query: 582 LIKYWD 587
+K W+
Sbjct: 201 TVKVWE 206
Score = 78 (32.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 25/135 (18%), Positives = 59/135 (43%)
Query: 404 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 463
+D I WD E + H V+++ + N V++S DK++++WE +K
Sbjct: 2 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 61
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
+ H + + + + +A+ S D + ++ + + + R H+V C ++
Sbjct: 62 FTG-HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK-ECKAELREHEHVVE---C-IS 115
Query: 524 FSPDGRFVMSGDGEG 538
++P+ + + G
Sbjct: 116 WAPESSYSSISEATG 130
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 247 (92.0 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 70/298 (23%), Positives = 126/298 (42%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT GH V AI F YG I + D K+W V +GKC T+ GH+ + +SF
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV-ETGKCYHTFRGHTAEIVCLSF 185
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
T T S D K WD ++G+ + T TG ++ L+ + N ++ G D +
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQSGEEVFTL-TGHSAEIISLS-FNTSGNRIITGSFDHTV 243
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
W+ +T H +++ F + +T S DK+ ++W+ + ++ H
Sbjct: 244 TVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTG-H 302
Query: 469 MHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG 528
+ +A S D I+S R + K + GH G +++F+P G
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLE---GH--EGEISKISFNPQG 357
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
+++G + WD ++ + + L+ H C ++ + + T D + W
Sbjct: 358 NRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGDIIITGSKDNTCRIW 414
Score = 192 (72.6 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 66/284 (23%), Positives = 115/284 (40%)
Query: 307 KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIK 365
K G ++ D K+WD SG+ + T GH V I+F N G K T S+DK K
Sbjct: 102 KSGSCFITGSYDRTCKLWDTA-SGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
Query: 366 YWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH 425
W ETG+ TF G +V L+ + + ++ G D WD+ + E H
Sbjct: 161 LWSVETGKCYHTFR-GHTAEIVCLS-FNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGH 218
Query: 426 LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA 485
+ +++F + R +T S D ++ VWE + Y H + S + + + +
Sbjct: 219 SAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKV-YTLIGHCAEISSAVFNWDCSLIL 277
Query: 486 AQSLDNQILIYSTRERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 543
S+D ++ +N K GH F G+ + + +G +
Sbjct: 278 TGSMDKTCKLWDA-----VNGKCVATLTGH--DDEILDSCFDYTGKLIATASADGTARIF 330
Query: 544 DWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + L+ HEG ++P + +++ T D + WD
Sbjct: 331 SAATRECVTKLEGHEGEISKISFNP-QGNRLLTGSSDKTARIWD 373
Score = 169 (64.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/222 (22%), Positives = 95/222 (42%)
Query: 339 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLN-PDDDKQ 396
H + +++ G+ F+T SYD+ K WDT +G+ + T + + Y + N P DK
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK- 149
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
+ G DK W + T + + H + ++F + T S D + ++W+
Sbjct: 150 --IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
+ + H + S+S + + N + S D+ + ++ E K GH A
Sbjct: 208 SGEEV-FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVW---EADTGRKVYTLIGHC-A 262
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 558
+ V F+ D +++G + C WD + K TL H+
Sbjct: 263 EISSAV-FNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD 303
Score = 117 (46.2 bits), Expect = 0.00090, P = 0.00090
Identities = 34/125 (27%), Positives = 53/125 (42%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+ V T +GH + F G LI +A D +I+ +C+ GH + I
Sbjct: 294 KCVATLTGHDDEILD-SCFDYTGKLIATASADGTARIFSAATR-ECVTKLEGHEGEISKI 351
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
SF G + LT S DK + WD +TGQ ++ G + + K +I++ G D
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLE-GHTDEIFSC-AFNYKGDIIITGSKDN 409
Query: 407 KIVQW 411
W
Sbjct: 410 TCRIW 414
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 258 (95.9 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 75/300 (25%), Positives = 135/300 (45%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L +T GH + V ++ F L+ SA D VKIWD +G R GH+ +VR +
Sbjct: 297 LQNTLEGHNEWVKSV-VFSHDSRLLASASDDGTVKIWDTA-TGTLQRMLKGHNDSVRSVV 354
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
F +D + S D+ ++ W+T TG + TF + + D ++ LA SD
Sbjct: 355 FSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRR---LASASDGG 411
Query: 408 IVQ-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE 466
V+ WD T + + H VN+++F ++R ++SDD+++++W + + + E
Sbjct: 412 NVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTL-E 470
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 526
H + S+ ++ +A+ S D + I+ T + + H + V FS
Sbjct: 471 GHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT---VPLQNNLESH--DNWVRSVVFSH 525
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
D R + S + WD + + TL+ H+ + P + +A+ DG +K W
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIW 584
Score = 254 (94.5 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 72/296 (24%), Positives = 134/296 (45%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH + V ++ F L+ SA D VKIWD S T GH++ V+ + F +D
Sbjct: 259 FKGHDRAVGSVSFSHD-SRLLASASGDGTVKIWDTATSF-LQNTLEGHNEWVKSVVFSHD 316
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
+AS D +K WDT TG + R G V + D + ++ +G +D+ + W
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQRMLK-GHNDSVRSVVFSHDSR-LIASGSNDRTVRIW 374
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+ T + ++ H +V ++F ++RR ++SD ++++W+ ++ + E H
Sbjct: 375 ETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS-LQNVLEGHDDC 433
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ S+S P++ LA+ S D + I+ + ++ GH + V FS D R +
Sbjct: 434 VNSVSFSPDSRLLASASDDRTVKIWHAATG---SLQRTLEGH--NDWVRSVVFSHDSRLI 488
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
S + WD + + L+ H+ + + +A+ D +K WD
Sbjct: 489 ASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH-DSRLLASASDDMTVKIWD 543
Score = 245 (91.3 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 77/295 (26%), Positives = 131/295 (44%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V ++ F LI S D V+IW+ +G T+ H +V +SF +D
Sbjct: 345 GHNDSVRSV-VFSHDSRLIASGSNDRTVRIWET-TTGLLRHTFEDHEDSVMAVSFAHDSR 402
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ-WD 412
+ +AS N+K WDT TG ++ G V ++ D + LLA SD + V+ W
Sbjct: 403 RLASASDGGNVKIWDTRTGS-LQNVLEGHDDCVNSVSFSPDSR--LLASASDDRTVKIWH 459
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
T + + + H V ++ F ++R ++SDD ++++W+ V ++ E H + +
Sbjct: 460 AATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT-VPLQNNLESHDNWV 518
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 532
S+ ++ LA+ S D + I+ T + + GH V+FSPD R +
Sbjct: 519 RSVVFSHDSRLLASASDDMTVKIWDTATG---SLENTLEGH--DDRVNSVSFSPDSRLLA 573
Query: 533 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
S +G W + V T V I + + +A+ DG +K WD
Sbjct: 574 SASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTS-NLLASAMDDGTVKIWD 627
Score = 158 (60.7 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/171 (28%), Positives = 71/171 (41%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L T GH V ++ F LI SA D VKIWD H VR +
Sbjct: 465 LQRTLEGHNDWVRSV-VFSHDSRLIASASDDMTVKIWDTATV-PLQNNLESHDNWVRSVV 522
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
F +D +AS D +K WDT TG + T G V ++ D + LLA SD
Sbjct: 523 FSHDSRLLASASDDMTVKIWDTATGSLENTLE-GHDDRVNSVSFSPDSR--LLASASDDG 579
Query: 408 IVQ-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
V+ W T + +D ++ F + ++ DD ++++W+ I
Sbjct: 580 TVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEI 630
Score = 149 (57.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/145 (28%), Positives = 61/145 (42%)
Query: 280 DHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGH 339
D +P L + H V ++ F L+ SA D VKIWD +G T GH
Sbjct: 501 DTATVP--LQNNLESHDNWVRSV-VFSHDSRLLASASDDMTVKIWDTA-TGSLENTLEGH 556
Query: 340 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TGKIPYVVKLNPDDDKQNI 398
V +SF D +AS D +K W TG V TF +G++ + + N+
Sbjct: 557 DDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFS---HTSNL 613
Query: 399 LLAGMSDKKIVQWDMNTKEITQEYD 423
L + M D + WDM + +D
Sbjct: 614 LASAMDDGTVKIWDMEIYSLRHTFD 638
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 246 (91.7 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 67/262 (25%), Positives = 119/262 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P + + GH V++++F P +G+L+ SA D V++W GK + H+ VR
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGK-FSEFKAHTAPVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPDDDKQNILLA 401
+ F DG TAS DK+IK W + + +S + + V K +PD ++++
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPDG---RLIVS 161
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK I WD K+ + +G N + F + ++ D++++VW+ + ++
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLL 221
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + IS HP+ N+L S D + I E + + GH G
Sbjct: 222 QHY-QVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ---GH--TGPVFT 275
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V+FS G SG + + W
Sbjct: 276 VSFSKGGELFASGGADTQVLLW 297
Score = 221 (82.9 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 65/230 (28%), Positives = 103/230 (44%)
Query: 275 AKAANDHC---YIP-KR-LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS 329
A A+ D +IP KR + HT V ++ F G + +A D +K+W ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSAD-GQFLATASEDKSIKVWSMYRQ 134
Query: 330 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVK 388
Y H+ VR F DG ++ S DK IK WDT Q + FS V
Sbjct: 135 RFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 389 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
NP I AG SD+ + WD+ ++ Q Y H G VN I+F ++ VT+S D
Sbjct: 194 FNPSGTC--IASAG-SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDG 250
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 498
+L++ + + + Y + H + ++S A+ D Q+L++ T
Sbjct: 251 TLKILDL-LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 197 (74.4 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 60/256 (23%), Positives = 111/256 (43%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 392
R + GH A+ + +G + TAS+D + W+ + + R + V+ +P
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
N+L + D+ + W + + E+ H V ++ F + + T+S+DKS++V
Sbjct: 72 G---NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 571
+ G+A V+F+P G + S + WD + K+ + + H G + C +HP +
Sbjct: 185 SV--GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG-VNCISFHPSDN 241
Query: 572 SKVATCGWDGLIKYWD 587
V T DG +K D
Sbjct: 242 YLV-TASSDGTLKILD 256
Score = 190 (71.9 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 56/268 (20%), Positives = 109/268 (40%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH ++++ P G + +A DT + +W+ + R Y+GH V + F
Sbjct: 14 FKGHKAAITSLDLSPN-GKQLATASWDTFLMLWNFKPHARAYR-YVGHKDVVTSVQFSPH 71
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
G +AS D+ ++ W + F P V ++ D Q L DK I W
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAP-VRSVDFSADGQ-FLATASEDKSIKVW 129
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
M + +H V F + R V+ S+DK++++W+ + S+ +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS-VGF 188
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ +P+ +A+ D + ++ R L + +G G C ++F P ++
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG----GVNC-ISFHPSDNYL 243
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
++ +G D ++ TL+ H G
Sbjct: 244 VTASSDGTLKILDLLEGRLIYTLQGHTG 271
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 240 (89.5 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 72/295 (24%), Positives = 130/295 (44%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMR--TYMGHSKAVRDISFCND 351
GH + + +F YG + S G D ++ +W+V+ G+C+ GH + ++ + D
Sbjct: 60 GHKGEIYSCKF-NSYGTALASGGSDKEIFLWNVY--GECINYSVLKGHKGTILELHWSTD 116
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
+ TA DK+I WD+ G++I+ V P ++ +G D+ +
Sbjct: 117 SNEIYTACTDKSIGVWDSNKGELIKRIREHS-GVVNSCCPARRGPPLVASGSDDRSARIF 175
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D +K T + QH V ++ F D + + +T D +RVW+ Y H +
Sbjct: 176 DTRSKGSTHLF-QHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDT 234
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK-KRFAG--HIVAGYACQVNFSPDG 528
+ S S+ + +L + S+DN I+ R N+ K F G + + ++S DG
Sbjct: 235 ITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDG 294
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 583
R + G + + + WD + ++ L H G +HP E +A+C D I
Sbjct: 295 RRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPI-IASCSSDKTI 348
Score = 180 (68.4 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 264 QGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKI 323
+G VA D ++A K H + H V+++ F LI + G+D +++
Sbjct: 158 RGPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTSVCFSDASDQLI-TGGIDNVIRV 215
Query: 324 WDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET----GQVIRTFS 379
WD+ N + T H + S DG L+ S D + K WD + I+TF+
Sbjct: 216 WDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFN 275
Query: 380 TGKIPY---VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD 436
+ + ++K + D + I G SD+++ WD NTK++ H G VN +TF
Sbjct: 276 GAQNNFEKNLIKSSWSIDGRRIG-CGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHP 334
Query: 437 NNRRFVTSSDDKSLRVWE 454
N + S DK++ + E
Sbjct: 335 NEPIIASCSSDKTIYLGE 352
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 51/210 (24%), Positives = 85/210 (40%)
Query: 337 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIR-TFSTGKIPYVVKLNPDDDK 395
+GH + F + GT + DK I W+ G+ I + G +++L+ D
Sbjct: 59 IGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVY-GECINYSVLKGHKGTILELHWSTDS 117
Query: 396 QNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS-SDDKSLRVWE 454
I A +DK I WD N E+ + +H G VN+ V S SDD+S R+++
Sbjct: 118 NEIYTA-CTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFD 176
Query: 455 FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 514
H + + S+ ++ L +DN I ++ R Q + A H
Sbjct: 177 TRSKGSTHLFQ--HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRN--QEDPLYTLASH- 231
Query: 515 VAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ S DG +++S + C WD
Sbjct: 232 -QDTITSTSVSKDGAYLLSNSMDNSCKIWD 260
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 244 (91.0 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 71/298 (23%), Positives = 126/298 (42%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
++T GH V AI F YG I + D K+W V +GKC T+ GH+ + +SF
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSV-ETGKCYHTFRGHTAEIVCLSF 185
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
T T S D K WD + G+ + T G ++ L+ + I+ G D +
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQNGEEVYTLR-GHSAEIISLSFNTSGDRII-TGSFDHTV 243
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
V WD +T H +++ +F + +T S DK+ ++W+ + ++ H
Sbjct: 244 VVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTG-H 302
Query: 469 MHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG 528
+ +A S D I+S R + K + GH G +++F+P G
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE---GH--EGEISKISFNPQG 357
Query: 529 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
+++G + WD ++ + + L+ H C ++ + + V T D + W
Sbjct: 358 NHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGSKDNTCRIW 414
Score = 189 (71.6 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 64/282 (22%), Positives = 114/282 (40%)
Query: 307 KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKNIK 365
K G ++ D K+WD SG+ + T GH V I+F N G K T S+DK K
Sbjct: 102 KSGSCFITGSYDRTCKLWDTA-SGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCK 160
Query: 366 YWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQH 425
W ETG+ TF G +V L+ + + ++ G D WD+ E H
Sbjct: 161 LWSVETGKCYHTFR-GHTAEIVCLS-FNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGH 218
Query: 426 LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA 485
+ +++F + R +T S D ++ VW+ + + H + S S + + + +
Sbjct: 219 SAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIG-HCAEISSASFNWDCSLIL 277
Query: 486 AQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 545
S+D ++ + I+ +C F G+ + + +G +
Sbjct: 278 TGSMDKTCKLWDATNGKCVATLTGHDDEILD--SC---FDYTGKLIATASADGTARIFSA 332
Query: 546 KSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ K L+ HEG ++P + + + T D + WD
Sbjct: 333 ATRKCIAKLEGHEGEISKISFNP-QGNHLLTGSSDKTARIWD 373
Score = 173 (66.0 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 48/222 (21%), Positives = 95/222 (42%)
Query: 339 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLN-PDDDKQ 396
H + +++ G+ F+T SYD+ K WDT +G+ + T + + Y + N P DK
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK- 149
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
+ G DK W + T + + H + ++F + T S D + ++W+
Sbjct: 150 --IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
+ Y H + S+S + + + + S D+ ++++ ++N GH
Sbjct: 208 NGEEV-YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNI---LIGHCAE 263
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 558
+F+ D +++G + C WD + K TL H+
Sbjct: 264 --ISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD 303
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/125 (28%), Positives = 52/125 (41%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+ V T +GH + F G LI +A D +I+ KC+ GH + I
Sbjct: 294 KCVATLTGHDDEILD-SCFDYTGKLIATASADGTARIFSAATR-KCIAKLEGHEGEISKI 351
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
SF G LT S DK + WD +TGQ ++ G + + K NI++ G D
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLE-GHTDEIFSC-AFNYKGNIVITGSKDN 409
Query: 407 KIVQW 411
W
Sbjct: 410 TCRIW 414
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 246 (91.7 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 78/276 (28%), Positives = 120/276 (43%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
+ P L+ SGH V + P AG D +KIWD+ SG T GH
Sbjct: 150 HAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAG-DRTIKIWDLA-SGVLKLTLTGHIAT 207
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILL 400
VR ++ + DK +K WD ET +VIR + G + Y +KL+P D +L+
Sbjct: 208 VRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYH-GHLSGVYALKLHPTLD---VLV 263
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
D WDM T++ H V ++ + + + VT S D ++R+W+
Sbjct: 264 TAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKT 323
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 519
+ ++ H ++ ++SLHP+ A+ S DN I + E F N F GH
Sbjct: 324 LTTLTH-HKKTVRALSLHPDEFTFASGSSDN-IKHWKFPEGAFMGN----FEGHNAIVNT 377
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+N + SG G FWDWKS ++ L+
Sbjct: 378 LSIN---SDNVMFSGADNGSMCFWDWKSGHKYQELQ 410
Score = 154 (59.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 45/174 (25%), Positives = 84/174 (48%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
VH SGH V+++ ++ +++ MD+ +++WD+ +GK + T H K VR +S
Sbjct: 282 VHVLSGHKSTVASLAV-QEFDPQVVTGSMDSTIRLWDLA-AGKTLTTLTHHKKTVRALSL 339
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D F + S D NIK+W G + F G V L+ + D N++ +G + +
Sbjct: 340 HPDEFTFASGSSD-NIKHWKFPEGAFMGNFE-GHNAIVNTLSINSD--NVMFSGADNGSM 395
Query: 409 VQWDMNTKEITQEYDQHL--GAVNT------ITFVDNNRRFVTSSDDKSLRVWE 454
WD + QE + G++++ +F R +T DKS+++++
Sbjct: 396 CFWDWKSGHKYQELQSVVQPGSLDSEAGIFASSFDKTGLRLITCEADKSVKIYK 449
Score = 128 (50.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 43/187 (22%), Positives = 76/187 (40%)
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
G D+ I WD+ + + H+ V + + + +DK ++ W+ VI
Sbjct: 181 GAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVI 240
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH--IVAGYA 519
++ H+ + ++ LHP + L D ++ R R ++ +GH VA A
Sbjct: 241 RHY-HGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHV---LSGHKSTVASLA 296
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
Q F P V++G + WD + K TL H+ HP ++ A+
Sbjct: 297 VQ-EFDPQ---VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP-DEFTFASGSS 351
Query: 580 DGLIKYW 586
D IK+W
Sbjct: 352 DN-IKHW 357
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 246 (91.7 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 66/262 (25%), Positives = 120/262 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P + + GH V++++F P+ G+L+ SA D V++W + GK + H+ VR
Sbjct: 49 PHARAYRYVGHKDVVTSLQFSPQ-GNLLASASRDRTVRLWVLDRKGKSSE-FKAHTAPVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPDDDKQNILLA 401
+ F DG +TAS DK+IK W + + +S + + V K +PD ++++
Sbjct: 107 SVDFSADGQLLVTASEDKSIKVWSMFRQRFL--YSLYRHTHWVRCAKFSPDG---RLIVS 161
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK I WD K+ + +G N + F N ++ D ++++W+ + ++
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLL 221
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + +S HP N L S D + + E + + GH G
Sbjct: 222 QHY-QVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQ---GH--TGPVFT 275
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V+FS DG + SG + + W
Sbjct: 276 VSFSKDGELLTSGGADAQVLIW 297
Score = 214 (80.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 63/257 (24%), Positives = 115/257 (44%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 392
R++ GH A+ F + + TAS+D + W + + R + ++ +P
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
N+L + D+ + W ++ K + E+ H V ++ F + + VT+S+DKS++V
Sbjct: 72 G---NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV 128
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMFRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC-IGC-EWHPLE 570
+ G+A V+F+P+G + S + WD + K+ + + H C + C +HPL
Sbjct: 185 SV--GFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHS--CGVNCLSFHPLG 240
Query: 571 QSKVATCGWDGLIKYWD 587
S V T DG +K D
Sbjct: 241 NSLV-TASSDGTVKMLD 256
Score = 209 (78.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ HT V ++ F G L+++A D +K+W +F Y H+ VR F D
Sbjct: 98 FKAHTAPVRSVDFSAD-GQLLVTASEDKSIKVWSMFRQRFLYSLYR-HTHWVRCAKFSPD 155
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G ++ S DK IK WDT Q + FS V NP+ I AG SD +
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTC--IASAG-SDHAVKI 212
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
WD+ ++ Q Y H VN ++F VT+S D ++++ + I + Y + H
Sbjct: 213 WDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDL-IEGRLIYTLQGHTG 271
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYST 498
+ ++S + L + D Q+LI+ T
Sbjct: 272 PVFTVSFSKDGELLTSGGADAQVLIWRT 299
Score = 195 (73.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 62/273 (22%), Positives = 115/273 (42%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L ++ GH +++ F P I +A DT + +W + + R Y+GH V +
Sbjct: 10 LERSFKGHKAAITSADFSPNCKQ-IATASWDTFLMLWSLKPHARAYR-YVGHKDVVTSLQ 67
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
F G +AS D+ ++ W + F P V ++ D Q +L+ DK
Sbjct: 68 FSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAP-VRSVDFSADGQ-LLVTASEDKS 125
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
I W M + +H V F + R V+ S+DK++++W+ + S+
Sbjct: 126 IKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK-KRFAGHIVAGYACQVNFSP 526
+ + +PN +A+ D+ + I+ R +NK + + H G C ++F P
Sbjct: 186 -VGFANFVDFNPNGTCIASAGSDHAVKIWDIR----MNKLLQHYQVHS-CGVNC-LSFHP 238
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
G +++ +G D ++ TL+ H G
Sbjct: 239 LGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTG 271
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/131 (32%), Positives = 65/131 (49%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K+ V+ +S + + F P G I SAG D VKIWD+ K ++ Y HS V
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPN-GTCIASAGSDHAVKIWDI-RMNKLLQHYQVHSCGVNC 233
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGM 403
+SF G +TAS D +K D G++I T TG + + V + D + +L +G
Sbjct: 234 LSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPV-FTVSFSKDGE---LLTSGG 289
Query: 404 SDKKIVQWDMN 414
+D +++ W N
Sbjct: 290 ADAQVLIWRTN 300
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/212 (22%), Positives = 84/212 (39%)
Query: 245 KGEHVEDKSTFHGKEEKDYQ--GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAI 302
KG+ E K+ D+ G+ V +D K+ +R +++ HT V
Sbjct: 92 KGKSSEFKAHTAPVRSVDFSADGQLLVTASED-KSIKVWSMFRQRFLYSLYRHTHWVRCA 150
Query: 303 RFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDK 362
+F P G LI+S D +KIWD N +C+ + + F +GT +A D
Sbjct: 151 KFSPD-GRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSVGFANFVDFNPNGTCIASAGSDH 208
Query: 363 NIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE 421
+K WD ++++ + + +P N L+ SD + D+ +
Sbjct: 209 AVKIWDIRMNKLLQHYQVHSCGVNCLSFHP---LGNSLVTASSDGTVKMLDLIEGRLIYT 265
Query: 422 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
H G V T++F + + D + +W
Sbjct: 266 LQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 226 (84.6 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 70/280 (25%), Positives = 129/280 (46%)
Query: 305 FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNI 364
+ + G +L+AG + V++W+V SG C+ Y GH + D+ D TKF + DK I
Sbjct: 22 YNRTGKYVLAAGNERVVRLWNV-KSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFI 80
Query: 365 KYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ 424
+ WD TG+V R G + + + ++D +IL +G D K+ WD + + Q
Sbjct: 81 QVWDVNTGKVDRRLG-GHLAQINTIRYNEDS-SILASGSFDSKVRLWDCRSNSFSPI--Q 136
Query: 425 HLG-AVNTITFVD-NNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN 482
L A ++++ +D VT S D +LR ++ + S+ H + S+ + +
Sbjct: 137 VLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLS---SDYFSHPITSVKTSKSAS 193
Query: 483 WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 542
+ SL++ I + +E ++ K + G Y + +F+ V SG +GK +
Sbjct: 194 FSLISSLNSSIHLLD-QETGKILKS--YIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYL 250
Query: 543 WDWKS-CKVFRTLKCHEGVCIGCEWHP-LEQSKVATCGWD 580
WD ++ ++ T + HP ++ +AT D
Sbjct: 251 WDLENETQITSTSVVGTPIVTDISCHPTMDDFIIATVHGD 290
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ + G L A ++ ++ W+ ++G I ++ G ++ L+ D G D
Sbjct: 20 VKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYA-GHGHEILDLDLVYDSTKFASCG-GD 77
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
K I WD+NT ++ + HL +NTI + +++ + S D +R+W+
Sbjct: 78 KFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWD 126
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 172 (65.6 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 39/115 (33%), Positives = 63/115 (54%)
Query: 321 VKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST 380
+K+WD F +C+RT GH V ++ +G ++AS DK IK W+ +TG ++TF T
Sbjct: 3 IKLWD-FQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-T 60
Query: 381 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITF 434
G +V + P+ D L+A S+ + V+ W + TKE E +H V I++
Sbjct: 61 GHREWVRMVRPNQD--GTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISW 113
Score = 140 (54.3 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 14 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 71
Query: 349 CNDGTKFLTASYDKNIKYWDTET 371
DGT + S D+ ++ W T
Sbjct: 72 NQDGTLIASCSNDQTVRVWVVAT 94
Score = 114 (45.2 bits), Expect = 0.00037, P = 0.00037
Identities = 39/171 (22%), Positives = 73/171 (42%)
Query: 329 SGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK 388
+G C++T+ GH + VR + DGT + S D+ ++ W T + + +VV+
Sbjct: 52 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE--HVVE 109
Query: 389 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
I A S + E T H V + F + ++ +DDK
Sbjct: 110 C--------ISWAPESSYSSIS------EATGSEVGHDNWVRGVLFHSGGKFILSCADDK 155
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
+LRVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 156 TLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 205
Score = 86 (35.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 30/122 (24%), Positives = 53/122 (43%)
Query: 364 IKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE 421
IK WD + + IRT G V V + P+ D +++ DK I W++ T +
Sbjct: 3 IKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKMWEVQTGYCVKT 58
Query: 422 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 481
+ H V + + + S+D+++RVW + E H H + IS P +
Sbjct: 59 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPES 117
Query: 482 NW 483
++
Sbjct: 118 SY 119
Score = 78 (32.5 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 522 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 581
V F G+F++S + WD+K+ + +TL HE ++H V T D
Sbjct: 139 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQ 197
Query: 582 LIKYWD 587
+K W+
Sbjct: 198 TVKVWE 203
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 213 (80.0 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 51/166 (30%), Positives = 83/166 (50%)
Query: 290 HTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFC 349
H +GH +++++F P + L++SA D +K+WD F SG+ RT GH+ AV+DI F
Sbjct: 100 HILTGHRNCINSVKFHPSFS-LMVSASEDATIKVWD-FESGEFERTLKGHTNAVQDIDFD 157
Query: 350 NDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKK 407
G + S D IK WD +T ++T G V V+ P D+ L++ DK
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLH-GHDHNVSCVRFTPSGDQ---LISSSRDKT 213
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
I W+ T + H V IT ++ + S+D++++ W
Sbjct: 214 IKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Score = 167 (63.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 54/209 (25%), Positives = 92/209 (44%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V T GH VS +RF P G ++S+ D +K+W+ +G C++T +GH VR I+
Sbjct: 183 VKTLHGHDHNVSCVRFTPS-GDQLISSSRDKTIKVWEAA-TGYCIKTLVGHEDWVRKITV 240
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG+ + S D+ IK W+ G+ + T+ +VV+ I + G
Sbjct: 241 SEDGSCIASCSNDQTIKTWNIVKGECLATYREHS--HVVECLAFSTANIIDIPGSL---- 294
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYISEP 467
++T E + Q G V T S DK++++WE + YI
Sbjct: 295 ----LSTPEGKSKVKQGPGG----NLVGQCGYLATGSRDKTIKIWELATGRCLATYIG-- 344
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIY 496
H + + ++ HP +L + D I ++
Sbjct: 345 HDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 154 (59.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 46/157 (29%), Positives = 73/157 (46%)
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 397
GH + + F + ++AS D IK WD E+G+ RT G V + D DK
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLK-GHTNAVQDI--DFDKTG 160
Query: 398 ILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
LLA S D I WD T + + H V+ + F + + ++SS DK+++VWE
Sbjct: 161 NLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAA 220
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQI 493
IK + H + I++ + + +A+ S D I
Sbjct: 221 TGYCIKTLVG-HEDWVRKITVSEDGSCIASCSNDQTI 256
Score = 142 (55.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 57/211 (27%), Positives = 88/211 (41%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH V I + G I S D +K W++ G+C+ TY HS V ++F
Sbjct: 225 IKTLVGHEDWVRKITV-SEDGSCIASCSNDQTIKTWNIVK-GECLATYREHSHVVECLAF 282
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDD---KQNILLAGMSD 405
TA NI D G ++ T GK VK P + + L G D
Sbjct: 283 S-------TA----NII--DIP-GSLLST-PEGKSK--VKQGPGGNLVGQCGYLATGSRD 325
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
K I W++ T Y H V + F + ++ DDK++RVW+ IK I+
Sbjct: 326 KTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTIN 385
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
E H H + + + +A +D+ I ++
Sbjct: 386 EAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 127 (49.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYM-GHSKAVRD 345
R + T+ GH V A+RF P G +LS G D +++WD+ G+C++T H+ +
Sbjct: 337 RCLATYIGHDNWVRAVRFHP-CGKFLLSVGDDKTIRVWDIAQ-GRCIKTINEAHTHFISC 394
Query: 346 ISFCNDGTKFLTASYDKNIKYW 367
+ FC T D IK W
Sbjct: 395 LDFCLHNPHIATGGVDDVIKVW 416
Score = 75 (31.5 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 30/114 (26%), Positives = 44/114 (38%)
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 532
P +L +LA S D I I+ L + GH + V F P G+F++
Sbjct: 308 PGGNLVGQCGYLATGSRDKTIKIWELATGRCL---ATYIGH--DNWVRAVRFHPCGKFLL 362
Query: 533 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
S + WD + +T+ I C L +AT G D +IK W
Sbjct: 363 SVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 244 (91.0 bits), Expect = 7.3e-18, P = 7.3e-18
Identities = 67/262 (25%), Positives = 119/262 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P + + GH V++++F P +G+L+ SA D V++W GK + H+ VR
Sbjct: 7 PHARAYRYVGHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGK-FSEFKAHTAPVR 64
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPDDDKQNILLA 401
+ F DG TAS DK+IK W + + +S + + V K +PD ++++
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPDG---RLIVS 119
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK I WD K+ + +G N + F + ++ D++++VW+ + ++
Sbjct: 120 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLL 179
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + IS HP+ N+L S D + I E + + GH G
Sbjct: 180 QHY-QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ---GH--TGPVFT 233
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V+FS G SG + + W
Sbjct: 234 VSFSKGGELFASGGADTQVLLW 255
Score = 219 (82.2 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 64/230 (27%), Positives = 102/230 (44%)
Query: 275 AKAANDHC---YIP-KR-LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS 329
A A+ D +IP KR + HT V ++ F G + +A D +K+W ++
Sbjct: 34 ASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSAD-GQFLATASEDKSIKVWSMYRQ 92
Query: 330 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVK 388
Y H+ VR F DG ++ S DK IK WDT Q + FS V
Sbjct: 93 RFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 151
Query: 389 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
NP I AG SD+ + WD+ ++ Q Y H G VN I+F + +T+S D
Sbjct: 152 FNPSGTC--IASAG-SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDG 208
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 498
+L++ + + + Y + H + ++S A+ D Q+L++ T
Sbjct: 209 TLKILDL-LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 257
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 50/237 (21%), Positives = 95/237 (40%)
Query: 323 IWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 382
+W+ + R Y+GH V + F G +AS D+ ++ W + F
Sbjct: 2 LWNFKPHARAYR-YVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 383 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFV 442
P V ++ D Q L DK I W M + +H V F + R V
Sbjct: 61 AP-VRSVDFSADGQ-FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 502
+ S+DK++++W+ + S+ + + +P+ +A+ D + ++ R
Sbjct: 119 SCSEDKTIKIWDTTNKQCVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 177
Query: 503 QLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
L + +G G C ++F P G ++++ +G D ++ TL+ H G
Sbjct: 178 LLQHYQVHSG----GVNC-ISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTG 229
Score = 155 (59.6 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 46/192 (23%), Positives = 85/192 (44%)
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
N+L + D+ + W + + E+ H V ++ F + + T+S+DKS++VW
Sbjct: 31 NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMY 90
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
+ Y H H + P+ + + S D I I+ T + +N F+ +
Sbjct: 91 RQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSDSV-- 144
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVA 575
G+A V+F+P G + S + WD + K+ + + H G + C +HP + +
Sbjct: 145 GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG-VNCISFHP-SGNYLI 202
Query: 576 TCGWDGLIKYWD 587
T DG +K D
Sbjct: 203 TASSDGTLKILD 214
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 244 (91.0 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 67/262 (25%), Positives = 119/262 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P + + GH V++++F P +G+L+ SA D V++W GK + H+ VR
Sbjct: 49 PHARAYRYVGHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGK-FSEFKAHTAPVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPDDDKQNILLA 401
+ F DG TAS DK+IK W + + +S + + V K +PD ++++
Sbjct: 107 SVDFSADGQFLATASEDKSIKVWSMYRQRFL--YSLYRHTHWVRCAKFSPDG---RLIVS 161
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK I WD K+ + +G N + F + ++ D++++VW+ + ++
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLL 221
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + IS HP+ N+L S D + I E + + GH G
Sbjct: 222 QHY-QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ---GH--TGPVFT 275
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V+FS G SG + + W
Sbjct: 276 VSFSKGGELFASGGADTQVLLW 297
Score = 219 (82.2 bits), Expect = 6.5e-15, P = 6.5e-15
Identities = 64/230 (27%), Positives = 102/230 (44%)
Query: 275 AKAANDHC---YIP-KR-LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS 329
A A+ D +IP KR + HT V ++ F G + +A D +K+W ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSAD-GQFLATASEDKSIKVWSMYRQ 134
Query: 330 GKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVK 388
Y H+ VR F DG ++ S DK IK WDT Q + FS V
Sbjct: 135 RFLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVD 193
Query: 389 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
NP I AG SD+ + WD+ ++ Q Y H G VN I+F + +T+S D
Sbjct: 194 FNPSGTC--IASAG-SDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDG 250
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYST 498
+L++ + + + Y + H + ++S A+ D Q+L++ T
Sbjct: 251 TLKILDL-LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRT 299
Score = 197 (74.4 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 57/268 (21%), Positives = 110/268 (41%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH ++++ P G + +A DT + +W+ + R Y+GH V + F
Sbjct: 14 FKGHKAAITSLDLSPN-GKQLATASWDTFLMLWNFKPHARAYR-YVGHKDVVTSVQFSPH 71
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
G +AS D+ ++ W + F P V ++ D Q L DK I W
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAP-VRSVDFSADGQ-FLATASEDKSIKVW 129
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
M + +H V F + R V+ S+DK++++W+ + S+ +
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS-VGF 188
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ +P+ +A+ D + ++ R L + +G G C ++F P G ++
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSG----GVNC-ISFHPSGNYL 243
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
++ +G D ++ TL+ H G
Sbjct: 244 ITASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 194 (73.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 59/256 (23%), Positives = 111/256 (43%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 392
R + GH A+ + +G + TAS+D + W+ + + R + V+ +P
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
N+L + D+ + W + + E+ H V ++ F + + T+S+DKS++V
Sbjct: 72 G---NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + Y H H + P+ + + S D I I+ T + +N F+
Sbjct: 129 WSMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNN---FSD 184
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 571
+ G+A V+F+P G + S + WD + K+ + + H G + C +HP
Sbjct: 185 SV--GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG-VNCISFHP-SG 240
Query: 572 SKVATCGWDGLIKYWD 587
+ + T DG +K D
Sbjct: 241 NYLITASSDGTLKILD 256
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 244 (91.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 80/280 (28%), Positives = 118/280 (42%)
Query: 271 PPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSG 330
P K + P +L SGH V I P AG D +KIWD+ SG
Sbjct: 147 PKKAPSIPKPKWHAPWKLSRVISGHLGWVRCIAVEPGNEWFATGAG-DRVIKIWDLA-SG 204
Query: 331 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVK 388
K + GH VR ++ + D+ +K WD E +VIR + G + Y +
Sbjct: 205 KLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYH-GHLSAVYSLA 263
Query: 389 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
L+P D +L D WDM TK H V ++ N + +T S D
Sbjct: 264 LHPTID---VLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDS 320
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKK 507
++R+W+ + ++ H S+ SI LHP+ A+ S DN I + E +F N
Sbjct: 321 TVRLWDLAAGKSVCTLTN-HKKSVRSIVLHPSLYMFASASPDN-IKQWRCPEGKFVQN-- 376
Query: 508 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
+GH + C S +G V GD G +FWDW++
Sbjct: 377 --ISGH-TSIVNCMAANS-EGVLVSGGDN-GTMFFWDWRT 411
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 46/177 (25%), Positives = 86/177 (48%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K VHT +GHT V+++ I++ D+ V++WD+ +GK + T H K+VR
Sbjct: 288 KANVHTLTGHTNTVASV-VAQATNPQIITGSHDSTVRLWDLA-AGKSVCTLTNHKKSVRS 345
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
I F +AS D NIK W G+ ++ S G V + + + +L++G +
Sbjct: 346 IVLHPSLYMFASASPD-NIKQWRCPEGKFVQNIS-GHTSIVNCMAANSE--GVLVSGGDN 401
Query: 406 KKIVQWDMNTKEITQEYDQHL--GAVNT------ITFVDNNRRFVTSSDDKSLRVWE 454
+ WD T Q + + G++++ + F + R +T+ DK+++V++
Sbjct: 402 GTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADKTIKVYK 458
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 248 (92.4 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 69/273 (25%), Positives = 123/273 (45%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H+ V+ ++ K ++++ G D KV +W + + Y GHS + ++F D ++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGIDSVTF--DASE 71
Query: 355 FLTAS--YDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQW 411
L A+ IK WD E +++RT + + + V +P + +G D + W
Sbjct: 72 VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE---FFASGSLDTNLKIW 128
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ K Y H VN + F + R V+ +D ++VW+ ++ H
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS-HEGQ 187
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ S+ HP+ LA S D + + E F+L G AG C ++F+PDG+ V
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWDL-ETFELIGS---GGPETAGVRC-LSFNPDGKTV 242
Query: 532 MSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIG 563
+ G E K + W+ ++CH+GV +G
Sbjct: 243 LCGLQESLKIFSWE--------PIRCHDGVDVG 267
Score = 200 (75.5 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 46/172 (26%), Positives = 84/172 (48%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
++V T +GH ++ F P +G S +DT +KIWD+ G C+ TY GH++ V +
Sbjct: 92 KIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKG-CIHTYKGHTRGVNVL 149
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDKQNILLAGMS 404
F DG ++ D +K WD G+++ F + G+I + +P + +L G +
Sbjct: 150 RFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL-DFHPHEF---LLATGSA 205
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
D+ + WD+ T E+ V ++F + + + + SL++ WE
Sbjct: 206 DRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFSWE 256
Score = 185 (70.2 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 47/190 (24%), Positives = 89/190 (46%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L+ G D K+ W + H ++++TF + + ++++W+
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ ++ H + S+ HP + A+ SLD + I+ R++ ++ K GH G
Sbjct: 91 AKIVRTLTG-HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---GH-TRG 145
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
+ F+PDGR+V+SG + WD + K+ K HEG ++HP E +AT
Sbjct: 146 VNV-LRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE-FLLATG 203
Query: 578 GWDGLIKYWD 587
D +K+WD
Sbjct: 204 SADRTVKFWD 213
Score = 184 (69.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/130 (31%), Positives = 68/130 (52%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K +HT+ GHT+GV+ +RF P G ++S G D VK+WD+ +GK + + H ++
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDL-TAGKLLTEFKSHEGQIQS 190
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGM 403
+ F T S D+ +K+WD ET ++I + T + + NPD +L G+
Sbjct: 191 LDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVR-CLSFNPDG---KTVLCGL 246
Query: 404 SDK-KIVQWD 412
+ KI W+
Sbjct: 247 QESLKIFSWE 256
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 243 (90.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 79/297 (26%), Positives = 133/297 (44%)
Query: 261 KDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTK 320
+D RS + P K + P +L SGHT V A+ P S G D
Sbjct: 150 EDNTTRS-LLPSKAPMMMKPKWHAPWKLYRVASGHTGWVRAVDVEPG-NQWFASGGADRI 207
Query: 321 VKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST 380
+KIWD+ SG+ + GH +VR + + DK +K WD E +VIR +
Sbjct: 208 IKIWDLA-SGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYH- 265
Query: 381 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRR 440
G + V L+ ++L+ D WDM TK + H V + + +
Sbjct: 266 GHLSAVQALSVHPSL-DVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQ 324
Query: 441 FVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
+T+S D ++R+W+ + ++ H S+ ++++HP N A+ S DN +
Sbjct: 325 VITASHDATVRLWDLAAGRSMCTLTH-HKKSVRALTIHPRLNMFASASPDNI-------K 376
Query: 501 RFQLNKKKRFAGHIVAGYACQVNF--SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+++L K + F ++ +G+ +N S D V+SG G FWDW+S F+ ++
Sbjct: 377 QWKLPKGE-FMQNL-SGHNAIINTLSSNDDGVVVSGADNGSLCFWDWRSGFCFQKIQ 431
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 240 (89.5 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 82/314 (26%), Positives = 137/314 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + L++SA D +K+WD + +G RT GH+ +V+DISF G
Sbjct: 105 SGHRSPVTRVIFHPVFS-LMVSASEDATIKVWD-YEAGDFERTLKGHTDSVQDISFDQTG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK +
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTMKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNT---NWLAAQSLDNQ-------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P + A +N+ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F P GRFV+S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 206 (77.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F + G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DQTGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK +K W+ TG ++TF TG +V + P+ D LLA S+ + V+
Sbjct: 203 NGDHIVSASRDKTMKMWEVATGYCVKTF-TGHREWVRMVRPNQD--GTLLASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 51/227 (22%), Positives = 95/227 (41%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDT----KVKIWDVFNSGKCMRTYMGHSKAVR 344
+ T GH VS++ P H++ ++ T +V + R ++ + +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 D---ISFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQN 397
D ++ C ND T + K K E V+ S P + + ++K++
Sbjct: 245 DGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKS 304
Query: 398 -----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
LL+G DK I WD++T H V + F R V+ +DDK+LR+
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRI 364
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
W++ +K +S H H + S+ H + ++ S+D + ++ R
Sbjct: 365 WDYKNKRCMKTLSA-HEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 243 (90.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 77/273 (28%), Positives = 118/273 (43%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P +L+ SGH V A+ P AG D +KIWD+ SG+ T GH VR
Sbjct: 190 PWKLMRVISGHLGWVRALAVEPDNKWFASGAG-DRTIKIWDLA-SGRLRLTLTGHISTVR 247
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAG 402
++ + + DK +K WD ET +VIR + G + Y + L+P D +L+ G
Sbjct: 248 GLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYH-GHLSGVYTLALHPTLD---VLVTG 303
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D WDM T+ H G V+ + + + + +T S D ++R+W+ +
Sbjct: 304 GRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMG 363
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQ 521
++ H + +++ HP T + A I + E F N F GH
Sbjct: 364 VLTH-HKKGVRALATHP-TEFTFASGSAGSIKQWKCPEGAFMQN----FEGHNSIINTLS 417
Query: 522 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 554
VN D SG G FWDWK+ F++L
Sbjct: 418 VN---DQNVFFSGADNGSMSFWDWKTGHRFQSL 447
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H SGHT VS + + +++ +D+ V++WD+ +GK M H K VR ++
Sbjct: 320 IHVLSGHTGTVSEL-VCQEADPQVITGSLDSTVRMWDLA-AGKTMGVLTHHKKGVRALA- 376
Query: 349 CNDGTKFLTASYDK-NIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
T+F AS +IK W G ++ F G + L+ +D QN+ +G +
Sbjct: 377 -THPTEFTFASGSAGSIKQWKCPEGAFMQNFE-GHNSIINTLSVND--QNVFFSGADNGS 432
Query: 408 IVQWDMNTKEITQEYD--------QHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+ WD T Q D Q + T TF + R + DK++++W+
Sbjct: 433 MSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIWK 487
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 46/214 (21%), Positives = 87/214 (40%)
Query: 373 QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTI 432
+++R S G + +V L + D + +G D+ I WD+ + + H+ V +
Sbjct: 192 KLMRVIS-GHLGWVRALAVEPDNK-WFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGL 249
Query: 433 TFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQ 492
+ + ++DK ++ W+ VI++ H+ + +++LHP + L D
Sbjct: 250 AVSPRHPYLFSCAEDKMVKCWDLETNKVIRHY-HGHLSGVYTLALHPTLDVLVTGGRDGV 308
Query: 493 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFR 552
++ R R ++ G V+ CQ P V++G + WD + K
Sbjct: 309 ARVWDMRTRSNIHVLSGHTG-TVSELVCQ-EADPQ---VITGSLDSTVRMWDLAAGKTMG 363
Query: 553 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
L H+ HP E + + G G IK W
Sbjct: 364 VLTHHKKGVRALATHPTEFTFAS--GSAGSIKQW 395
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 247 (92.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 71/272 (26%), Positives = 120/272 (44%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H+ V+ ++ K ++++ G D KV +W + + Y GHS + ++F D ++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY-GHSSGIDSVTF--DASE 71
Query: 355 FLTAS--YDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
L A+ IK WD E +V+RT TG V +N + +G D + WD
Sbjct: 72 GLVAAGAASGTIKLWDLEEAKVVRTL-TGHRSNCVSVNFHPFGE-FFASGSLDTNLKIWD 129
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
+ K Y H VN + F + R V+ +D ++VW+ ++ H +
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS-HEGKI 188
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 532
S+ HP+ LA S D + + E F+L G G C + F+PDG+ V+
Sbjct: 189 QSLDFHPHEFLLATGSADKTVKFWDL-ETFELIGS---GGTETTGVRC-LTFNPDGKSVL 243
Query: 533 SGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIG 563
G E K + W+ ++CH+GV +G
Sbjct: 244 CGLQESLKIFSWE--------PIRCHDGVDVG 267
Score = 216 (81.1 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 56/213 (26%), Positives = 99/213 (46%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
++V T +GH ++ F P +G S +DT +KIWD+ G C+ TY GH++ V +
Sbjct: 92 KVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKG-CIHTYKGHTRGVNVL 149
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDKQNILLAGMS 404
F DG ++ D +K WD G+++ F + GKI + +P + +L G +
Sbjct: 150 RFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL-DFHPHEF---LLATGSA 205
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE-----FGI 457
DK + WD+ T E+ V +TF + + + + SL++ WE G+
Sbjct: 206 DKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFSWEPIRCHDGV 264
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 490
V +S+ ++H + N N + +D
Sbjct: 265 DVGWSNLSDMNVHEGKLLGCSYNQNCVGVWVVD 297
Score = 194 (73.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/129 (33%), Positives = 67/129 (51%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K +HT+ GHT+GV+ +RF P G I+S G D VK+WD+ +GK + + H ++
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDL-TAGKLLHEFKSHEGKIQS 190
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F T S DK +K+WD ET ++I + T + NPD +L G+
Sbjct: 191 LDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKS---VLCGLQ 247
Query: 405 DK-KIVQWD 412
+ KI W+
Sbjct: 248 ESLKIFSWE 256
Score = 190 (71.9 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 47/190 (24%), Positives = 90/190 (47%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L+ G D K+ W + H ++++TF + + ++++W+
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 90
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
V++ ++ H + S++ HP + A+ SLD + I+ R++ ++ K GH G
Sbjct: 91 AKVVRTLTG-HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---GH-TRG 145
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
+ F+PDGR+++SG + WD + K+ K HEG ++HP E +AT
Sbjct: 146 VNV-LRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE-FLLATG 203
Query: 578 GWDGLIKYWD 587
D +K+WD
Sbjct: 204 SADKTVKFWD 213
Score = 186 (70.5 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 43/163 (26%), Positives = 76/163 (46%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH+ G+ ++ F G + A T +K+WD+ K +RT GH ++F G
Sbjct: 57 GHSSGIDSVTFDASEGLVAAGAASGT-IKLWDL-EEAKVVRTLTGHRSNCVSVNFHPFGE 114
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
F + S D N+K WD I T+ T + V++ PD +++G D + W
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN-VLRFTPDG---RWIVSGGEDNVVKVW 170
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
D+ ++ E+ H G + ++ F + T S DK+++ W+
Sbjct: 171 DLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWD 213
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 242 (90.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 76/300 (25%), Positives = 137/300 (45%)
Query: 293 SGHTKGVSAIRFFPKYG----HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
SGH K ++ + + P + + SA D +IWDV G+C+ GH+ AV + +
Sbjct: 201 SGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDV-KLGQCLMNIAGHTNAVTAVRW 259
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDK 406
G + T+S D+ +K W G + RTFS G +V + L+ D + + D+
Sbjct: 260 GGAGLIY-TSSKDRTVKMWRAADGILCRTFS-GHAHWVNNIALSTDYVLRTGPFHPVKDR 317
Query: 407 KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE 466
++T+E+ + + AV D V+ SDD +L +W ++ ++
Sbjct: 318 SKSHLSLSTEELQESALKRYQAVCP----DEVESLVSCSDDNTLYLWRNNQNKCVERMTG 373
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 526
H + + + P+ +A+ S D + ++ + + F GH+ A Y V +S
Sbjct: 374 -HQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYM---ATFRGHVQAVYT--VAWSA 427
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
D R ++SG + W ++ K+ + L H G +W P + S+VA+ G D +IK W
Sbjct: 428 DSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAP-DGSRVASGGKDKVIKLW 486
Score = 178 (67.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 312 ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET 371
++S D + +W N KC+ GH V D+ + D +AS+DK+++ W
Sbjct: 348 LVSCSDDNTLYLWRN-NQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASD 406
Query: 372 GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNT 431
GQ + TF G + V + D + ++++G D + W + TK++ QE H V
Sbjct: 407 GQYMATFR-GHVQAVYTVAWSADSR-LIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFG 464
Query: 432 ITFVDNNRRFVTSSDDKSLRVWEF 455
+ + + R + DK +++W +
Sbjct: 465 VDWAPDGSRVASGGKDKVIKLWAY 488
Score = 155 (59.6 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 73/311 (23%), Positives = 130/311 (41%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GH + V ++ F P HL +G DT V++WD+ N+ T GH + V +
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSG-DTTVRLWDL-NTETPHFTCTGHKQWVLCV 167
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL--NP---DDDKQNILLA 401
S+ DG + + +I WD ETGQ +G ++ L P D + + + A
Sbjct: 168 SWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASA 227
Query: 402 -GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
G D +I WD+ + H AV + + + TSS D+++++W ++
Sbjct: 228 SGDGDCRI--WDVKLGQCLMNIAGHTNAVTAVRWGGAGLIY-TSSKDRTVKMWRAADGIL 284
Query: 461 IKYISEPHMHSMPSISLHPN----TN-WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 515
+ S H H + +I+L + T + + L ST E Q + KR+
Sbjct: 285 CRTFSG-HAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEE-LQESALKRYQAVCP 342
Query: 516 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 575
V+ S D + + + KC V R + H+ V ++ P + +A
Sbjct: 343 DEVESLVSCSDDNTLYLWRNNQNKC---------VER-MTGHQNVVNDVKYSP-DVKLIA 391
Query: 576 TCGWDGLIKYW 586
+ +D ++ W
Sbjct: 392 SASFDKSVRLW 402
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 239 (89.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 74/301 (24%), Positives = 124/301 (41%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT GH V AI F YG + + D K+W +GKC T+ GH+ + ++F
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSA-ETGKCFYTFRGHTAEIVCLAF 185
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL--NPDDDKQNILLAGMSDK 406
T T S D K WD E+G+ + T + G ++ L N D+ L+ G D
Sbjct: 186 NPQSTLVATGSMDTTAKLWDVESGEEVSTLA-GHFAEIISLCFNTTGDR---LVTGSFDH 241
Query: 407 KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF-GIPVVIKYIS 465
+ WD+ + H G ++ + F + T+S DKS +VW+ G + +
Sbjct: 242 TAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLG 301
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 525
H + + + +A S D ++ST + FQ + GH G +V F+
Sbjct: 302 --HNDEVLDVCFNYTGQLIATASADGTSRVFST-DTFQC--LCQLEGH--KGEISKVCFN 354
Query: 526 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 585
G V++ + W K+ + L+ H C ++ E + T D +
Sbjct: 355 AQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFN-YEGDTIITGSKDNTCRI 413
Query: 586 W 586
W
Sbjct: 414 W 414
Score = 197 (74.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 76/288 (26%), Positives = 116/288 (40%)
Query: 305 FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND-GTKFLTASYDKN 363
F K G ++ D KIWD SG+ + T GH V I+F N G K T S+DK
Sbjct: 100 FNKSGSCFITGSYDRTCKIWDTA-SGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKT 158
Query: 364 IKYWDTETGQVIRTFSTGKIPYVVKL--NPDDDKQNILLAGMSDKKIVQWDMNTKEITQE 421
K W ETG+ TF G +V L NP + ++ G D WD+ + E
Sbjct: 159 CKLWSAETGKCFYTFR-GHTAEIVCLAFNP---QSTLVATGSMDTTAKLWDVESGEEVST 214
Query: 422 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPN 480
H + ++ F R VT S D + +W+ +P K ++ H + + + +
Sbjct: 215 LAGHFAEIISLCFNTTGDRLVTGSFDHTAILWD--VPSGRKVHVLSGHRGEISCVQFNWD 272
Query: 481 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM--SGDGEG 538
+ +A SLD ++ E Q GH V F+ G+ + S DG
Sbjct: 273 CSLIATASLDKSCKVWDA-EGGQC--LATLLGH--NDEVLDVCFNYTGQLIATASADGTS 327
Query: 539 KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
+ + D C L+ H+G I + S+V T D + W
Sbjct: 328 RVFSTDTFQCLC--QLEGHKGE-ISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 172 (65.6 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 48/171 (28%), Positives = 76/171 (44%)
Query: 284 IPK-RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
+P R VH SGH +S ++F LI +A +D K+WD G+C+ T +GH+
Sbjct: 248 VPSGRKVHVLSGHRGEISCVQFNWDCS-LIATASLDKSCKVWDA-EGGQCLATLLGHNDE 305
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 402
V D+ F G TAS D + + T+T Q + G + K+ + +L A
Sbjct: 306 VLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLE-GHKGEISKVCFNAQGSRVLTAS 364
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
+ DK W + T Q + H + + F +T S D + R+W
Sbjct: 365 V-DKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 162 (62.1 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 53/250 (21%), Positives = 101/250 (40%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLN-P 391
R H + +++F G+ F+T SYD+ K WDT +G+ + T + + Y + N P
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 392 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR 451
DK + G DK W T + + H + + F + T S D + +
Sbjct: 146 YGDK---VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAK 202
Query: 452 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
+W+ + ++ H + S+ + + L S D+ +++ +++
Sbjct: 203 LWDVESGEEVSTLAG-HFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHR 261
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 571
G I +C V F+ D + + + C WD + + TL H + ++ Q
Sbjct: 262 GEI----SC-VQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ 316
Query: 572 SKVATCGWDG 581
+AT DG
Sbjct: 317 L-IATASADG 325
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 61/294 (20%), Positives = 104/294 (35%)
Query: 302 IRFFPKYGHLILSAGMDTKVKIWDVFN--SGKCMRTYMGHSKAVRDI--SFCNDGTKFLT 357
IR++P L G + K D+ N + + +A + S C + K L
Sbjct: 8 IRYYPPGIFLDYEKGGQLRTKCIDLLNLTPETDVEELVLEIRAAEPLITSSCVEQVKLLI 67
Query: 358 ASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDMNTK 416
+ + D + R +P V N + + G D+ WD +
Sbjct: 68 CKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSG---SCFITGSYDRTCKIWDTASG 124
Query: 417 EITQEYDQHLGAVNTITFVDNNR---RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
E + H V I F NN + T S DK+ ++W Y H +
Sbjct: 125 EELHTLEGHRNVVYAIAF--NNPYGDKVATGSFDKTCKLWSAETGKCF-YTFRGHTAEIV 181
Query: 474 SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 533
++ +P + +A S+D ++ +++ AGH + F+ G +++
Sbjct: 182 CLAFNPQSTLVATGSMDTTAKLWDVESGEEVST---LAGHFAE--IISLCFNTTGDRLVT 236
Query: 534 GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + WD S + L H G I C + S +AT D K WD
Sbjct: 237 GSFDHTAILWDVPSGRKVHVLSGHRGE-ISCVQFNWDCSLIATASLDKSCKVWD 289
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 240 (89.5 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 63/262 (24%), Positives = 118/262 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P+ + GH +++++F P G+L+ SA D +++W GK + H+ VR
Sbjct: 49 PQARAFRYVGHKDVITSVQFSP-LGNLLASASRDRTIRLWIPDKRGKSSE-FKAHTAPVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV---KLNPDDDKQNILLA 401
+ F DG +AS DK+IK W+ + + +S + + V K +PD ++++
Sbjct: 107 SVDFSADGQFLASASEDKSIKVWNMYRQRFL--YSLYRHTHWVRCAKFSPDG---RLIVS 161
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
DK I WD K+ + +G N + F N ++ D ++++W+ + ++
Sbjct: 162 CSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLL 221
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + +S HP+ N+L S D + I E + + GH G
Sbjct: 222 QHY-QVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ---GH--TGPVFT 275
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V+FS G SG + + W
Sbjct: 276 VSFSKGGELFTSGGADAQVLLW 297
Score = 214 (80.4 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 60/218 (27%), Positives = 99/218 (45%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ HT V ++ F G + SA D +K+W+++ Y H+ VR F D
Sbjct: 98 FKAHTAPVRSVDFSAD-GQFLASASEDKSIKVWNMYRQRFLYSLYR-HTHWVRCAKFSPD 155
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
G ++ S DK IK WDT Q + FS G +V NP+ I AG SD +
Sbjct: 156 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVA-FNPNGTC--IASAG-SDHTVK 211
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 469
WD+ ++ Q Y H G VN ++F + +T+S D +L++ + + + Y + H
Sbjct: 212 IWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL-LEGRLIYTLQGHT 270
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 507
+ ++S + D Q+L++ T +LN K
Sbjct: 271 GPVFTVSFSKGGELFTSGGADAQVLLWRTNFD-ELNYK 307
Score = 208 (78.3 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 60/268 (22%), Positives = 114/268 (42%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH ++++ F P G + + DT + +W + + R Y+GH + + F
Sbjct: 14 FKGHKAAITSVDFSPN-GKQLATGSWDTFLMLWSLRPQARAFR-YVGHKDVITSVQFSPL 71
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
G +AS D+ I+ W + F P V ++ D Q L + DK I W
Sbjct: 72 GNLLASASRDRTIRLWIPDKRGKSSEFKAHTAP-VRSVDFSADGQ-FLASASEDKSIKVW 129
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+M + +H V F + R V+ S+DK++++W+ + S+ +
Sbjct: 130 NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSD-FVGF 188
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
++ +PN +A+ D+ + I+ R L + +G G C V+F P G ++
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSG----GVNC-VSFHPSGNYL 243
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
++ +G D ++ TL+ H G
Sbjct: 244 ITASSDGTLKILDLLEGRLIYTLQGHTG 271
Score = 193 (73.0 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 59/256 (23%), Positives = 108/256 (42%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPD 392
R + GH A+ + F +G + T S+D + W + R + V+ +P
Sbjct: 12 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSP- 70
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
N+L + D+ I W + + + E+ H V ++ F + + ++S+DKS++V
Sbjct: 71 --LGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKV 128
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W + Y H H + P+ + + S D I I+ T + +N F G
Sbjct: 129 WNMYRQRFL-YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQ 571
+A V F+P+G + S + WD + K+ + + H G + C +HP
Sbjct: 188 -----FANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG-VNCVSFHP-SG 240
Query: 572 SKVATCGWDGLIKYWD 587
+ + T DG +K D
Sbjct: 241 NYLITASSDGTLKILD 256
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 233 (87.1 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 40 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 97
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 98 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 153
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 154 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 212
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 213 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 272
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 273 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 329
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 330 VVTGSVDQTVKVWE 343
Score = 219 (82.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 120 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 177
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 178 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 237
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 297
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 298 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 208 (78.3 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 80 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 137
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 138 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 194
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 195 VWVVATKECKAELREHEHVVECISW 219
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 241 (89.9 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 67/260 (25%), Positives = 117/260 (45%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H+ VS++ G L+ + G D +V IW V + C+ + GH+ AV I F + +
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAV-SKPNCIMSLTGHTSAVGCIQFNSSEER 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +++ WD E +++RT K + +P + L +G D I WD+
Sbjct: 78 VVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGE---YLASGSVDSNIKLWDV 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE--PHMHS 471
K Y H AV + F + + ++SDD ++++W+ + K I+E H +
Sbjct: 135 RRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDL---IAGKMITEFTSHTSA 191
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ + HPN LA+ S D + ++ E+F + G G V F+PDG +
Sbjct: 192 VNVVQFHPNEYLLASGSADRTVKLWDL-EKFNMIGSSE--GE--TGVVRSVLFNPDGSCL 246
Query: 532 MSGDGEGKCWFWDWKSCKVF 551
SG E + W+ + F
Sbjct: 247 YSGS-ENTLRVYGWEPDRCF 265
Score = 219 (82.2 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 50/171 (29%), Positives = 91/171 (53%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH +S++ F P G + S +D+ +K+WDV G C+ Y GH++AVR +
Sbjct: 96 KILRTLMGHKASISSLDFHPM-GEYLASGSVDSNIKLWDVRRKG-CVFRYKGHTQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSD 405
+F DG +AS D +K WD G++I F++ VV+ +P++ +L +G +D
Sbjct: 154 AFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE---YLLASGSAD 210
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
+ + WD+ + + G V ++ F + + S++ +LRV WE
Sbjct: 211 RTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGWE 260
Score = 193 (73.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 54/206 (26%), Positives = 96/206 (46%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
+GHT V I+F ++ + + +++WD+ + K +RT MGH ++ + F G
Sbjct: 60 TGHTSAVGCIQFNSSEERVV-AGSLSGSLRLWDL-EAAKILRTLMGHKASISSLDFHPMG 117
Query: 353 TKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ- 410
+ S D NIK WD G V R + + +PD LA SD V+
Sbjct: 118 EYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGK----WLASASDDSTVKL 173
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
WD+ ++ E+ H AVN + F N + S D+++++W+ +I SE
Sbjct: 174 WDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGS-SEGETG 232
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIY 496
+ S+ +P+ + L + S +N + +Y
Sbjct: 233 VVRSVLFNPDGSCLYSGS-ENTLRVY 257
Score = 183 (69.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 50/190 (26%), Positives = 85/190 (44%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W ++ H AV I F + R V S SLR+W+
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H S+ S+ HP +LA+ S+D+ I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVF---RYKGHTQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + K+ H ++HP E +A+
Sbjct: 150 VRC-LAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D +K WD
Sbjct: 208 SADRTVKLWD 217
Score = 141 (54.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 39/130 (30%), Positives = 64/130 (49%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V + GHT+ V + F P G + SA D+ VK+WD+ +GK + + H+ AV
Sbjct: 137 KGCVFRYKGHTQAVRCLAFSPD-GKWLASASDDSTVKLWDLI-AGKMITEFTSHTSAVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGM 403
+ F + + S D+ +K WD E +I + S G+ V V NPD + L +G
Sbjct: 195 VQFHPNEYLLASGSADRTVKLWDLEKFNMIGS-SEGETGVVRSVLFNPDG---SCLYSGS 250
Query: 404 SDK-KIVQWD 412
+ ++ W+
Sbjct: 251 ENTLRVYGWE 260
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 239 (89.2 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 87/357 (24%), Positives = 155/357 (43%)
Query: 244 EKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIR 303
++ H + S +GKE+ G W+ + N + L+H H V +
Sbjct: 238 DRRRHDTEMSEENGKEK----GTDWLVGYNPSVQTN----LNIDLLHNLQ-HNSVVCCVN 288
Query: 304 FFP--KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA-----VRDISFCNDGTKFL 356
F KY L+ G + +I+DV ++GK + ++ S+ +R + F DG
Sbjct: 289 FSNDGKY----LATGCNRSAQIYDV-DTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLA 343
Query: 357 TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 416
T + DK +K WD T ++ TF ++ + L+ D + +++G DKK WD+
Sbjct: 344 TGAEDKTVKVWDIHTKKIQHTFYGHELD-IYSLDYSSDGR-FIVSGSGDKKAKIWDIEKG 401
Query: 417 EITQEY-DQHLGAVNTITFV---DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
+ ++ +G N +T V + R S D +R+W+ ++ E H+ S+
Sbjct: 402 KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY-EGHLDSV 460
Query: 473 PSISLHPNTNWLAAQSLDNQILIYS-TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
S++ P+ LA+ SLD + ++ + R + + F GH + V FSPDG ++
Sbjct: 461 YSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGH--KDFVLSVAFSPDGSWL 518
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK--VATCGWDGLIKYW 586
+SG + FWD ++ L+ H+ I P S AT D + W
Sbjct: 519 ISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 221 (82.9 bits), Expect = 6.0e-15, P = 6.0e-15
Identities = 63/257 (24%), Positives = 111/257 (43%)
Query: 299 VSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTA 358
+ ++ F P G+ + + D VK+WD+ ++ K T+ GH + + + +DG ++
Sbjct: 330 IRSVCFSPD-GNYLATGAEDKTVKVWDI-HTKKIQHTFYGHELDIYSLDYSSDGRFIVSG 387
Query: 359 SYDKNIKYWDTETGQVIRTFSTGKI-PY----VVKLNPDDDKQNILLAGMSDKKIVQWDM 413
S DK K WD E G+ T ++ P V ++PD ++ AG D + WD
Sbjct: 388 SGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDG---RLVAAGSLDNIVRLWDA 444
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG---IPVVIKYISEPHMH 470
T + Y+ HL +V ++ F + + + S DKSL++W+ + H
Sbjct: 445 QTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD 504
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDG 528
+ S++ P+ +WL + S D + + R GH V A + G
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWDPRNG---TTHMMLQGHKNSVISVALSPKNNSHG 561
Query: 529 RFVM-SGDGEGKCWFWD 544
F SGD + W +D
Sbjct: 562 VFATGSGDFRSRLWKYD 578
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 237 (88.5 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 65/262 (24%), Positives = 118/262 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
PK + GHT ++ + F P G L+ S+ D V++W G+ + H+ +VR
Sbjct: 49 PKARAFRFVGHTDVITGVNFAPS-GSLVASSSRDQTVRLWTPSIKGEST-VFKAHTASVR 106
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAG 402
+ F DG + +TAS DK++K W E + + + + T + + +PD L+A
Sbjct: 107 SVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVR-CARFSPDGR----LIAS 161
Query: 403 MSDKKIVQ-WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
D + V+ WD ++ + + + G+ + F + +S D ++++W+ +I
Sbjct: 162 CGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLI 221
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
++ + H + S HP+ N+L + S D+ I I E + GH G
Sbjct: 222 QHY-KVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYT---LHGH--KGPVLT 275
Query: 522 VNFSPDGRFVMSGDGEGKCWFW 543
V FS DG SG + + W
Sbjct: 276 VTFSRDGDLFASGGADSQVLMW 297
Score = 193 (73.0 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 63/296 (21%), Positives = 124/296 (41%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+ GH +S F P L + D + IW++ + R ++GH+ + ++F
Sbjct: 14 FKGHKDVISCADFNPNNKQLA-TGSCDKSLMIWNLAPKARAFR-FVGHTDVITGVNFAPS 71
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
G+ ++S D+ ++ W T + + T V ++ D Q ++ A DK + W
Sbjct: 72 GSLVASSSRDQTVRLW-TPSIKGESTVFKAHTASVRSVHFSRDGQRLVTAS-DDKSVKVW 129
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+ K+ ++H V F + R + DD+++R+W+ I ++ + S
Sbjct: 130 GVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTD-YGGS 188
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK-KRFAGHIVAGYACQVNFSPDGRF 530
+ + + +A+ DN I I+ R NK + + H AG C +F P G +
Sbjct: 189 ATFVDFNSSGTCIASSGADNTIKIWDIRT----NKLIQHYKVHN-AGVNC-FSFHPSGNY 242
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
++SG + D ++ TL H+G + + + A+ G D + W
Sbjct: 243 LISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSR-DGDLFASGGADSQVLMW 297
Score = 179 (68.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/170 (26%), Positives = 77/170 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K+ +++ + HT V RF P G LI S G D V++WD +S +C+ + + +
Sbjct: 134 KKFLYSLNRHTNWVRCARFSPD-GRLIASCGDDRTVRLWDT-SSHQCINIFTDYGGSATF 191
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F + GT ++ D IK WD T ++I+ + +P N L++G S
Sbjct: 192 VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSG---NYLISGSS 248
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
D I D+ + H G V T+TF + F + D + +W+
Sbjct: 249 DSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 156 (60.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 56/257 (21%), Positives = 105/257 (40%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS-TGKIPYVVKLNPD 392
R + GH + F + + T S DK++ W+ R F G + +N
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNL--APKARAFRFVGHTDVITGVN-F 68
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
+++ + D+ + W + K + + H +V ++ F + +R VT+SDDKS++V
Sbjct: 69 APSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKV 128
Query: 453 WEFGIP-VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
W G+ Y H + + P+ +A+ D + ++ T +N F
Sbjct: 129 W--GVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINI---FT 183
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLE 570
+ G A V+F+ G + S + WD ++ K+ + K H + C +HP
Sbjct: 184 DY--GGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAG-VNCFSFHPSG 240
Query: 571 QSKVATCGWDGLIKYWD 587
++ D IK D
Sbjct: 241 NYLISGSS-DSTIKILD 256
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 36/175 (20%), Positives = 73/175 (41%)
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 472
M + + + H ++ F NN++ T S DKSL +W P + H +
Sbjct: 5 MEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLA-PKARAFRFVGHTDVI 63
Query: 473 PSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 532
++ P+ + +A+ S D + +++ + + F H + V+FS DG+ ++
Sbjct: 64 TGVNFAPSGSLVASSSRDQTVRLWTPSIK---GESTVFKAHTAS--VRSVHFSRDGQRLV 118
Query: 533 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + W + K +L H + C + +A+CG D ++ WD
Sbjct: 119 TASDDKSVKVWGVERKKFLYSLNRHTN-WVRCARFSPDGRLIASCGDDRTVRLWD 172
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 233 (87.1 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 77/314 (24%), Positives = 141/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSAARDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SAARDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 205 (77.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 49/145 (33%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++A+ DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSAARDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 232 (86.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 77/314 (24%), Positives = 140/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVEDISFDHSG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ + +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 58/229 (25%), Positives = 106/229 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEV-QTGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFSTG-KIPY--VVKLNPDDDK 395
DGT + S D+ ++ W T + V+ S + Y + + + K
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++T H V + F + ++ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
RVW++ +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 363 RVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 208 (78.3 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 50/145 (34%), Positives = 75/145 (51%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVEDISF-DHSGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 260 VWVVATKECKAELREHEHVVECISW 284
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 224 (83.9 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 70/270 (25%), Positives = 129/270 (47%)
Query: 280 DHCY-IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMG 338
D+ Y IPK+ ++ GH+ V + G LSA D +++WD+ +G+ + ++G
Sbjct: 52 DNQYGIPKK---SFKGHSHIVQDVTISAD-GAYALSASWDRTLRLWDL-ETGETTQRFVG 106
Query: 339 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQ 396
H V +S + + ++AS DK +K W+T G+ + T TG +V V+++P D
Sbjct: 107 HKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATL-TGHNDWVSAVRISPSDQSS 164
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
++ A DK + WD+ + ++ H G ++ IT + ++ D + +W+
Sbjct: 165 TVISASW-DKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLN 223
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHIV 515
+ Y E + +++ PN WLAA + I I+ +ER L++ K FA
Sbjct: 224 KNKTL-YTLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELKPEFAVGAT 280
Query: 516 AG--YACQVNFSPDGRFVMSG--DGEGKCW 541
A A + +S DG+ + +G D + W
Sbjct: 281 AKDPEAISLAWSADGQNLFAGYTDNVIRVW 310
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS-----GKCMRTYMGHSKAVRD 345
T GH V+++ P + L+LS D + W + G +++ GHS V+D
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
++ DG L+AS+D+ ++ WD ETG+ + F G V+ ++ + + I+ A D
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRF-VGHKGDVLSVSIAKNLRQIVSASR-D 129
Query: 406 KKIVQWDM--NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG-IPVVIK 462
K + W+ ++ + AV I+ D + +++S DK+++ W+ V
Sbjct: 130 KTVKVWNTIGECMATLTGHNDWVSAVR-ISPSDQSSTVISASWDKTVKSWDLADYSVNAD 188
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 508
+I H + I+L P+ + A+ D I+++ LNK K
Sbjct: 189 FIG--HTGYISCITLSPDGSLCASAGKDGVIILWD------LNKNK 226
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/206 (25%), Positives = 85/206 (41%)
Query: 356 LTASYDKNIKYW------DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
L+ S DK + W D + G ++F G V + D L A D+ +
Sbjct: 34 LSGSRDKTLIKWKLTGGEDNQYGIPKKSFK-GHSHIVQDVTISADGAYALSASW-DRTLR 91
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 469
WD+ T E TQ + H G V +++ N R+ V++S DK+++VW +
Sbjct: 92 LWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHNDW 151
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S IS ++ + + S D + + + + +N F GH GY + SPDG
Sbjct: 152 VSAVRISPSDQSSTVISASWDKTVKSWDLAD-YSVNAD--FIGH--TGYISCITLSPDGS 206
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
S +G WD K TL+
Sbjct: 207 LCASAGKDGVIILWDLNKNKTLYTLE 232
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 49/221 (22%), Positives = 88/221 (39%)
Query: 374 VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ------EYDQHLG 427
V+R G +V L ++LL+G DK +++W + E Q + H
Sbjct: 8 VLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH 67
Query: 428 AVNTITFVDNNRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAA 486
V +T + +++S D++LR+W+ +++ H + S+S+ N + +
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG--HKGDVLSVSIAKNLRQIVS 125
Query: 487 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
S D + +++T GH A +++ S V+S + WD
Sbjct: 126 ASRDKTVKVWNTIGECMAT----LTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA 181
Query: 547 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
V H G I C + S A+ G DG+I WD
Sbjct: 182 DYSVNADFIGHTGY-ISCITLSPDGSLCASAGKDGVIILWD 221
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 224 (83.9 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 70/270 (25%), Positives = 129/270 (47%)
Query: 280 DHCY-IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMG 338
D+ Y IPK+ ++ GH+ V + G LSA D +++WD+ +G+ + ++G
Sbjct: 52 DNQYGIPKK---SFKGHSHIVQDVTISAD-GAYALSASWDRTLRLWDL-ETGETTQRFVG 106
Query: 339 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQ 396
H V +S + + ++AS DK +K W+T G+ + T TG +V V+++P D
Sbjct: 107 HKGDVLSVSIAKNLRQIVSASRDKTVKVWNT-IGECMATL-TGHNDWVSAVRISPSDQSS 164
Query: 397 NILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
++ A DK + WD+ + ++ H G ++ IT + ++ D + +W+
Sbjct: 165 TVISASW-DKTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLN 223
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHIV 515
+ Y E + +++ PN WLAA + I I+ +ER L++ K FA
Sbjct: 224 KNKTL-YTLEAKAE-VHALAFSPNRYWLAAATTSG-IKIFKLQERSLLDELKPEFAVGAT 280
Query: 516 AG--YACQVNFSPDGRFVMSG--DGEGKCW 541
A A + +S DG+ + +G D + W
Sbjct: 281 AKDPEAISLAWSADGQNLFAGYTDNVIRVW 310
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS-----GKCMRTYMGHSKAVRD 345
T GH V+++ P + L+LS D + W + G +++ GHS V+D
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
++ DG L+AS+D+ ++ WD ETG+ + F G V+ ++ + + I+ A D
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRF-VGHKGDVLSVSIAKNLRQIVSASR-D 129
Query: 406 KKIVQWDM--NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG-IPVVIK 462
K + W+ ++ + AV I+ D + +++S DK+++ W+ V
Sbjct: 130 KTVKVWNTIGECMATLTGHNDWVSAVR-ISPSDQSSTVISASWDKTVKSWDLADYSVNAD 188
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 508
+I H + I+L P+ + A+ D I+++ LNK K
Sbjct: 189 FIG--HTGYISCITLSPDGSLCASAGKDGVIILWD------LNKNK 226
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/206 (25%), Positives = 85/206 (41%)
Query: 356 LTASYDKNIKYW------DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
L+ S DK + W D + G ++F G V + D L A D+ +
Sbjct: 34 LSGSRDKTLIKWKLTGGEDNQYGIPKKSFK-GHSHIVQDVTISADGAYALSASW-DRTLR 91
Query: 410 QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHM 469
WD+ T E TQ + H G V +++ N R+ V++S DK+++VW +
Sbjct: 92 LWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTVKVWNTIGECMATLTGHNDW 151
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S IS ++ + + S D + + + + +N F GH GY + SPDG
Sbjct: 152 VSAVRISPSDQSSTVISASWDKTVKSWDLAD-YSVNAD--FIGH--TGYISCITLSPDGS 206
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
S +G WD K TL+
Sbjct: 207 LCASAGKDGVIILWDLNKNKTLYTLE 232
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 49/221 (22%), Positives = 88/221 (39%)
Query: 374 VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ------EYDQHLG 427
V+R G +V L ++LL+G DK +++W + E Q + H
Sbjct: 8 VLRGTLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSH 67
Query: 428 AVNTITFVDNNRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAA 486
V +T + +++S D++LR+W+ +++ H + S+S+ N + +
Sbjct: 68 IVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVG--HKGDVLSVSIAKNLRQIVS 125
Query: 487 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
S D + +++T GH A +++ S V+S + WD
Sbjct: 126 ASRDKTVKVWNTIGECMAT----LTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA 181
Query: 547 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
V H G I C + S A+ G DG+I WD
Sbjct: 182 DYSVNADFIGHTGY-ISCITLSPDGSLCASAGKDGVIILWD 221
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 231 (86.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 77/314 (24%), Positives = 140/314 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +++SA D +K+WD + +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD-YETGDFERTLKGHTDSVQDISFDHTG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + + S+D+++RVW + E H H
Sbjct: 219 WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNTNWLA-AQSLDNQ---------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P +++ +++ ++ L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V F G+F++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 209 (78.6 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ +TG ++TF TG +V + P+ D L+A S+ + V+
Sbjct: 203 NGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQD--GTLIASCSNDQTVR 259
Query: 411 -WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP 458
W + TKE E +H V I++ + + T S+ + G P
Sbjct: 260 VWVVATKECKAELREHEHVVECISWAPESS-YSTISEATGSETKKSGKP 307
Score = 128 (50.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 51/227 (22%), Positives = 95/227 (41%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDT----KVKIWDVFNSGKCMRTYMGHSKAVR 344
+ T GH VS++ P H++ ++ T +V+ + R ++ + +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244
Query: 345 D---ISFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFSTG-KIPY--VVKLNPDDDKQN 397
D I+ C ND T + K K E V+ S + Y + + + K++
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKS 304
Query: 398 -----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
LL+G DK I WD++T H V + F + ++ +DDK+LRV
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
W+F +K ++ H H + S+ H ++ S+D + ++ R
Sbjct: 365 WDFKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 233 (87.1 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 78/320 (24%), Positives = 128/320 (40%)
Query: 280 DHC----YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC--M 333
DHC IP V H V ++F G + +A D IW V + K
Sbjct: 204 DHCCGRDQIPSETVQILVAHKNEVWFVQF-SNSGKYLATASSDCTAIIWKVLDDNKVELK 262
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN--- 390
T H V +S+ D TK LT + +K WD +TG + TF + V
Sbjct: 263 HTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWF 322
Query: 391 PDDDKQNILLAGMSDKK--IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
PD + L+ G SD + IV WD + EI + V + + +T DK
Sbjct: 323 PDSTR---LVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDK 379
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 508
+R+ V + ISE + S+S+ + + +I ++ ++ +
Sbjct: 380 EIRILNLETKVE-RVISEEQ--PITSLSISGDGKFFIVNLSCQEIHLWDLAGEWK--QPL 434
Query: 509 RFAGHIVAGYACQVNFSP-DGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EW 566
+F+GH + Y + F D F+ SG + + + W+ K+ K L H + + C W
Sbjct: 435 KFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHS-MTVNCVSW 493
Query: 567 HPLEQSKVATCGWDGLIKYW 586
+P +A+ D I+ W
Sbjct: 494 NPKNPRMLASASDDQTIRIW 513
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 234 (87.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 79/322 (24%), Positives = 138/322 (42%)
Query: 274 DAKAANDH-C---YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS 329
D +DH C IP + HT V ++F G + S+ D IW++
Sbjct: 248 DLSLYSDHQCGKHQIPSQTAQILESHTDEVWFLQFSHN-GKYLASSSKDQTAIIWEISAD 306
Query: 330 G--KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKI-PYV 386
G T +GH K V I + D + LT ++ I+ WD ++G + + G I P
Sbjct: 307 GHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPIS 366
Query: 387 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD 446
PD Q I+ AGM+D+ I WD++ +E Q V+ I D+ + V+
Sbjct: 367 CGWYPDG--QGII-AGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCK 423
Query: 447 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 506
D + +++ V + I E M + S SL + ++ L+ +I +++ ++
Sbjct: 424 DSVISLFDREATVE-RLIEEEDM--ITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKI-- 478
Query: 507 KKRFAGHIVAGYACQVNFSPDGR-FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC- 564
R+ GH + + + F + F+ SG + + + W + K+ L H G + C
Sbjct: 479 VSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGA-VNCV 537
Query: 565 EWHPLEQSKVATCGWDGLIKYW 586
W P +A+ DG I+ W
Sbjct: 538 SWSPTNLHMLASASDDGTIRIW 559
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 222 (83.2 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 71/308 (23%), Positives = 135/308 (43%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P+ L T V A+RF G+ +L+ G D +K+W V + G ++TY GH V
Sbjct: 13 LPQHLWRTVDCQQGAVRAVRFNAD-GNYLLTCGSDKSLKLWSV-SRGTLLKTYSGHGYEV 70
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
D D ++ + S DK + WD +GQV R GK+ V+ N ++ ++L+
Sbjct: 71 LDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVN-CVQFN---EEATVMLS 126
Query: 402 GMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI-P 458
G D + WD ++ E Q D+ ++++ ++ +T S D +R ++ +
Sbjct: 127 GSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSEHE--LLTGSVDGRVRRYDLRMGQ 184
Query: 459 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
+ + YI P + + + + SLD+ + + L + ++GH+ GY
Sbjct: 185 LQVDYIGSP----ITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGE---YSGHVNKGY 237
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
+ V+S +G ++WD + L + V +HP E ++ T
Sbjct: 238 KLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEP-RLLT-S 295
Query: 579 WDGLIKYW 586
+G ++ W
Sbjct: 296 MEGRVQVW 303
Score = 189 (71.6 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 69/261 (26%), Positives = 116/261 (44%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 393
RT AVR + F DG LT DK++K W G +++T+S G Y V L+ D
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYS-GH-GYEV-LDADG 75
Query: 394 DKQNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
N L S DK ++ WD+ + ++T++ H G VN + F + ++ S D ++R
Sbjct: 76 SYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRC 135
Query: 453 WEFGI----PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 508
W+ P+ I S+ + S+ +S H L S+D ++ R+ L +
Sbjct: 136 WDTRSRRMEPIQILDESQDGISSL-KVSEHE----LLTGSVDGRV------RRYDLRMGQ 184
Query: 509 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--EGVCIGCEW 566
+I + C V FS DG+ +S + D + ++ H +G + C
Sbjct: 185 LQVDYIGSPITC-VCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCL 243
Query: 567 HPLEQSKVATCGWDGLIKYWD 587
+ + V +C DG + YWD
Sbjct: 244 TD-KDTHVLSCSEDGHVYYWD 263
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 232 (86.7 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 77/309 (24%), Positives = 138/309 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSK 341
K++ +GH+K ++A+ + P + + + S+ D V++WD +G+C RT GH++
Sbjct: 190 KQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDT-TAGRCERTLTGHAQ 248
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
+V + + DG + +AS D+ IK W G + RT G +V + D L
Sbjct: 249 SVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWVNTMALSTDYA--LRT 304
Query: 402 GMSDKKIVQWDMNTKEIT---QEYDQH-LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
G + + +N +++ QE + L N + R V+ SDD +L +W
Sbjct: 305 GAFEP--AEASVNAQDLRGSLQELKERALSRYNLVRG-QGPERLVSGSDDFTLFLWSPAE 361
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
H + + P++ +A+ S D I ++ R L + GH+ A
Sbjct: 362 DKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLR---GHVAAV 418
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
Y Q+ +S D R ++SG + WD K+ K+ L H +W P + +VA+
Sbjct: 419 Y--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP-DGQRVASG 475
Query: 578 GWDGLIKYW 586
G D ++ W
Sbjct: 476 GKDKCLRIW 484
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 71/305 (23%), Positives = 122/305 (40%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF-- 348
T GH V +I + P G + S + ++ +WD + R GHSK + +S+
Sbjct: 152 TCQGHRHWVLSISWSPD-GKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEP 210
Query: 349 --CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
N +++ ++S D +++ WDT G+ RT TG V L D +L + D
Sbjct: 211 LHANPECRYVASSSKDGSVRVWDTTAGRCERTL-TGHAQSVTCLRWGGD--GLLYSASQD 267
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ I W + + + H VNT+ + + + V + ++ +
Sbjct: 268 RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELK 327
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK--RFAGHIVAGYACQVN 523
E + S ++ L + S D + ++S E +KK R GH QV
Sbjct: 328 ERAL-SRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKPLARMTGH--QALINQVV 380
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGL 582
FSPD R + S + WD ++ K +L+ H W S++ G D
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA--DSRLLVSGSSDST 438
Query: 583 IKYWD 587
+K WD
Sbjct: 439 LKVWD 443
Score = 155 (59.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 66/311 (21%), Positives = 129/311 (41%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GH++ V ++ F P G + S DT V+ WD+ T GH V I
Sbjct: 106 RCTSSLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTETPHF-TCQGHRHWVLSI 163
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN----ILLAG 402
S+ DG K + + I WD TG+ + TG ++ L+ + N + +
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASS 223
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D + WD + H +V + + + + ++S D++++VW V+ +
Sbjct: 224 SKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCR 282
Query: 463 YISEPHMHSMPSISLHPNTNWL----AAQSLDNQILIYSTRERFQLNKKKRFAGH-IVAG 517
+ + H H + +++L +T++ A + + + R Q K++ + + +V G
Sbjct: 283 TL-QGHGHWVNTMAL--STDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRG 339
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 576
P+ R V SG + + W + K + H+ + + P + +A+
Sbjct: 340 QG------PE-RLV-SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSP-DSRVIAS 390
Query: 577 CGWDGLIKYWD 587
+D IK WD
Sbjct: 391 ASFDKSIKLWD 401
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 231 (86.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 76/280 (27%), Positives = 124/280 (44%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
+ P +L +GH V + P ++ DT +K+WD+ +GK T GH
Sbjct: 126 HAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLA-TGKLKTTLAGHVMT 184
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILL 400
VRD++ + + S DK +K WD E Q+IR + G + V V ++P D I
Sbjct: 185 VRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYY-GHLSGVRTVSIHPTLDL--IAT 241
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
AG D I WDM T+ H G +N + + + V+SS D ++R+W+
Sbjct: 242 AGR-DSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKT 300
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+K ++ H S+ + +LHP +A+ D+ I + E L F G
Sbjct: 301 MKVLTH-HKRSVRATALHPKEFSVASACTDD-IRSWGLAEGSLLTN---FESE-KTGIIN 354
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 560
++ + D GD G F+D+KS +++L E V
Sbjct: 355 TLSINQDDVLFAGGDN-GVLSFYDYKSGHKYQSLATREMV 393
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 47/201 (23%), Positives = 87/201 (43%)
Query: 387 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD 446
V ++P D++ + G +D + WD+ T ++ H+ V + D + + S+
Sbjct: 145 VAIDPVDNEW--FITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSE 202
Query: 447 DKSLRVWEFGIPVVIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 505
DK+++ W+ +I+ Y H+ + ++S+HP + +A D+ I ++ R R +
Sbjct: 203 DKTVKCWDLEKNQIIRDYYG--HLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPVI 260
Query: 506 KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 565
GH G QV +P V+S + WD + K + L H+
Sbjct: 261 T---LVGH--KGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATA 315
Query: 566 WHPLEQSKVATCGWDGLIKYW 586
HP E S + C D I+ W
Sbjct: 316 LHPKEFSVASACTDD--IRSW 334
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 46/196 (23%), Positives = 87/196 (44%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V T GH ++ ++ P ++S+ D V++WDV +GK M+ H ++VR +
Sbjct: 259 VITLVGHKGPINQVQCTP-VDPQVVSSSTDATVRLWDVV-AGKTMKVLTHHKRSVRATAL 316
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
+A D +I+ W G ++ F + K + L+ + D ++L AG + +
Sbjct: 317 HPKEFSVASACTD-DIRSWGLAEGSLLTNFESEKTGIINTLSINQD--DVLFAGGDNGVL 373
Query: 409 VQWDMNTKE-----ITQEYDQHLGAVNTI---TFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+D + T+E L ++ TF R +T DKS+++W+
Sbjct: 374 SFYDYKSGHKYQSLATREMVGSLEGERSVLCSTFDKTGLRLITGEADKSIKIWKQDETAT 433
Query: 461 IKYISEPHMHSMPSIS 476
+ SEP + P++S
Sbjct: 434 KE--SEPGLAWNPNLS 447
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 236 (88.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 57/205 (27%), Positives = 103/205 (50%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GHT V F P+ +L+LS D+ +++W + + C+ TY GH V D+ F G
Sbjct: 448 GHTGPVYRCAFAPEM-NLLLSCSEDSTIRLWSLL-TWSCVVTYRGHVYPVWDVRFAPHGY 505
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQW 411
F++ SYDK + W T++ Q +R F G + V V+ +P+ N + G SD+ + W
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVF-VGHLSDVDCVQFHPNS---NYVATGSSDRTVRLW 561
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D T + + H G+V+++ F R + S D ++ +W+ ++ + H +
Sbjct: 562 DNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR-HTST 620
Query: 472 MPSISLHPNTNWLAAQSLDNQILIY 496
+ +I+ + LAA LDN + ++
Sbjct: 621 VTTITFSRDGTVLAAAGLDNNLTLW 645
Score = 195 (73.7 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
Identities = 55/194 (28%), Positives = 88/194 (45%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V T+ GH V +RF P +G+ +S D ++W +S + +R ++GH V + F
Sbjct: 485 VVTYRGHVYPVWDVRFAP-HGYYFVSCSYDKTARLWAT-DSNQALRVFVGHLSDVDCVQF 542
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
+ T S D+ ++ WD TGQ +R TG V L L +G D I
Sbjct: 543 HPNSNYVATGSSDRTVRLWDNMTGQSVRLM-TGHKGSVSSL-AFSACGRYLASGSVDHNI 600
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
+ WD++ + +H V TITF + + D +L +W+F V YIS H
Sbjct: 601 IIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFH-KVTEDYISN-H 658
Query: 469 MHSMPSISLHPNTN 482
+ ++S H + N
Sbjct: 659 I----TVSHHQDEN 668
Score = 180 (68.4 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 56/231 (24%), Positives = 97/231 (41%)
Query: 359 SYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 416
S D N++ D +G+V R+ TG + Y P+ N+LL+ D I W + T
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPV-YRCAFAPE---MNLLLSCSEDSTIRLWSLLTW 482
Query: 417 EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 476
Y H+ V + F + FV+ S DK+ R+W ++ + H+ + +
Sbjct: 483 SCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALR-VFVGHLSDVDCVQ 541
Query: 477 LHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 536
HPN+N++A S D + ++ + + GH G + FS GR++ SG
Sbjct: 542 FHPNSNYVATGSSDRTVRLW---DNMTGQSVRLMTGH--KGSVSSLAFSACGRYLASGSV 596
Query: 537 EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ WD + + TL H + + + +A G D + WD
Sbjct: 597 DHNIIIWDLSNGSLVTTLLRHTSTVTTITFSR-DGTVLAAAGLDNNLTLWD 646
Score = 154 (59.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 50/229 (21%), Positives = 98/229 (42%)
Query: 318 DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRT 377
D V++ D SG+ R+ MGH+ V +F + L+ S D I+ W T + T
Sbjct: 429 DINVRMLDD-RSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVT 487
Query: 378 FSTGKIP-YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVD 436
+ P + V+ P ++ DK W ++ + + + HL V+ + F
Sbjct: 488 YRGHVYPVWDVRFAPHG---YYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHP 544
Query: 437 NNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
N+ T S D+++R+W+ ++ ++ H S+ S++ +LA+ S+D+ I+I+
Sbjct: 545 NSNYVATGSSDRTVRLWDNMTGQSVRLMTG-HKGSVSSLAFSACGRYLASGSVDHNIIIW 603
Query: 497 STRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 545
+ R + + FS DG + + + WD+
Sbjct: 604 DLSNGSLVTTLLRHTSTVTT-----ITFSRDGTVLAAAGLDNNLTLWDF 647
Score = 45 (20.9 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 9 DEKEDELDKPENQNDQNPDSAALES----SPPHILPS--KSAAPQVDDTTLALTVAQARQ 62
+E++D+ D P+ + P L S S P+ PS + P++ D+ L + R+
Sbjct: 295 EEEDDDPDAPDRPKKKKPKKDPLLSKKSKSDPNA-PSIDRIPLPELKDSDKLLKLKALRE 353
Query: 63 TQSR 66
R
Sbjct: 354 ASKR 357
>ZFIN|ZDB-GENE-040426-1110 [details] [associations]
symbol:strap "serine/threonine kinase receptor
associated protein" species:7955 "Danio rerio" [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1110 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016301 HSSP:P16649
GeneTree:ENSGT00630000089849 EMBL:BX649476 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG
OrthoDB:EOG4CRM0M EMBL:BC049525 EMBL:BC065428 IPI:IPI00506790
RefSeq:NP_956598.1 UniGene:Dr.12320 STRING:Q7ZW92 DNASU:393274
Ensembl:ENSDART00000013224 Ensembl:ENSDART00000124627 GeneID:393274
KEGG:dre:393274 InParanoid:Q7ZW92 NextBio:20814331 Uniprot:Q7ZW92
Length = 329
Score = 223 (83.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 76/299 (25%), Positives = 134/299 (44%)
Query: 291 TWSGHTKGVSAIRF--FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
T SGHT+ V + F YG+ ++SA D K + ++G + T++GH AV +
Sbjct: 9 TCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQG-DTGDWIGTFLGHKGAVWGATL 67
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
+ TK TA+ D K WD TG + T + I V D N LL G +DK +
Sbjct: 68 NTEATKAATAAADFTAKVWDAVTGDEVLTLAHKHIVKSVNFTQDS---NYLLTGGNDKVL 124
Query: 409 VQWDMNTKEIT-QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+D++ E QE H A+ + +N+++ ++++DDK++R+W+ +K +S
Sbjct: 125 RIYDLSKPEAEPQEIAGHTSAIKKALWCNNDQQILSAADDKTIRLWDKNTNEAVKTLSFD 184
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
S+ S+ P+ L + I Y+ L K I + + PD
Sbjct: 185 A--SVSSMEYIPDGETLVI-TYGRTIAFYNAHS-LDLIKTVDAPASIHSA-----SLHPD 235
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
F ++G + K + +D+ + + + K H G + C + A+ DG ++ W
Sbjct: 236 KDFFVAGGDDFKLYKYDYTTKEEMESYKGHFGP-VHCVRFSPDGELYASGSEDGTLRLW 293
Score = 182 (69.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 42/165 (25%), Positives = 82/165 (49%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
+GHT + + ILSA D +++WD N+ + ++T + +V + + DG
Sbjct: 140 AGHTSAIKKA-LWCNNDQQILSAADDKTIRLWDK-NTNEAVKT-LSFDASVSSMEYIPDG 196
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ L +Y + I +++ + +I+T + L+PD D +AG D K+ ++D
Sbjct: 197 -ETLVITYGRTIAFYNAHSLDLIKTVDAPASIHSASLHPDKD---FFVAGGDDFKLYKYD 252
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
TKE + Y H G V+ + F + + + S+D +LR+W+ +
Sbjct: 253 YTTKEEMESYKGHFGPVHCVRFSPDGELYASGSEDGTLRLWQTAV 297
Score = 182 (69.1 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 61/246 (24%), Positives = 106/246 (43%)
Query: 314 SAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ 373
+A D K+WD + + + H V+ ++F D LT DK ++ +D +
Sbjct: 76 TAAADFTAKVWDAVTGDEVLT--LAHKHIVKSVNFTQDSNYLLTGGNDKVLRIYDLSKPE 133
Query: 374 VIRTFSTGKIPYVVK-LNPDDDKQNILLAGMSDKKIVQWDMNTKEI--TQEYDQHLGAVN 430
G + K L ++D+Q +L+ DK I WD NT E T +D +V+
Sbjct: 134 AEPQEIAGHTSAIKKALWCNNDQQ--ILSAADDKTIRLWDKNTNEAVKTLSFD---ASVS 188
Query: 431 TITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLD 490
++ ++ + V + +++ + +IK + P S+ S SLHP+ ++ A D
Sbjct: 189 SMEYIPDGETLVITYG-RTIAFYNAHSLDLIKTVDAPA--SIHSASLHPDKDFFVAGGDD 245
Query: 491 NQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV 550
++ Y + ++ K GH + C V FSPDG SG +G W K
Sbjct: 246 FKLYKYDYTTKEEMESYK---GHFGPVH-C-VRFSPDGELYASGSEDGTLRLWQTAVGKT 300
Query: 551 FRTLKC 556
+ KC
Sbjct: 301 YGLWKC 306
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/204 (19%), Positives = 93/204 (45%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H V ++ F +L L+ G D ++I+D+ + GH+ A++ +CN+ +
Sbjct: 99 HKHIVKSVNFTQDSNYL-LTGGNDKVLRIYDLSKPEAEPQEIAGHTSAIKKALWCNNDQQ 157
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN 414
L+A+ DK I+ WD T + ++T S ++ PD + ++ G + I ++ +
Sbjct: 158 ILSAADDKTIRLWDKNTNEAVKTLSFDASVSSMEYIPDGETL-VITYG---RTIAFYNAH 213
Query: 415 TKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS 474
+ ++ + D ++++ + + FV DD L +++ ++ + H +
Sbjct: 214 SLDLIKTVDAP-ASIHSASLHPDKDFFVAGGDDFKLYKYDYTTKEEMESY-KGHFGPVHC 271
Query: 475 ISLHPNTNWLAAQSLDNQILIYST 498
+ P+ A+ S D + ++ T
Sbjct: 272 VRFSPDGELYASGSEDGTLRLWQT 295
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 233 (87.1 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 59/197 (29%), Positives = 97/197 (49%)
Query: 266 RSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWD 325
R W KD + + + T+ GHT GV ++F +++ + DT +KIWD
Sbjct: 319 RPWKEVYKDRFKVGTNWKYGRCSIKTFKGHTNGVMCLQF---EDNILATGSYDTTIKIWD 375
Query: 326 VFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY 385
+G+ +RT GH +R + F D TK ++ S D+ IK W+ TG+ I T+ TG
Sbjct: 376 T-ETGEELRTLRGHESGIRCLQF--DDTKLISGSMDRTIKVWNWRTGECISTY-TGHRGG 431
Query: 386 VVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSS 445
V+ L+ D +IL +G DK + W+ K T H VN + ++R ++S
Sbjct: 432 VIGLHFD---ASILASGSVDKTVKIWNFEDKS-TFSLRGHTDWVNAVRVDTSSRTVFSAS 487
Query: 446 DDKSLRVWEFGIPVVIK 462
DD ++R+W+ I+
Sbjct: 488 DDCTVRLWDLDTKTCIR 504
Score = 184 (69.8 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 72/292 (24%), Positives = 123/292 (42%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH G+ ++F ++S MD +K+W+ + +G+C+ TY GH V + F
Sbjct: 382 LRTLRGHESGIRCLQFDDTK---LISGSMDRTIKVWN-WRTGECISTYTGHRGGVIGLHF 437
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSDKK 407
D + + S DK +K W+ E TFS G +V + D + + A D
Sbjct: 438 --DASILASGSVDKTVKIWNFEDKS---TFSLRGHTDWVNAVRVDTSSRTVFSAS-DDCT 491
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVT-----SSDDKSLRVWEFGIPVVIK 462
+ WD++TK + + H+G V + + F +DD S + P +
Sbjct: 492 VRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQA 551
Query: 463 YIS-EPHM-HSMPSI--SLHPN-----TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ EP+ +S S + N ++ +LD+ I ++ T L + F GH
Sbjct: 552 SMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCL---RTFFGH 608
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG--VCIG 563
+ +A D ++SG + WD ++ K RT H G CIG
Sbjct: 609 LEGVWA----LGADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIG 656
Score = 178 (67.7 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 57/189 (30%), Positives = 85/189 (44%)
Query: 270 APPKDA-KAANDHCYIPKRLVHTWS-GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVF 327
+PP K +D + KR H S G GV F K + + K+ +
Sbjct: 278 SPPSGKRKLEDDEVAVVKR--HCSSLGSDAGVDKDSDFFKTRYRPWKEVYKDRFKVGTNW 335
Query: 328 NSGKC-MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 386
G+C ++T+ GH+ V + F + T SYD IK WDTETG+ +RT G +
Sbjct: 336 KYGRCSIKTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTLR-GHESGI 392
Query: 387 VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD 446
L DD K L++G D+ I W+ T E Y H G V + F + + S
Sbjct: 393 RCLQFDDTK---LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DASILASGSV 447
Query: 447 DKSLRVWEF 455
DK++++W F
Sbjct: 448 DKTVKIWNF 456
Score = 130 (50.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 356 LTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 415
+T++ D I+ W+T TG+ +RTF G + V L D + +++G D+ I WD T
Sbjct: 583 VTSALDSTIRLWETTTGRCLRTFF-GHLEGVWALGADTLR---IVSGAEDRMIKIWDPRT 638
Query: 416 KEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF 455
+ + + H G V I D+ RF T S+D +R++ F
Sbjct: 639 GKCERTFTGHSGPVTCIGLGDS--RFATGSEDCEVRMYSF 676
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 220 (82.5 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 75/308 (24%), Positives = 130/308 (42%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P++ + T V A+RF G+ L+ G D +K+W+ G +RTY GH V
Sbjct: 13 LPQKRMKTLDCSQGAVRAVRFNVD-GNYCLTCGSDKTLKLWNPLR-GTLLRTYSGHGYEV 70
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
D + D + + DK + WD TGQV+R F GK+ V+ N ++ ++L+
Sbjct: 71 LDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVN-TVQFN---EEATVILS 126
Query: 402 GMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
G D + WD ++ E Q D+ ++++ D+ + S D +R ++ +
Sbjct: 127 GSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--ILAGSVDGRVRRYDLRMGQ 184
Query: 460 VIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
V Y+ P + + SLD+ + + ++ +L + + GH Y
Sbjct: 185 VSSDYVGSP----ITCTCFSRDGQCTLISSLDSTLRLLD-KDTGELLGE--YVGHKNQQY 237
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
S V+S +GK +FWD + L V +HP E + G
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEPCLLTAMG 297
Query: 579 WDGLIKYW 586
G I+YW
Sbjct: 298 --GSIQYW 303
Score = 182 (69.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 63/260 (24%), Positives = 116/260 (44%)
Query: 331 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 390
K M+T AVR + F DG LT DK +K W+ G ++RT+S G V+
Sbjct: 16 KRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAA 74
Query: 391 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
D + L +G DK +V WD+ T ++ +++ H G VNT+ F + ++ S D S+
Sbjct: 75 GSFDNSH-LCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSV 133
Query: 451 RVWEFGI--PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 508
R W+ P ++ + E + S+ + + + A S+D ++ R+ L +
Sbjct: 134 RCWDCRSRKPEPVQTLDEAR-DGISSVKVSDHE--ILAGSVDGRV------RRYDLRMGQ 184
Query: 509 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 568
+ ++ + C FS DG+ + + D + ++ H+ +
Sbjct: 185 VSSDYVGSPITCTC-FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCL 243
Query: 569 LEQ-SKVATCGWDGLIKYWD 587
E+ + V +C DG + +WD
Sbjct: 244 SERDTHVVSCSEDGKVFFWD 263
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 220 (82.5 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 74/308 (24%), Positives = 130/308 (42%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P++ + T V A+RF G+ L+ G D +K+W+ G +RTY GH V
Sbjct: 13 LPRKQLKTLDCGQGAVRAVRFNVD-GNYCLTCGSDKTLKLWNPLR-GTLLRTYSGHGYEV 70
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
D + D + + DK + WD TGQV+R F GK+ V+ N ++ ++L+
Sbjct: 71 LDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVN-TVQFN---EEATVILS 126
Query: 402 GMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI-P 458
G D + WD ++ E Q D+ ++++ D+ + S D +R ++ +
Sbjct: 127 GSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--ILAGSVDGRVRRYDLRMGQ 184
Query: 459 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
V Y+ P + + SLD+ + + ++ +L + + GH Y
Sbjct: 185 VTSDYVGSP----ITCTCFSRDGQCTLISSLDSTLRLLD-KDTGELLGE--YVGHKNQKY 237
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
S V+S +GK +FWD + L V +HP + + G
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADPCLLTAMG 297
Query: 579 WDGLIKYW 586
G I+YW
Sbjct: 298 --GSIQYW 303
Score = 178 (67.7 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 60/249 (24%), Positives = 112/249 (44%)
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSH-LCS 84
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI--PV 459
G DK +V WD+ T ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPE 144
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
++ + E + S+ + + + A S+D ++ R+ L + + ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--ILAGSVDGRV------RRYDLRMGQVTSDYVGSPIT 195
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 578
C FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCS 254
Query: 579 WDGLIKYWD 587
DG + +WD
Sbjct: 255 EDGKVFFWD 263
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 220 (82.5 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 68/264 (25%), Positives = 123/264 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V ++ GH+ V G LSA D +++WDV +G+ + ++GH V +
Sbjct: 58 VRSFKGHSHIVQDCTLTAD-GAYALSASWDKTLRLWDVA-TGETYQRFVGHKSDVMSVDI 115
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNP----DDDKQNILLAG 402
+ ++ S DK IK W T GQ + T G +V V++ P DDD I+ AG
Sbjct: 116 DKKASMIISGSRDKTIKVW-TIKGQCLATL-LGHNDWVSQVRVVPNEKADDDSVTIISAG 173
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
+DK + W++N +I ++ H +NT+T + ++ D + +W +
Sbjct: 174 -NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY 232
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHIVAG--YA 519
+S + S++ PN WLAA + I ++S ++ ++ + FAG+ A +A
Sbjct: 233 TLSA--QDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHA 289
Query: 520 CQVNFSPDGRFVMSG--DGEGKCW 541
+ +S DG+ + +G D + W
Sbjct: 290 VSLAWSADGQTLFAGYTDNVIRVW 313
Score = 180 (68.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 51/218 (23%), Positives = 104/218 (47%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNS----GKCMRTYMGHSKAVRDI 346
T GH V+++ +L+LSA D + W + G +R++ GHS V+D
Sbjct: 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDC 71
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+ DG L+AS+DK ++ WD TG+ + F G V+ ++ D K +++++G DK
Sbjct: 72 TLTADGAYALSASWDKTLRLWDVATGETYQRF-VGHKSDVMSVDIDK-KASMIISGSRDK 129
Query: 407 KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRR------FVTSSDDKSLRVWEFG-IPV 459
I W + + + H V+ + V N + +++ +DK ++ W +
Sbjct: 130 TIKVWTIKGQCLATLLG-HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI 188
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 497
+I H ++ +++ P+ +A+ D +I++++
Sbjct: 189 EADFIG--HNSNINTLTASPDGTLIASAGKDGEIMLWN 224
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 229 (85.7 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 75/304 (24%), Positives = 145/304 (47%)
Query: 294 GHTKGVSAIRFFPKY----GH-LILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
GH K ++++ + P + GH + SA D+ V+IWDV S + GH +V + +
Sbjct: 232 GHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVI-SKRADIVLSGHKGSVTCVRW 290
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG--KIPYVVKLNPDDDKQNILLAGMSDK 406
G K T+S+D+ IK W+++TG +I+T S ++ ++ L+ D IL D
Sbjct: 291 GGTG-KIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLA-LSTDF----ILRTAYHDH 344
Query: 407 --KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW--EFGIPVVIK 462
K+ + D + + ++ + +N V+ + V++SDD ++ +W E V +
Sbjct: 345 TGKVPESDADKVAMAKKRFEKAATINN-KIVE---KLVSASDDFTMYLWDPESSSKPVAR 400
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ H + ++ P+ ++A+ DN + +++ R+ + + GH+ A Y C
Sbjct: 401 LLG--HQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLR---GHVGAVYQCC- 454
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGL 582
FS D R ++S + W+ ++ K+ L H+ +W P + KV + G D
Sbjct: 455 -FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSP-DGQKVGSGGKDKA 512
Query: 583 IKYW 586
I+ W
Sbjct: 513 IRIW 516
Score = 206 (77.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 69/303 (22%), Positives = 136/303 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
+GH + + A F P ++S D+ +IWD ++G + T GH+ V +S+ +G
Sbjct: 145 AGHGEAILATSFSPVSSSTMVSGSGDSTARIWDC-DTGTPLHTLKGHTSWVLAVSYSPNG 203
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL--NPDDDKQN---ILLAGMSDKK 407
T S D ++ WD + GQ + G + ++ L P +Q+ L + D
Sbjct: 204 AMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDST 263
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+ WD+ +K H G+V + + + + TSS D++++VW +I+ +S
Sbjct: 264 VRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIY-TSSHDRTIKVWNSQTGTLIQTLSA- 321
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQI--LIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 525
H H + ++L +T+++ + + + S ++ + KKRF A +N
Sbjct: 322 HAHRVNHLAL--STDFILRTAYHDHTGKVPESDADKVAM-AKKRFEK------AATINNK 372
Query: 526 PDGRFVMSGDGEGKCWFWDWKSC-KVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 584
+ V + D + + WD +S K L H+ + P + + +A+ G+D +K
Sbjct: 373 IVEKLVSASD-DFTMYLWDPESSSKPVARLLGHQKEVNHVTFSP-DMAYIASAGFDNHVK 430
Query: 585 YWD 587
W+
Sbjct: 431 LWN 433
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 64/308 (20%), Positives = 121/308 (39%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYM-GHSKAVRDIS 347
+HT GHT V A+ + P G +I + MD V+IWD G+ + + GH K + ++
Sbjct: 184 LHTLKGHTSWVLAVSYSPN-GAMIATGSMDNTVRIWDA-KKGQALGAPLKGHVKWITSLA 241
Query: 348 F-----CNDG-TKFLTASYDKNIKYWD--TETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 399
+ G + +AS D ++ WD ++ ++ + G + V+ +
Sbjct: 242 WEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVT-CVRWGGTGK----I 296
Query: 400 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
D+ I W+ T + Q H VN + + + T+ D + +V E
Sbjct: 297 YTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLA-LSTDFILRTAYHDHTGKVPESDADK 355
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
V +++ +I+ + L + S D + ++ + R GH
Sbjct: 356 VA--MAKKRFEKAATIN-NKIVEKLVSASDDFTMYLWDPESSSK--PVARLLGH--QKEV 408
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
V FSPD ++ S + W+ + K TL+ H G C + + + +
Sbjct: 409 NHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSA-DSRLLVSSSK 467
Query: 580 DGLIKYWD 587
D +K W+
Sbjct: 468 DTTLKVWN 475
>UNIPROTKB|Q5E959 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9913 "Bos taurus" [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849
EMBL:BT021061 EMBL:BC119959 IPI:IPI00698102 RefSeq:NP_001015567.1
UniGene:Bt.17089 ProteinModelPortal:Q5E959 STRING:Q5E959
PRIDE:Q5E959 Ensembl:ENSBTAT00000018840 GeneID:510201
KEGG:bta:510201 CTD:11171 HOGENOM:HOG000174258 HOVERGEN:HBG055228
InParanoid:Q5E959 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
NextBio:20869325 Uniprot:Q5E959
Length = 350
Score = 222 (83.2 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 78/299 (26%), Positives = 132/299 (44%)
Query: 291 TWSGHTKGVSAIRF--FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
T SGHT+ V + F YG+ ++SA D K + ++G + T++GH AV +
Sbjct: 9 TCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQG-DTGDWIGTFLGHKGAVWGATL 67
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D TK TA+ D K WD +G + T + I V D N LL G DK +
Sbjct: 68 NKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDS---NYLLTGGQDKLL 124
Query: 409 VQWDMNTKEIT-QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+D+N E +E H + + +++ + S+DDK++R+W+ +K ++
Sbjct: 125 RIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDKTVRLWDHATMTEVKSLNF- 182
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
+M S+ S+ P L + I +S L+ K F A + P+
Sbjct: 183 NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLDPIKSFEAPATINSA---SLHPE 234
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
FV++G + K + +D+ S + + K H G I C + A+ DG ++ W
Sbjct: 235 KEFVVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFSPDGELYASGSEDGTLRLW 292
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 67/270 (24%), Positives = 109/270 (40%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T+ GH KG K +A D K+WD + + M + H V+ + F
Sbjct: 52 IGTFLGH-KGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMT--LAHKHIVKTVDF 108
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDKQNILLAGMSDKK 407
D LT DK ++ +D + +G + K L +DKQ IL A DK
Sbjct: 109 TQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSA--DDKT 165
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV-VIKYISE 466
+ WD T + + ++ +V+++ ++ V + +S+ + + + IK
Sbjct: 166 VRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHSAVSLDPIKSFEA 222
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 526
P ++ S SLHP ++ A D ++ Y +L K GH C V FSP
Sbjct: 223 PA--TINSASLHPEKEFVVAGGEDFKLYKYDYNSGEELESYK---GHF-GPIHC-VRFSP 275
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 556
DG SG +G W K + KC
Sbjct: 276 DGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 225 (84.3 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 80/314 (25%), Positives = 137/314 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V+ + F P + +I+SA D +K+WD +G RT GH+ +V+DISF + G
Sbjct: 105 SGHRSPVTRVIFHPVFS-VIVSASEDATIKVWD-HETGDFERTLKGHTDSVQDISFDHTG 162
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQ 410
+ S D IK WD + + IRT G V V + P+ D +++ DK I
Sbjct: 163 KLLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH---IVSASRDKTIKM 218
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W++ T + + H V + + +SS+D+++RVW + E H H
Sbjct: 219 WEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE-HEH 277
Query: 471 SMPSISLHPNT---NWLAAQSLDNQ-------ILIYSTRER----FQLNKKK---RFAGH 513
+ IS P + L A + + L+ +R++ + ++ GH
Sbjct: 278 VVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGH 337
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 573
+ V P G++++S + WD+K+ + +TL HE ++H
Sbjct: 338 --DNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPY- 394
Query: 574 VATCGWDGLIKYWD 587
V T D +K W+
Sbjct: 395 VVTGSVDQTVKVWE 408
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 57/229 (24%), Positives = 104/229 (45%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T GH VS++ P H++ SA D +K+W+V +G C++T+ GH + VR +
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIV-SASRDKTIKMWEVA-TGYCVKTFTGHREWVRMVRP 242
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQ----------VIRTFS---TGKIPYVVKLNPDDDK 395
DGT ++S D+ ++ W T + V+ S P +++ + K
Sbjct: 243 NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 396 QN-----ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
++ LL+G DK I WD++ H V + + V+ +DDK+L
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTL 362
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
R+W++ K +S H H + S+ H ++ S+D + ++ R
Sbjct: 363 RIWDYKNKRCTKTLSA-HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 205 (77.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 47/144 (32%), Positives = 73/144 (50%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T GHT V I F G L+ S D +K+WD F +C+RT GH V ++
Sbjct: 145 TLKGHTDSVQDISF-DHTGKLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVAIMP 202
Query: 351 DGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
+G ++AS DK IK W+ TG ++TF TG +V + P+ D ++ + +D+ +
Sbjct: 203 NGDHIVSASRDKTIKMWEVATGYCVKTF-TGHREWVRMVRPNQDG-TLIASSSNDQTVRV 260
Query: 411 WDMNTKEITQEYDQHLGAVNTITF 434
W + TKE E +H V I++
Sbjct: 261 WVVATKECKAELREHEHVVECISW 284
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 41/167 (24%), Positives = 73/167 (43%)
Query: 254 TFHGKEEKDYQGRSWVAPPKDAKAA-NDHCYIPKRLVHTW---SGHTKGVSAI----RFF 305
T D R WV K+ KA +H ++ + + +W S H + A +
Sbjct: 247 TLIASSSNDQTVRVWVVATKECKAELREHEHVVECI--SWAPESAHPTILEATGSETKKS 304
Query: 306 PKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIK 365
K G +LS D +K+WDV + G C+ T +GH VR + G ++ + DK ++
Sbjct: 305 GKPGPFLLSGSRDKTIKMWDV-SIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLR 363
Query: 366 YWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
WD + + +T S + +V L+ ++ G D+ + W+
Sbjct: 364 IWDYKNKRCTKTLSAHE-HFVTSLDFHKTAPYVV-TGSVDQTVKVWE 408
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 226 (84.6 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 73/295 (24%), Positives = 122/295 (41%)
Query: 262 DYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKV 321
D + S + P + + P +L+ SGH V ++ P AG D +
Sbjct: 109 DDKPTSLIQRPSATRQQPPEWHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAG-DRTI 167
Query: 322 KIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTG 381
KIW++ +G T GH VR ++ + DK +K WD ET +VIR + G
Sbjct: 168 KIWNLA-TGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYH-G 225
Query: 382 KIP--YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ Y + L+P + ++L+ G D WDM T+ H G V + + +
Sbjct: 226 HLSGVYTLALHP---RLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADP 282
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
+ +T S D ++R+W+ + ++ H + S++ HP A+ S +
Sbjct: 283 QVITGSLDATVRLWDLAAGKTMGVLTH-HKKGIRSLATHPREFTFASASTGSIKQWKCPG 341
Query: 500 ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 554
F N F GH VN + + SG G FWDWK+ ++T+
Sbjct: 342 GEFMQN----FEGHNAIINTLSVN---EDNVLFSGGDNGSMSFWDWKTGYRYQTI 389
Score = 146 (56.5 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 46/174 (26%), Positives = 81/174 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H SGHT V+ ++ + +++ +D V++WD+ +GK M H K +R ++
Sbjct: 262 IHVLSGHTGTVADVQC-QEADPQVITGSLDATVRLWDLA-AGKTMGVLTHHKKGIRSLAT 319
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
F +AS +IK W G+ ++ F G + L+ ++D N+L +G + +
Sbjct: 320 HPREFTFASASTG-SIKQWKCPGGEFMQNFE-GHNAIINTLSVNED--NVLFSGGDNGSM 375
Query: 409 VQWDMNTKEITQEYDQ-----HLGA---VNTITFVDNNRRFVTSSDDKSLRVWE 454
WD T Q D L A + T TF R +T DK+++VW+
Sbjct: 376 SFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTGLRLITGEADKTIKVWK 429
Score = 138 (53.6 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 60/258 (23%), Positives = 92/258 (35%)
Query: 331 KCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN 390
K MR GH VR ++ + F + + D+ IK W+ TG +R TG I V L
Sbjct: 134 KLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATG-ALRLTLTGHISTVRGLA 192
Query: 391 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
+ G DK + WD+ T ++ + Y HL V T+ VT D
Sbjct: 193 VSPRHPYLFSCG-EDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVA 251
Query: 451 RVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRF 510
RVW+ I +S H ++ + + SLD + ++ K
Sbjct: 252 RVWDMRTRSNIHVLSG-HTGTVADVQCQEADPQVITGSLDATVRLWD----LAAGKTMGV 306
Query: 511 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
H G + F + G K WK C ++ EG +
Sbjct: 307 LTHHKKGIRSLATHPREFTFASASTGSIK----QWK-CPGGEFMQNFEGHNAIINTLSVN 361
Query: 571 QSKVATCGWD-GLIKYWD 587
+ V G D G + +WD
Sbjct: 362 EDNVLFSGGDNGSMSFWD 379
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 229 (85.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 55/172 (31%), Positives = 89/172 (51%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F DG +A+ D +K WD G+++ F TG + VV+ +P++ +L +G S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE---YLLASGSS 209
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
D+ I WD+ ++ + G V +I F + + D SLRV WE
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 216 (81.1 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 66/269 (24%), Positives = 116/269 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 191
Query: 474 S--ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ HPN LA+ S D I + E+FQ+ G G + F+PDG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDL-EKFQV--VSCIEGE--PGPVRSILFNPDGCCL 246
Query: 532 MSGDGEG-KCWFWDWKSCKVFRTLKCHEG 559
SG + + + W+ + C F + H G
Sbjct: 247 YSGCQDSLRVYGWEPERC--FDVVLVHWG 273
Score = 194 (73.4 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 293 SGHTKGVSAIRF-FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+GHT V ++R P+ LI++ +++WD+ + K +RT MGH + + F
Sbjct: 60 TGHTSPVESVRLNTPE--ELIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPY 116
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S D NIK WD G V R + ++ +PD L + D +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKL 173
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS-EP 467
WD+ ++ E+ H G VN + F N + S D+++R W+ V+ I EP
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Score = 168 (64.2 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + K+ H G E+HP E +A+
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D I++WD
Sbjct: 208 SSDRTIRFWD 217
Score = 146 (56.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/129 (30%), Positives = 61/129 (47%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V + GH++ V +RF P G + SA D VK+WD+ +GK M + GH+ V
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVKLWDL-TAGKMMSEFPGHTGPVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F + + S D+ I++WD E QV+ P + NPD L +G
Sbjct: 195 VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGC---CLYSGCQ 251
Query: 405 DK-KIVQWD 412
D ++ W+
Sbjct: 252 DSLRVYGWE 260
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 226 (84.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 77/309 (24%), Positives = 137/309 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSK 341
K++ T +GH+K ++ + + P + + + S+ D V+IWD +G+C R GH++
Sbjct: 189 KQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDT-TAGRCERILTGHTQ 247
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
+V + + DG + +AS D+ IK W G + RT G +V + D L
Sbjct: 248 SVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWVNTMALSTDYA--LRT 303
Query: 402 GMSDKKIVQWDMNTKEIT---QEYDQH-LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
G + + +N +++ QE + L N + R V+ SDD +L +W
Sbjct: 304 GAFEP--AEASVNPQDLQGSLQELKERALSRYNLVRG-QGPERLVSGSDDFTLFLWSPAE 360
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
H + + P++ +A+ S D I ++ R L + GH+ A
Sbjct: 361 DKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR---GHVAAV 417
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
Y Q+ +S D R ++SG + WD K+ K+ L H +W P + +VA+
Sbjct: 418 Y--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP-DGQRVASG 474
Query: 578 GWDGLIKYW 586
G D ++ W
Sbjct: 475 GKDKCLRIW 483
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 72/305 (23%), Positives = 122/305 (40%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF-- 348
T GH V +I + P G + S + ++ +WD + RT GHSK + +S+
Sbjct: 151 TCKGHRHWVLSISWSPD-GRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEP 209
Query: 349 --CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
N +++ ++S D +++ WDT G+ R TG V L D +L + D
Sbjct: 210 LHANPECRYVASSSKDGSVRIWDTTAGRCERIL-TGHTQSVTCLRWGGD--GLLYSASQD 266
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ I W + + + H VNT+ + + + V + ++ +
Sbjct: 267 RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELK 326
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK--RFAGHIVAGYACQVN 523
E + S ++ L + S D + ++S E +KK R GH QV
Sbjct: 327 ERAL-SRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKPLTRMTGH--QALINQVL 379
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGL 582
FSPD R V S + WD ++ K +L+ H W S++ G D
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA--DSRLLVSGSSDST 437
Query: 583 IKYWD 587
+K WD
Sbjct: 438 LKVWD 442
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 73/313 (23%), Positives = 131/313 (41%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GH++ V ++ F P G + S DT V+ WD+ T GH V I
Sbjct: 105 RCTSSLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSI 162
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETG-QVIRTFSTGKIPYVVKLNPDDDKQN----ILLA 401
S+ DG K + + I WD TG QV RT + G ++ L+ + N + +
Sbjct: 163 SWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLA-GHSKWITGLSWEPLHANPECRYVAS 221
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
D + WD + H +V + + + + ++S D++++VW V+
Sbjct: 222 SSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLC 280
Query: 462 KYISEPHMHSMPSISLHPN----TNWL--AAQSLDNQILIYSTRERFQLNKKKRFAGHIV 515
+ + + H H + +++L + T A S++ Q L S +E L ++ ++V
Sbjct: 281 RTL-QGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQE---LKERALSRYNLV 336
Query: 516 AGYACQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKV 574
G P+ R V SG + + W + K + H+ + + P + V
Sbjct: 337 RGQG------PE-RLV-SGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP-DSRIV 387
Query: 575 ATCGWDGLIKYWD 587
A+ +D IK WD
Sbjct: 388 ASASFDKSIKLWD 400
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 228 (85.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/172 (31%), Positives = 89/172 (51%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F DG +A+ D +K WD G+++ F TG + VV+ +P++ +L +G S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE---YLLASGSS 209
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
D+ I WD+ ++ + G V ++ F + + D SLRV WE
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 215 (80.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 64/258 (24%), Positives = 112/258 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 191
Query: 474 S--ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ HPN LA+ S D I + E+FQ+ G G V F+PDG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDL-EKFQV--VSCIEGE--PGPVRSVLFNPDGCCL 246
Query: 532 MSGDGEG-KCWFWDWKSC 548
SG + + + W+ + C
Sbjct: 247 YSGCQDSLRVYGWEPERC 264
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 293 SGHTKGVSAIRF-FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+GHT V ++R P+ LI++ +++WD+ + K +RT MGH + + F
Sbjct: 60 TGHTSPVESVRLNTPE--ELIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPY 116
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S D NIK WD G V R + ++ +PD L + D +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKL 173
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS-EP 467
WD+ ++ E+ H G VN + F N + S D+++R W+ V+ I EP
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + K+ H G E+HP E +A+
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D I++WD
Sbjct: 208 SSDRTIRFWD 217
Score = 147 (56.8 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V + GH++ V +RF P G + SA D VK+WD+ +GK M + GH+ V
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVKLWDL-TAGKMMSEFPGHTGPVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F + + S D+ I++WD E QV+ P V NPD L +G
Sbjct: 195 VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC---CLYSGCQ 251
Query: 405 DK-KIVQWD 412
D ++ W+
Sbjct: 252 DSLRVYGWE 260
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/210 (20%), Positives = 85/210 (40%)
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQ 410
G T D + W I + + P V+LN ++ +++AG I
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE---LIVAGSQSGSIRV 89
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHM 469
WD+ +I + H + ++ F + S D ++++W+ V +Y H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHS 147
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
++ + P+ WLA+ + D+ + ++ +++ F GH G V F P+
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE---FPGH--TGPVNVVEFHPNEY 202
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+ SG + FWD + F+ + C EG
Sbjct: 203 LLASGSSDRTIRFWDLEK---FQVVSCIEG 229
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 228 (85.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/172 (31%), Positives = 89/172 (51%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F DG +A+ D +K WD G+++ F TG + VV+ +P++ +L +G S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE---YLLASGSS 209
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
D+ I WD+ ++ + G V ++ F + + D SLRV WE
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 215 (80.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 64/258 (24%), Positives = 112/258 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 191
Query: 474 S--ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ HPN LA+ S D I + E+FQ+ G G V F+PDG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDL-EKFQV--VSCIEGE--PGPVRSVLFNPDGCCL 246
Query: 532 MSGDGEG-KCWFWDWKSC 548
SG + + + W+ + C
Sbjct: 247 YSGCQDSLRVYGWEPERC 264
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 293 SGHTKGVSAIRF-FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+GHT V ++R P+ LI++ +++WD+ + K +RT MGH + + F
Sbjct: 60 TGHTSPVESVRLNTPE--ELIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPY 116
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S D NIK WD G V R + ++ +PD L + D +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKL 173
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS-EP 467
WD+ ++ E+ H G VN + F N + S D+++R W+ V+ I EP
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + K+ H G E+HP E +A+
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D I++WD
Sbjct: 208 SSDRTIRFWD 217
Score = 147 (56.8 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V + GH++ V +RF P G + SA D VK+WD+ +GK M + GH+ V
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVKLWDL-TAGKMMSEFPGHTGPVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F + + S D+ I++WD E QV+ P V NPD L +G
Sbjct: 195 VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC---CLYSGCQ 251
Query: 405 DK-KIVQWD 412
D ++ W+
Sbjct: 252 DSLRVYGWE 260
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/210 (20%), Positives = 85/210 (40%)
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQ 410
G T D + W I + + P V+LN ++ +++AG I
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE---LIVAGSQSGSIRV 89
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHM 469
WD+ +I + H + ++ F + S D ++++W+ V +Y H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHS 147
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
++ + P+ WLA+ + D+ + ++ +++ F GH G V F P+
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE---FPGH--TGPVNVVEFHPNEY 202
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+ SG + FWD + F+ + C EG
Sbjct: 203 LLASGSSDRTIRFWDLEK---FQVVSCIEG 229
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 228 (85.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/172 (31%), Positives = 89/172 (51%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F DG +A+ D +K WD G+++ F TG + VV+ +P++ +L +G S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE---YLLASGSS 209
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
D+ I WD+ ++ + G V ++ F + + D SLRV WE
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 215 (80.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 64/258 (24%), Positives = 112/258 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 191
Query: 474 S--ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ HPN LA+ S D I + E+FQ+ G G V F+PDG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDL-EKFQV--VSCIEGE--PGPVRSVLFNPDGCCL 246
Query: 532 MSGDGEG-KCWFWDWKSC 548
SG + + + W+ + C
Sbjct: 247 YSGCQDSLRVYGWEPERC 264
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 293 SGHTKGVSAIRF-FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+GHT V ++R P+ LI++ +++WD+ + K +RT MGH + + F
Sbjct: 60 TGHTSPVESVRLNTPE--ELIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPY 116
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S D NIK WD G V R + ++ +PD L + D +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKL 173
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS-EP 467
WD+ ++ E+ H G VN + F N + S D+++R W+ V+ I EP
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + K+ H G E+HP E +A+
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D I++WD
Sbjct: 208 SSDRTIRFWD 217
Score = 147 (56.8 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V + GH++ V +RF P G + SA D VK+WD+ +GK M + GH+ V
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVKLWDL-TAGKMMSEFPGHTGPVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F + + S D+ I++WD E QV+ P V NPD L +G
Sbjct: 195 VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC---CLYSGCQ 251
Query: 405 DK-KIVQWD 412
D ++ W+
Sbjct: 252 DSLRVYGWE 260
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/210 (20%), Positives = 85/210 (40%)
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQ 410
G T D + W I + + P V+LN ++ +++AG I
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE---LIVAGSQSGSIRV 89
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHM 469
WD+ +I + H + ++ F + S D ++++W+ V +Y H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHS 147
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
++ + P+ WLA+ + D+ + ++ +++ F GH G V F P+
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE---FPGH--TGPVNVVEFHPNEY 202
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+ SG + FWD + F+ + C EG
Sbjct: 203 LLASGSSDRTIRFWDLEK---FQVVSCIEG 229
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 228 (85.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 54/172 (31%), Positives = 89/172 (51%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F DG +A+ D +K WD G+++ F TG + VV+ +P++ +L +G S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE---YLLASGSS 209
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
D+ I WD+ ++ + G V ++ F + + D SLRV WE
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 215 (80.7 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 64/258 (24%), Positives = 112/258 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 191
Query: 474 S--ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ HPN LA+ S D I + E+FQ+ G G V F+PDG +
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDL-EKFQV--VSCIEGE--PGPVRSVLFNPDGCCL 246
Query: 532 MSGDGEG-KCWFWDWKSC 548
SG + + + W+ + C
Sbjct: 247 YSGCQDSLRVYGWEPERC 264
Score = 194 (73.4 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 293 SGHTKGVSAIRF-FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+GHT V ++R P+ LI++ +++WD+ + K +RT MGH + + F
Sbjct: 60 TGHTSPVESVRLNTPE--ELIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPY 116
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S D NIK WD G V R + ++ +PD L + D +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKL 173
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS-EP 467
WD+ ++ E+ H G VN + F N + S D+++R W+ V+ I EP
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Score = 168 (64.2 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + K+ H G E+HP E +A+
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D I++WD
Sbjct: 208 SSDRTIRFWD 217
Score = 147 (56.8 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V + GH++ V +RF P G + SA D VK+WD+ +GK M + GH+ V
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVKLWDL-TAGKMMSEFPGHTGPVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F + + S D+ I++WD E QV+ P V NPD L +G
Sbjct: 195 VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGC---CLYSGCQ 251
Query: 405 DK-KIVQWD 412
D ++ W+
Sbjct: 252 DSLRVYGWE 260
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 44/210 (20%), Positives = 85/210 (40%)
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQ 410
G T D + W I + + P V+LN ++ +++AG I
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE---LIVAGSQSGSIRV 89
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHM 469
WD+ +I + H + ++ F + S D ++++W+ V +Y H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHS 147
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
++ + P+ WLA+ + D+ + ++ +++ F GH G V F P+
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE---FPGH--TGPVNVVEFHPNEY 202
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+ SG + FWD + F+ + C EG
Sbjct: 203 LLASGSSDRTIRFWDLEK---FQVVSCIEG 229
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 224 (83.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 81/320 (25%), Positives = 143/320 (44%)
Query: 275 AKAANDHCYIPKR--LVHT-WSGHTKGVSAIRFFPKY----GHLILSAGMDTKVKIWDVF 327
+K+ C+ PK+ L + +GH K ++ I + P + +++ D +IWD+
Sbjct: 170 SKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDI- 228
Query: 328 NSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 387
K + GH+ AV + + DG + T S D IK W+T G++IR G ++
Sbjct: 229 TLKKSIICLSGHTLAVTCVKWGGDGIIY-TGSQDCTIKMWETTQGKLIRELK-GHGHWIN 286
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
L + +L G D Q+ N +E + L N T D+ R V+ SDD
Sbjct: 287 SLALSTEY--VLRTGAFDHTGRQYPPN-----EEKQKALERYNK-TKGDSPERLVSGSDD 338
Query: 448 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS-TRERFQLNK 506
++ +WE + K H + + P+ W+A+ S D + +++ +F
Sbjct: 339 FTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTV- 397
Query: 507 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEW 566
F GH+ G QV++S D R ++SG + W+ ++ K+ + L H +W
Sbjct: 398 ---FRGHV--GPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDW 452
Query: 567 HPLEQSKVATCGWDGLIKYW 586
P + KV + G D ++K W
Sbjct: 453 SP-DGEKVVSGGKDRVLKLW 471
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 36/143 (25%), Positives = 74/143 (51%)
Query: 312 ILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTET 371
++S D + +W+ S + + GH + V + F DG +AS+DK+++ W+ T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 372 GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNT 431
GQ + F G + V +++ D + +LL+G D + W++ TK++ Q+ H V
Sbjct: 392 GQFVTVFR-GHVGPVYQVSWSADSR-LLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFA 449
Query: 432 ITFVDNNRRFVTSSDDKSLRVWE 454
+ + + + V+ D+ L++W+
Sbjct: 450 VDWSPDGEKVVSGGKDRVLKLWK 472
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 67/309 (21%), Positives = 136/309 (44%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R T +GH + V + F P G + S DT V++WD++ T GH V +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTETPLF-TCKGHKNWVLTV 157
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLN--P----DDDKQNILL 400
++ DG ++ S I W+ + G++ + TG ++ ++ P ++ +
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+ D +I WD+ K+ H AV + + + + T S D ++++WE +
Sbjct: 218 SKDGDARI--WDITLKKSIICLSGHTLAVTCVKWGGDGIIY-TGSQDCTIKMWETTQGKL 274
Query: 461 IKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
I+ + + H H + S++L +T + L + D+ T ++ N++K+ A + Y
Sbjct: 275 IREL-KGHGHWINSLAL--STEYVLRTGAFDH------TGRQYPPNEEKQKA---LERYN 322
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKV-FRTLKCHEGVCIGCEWHPLEQSKVATCG 578
SP+ R V SG + + W+ K + L H+ + + P + +A+
Sbjct: 323 KTKGDSPE-RLV-SGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSP-DGKWIASAS 379
Query: 579 WDGLIKYWD 587
+D ++ W+
Sbjct: 380 FDKSVRLWN 388
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 224 (83.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 76/310 (24%), Positives = 138/310 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSK 341
K++ +GH+K ++A+ + P + + + S+ D V++WD +G+C R GH++
Sbjct: 189 KQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDT-TAGRCERILTGHTQ 247
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
+V + + DG + +AS D+ IK W G + RT G +V + D L
Sbjct: 248 SVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWVNTMALSTDYA--LRT 303
Query: 402 GMSDKKIVQWDMNTKEIT---QEYDQHLGAVNTITFVDNN--RRFVTSSDDKSLRVWEFG 456
G + + +N +++ QE + A++ V R V+ SDD +L +W
Sbjct: 304 GAFEP--AEASVNAQDLRGSLQELKER--ALSRYNLVRGRGLERLVSGSDDFTLFLWSPA 359
Query: 457 IPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
H + + P++ +A+ S D I ++ R L + GH+ A
Sbjct: 360 EDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR---GHVAA 416
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 576
Y Q+ +S D R ++SG + WD K+ K+ L H +W P + +VA+
Sbjct: 417 VY--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP-DGQRVAS 473
Query: 577 CGWDGLIKYW 586
G D ++ W
Sbjct: 474 GGKDKCLRIW 483
Score = 152 (58.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 70/305 (22%), Positives = 121/305 (39%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF-- 348
T GH V +I + P G + S + ++ +WD + R GHSK + +S+
Sbjct: 151 TCQGHRHWVLSISWSPD-GKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEP 209
Query: 349 --CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
N +++ ++S D +++ WDT G+ R TG V L D +L + D
Sbjct: 210 LHANPECRYVASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTCLRWGGD--GLLYSASQD 266
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ I W + + + H VNT+ + + + V + ++ +
Sbjct: 267 RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELK 326
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK--RFAGHIVAGYACQVN 523
E + S ++ L + S D + ++S E +KK R GH QV
Sbjct: 327 ERAL-SRYNLVRGRGLERLVSGSDDFTLFLWSPAE----DKKPLARMTGH--QALINQVL 379
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGL 582
FSPD R + S + WD ++ K +L+ H W S++ G D
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA--DSRLLVSGSSDST 437
Query: 583 IKYWD 587
+K WD
Sbjct: 438 LKVWD 442
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 64/311 (20%), Positives = 127/311 (40%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GH++ V ++ F P G + S DT V+ WD+ T GH V I
Sbjct: 105 RCTSSLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTETPHF-TCQGHRHWVLSI 162
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN----ILLAG 402
S+ DG K + + I WD TG+ + G ++ L+ + N + +
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASS 222
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D + WD + H +V + + + + ++S D++++VW V+ +
Sbjct: 223 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCR 281
Query: 463 YISEPHMHSMPSISLHPNTNWL----AAQSLDNQILIYSTRERFQLNKKKRFAGH-IVAG 517
+ + H H + +++L +T++ A + + + R Q K++ + + +V G
Sbjct: 282 TL-QGHGHWVNTMAL--STDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRG 338
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 576
+ R V SG + + W + K + H+ + + P + +A+
Sbjct: 339 RGLE-------RLV-SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRIIAS 389
Query: 577 CGWDGLIKYWD 587
+D IK WD
Sbjct: 390 ASFDKSIKLWD 400
>MGI|MGI:1329037 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005102 "receptor binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016301
"kinase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1329037 EMBL:AF096285 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005102
GO:GO:0005681 GO:GO:0000122 GO:GO:0030512
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OMA:LWQTTVG OrthoDB:EOG4CRM0M
ChiTaRS:STRAP EMBL:AK075804 EMBL:AK077504 EMBL:AK145971
EMBL:AK152283 IPI:IPI00918973 RefSeq:NP_035629.2 UniGene:Mm.22584
ProteinModelPortal:Q9Z1Z2 SMR:Q9Z1Z2 STRING:Q9Z1Z2
PhosphoSite:Q9Z1Z2 REPRODUCTION-2DPAGE:IPI00130670
REPRODUCTION-2DPAGE:Q9Z1Z2 PaxDb:Q9Z1Z2 PRIDE:Q9Z1Z2
Ensembl:ENSMUST00000064910 GeneID:20901 KEGG:mmu:20901
NextBio:299765 Bgee:Q9Z1Z2 Genevestigator:Q9Z1Z2
GermOnline:ENSMUSG00000030224 Uniprot:Q9Z1Z2
Length = 350
Score = 219 (82.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 77/299 (25%), Positives = 132/299 (44%)
Query: 291 TWSGHTKGVSAIRF--FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
T SGHT+ V + F YG+ ++SA D K + ++G + T++GH AV +
Sbjct: 9 TCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQG-DTGDWIGTFLGHKGAVWGATL 67
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D TK TA+ D K WD +G + T + I V D N LL G DK +
Sbjct: 68 NKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDS---NYLLTGGQDKLL 124
Query: 409 VQWDMNTKEIT-QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+D+N E +E H + + ++++ + S+DDK++R+W+ +K ++
Sbjct: 125 RIYDLNKPEAEPKEISGHTSGIKKALWCSDDKQ-ILSADDKTVRLWDHATMTEVKSLNF- 182
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
+M S+ S+ P L + I +S L K F A + P+
Sbjct: 183 NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLEPIKSFEAPATINSA---SLHPE 234
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
F+++G + K + +D+ S + + K H G I C + A+ DG ++ W
Sbjct: 235 KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFSPDGELYASGSEDGTLRLW 292
Score = 165 (63.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 69/269 (25%), Positives = 106/269 (39%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T+ GH KG K +A D K+WD + + M + H V+ + F
Sbjct: 52 IGTFLGH-KGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMT--LAHKHIVKTVDF 108
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDKQNILLAGMSDKK 407
D LT DK ++ +D + +G + K L DDKQ IL A DK
Sbjct: 109 TQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSDDKQ-ILSA--DDKT 165
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+ WD T + + ++ +V+++ ++ V + +S+ IK P
Sbjct: 166 VRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSIAFHSAVSLEPIKSFEAP 223
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
++ S SLHP +L A D ++ Y +L K GH C V FSPD
Sbjct: 224 A--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF-GPIHC-VRFSPD 276
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKC 556
G SG +G W K + KC
Sbjct: 277 GELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>UNIPROTKB|E2RBU1 [details] [associations]
symbol:STRAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000122 GO:GO:0030512 GeneTree:ENSGT00630000089849 CTD:11171
KO:K13137 OMA:LWQTTVG EMBL:AAEX03015237 RefSeq:XP_543790.1
ProteinModelPortal:E2RBU1 Ensembl:ENSCAFT00000020131 GeneID:486663
KEGG:cfa:486663 Uniprot:E2RBU1
Length = 350
Score = 219 (82.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 77/299 (25%), Positives = 132/299 (44%)
Query: 291 TWSGHTKGVSAIRF--FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
T SGHT+ V + F YG+ ++SA D K + ++G + T++GH AV +
Sbjct: 9 TCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQG-DTGDWIGTFLGHKGAVWGATL 67
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D TK TA+ D K WD +G + T + I V D N LL G DK +
Sbjct: 68 NKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDS---NYLLTGGQDKLL 124
Query: 409 VQWDMNTKEIT-QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+D+N E +E H + + +++ + S+DDK++R+W+ +K ++
Sbjct: 125 RIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDKTVRLWDHATMTEVKSLNF- 182
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
+M S+ S+ P L + I +S L+ K F A + P+
Sbjct: 183 NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLDPIKSFEAPATINSA---SLHPE 234
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
F+++G + K + +D+ S + + K H G I C + A+ DG ++ W
Sbjct: 235 KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFSPDGELYASGSEDGTLRLW 292
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 68/270 (25%), Positives = 109/270 (40%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T+ GH KG K +A D K+WD + + M + H V+ + F
Sbjct: 52 IGTFLGH-KGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMT--LAHKHIVKTVDF 108
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDKQNILLAGMSDKK 407
D LT DK ++ +D + +G + K L +DKQ IL A DK
Sbjct: 109 TQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSA--DDKT 165
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV-VIKYISE 466
+ WD T + + ++ +V+++ ++ V + +S+ + + + IK
Sbjct: 166 VRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHSAVSLDPIKSFEA 222
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 526
P ++ S SLHP +L A D ++ Y +L K GH C V FSP
Sbjct: 223 PA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF-GPIHC-VRFSP 275
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 556
DG SG +G W K + KC
Sbjct: 276 DGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>UNIPROTKB|Q9Y3F4 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030054 "cell junction" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 Reactome:REACT_111102
Pathway_Interaction_DB:tgfbrpathway GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0007179 EMBL:CH471094 GO:GO:0030512 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:AJ010025 EMBL:AB024327 EMBL:AF161496 EMBL:AY049776
EMBL:AL136691 EMBL:BT020044 EMBL:BT020045 EMBL:AK312295
EMBL:BC000162 EMBL:BC062306 IPI:IPI00941907 RefSeq:NP_009109.3
UniGene:Hs.504895 ProteinModelPortal:Q9Y3F4 SMR:Q9Y3F4
IntAct:Q9Y3F4 MINT:MINT-1346033 STRING:Q9Y3F4 PhosphoSite:Q9Y3F4
DMDM:12643951 OGP:Q9Y3F4 PaxDb:Q9Y3F4 PeptideAtlas:Q9Y3F4
PRIDE:Q9Y3F4 DNASU:11171 Ensembl:ENST00000419869 GeneID:11171
KEGG:hsa:11171 UCSC:uc001rdc.4 GeneCards:GC12P016035
HGNC:HGNC:30796 HPA:HPA027320 MIM:605986 neXtProt:NX_Q9Y3F4
PharmGKB:PA134867032 InParanoid:Q9Y3F4 PhylomeDB:Q9Y3F4
ChiTaRS:STRAP GenomeRNAi:11171 NextBio:42509 ArrayExpress:Q9Y3F4
Bgee:Q9Y3F4 CleanEx:HS_STRAP Genevestigator:Q9Y3F4
GermOnline:ENSG00000023734 Uniprot:Q9Y3F4
Length = 350
Score = 219 (82.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 77/299 (25%), Positives = 132/299 (44%)
Query: 291 TWSGHTKGVSAIRF--FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
T SGHT+ V + F YG+ ++SA D K + ++G + T++GH AV +
Sbjct: 9 TCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQG-DTGDWIGTFLGHKGAVWGATL 67
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D TK TA+ D K WD +G + T + I V D N LL G DK +
Sbjct: 68 NKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDS---NYLLTGGQDKLL 124
Query: 409 VQWDMNTKEIT-QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+D+N E +E H + + +++ + S+DDK++R+W+ +K ++
Sbjct: 125 RIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDKTVRLWDHATMTEVKSLNF- 182
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
+M S+ S+ P L + I +S L+ K F A + P+
Sbjct: 183 NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLDPIKSFEAPATINSA---SLHPE 234
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
F+++G + K + +D+ S + + K H G I C + A+ DG ++ W
Sbjct: 235 KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFSPDGELYASGSEDGTLRLW 292
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 68/270 (25%), Positives = 109/270 (40%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T+ GH KG K +A D K+WD + + M + H V+ + F
Sbjct: 52 IGTFLGH-KGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMT--LAHKHIVKTVDF 108
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDKQNILLAGMSDKK 407
D LT DK ++ +D + +G + K L +DKQ IL A DK
Sbjct: 109 TQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSA--DDKT 165
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV-VIKYISE 466
+ WD T + + ++ +V+++ ++ V + +S+ + + + IK
Sbjct: 166 VRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSI-AFHSAVSLDPIKSFEA 222
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 526
P ++ S SLHP +L A D ++ Y +L K GH C V FSP
Sbjct: 223 PA--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF-GPIHC-VRFSP 275
Query: 527 DGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 556
DG SG +G W K + KC
Sbjct: 276 DGELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 215 (80.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 83/323 (25%), Positives = 145/323 (44%)
Query: 284 IPKRLV--HTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYM 337
+P++LV T GH+ V+++ P+ ++LS D + +W D N G R
Sbjct: 1 MPEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLT 60
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 397
GHS V D + D L+AS+DK I+ WD E G+ F G V+ ++ D +
Sbjct: 61 GHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQF-VGHTSDVLSVSISPDNRQ 119
Query: 398 ILLAGMSDKKIVQWDM--NTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVW 453
++ +G DK I W++ N K + H V+ + F N N FV++ DK+++VW
Sbjct: 120 VV-SGSRDKTIKIWNIIGNCKYTITD-GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVW 177
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ ++ H + ++++ P+ + A+ D ++++ E L + A +
Sbjct: 178 DLET-FSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKA-N 235
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL---------KCHEGVCIGC 564
I A + FSP+ ++ + G F D ++ + L K E CI
Sbjct: 236 INA-----LVFSPNRYWLCAATGSSIRIF-DLETQEKVDELTVDFVGVGKKSSEPECISL 289
Query: 565 EWHPLEQSKVATCGW-DGLIKYW 586
W P Q+ + GW D LI+ W
Sbjct: 290 TWSPDGQTLFS--GWTDNLIRVW 310
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 49/222 (22%), Positives = 93/222 (41%)
Query: 374 VIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQ-----HLGA 428
V+R G +V L+ + +ILL+G DK I+ W++ ++ Q H
Sbjct: 6 VLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHF 65
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHPNTNWLAAQ 487
V+ ++ +++S DK++R+W+ +++ H + S+S+ P+ + +
Sbjct: 66 VSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVG--HTSDVLSVSISPDNRQVVSG 123
Query: 488 SLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP--DGRFVMSGDGEGKCWFWDW 545
S D I I++ + GH + + V FSP D +S + WD
Sbjct: 124 SRDKTIKIWNIIGNCKYTITD--GGH--SDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDL 179
Query: 546 KSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
++ + + H G P + S A+ G DG + WD
Sbjct: 180 ETFSLRTSHYGHTGYVSAVTISP-DGSLCASGGRDGTLMLWD 220
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 228 (85.3 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 62/215 (28%), Positives = 102/215 (47%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH ++A+ + P G I++A D K+K+WD+ SG C+ T+ H+ V F G
Sbjct: 341 GHFDSMNALAYSPD-GKRIVTAADDGKLKVWDI-ESGFCIVTFTEHTSGVTACQFAKKGN 398
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ-WD 412
TAS D +I+ WD + RTF T D ++ AG D V W
Sbjct: 399 VLFTASLDGSIRAWDLIRYRNFRTF-TAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWS 457
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP-HMHS 471
+ T ++ + H G V+ + F + V+ S DK+ R+W SEP + +
Sbjct: 458 VQTGQLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDKTARIWSVFNRT---QTSEPLQLQA 514
Query: 472 -MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLN 505
+ S+++ P+++ LA +LD QI +S E Q++
Sbjct: 515 DVLSVAVRPDSSQLAVSTLDGQISFWSVTEAQQVS 549
Score = 132 (51.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 55/256 (21%), Positives = 104/256 (40%)
Query: 343 VRDISFCNDGTKFLTASYDKN-IKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
+ +S +G F++ + + + ++ GQ++ + Y++K D N L
Sbjct: 293 IHTLSISQNGIDFVSINKSGEWLAFGASKLGQLL-VWEWQSESYILKQQGHFDSMNALAY 351
Query: 402 GMSDKKIVQ---------WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
K+IV WD+ + + +H V F T+S D S+R
Sbjct: 352 SPDGKRIVTAADDGKLKVWDIESGFCIVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRA 411
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN-QILIYSTRERFQLNKKKRFA 511
W+ + + P S +++ P+ +AA SLD+ + I+S + L++ +
Sbjct: 412 WDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDSFDVHIWSVQTGQLLDQ---LS 468
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLE 570
GH G V F+PDG ++SG + W + + L+ V + P +
Sbjct: 469 GH--EGPVSAVAFAPDGGLLVSGSWDKTARIWSVFNRTQTSEPLQLQADV-LSVAVRP-D 524
Query: 571 QSKVATCGWDGLIKYW 586
S++A DG I +W
Sbjct: 525 SSQLAVSTLDGQISFW 540
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 222 (83.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 76/309 (24%), Positives = 137/309 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSK 341
K++ +GH+K ++ + + P + + + S+ D V++WD +G+C R GH++
Sbjct: 140 KQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDT-TAGRCERILTGHTQ 198
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
+V + + DG + +AS D+ IK W G + RT G +V + D L
Sbjct: 199 SVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWVNTMALSTDYA--LRT 254
Query: 402 GMSDKKIVQWDMNTKEIT---QEY-DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
G + + +N +++ QE D+ L N + R V+ SDD +L +W
Sbjct: 255 GAFEP--AEASINAQDLQGSLQELKDRALRRYNLVRG-QGPERLVSGSDDFTLFMWSPAE 311
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
H + + P++ +A+ S D I ++ R L + GH+ A
Sbjct: 312 DKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLR---GHVAAV 368
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
Y Q+ +S D R ++SG + WD K+ K+ L H +W P + +VA+
Sbjct: 369 Y--QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP-DGQRVASG 425
Query: 578 GWDGLIKYW 586
G D ++ W
Sbjct: 426 GKDKCLRIW 434
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 67/305 (21%), Positives = 120/305 (39%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF-- 348
T GH V +I + P G + S + ++ +WD + R GHSK + +S+
Sbjct: 102 TCQGHRHWVLSISWSPD-GKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEP 160
Query: 349 --CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
N +++ ++S D +++ WDT G+ R TG V L D +L + D
Sbjct: 161 LHANPECRYMASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTCLRWGGD--GLLYSASQD 217
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ I W + + + H VNT+ + + + + + ++ +
Sbjct: 218 RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELK 277
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK--RFAGHIVAGYACQVN 523
+ + ++ L + S D + ++S E +KK R GH QV
Sbjct: 278 DRALRRY-NLVRGQGPERLVSGSDDFTLFMWSPAE----DKKPLARMTGH--QALINQVL 330
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGL 582
FSPD R + S + WD ++ K +L+ H W S++ G D
Sbjct: 331 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA--DSRLLVSGSSDST 388
Query: 583 IKYWD 587
+K WD
Sbjct: 389 LKVWD 393
Score = 136 (52.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 67/312 (21%), Positives = 128/312 (41%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GH++ V ++ F P G + S DT V+ WD+ T GH V I
Sbjct: 56 RCTSSLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTETPHF-TCQGHRHWVLSI 113
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN----ILLAG 402
S+ DG + + I WD TG+ + G ++ L+ + N + +
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASS 173
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D + WD + H +V + + + + ++S D++++VW V+ +
Sbjct: 174 SKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLCR 232
Query: 463 YISEPHMHSMPSISLHPN----TNWL--AAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
+ + H H + +++L + T A S++ Q L S +E + +R+ ++V
Sbjct: 233 TL-QGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQE-LKDRALRRY--NLVR 288
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 575
G P+ R V SG + + W + K + H+ + + P + +A
Sbjct: 289 GQG------PE-RLV-SGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSP-DSRIIA 339
Query: 576 TCGWDGLIKYWD 587
+ +D IK WD
Sbjct: 340 SASFDKSIKLWD 351
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 217 (81.4 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 56/170 (32%), Positives = 87/170 (51%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H GH V+A+R G ++S D VK+WD + C+ T GH+ V + F
Sbjct: 494 LHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDP-ETETCLHTLQGHTNRVYSLQF 549
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG ++ S D +I+ WD ETG I T TG + + K NIL++G +D +
Sbjct: 550 --DGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGM---ELKDNILVSGNADSTV 603
Query: 409 VQWDMNTKEITQEY---DQHLGAVNTITFVDNNRRFV-TSSDDKSLRVWE 454
WD+ T + Q ++H AV + F N+ FV TSSDD ++++W+
Sbjct: 604 KIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFVITSSDDGTVKLWD 650
Score = 192 (72.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ I+S D +K+W +GKC+RT +GH+ V S D ++ S D+ +K W+
Sbjct: 391 GNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWS-SQMRDNI-IISGSTDRTLKVWN 447
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
ETG+ I T G V ++ + + +++G D + WD+ T + H+ A
Sbjct: 448 AETGECIHTLY-GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAA 503
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + + + RR V+ + D ++VW+ P + H+ SL + + + S
Sbjct: 504 VRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 558
Query: 489 LDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
LD I ++ N GH + +G + N ++SG+ + WD K
Sbjct: 559 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDNI------LVSGNADSTVKIWDIK 609
Query: 547 SCKVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + +TL+ H+ + C ++ V T DG +K WD
Sbjct: 610 TGQCLQTLQGPNKHQSA-VTCL--QFNKNFVITSSDDGTVKLWD 650
Score = 170 (64.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 62/258 (24%), Positives = 109/258 (42%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
++I+S D +K+W+ +G+C+ T GH+ VR + + ++ S D ++ WD
Sbjct: 432 NIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDI 488
Query: 370 ETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV 429
ETGQ + G + V + D + +++G D + WD T+ H V
Sbjct: 489 ETGQCLHVLM-GHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 544
Query: 430 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 489
++ F + V+ S D S+RVW+ I ++ H + L N L + +
Sbjct: 545 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMELKDNI--LVSGNA 599
Query: 490 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 549
D+ + I+ + L + H A Q N + FV++ +G WD K+ +
Sbjct: 600 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN----FVITSSDDGTVKLWDLKTGE 655
Query: 550 VFRTLKCHE-GVCIGCEW 566
R L E G G W
Sbjct: 656 FIRNLVTLESGGSGGVVW 673
Score = 134 (52.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT +GH S + ++++S D+ VKIWD+ +G+C++T G +K ++
Sbjct: 574 IHTLTGHQSLTSGMEL---KDNILVSGNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTC 629
Query: 349 CNDGTKF-LTASYDKNIKYWDTETGQVIRTFST 380
F +T+S D +K WD +TG+ IR T
Sbjct: 630 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 662
Score = 56 (24.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 5 QNYADEKEDELDKPENQNDQNPDSAALESSPPHILPSKSAAPQVD 49
Q+ DE+E+E+D+ + DQ+ DS+ E H +++ VD
Sbjct: 108 QDEEDEEEEEMDQESDDFDQSDDSSR-EDEHTHTNSVTNSSSIVD 151
Score = 40 (19.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 5 QNYADEKEDELDKPENQNDQNPD 27
+ +A E+++E D+ E + DQ D
Sbjct: 102 EEHAGEQDEE-DEEEEEMDQESD 123
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 81/314 (25%), Positives = 126/314 (40%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
+ P +L GH+ V+ + + D +KIWD+ S K T GH +
Sbjct: 273 HFPYKLYRVILGHSGWVNCVDVDIS-NEWFATGSNDRLIKIWDLA-SCKLKLTLTGHINS 330
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILL 400
+RDI + D +K WD E +VIR + G + Y + L+P D +L+
Sbjct: 331 IRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYH-GHLSGVYCLSLHPSLD---LLM 386
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D + WD+ TK H G V +I + V+ S DK +R+W+
Sbjct: 387 SGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKC 446
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
++ H S+ S+S+HP + DN + F N F I
Sbjct: 447 RISLTH-HKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITG-FNSIINCSLIK 504
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL--KCHEGVCIGCEWHPLE------QS 572
Q + D ++ G G+ F+DW S + TL K G + CE L +S
Sbjct: 505 QDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGT-VECENSTLSMAFDKSES 563
Query: 573 KVATCGWDGLIKYW 586
++ T D IK W
Sbjct: 564 RLITTHGDKSIKIW 577
Score = 141 (54.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V SGHT V +I ++S D +++WD+ N+GKC + H K++R
Sbjct: 402 KSSVFVLSGHTGTVMSI-CSQSVEPQVVSGSQDKMIRLWDL-NNGKCRISLTHHKKSIRS 459
Query: 346 ISFCNDGTKFLTASYDKNIKYW---DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 402
+S F + D N+K W D E + I F++ ++K +P + +IL+ G
Sbjct: 460 LSIHPFEYSFCSCGTD-NVKVWCGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILILG 518
Query: 403 MSDKKI--VQWDMNTKEITQEYDQHLGAVN------TITFVDNNRRFVTSSDDKSLRVWE 454
++ ++ W K T G V ++ F + R +T+ DKS+++W+
Sbjct: 519 SNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIWK 578
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 225 (84.3 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 81/314 (25%), Positives = 126/314 (40%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
+ P +L GH+ V+ + + D +KIWD+ S K T GH +
Sbjct: 273 HFPYKLYRVILGHSGWVNCVDVDIS-NEWFATGSNDRLIKIWDLA-SCKLKLTLTGHINS 330
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILL 400
+RDI + D +K WD E +VIR + G + Y + L+P D +L+
Sbjct: 331 IRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYH-GHLSGVYCLSLHPSLD---LLM 386
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D + WD+ TK H G V +I + V+ S DK +R+W+
Sbjct: 387 SGGRDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKC 446
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
++ H S+ S+S+HP + DN + F N F I
Sbjct: 447 RISLTH-HKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADAEFDRNITG-FNSIINCSLIK 504
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL--KCHEGVCIGCEWHPLE------QS 572
Q + D ++ G G+ F+DW S + TL K G + CE L +S
Sbjct: 505 QDPYFNDSSILILGSNNGQLHFYDWSSGYKYDTLSNKVVPGT-VECENSTLSMAFDKSES 563
Query: 573 KVATCGWDGLIKYW 586
++ T D IK W
Sbjct: 564 RLITTHGDKSIKIW 577
Score = 141 (54.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V SGHT V +I ++S D +++WD+ N+GKC + H K++R
Sbjct: 402 KSSVFVLSGHTGTVMSI-CSQSVEPQVVSGSQDKMIRLWDL-NNGKCRISLTHHKKSIRS 459
Query: 346 ISFCNDGTKFLTASYDKNIKYW---DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAG 402
+S F + D N+K W D E + I F++ ++K +P + +IL+ G
Sbjct: 460 LSIHPFEYSFCSCGTD-NVKVWCGADAEFDRNITGFNSIINCSLIKQDPYFNDSSILILG 518
Query: 403 MSDKKI--VQWDMNTKEITQEYDQHLGAVN------TITFVDNNRRFVTSSDDKSLRVWE 454
++ ++ W K T G V ++ F + R +T+ DKS+++W+
Sbjct: 519 SNNGQLHFYDWSSGYKYDTLSNKVVPGTVECENSTLSMAFDKSESRLITTHGDKSIKIWK 578
>RGD|1311114 [details] [associations]
symbol:Strap "serine/threonine kinase receptor associated
protein" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005102 "receptor binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030054 "cell
junction" evidence=ISO] [GO:0030512 "negative regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1311114 GO:GO:0005739 GO:GO:0005886 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030054 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0030512 HSSP:P63005 GeneTree:ENSGT00630000089849 CTD:11171
HOGENOM:HOG000174258 HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M
EMBL:BC083714 IPI:IPI00364585 RefSeq:NP_001011969.1
UniGene:Rn.228807 ProteinModelPortal:Q5XIG8 IntAct:Q5XIG8
STRING:Q5XIG8 PRIDE:Q5XIG8 Ensembl:ENSRNOT00000009923 GeneID:297699
KEGG:rno:297699 UCSC:RGD:1311114 InParanoid:Q5XIG8 NextBio:642559
Genevestigator:Q5XIG8 Uniprot:Q5XIG8
Length = 350
Score = 218 (81.8 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 77/299 (25%), Positives = 131/299 (43%)
Query: 291 TWSGHTKGVSAIRF--FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
T SGHT+ V + F YG+ ++SA D K + ++G + T++GH AV +
Sbjct: 9 TCSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQG-DTGDWIGTFLGHKGAVWGATL 67
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D TK TA+ D K WD +G + T + I V D N LL G DK +
Sbjct: 68 NKDATKAATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDS---NYLLTGGQDKLL 124
Query: 409 VQWDMNTKEIT-QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+D+N E +E H + + +++ + S+DDK++R+W+ +K ++
Sbjct: 125 RIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSADDKTVRLWDHATMTEVKSLNF- 182
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
+M S+ S+ P L + I +S L K F A + P+
Sbjct: 183 NM-SVSSMEYIPEGEILVI-TYGRSIAFHSA---VSLEPIKSFEAPATINSA---SLHPE 234
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
F+++G + K + +D+ S + + K H G I C + A+ DG ++ W
Sbjct: 235 KEFLVAGGEDFKLYKYDYNSGEELESYKGHFGP-IHCVRFSPDGELYASGSEDGTLRLW 292
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 68/269 (25%), Positives = 106/269 (39%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T+ GH KG K +A D K+WD + + M + H V+ + F
Sbjct: 52 IGTFLGH-KGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMT--LAHKHIVKTVDF 108
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK-LNPDDDKQNILLAGMSDKK 407
D LT DK ++ +D + +G + K L +DKQ IL A DK
Sbjct: 109 TQDSNYLLTGGQDKLLRIYDLNKPEAEPKEISGHTSGIKKALWCSEDKQ-ILSA--DDKT 165
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
+ WD T + + ++ +V+++ ++ V + +S+ IK P
Sbjct: 166 VRLWDHATMTEVKSLNFNM-SVSSMEYIPEGEILVITYG-RSIAFHSAVSLEPIKSFEAP 223
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
++ S SLHP +L A D ++ Y +L K GH C V FSPD
Sbjct: 224 A--TINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYK---GHF-GPIHC-VRFSPD 276
Query: 528 GRFVMSGDGEGKCWFWDWKSCKVFRTLKC 556
G SG +G W K + KC
Sbjct: 277 GELYASGSEDGTLRLWQTVVGKTYGLWKC 305
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 210 (79.0 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 83/314 (26%), Positives = 139/314 (44%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA----- 342
LVHT H V ++F G L+ G + ++DV +GK + T S
Sbjct: 306 LVHTLE-HPSVVCCVKF-SNNGKY-LATGCNQAANVFDV-QTGKKLFTLHEESPDPSRDL 361
Query: 343 -VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
VR I+F DG +T + D+ IK WD T +V FS G + L+ + + +++
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFS-GHEQDIYSLDFSHNGR-FIVS 419
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
G D+ WD+ T + + + G V I N++ S D+ +RVW +V
Sbjct: 420 GSGDRTARLWDVETGQCILKLEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVE 478
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY---STRE-RFQLNK-----KKRFAG 512
+ E H S+ SI+ P+++ L + SLD I ++ +TR K K + G
Sbjct: 479 RL--EGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 572
H + V SPD R+ +SG + FWD ++ + + T + H+ I + P +
Sbjct: 537 H--TDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSP-DGR 593
Query: 573 KVATCGWDGLIKYW 586
+ A+ D + W
Sbjct: 594 QFASGSGDLRARIW 607
Score = 188 (71.2 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 64/264 (24%), Positives = 120/264 (45%)
Query: 315 AGMDTKVKIWDVFNSGKCMRTY-------MGHSKAVRDISFCNDGTKFLTASYDKNIKYW 367
A T + W V + C R + + H V + F N+G K+L ++ +
Sbjct: 281 AARKTTSQSWYVTYNPACKRVFNINLVHTLEHPSVVCCVKFSNNG-KYLATGCNQAANVF 339
Query: 368 DTETGQVIRTF-STGKIP----YV--VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
D +TG+ + T P YV + +PD L+ G D++I WD++T+++
Sbjct: 340 DVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDG---KYLVTGTEDRQIKLWDLSTQKVRY 396
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMPSISLHP 479
+ H + ++ F N R V+ S D++ R+W+ ++K E + + +I++ P
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIE---NGVTAIAISP 453
Query: 480 NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 539
N ++A SLD I ++S +R GH + Y+ + FSPD ++SG +
Sbjct: 454 NDQFIAVGSLDQIIRVWSVSGTLV----ERLEGHKESVYS--IAFSPDSSILLSGSLDKT 507
Query: 540 CWFWDWKSCKV--FRTLKCHEGVC 561
W+ ++ + +K EG+C
Sbjct: 508 IKVWELQATRSVGLSAIK-PEGIC 530
Score = 185 (70.2 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 73/255 (28%), Positives = 117/255 (45%)
Query: 262 DYQGRSWVAPPKDAKAA----NDHCYI---P--KR-----LVHTWSGHTKGVSAIRFFPK 307
+YQGR +AP D +AA + Y+ P KR LVHT H V ++F
Sbjct: 266 EYQGREQIAPVSDTEAARKTTSQSWYVTYNPACKRVFNINLVHTLE-HPSVVCCVKF-SN 323
Query: 308 YGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA------VRDISFCNDGTKFLTASYD 361
G L+ G + ++DV +GK + T S VR I+F DG +T + D
Sbjct: 324 NGKY-LATGCNQAANVFDV-QTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTED 381
Query: 362 KNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQE 421
+ IK WD T +V FS G + L+ + + +++G D+ WD+ T + +
Sbjct: 382 RQIKLWDLSTQKVRYVFS-GHEQDIYSLDFSHNGR-FIVSGSGDRTARLWDVETGQCILK 439
Query: 422 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNT 481
+ G V I N++ S D+ +RVW +V + E H S+ SI+ P++
Sbjct: 440 LEIENG-VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERL--EGHKESVYSIAFSPDS 496
Query: 482 NWLAAQSLDNQILIY 496
+ L + SLD I ++
Sbjct: 497 SILLSGSLDKTIKVW 511
Score = 131 (51.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/139 (27%), Positives = 64/139 (46%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWD-----------VFNSGKCMRTY 336
LV GH + V +I F P ++LS +D +K+W+ + G C TY
Sbjct: 476 LVERLEGHKESVYSIAFSPD-SSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATY 534
Query: 337 MGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDK 395
GH+ V ++ D L+ S D+++++WD +TGQ T K + V +PD +
Sbjct: 535 TGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG-R 593
Query: 396 QNILLAGMSDKKIVQWDMN 414
Q +G D + W ++
Sbjct: 594 Q--FASGSGDLRARIWSID 610
Score = 61 (26.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 27/85 (31%), Positives = 36/85 (42%)
Query: 18 PENQNDQNPDSA---ALESSPPHILPSK---SAAPQVDDTTLALTVAQAR---QTQSRP- 67
P N NP + A+ PP I P+K SA P + + A +++QA + Q R
Sbjct: 214 PGVSNYYNPSATSKPAVNVQPPRI-PTKATPSAEPSMTASANAGSISQAGPDGEYQGREQ 272
Query: 68 IDPSQHVVAYNPTYEQLWAPIYGPA 92
I P A T Q W Y PA
Sbjct: 273 IAPVSDTEAARKTTSQSWYVTYNPA 297
Score = 46 (21.3 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 62 QTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHP 94
QT+S PS H+ P ++Q+ PI+ A+P
Sbjct: 120 QTKSTSQPPSNHL----PAFQQI-PPIHQSAYP 147
Score = 38 (18.4 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 112 VEDASIDSFVFDE---QYNTFYKYGYAADPAGSNY 143
VEDA+ + D +YN + +A+ G++Y
Sbjct: 4 VEDATKVQEMLDALKAEYNALAHHSFASKARGNDY 38
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 214 (80.4 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 75/308 (24%), Positives = 131/308 (42%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P++ + T V A+RF G+ L+ G D +K+W+ G +RTY GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVD-GNYCLTCGSDKTLKLWNPLR-GTLLRTYSGHGYEV 70
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
D + D + + DK + WD +GQV+R F GK+ V+ N ++ ++L+
Sbjct: 71 LDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TVQFN---EEATVILS 126
Query: 402 GMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
G D I WD ++ E Q D+ ++++ D+ + S D +R ++ +
Sbjct: 127 GSIDSTIRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--VLAGSVDGRVRRYDLRMGQ 184
Query: 460 VIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
+ Y+ P + I + SLD+ + + ++ +L + + GH Y
Sbjct: 185 LFSDYVGSP----ITCICFSRDGQCTLVSSLDSTLRLLD-KDTGELLGE--YTGHKNKEY 237
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
S V+S +GK +FWD + L GV +HP E + G
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEPCLLTAMG 297
Query: 579 WDGLIKYW 586
G I+ W
Sbjct: 298 --GSIQCW 303
Score = 182 (69.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 59/249 (23%), Positives = 114/249 (45%)
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI--PV 459
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D ++R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPE 144
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
++ + E + S+ + + + A S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--VLAGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 578
C + FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 C-ICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSCS 254
Query: 579 WDGLIKYWD 587
DG + +WD
Sbjct: 255 EDGKVFFWD 263
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 217 (81.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 56/170 (32%), Positives = 87/170 (51%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H GH V+A+R G ++S D VK+WD + C+ T GH+ V + F
Sbjct: 499 LHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDP-ETETCLHTLQGHTNRVYSLQF 554
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG ++ S D +I+ WD ETG I T TG + + K NIL++G +D +
Sbjct: 555 --DGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGM---ELKDNILVSGNADSTV 608
Query: 409 VQWDMNTKEITQEY---DQHLGAVNTITFVDNNRRFV-TSSDDKSLRVWE 454
WD+ T + Q ++H AV + F N+ FV TSSDD ++++W+
Sbjct: 609 KIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFVITSSDDGTVKLWD 655
Score = 192 (72.6 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ I+S D +K+W +GKC+RT +GH+ V S D ++ S D+ +K W+
Sbjct: 396 GNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWS-SQMRDNI-IISGSTDRTLKVWN 452
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
ETG+ I T G V ++ + + +++G D + WD+ T + H+ A
Sbjct: 453 AETGECIHTLY-GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAA 508
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + + + RR V+ + D ++VW+ P + H+ SL + + + S
Sbjct: 509 VRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 563
Query: 489 LDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
LD I ++ N GH + +G + N ++SG+ + WD K
Sbjct: 564 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDNI------LVSGNADSTVKIWDIK 614
Query: 547 SCKVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + +TL+ H+ + C ++ V T DG +K WD
Sbjct: 615 TGQCLQTLQGPNKHQSA-VTCL--QFNKNFVITSSDDGTVKLWD 655
Score = 170 (64.9 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 62/258 (24%), Positives = 109/258 (42%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
++I+S D +K+W+ +G+C+ T GH+ VR + + ++ S D ++ WD
Sbjct: 437 NIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDI 493
Query: 370 ETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV 429
ETGQ + G + V + D + +++G D + WD T+ H V
Sbjct: 494 ETGQCLHVLM-GHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 549
Query: 430 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 489
++ F + V+ S D S+RVW+ I ++ H + L N L + +
Sbjct: 550 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMELKDNI--LVSGNA 604
Query: 490 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 549
D+ + I+ + L + H A Q N + FV++ +G WD K+ +
Sbjct: 605 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN----FVITSSDDGTVKLWDLKTGE 660
Query: 550 VFRTLKCHE-GVCIGCEW 566
R L E G G W
Sbjct: 661 FIRNLVTLESGGSGGVVW 678
Score = 134 (52.2 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT +GH S + ++++S D+ VKIWD+ +G+C++T G +K ++
Sbjct: 579 IHTLTGHQSLTSGMEL---KDNILVSGNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTC 634
Query: 349 CNDGTKF-LTASYDKNIKYWDTETGQVIRTFST 380
F +T+S D +K WD +TG+ IR T
Sbjct: 635 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 667
Score = 55 (24.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 5 QNYADEKEDELDKPENQNDQNPDSA 29
Q+ DE+E+E+D+ + DQ+ DS+
Sbjct: 113 QDEEDEEEEEMDQESDDFDQSDDSS 137
Score = 40 (19.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 5 QNYADEKEDELDKPENQNDQNPD 27
+ +A E+++E D+ E + DQ D
Sbjct: 107 EEHAGEQDEE-DEEEEEMDQESD 128
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 218 (81.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 292 WSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
++GH+ G++ +RF P G I ++ D+ V +W++ + +C+R + HS V +++
Sbjct: 14 FTGHSGGITQLRFGPD-GAQIATSSTDSTVILWNLNQAARCIR-FASHSAPVNGVAWSPK 71
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
G +A +D+ +K W+ + V F V+ D +++L DK W
Sbjct: 72 GNLVASAGHDRTVKIWEPKLRGVSGEFVAHS--KAVRSVDFDSTGHLMLTASDDKSAKIW 129
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+ ++ + Q V + F N + T+SDDKS+R+++ ++ +E +
Sbjct: 130 RVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERA-A 188
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
++ HP N LA N+I I+ QL + + H + V F P G F+
Sbjct: 189 PRQLAWHPWGNMLAVALGCNRIKIFDVSGS-QL--LQLYVVH--SAPVNDVAFHPSGHFL 243
Query: 532 MSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
+SG + D + TL H + + K AT G D + W
Sbjct: 244 LSGSDDRTIRILDLLEGRPIYTLTGHTDA-VNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/182 (26%), Positives = 82/182 (45%)
Query: 274 DAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCM 333
D K+A ++ V +++ V + +F P G L+ +A D V+I+DV +SG+C+
Sbjct: 122 DDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPN-GKLVATASDDKSVRIYDV-DSGECV 179
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPD 392
RT+ A R +++ G A IK +D Q+++ + P V +P
Sbjct: 180 RTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPS 239
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
+ LL+G D+ I D+ H AVN + F + +F T D+ L V
Sbjct: 240 G---HFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLV 296
Query: 453 WE 454
W+
Sbjct: 297 WQ 298
Score = 159 (61.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 42/173 (24%), Positives = 79/173 (45%)
Query: 326 VFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD-TETGQVIRTFSTGKIP 384
+F R + GHS + + F DG + T+S D + W+ + + IR F++ P
Sbjct: 4 LFRDPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHSAP 62
Query: 385 YV-VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVT 443
V +P K N++ + D+ + W+ + ++ E+ H AV ++ F +T
Sbjct: 63 VNGVAWSP---KGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLT 119
Query: 444 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
+SDDKS ++W + ++ + + + S PN +A S D + IY
Sbjct: 120 ASDDKSAKIWRVARRQFVSSFAQQN-NWVRSAKFSPNGKLVATASDDKSVRIY 171
Score = 125 (49.1 bits), Expect = 0.00011, P = 0.00011
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+L+ + H+ V+ + F P GH +LS D ++I D+ G+ + T GH+ AV +
Sbjct: 219 QLLQLYVVHSAPVNDVAFHPS-GHFLLSGSDDRTIRILDLLE-GRPIYTLTGHTDAVNAV 276
Query: 347 SFCNDGTKFLTASYDKNIKYWDT 369
+F DG KF T D+ + W +
Sbjct: 277 AFSRDGDKFATGGSDRQLLVWQS 299
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 216 (81.1 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 80/299 (26%), Positives = 123/299 (41%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P +L SGH V I P ++ D +KIWD+ SGK + GH VR
Sbjct: 192 PWKLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLA-SGKLKLSLTGHISTVR 249
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAG 402
+ + DK +K WD E +VIR + G + Y + L+P D +L+
Sbjct: 250 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGLDLHPTID---VLVTC 305
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D WD+ TK H AV T+ + +T S D ++R+W+ + +
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL-VAGKTR 364
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
H S+ ++ LHP A+ S DN I + + + + +GH V
Sbjct: 365 VTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFI---QNLSGHNAIINTLTV 420
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE-QSKVATCGWD 580
N DG V SG G WDW++ F+ + H V G L+ +S + C +D
Sbjct: 421 N--SDGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS----LDSESGIFACAFD 470
Score = 145 (56.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 48/177 (27%), Positives = 81/177 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K VHT SGHT V+ +R +I + DT +++WD+ +GK T H K+VR
Sbjct: 319 KASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLV-AGKTRVTLTNHKKSVRA 376
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ F + S D NIK W G I+ S G + L + D +L++G +
Sbjct: 377 VVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLS-GHNAIINTLTVNSD--GVLVSGADN 432
Query: 406 KKIVQWDMNTKEITQEYDQHL--GAVNT------ITFVDNNRRFVTSSDDKSLRVWE 454
+ WD T Q + G++++ F + R +T+ DK+++V++
Sbjct: 433 GTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYK 489
Score = 49 (22.3 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 39 LPSKSAAPQVDDTTLALTVAQARQTQSRPI 68
+PS+SAA + +AL +QAR +RP+
Sbjct: 117 MPSESAAQSL---AVALPASQARADANRPV 143
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 212 (79.7 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 74/308 (24%), Positives = 130/308 (42%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P++ V T V A+RF G+ L+ G D +K+W+ G +RTY GH V
Sbjct: 13 LPQKRVKTLDCGQGAVRAVRFNVD-GNYCLTCGSDKTLKLWNPLR-GTLLRTYSGHGYEV 70
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
D + D + + DK + WD +GQV+R F GK+ V+ N ++ ++L+
Sbjct: 71 LDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TVQFN---EEATVILS 126
Query: 402 GMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
G D I WD ++ E Q D+ ++++ D+ ++ S D +R ++ +
Sbjct: 127 GSIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVSDHE--VLSGSVDGRVRRYDLRMGQ 184
Query: 460 VIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
+ Y+ P + + SLD+ + + ++ +L + + GH Y
Sbjct: 185 LFSDYVGSP----ITCTCFSRDGQCTLVSSLDSTLRLLD-KDTGELLGE--YTGHKNQEY 237
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
S V+S +GK +FWD + L GV +HP E + G
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEPCLLTAMG 297
Query: 579 WDGLIKYW 586
G + W
Sbjct: 298 --GSVHCW 303
Score = 181 (68.8 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 59/249 (23%), Positives = 113/249 (45%)
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI--PV 459
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPE 144
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
++ + E + S+ + + + + S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--VLSGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 578
C FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCS 254
Query: 579 WDGLIKYWD 587
DG + +WD
Sbjct: 255 EDGKVYFWD 263
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 220 (82.5 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 66/251 (26%), Positives = 114/251 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
+++V T GHTK VS++ + P ++ SA D+ +++W V G C++ H AV
Sbjct: 255 EQIVATLKGHTKKVSSVIYHPAQA-VVFSASSDSTIRVWSV-TGGNCVQVVRAHESAVTG 312
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIR--TFST-GKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ T T G + +PD I G
Sbjct: 313 LSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDG---LIFGTG 369
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G V I F +N T + D SL++W+ K
Sbjct: 370 TGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFK 429
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
I+ + + + S+ + +LA D I +Y + Q ++ F+ H +G V
Sbjct: 430 TITLDNNYEVKSLVFDQSGTYLAVGGSD--IRVYICK---QWSEVLNFSDH--SGLVTGV 482
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 483 AFGEHAQFLAS 493
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 58/226 (25%), Positives = 95/226 (42%)
Query: 339 HSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPD 392
HS +V I C D K LT DKN+ +D Q++ T T K+ V+ +P
Sbjct: 218 HSASVPGILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVI-YHP- 275
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
Q ++ + SD I W + Q H AV ++ ++SS+D+
Sbjct: 276 --AQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQ---Y 330
Query: 453 WEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 508
W F I V+ K E ++ HP+ + D+QI I+ +ER +
Sbjct: 331 WAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNV---A 387
Query: 509 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 554
F GH +G + FS +G ++ +G + WD + K F+T+
Sbjct: 388 NFPGH--SGPVTAIAFSENGYYLATGAQDSSLKLWDLRKLKNFKTI 431
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/209 (22%), Positives = 85/209 (40%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ +P ++ L+ N +L G +DK +V +D ++I H V+++ +
Sbjct: 219 SASVPGILSLDLCPTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQA 278
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++RVW ++ + H ++ +SLH ++L + S D Q +S
Sbjct: 279 VVFSASSDSTIRVWSVTGGNCVQVV-RAHESAVTGLSLHATGDYLLSSSED-QYWAFSDI 336
Query: 500 ERFQLNKKKRFAGHIVAGYACQ-VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 558
+ ++ K AG A F PDG +G G+ + WD K H
Sbjct: 337 QTGRVLTK---VTDETAGCALTCAQFHPDGLIFGTGTGDSQIKIWDLKERTNVANFPGHS 393
Query: 559 GVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 394 GPVTAIAFSE-NGYYLATGAQDSSLKLWD 421
Score = 128 (50.1 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 299 VSAIRFFPKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLT 357
++ +F P G LI G D+++KIWD+ + + GHS V I+F +G T
Sbjct: 354 LTCAQFHPD-G-LIFGTGTGDSQIKIWDLKERTN-VANFPGHSGPVTAIAFSENGYYLAT 410
Query: 358 ASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV---QWDMN 414
+ D ++K WD + +T + Y VK D L G SD ++ QW
Sbjct: 411 GAQDSSLKLWDLRKLKNFKTITLDN-NYEVKSLVFDQSGTYLAVGGSDIRVYICKQWS-- 467
Query: 415 TKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
E+ + H G V + F ++ + ++ D+SL+ +
Sbjct: 468 --EVLN-FSDHSGLVTGVAFGEHAQFLASTGMDRSLKFY 503
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 225 (84.3 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 77/285 (27%), Positives = 124/285 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H+ V+ + K L+L+ G D KV +W + + M + GH+ V ++F ++
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPM-SLCGHTSPVDSVAFNSEEVL 72
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSDKKIVQWDM 413
L + IK WD E +++R F+ + V+ +P + L +G SD + WD
Sbjct: 73 VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE---FLASGSSDTNLRVWDT 129
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Q Y H ++TI F + R V+ D ++VW+ K + E H P
Sbjct: 130 RKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL---TAGKLLHEFKCHEGP 186
Query: 474 --SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
S+ HP LA S D + + E F+L R V A F PDG+ +
Sbjct: 187 IRSLDFHPLEFLLATGSADRTVKFWDL-ETFELIGTTRPEATGVRAIA----FHPDGQTL 241
Query: 532 MSGDGEG-KCWFWDWKSCKV-----FRTLK--C-HEGVCIGCEWH 567
G +G K + W+ C+ + TL C +EG IGC ++
Sbjct: 242 FCGLDDGLKVYSWEPVICRDGVDMGWSTLGDFCINEGKFIGCSYY 286
Score = 213 (80.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 50/177 (28%), Positives = 85/177 (48%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
++V ++GH SA+ F P +G + S DT +++WD G C++TY GH++ + I
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVWDTRKKG-CIQTYKGHTRGISTI 148
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA-GMSD 405
F DG ++ D +K WD G+++ F + P + L D LLA G +D
Sbjct: 149 EFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP-IRSL--DFHPLEFLLATGSAD 205
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
+ + WD+ T E+ V I F + + DD L+V+ + PV+ +
Sbjct: 206 RTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD-GLKVYSWE-PVICR 260
Score = 207 (77.9 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+LL G D K+ W + H V+++ F + + +++W+
Sbjct: 30 LLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H + ++ HP +LA+ S D + ++ TR++ + K GH G
Sbjct: 90 SKMVRAFTG-HRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK---GH-TRG 144
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
+ + FSPDGR+V+SG + WD + K+ KCHEG ++HPLE +AT
Sbjct: 145 IST-IEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE-FLLATG 202
Query: 578 GWDGLIKYWD 587
D +K+WD
Sbjct: 203 SADRTVKFWD 212
Score = 182 (69.1 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 44/133 (33%), Positives = 70/133 (52%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K + T+ GHT+G+S I F P G ++S G+D VK+WD+ +GK + + H +R
Sbjct: 132 KGCIQTYKGHTRGISTIEFSPD-GRWVVSGGLDNVVKVWDL-TAGKLLHEFKCHEGPIRS 189
Query: 346 ISFCNDGTKFL--TASYDKNIKYWDTETGQVIRTF---STGKIPYVVKLNPDDDKQNILL 400
+ F +FL T S D+ +K+WD ET ++I T +TG + +PD L
Sbjct: 190 LDF--HPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGV--RAIAFHPDGQT---LF 242
Query: 401 AGMSDK-KIVQWD 412
G+ D K+ W+
Sbjct: 243 CGLDDGLKVYSWE 255
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 227 (85.0 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 53/210 (25%), Positives = 109/210 (51%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H +S +++ G I++ D K+K+WD+ NSG C+ T+ H+ AV + F G
Sbjct: 338 HYDALSTLQYSSD-GQRIITGADDGKIKVWDM-NSGFCIVTFTQHTSAVSGLCFSKRGNV 395
Query: 355 FLTASYDKNIKYWDTETGQVIRTFST-GKIPY-VVKLNPDDDKQNILLAGMSDK-KIVQW 411
++S D +++ WD + RTF+ ++ + + ++P + I+ AG D +I W
Sbjct: 396 LFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGE---IVCAGSQDSFEIFMW 452
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE-FGIPVVIKYISEPHMH 470
+ T ++ + H G V++++F + + S DK++R+W+ F +++ + P
Sbjct: 453 SVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPS-- 510
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
+ S++ HP+ + SLD Q+ ++ +E
Sbjct: 511 DVLSLAFHPDGKEVCVASLDGQLTFWNVQE 540
Score = 151 (58.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 35/182 (19%), Positives = 81/182 (44%)
Query: 407 KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE 466
+++ W+ ++ + H A++T+ + + +R +T +DD ++VW+ I ++
Sbjct: 320 QLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQ 379
Query: 467 PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP 526
H ++ + N L + SLD + + + + + F ++C + P
Sbjct: 380 -HTSAVSGLCFSKRGNVLFSSSLDGSVRAW---DLIRYRNFRTFTAPSRVQFSC-IAVDP 434
Query: 527 DGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 585
G V +G + + + W ++ ++ TL HEG ++ S +A+ WD ++
Sbjct: 435 SGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNS-SGSLLASGSWDKTVRI 493
Query: 586 WD 587
WD
Sbjct: 494 WD 495
Score = 53 (23.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 23/88 (26%), Positives = 34/88 (38%)
Query: 282 CYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGK--------CM 333
C +R V + V AI F P +S G +++W NS +
Sbjct: 82 CNFLRRSVLHYFNFKSPVGAIEFSPNGKFFAVSLGK--LIQVWRTPNSLEEREFAPFVLH 139
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYD 361
R Y GH + IS+ D F++ S D
Sbjct: 140 REYTGHFDDIVSISWSADSRFFISTSKD 167
Score = 44 (20.5 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 182 GMAVDVDPAEVNNPATDSWLMKNR 205
G +D + AE N T WL+K R
Sbjct: 226 GEVID-EEAEENKTRTHIWLIKER 248
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 221 (82.9 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 63/263 (23%), Positives = 114/263 (43%)
Query: 299 VSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRT-YMGHSKAVRDISFCNDGTKFLT 357
+ ++ F P G + + D ++++WD+ + + +R + GH + + + F DG +
Sbjct: 349 IRSVCFSPD-GKYLATGAEDKQIRVWDI--TTRTIRIQFAGHEQDIYSLDFARDGRTIAS 405
Query: 358 ASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK- 416
S D+ ++ WD E G + F+ V ++PD + AG DK + WD+
Sbjct: 406 GSGDRTVRLWDIENGTALTVFTIEDGVTTVAISPDT---KYVAAGSLDKSVRVWDLTQGC 462
Query: 417 --EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV------------VIK 462
E + D H +V ++ F N R VT S DK++++WE P +K
Sbjct: 463 PVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVK 522
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
E H + S++L P+ W+ + S D + + R + + GH V
Sbjct: 523 TF-EGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTG---STQLMLQGH--KNSVISV 576
Query: 523 NFSPDGRFVMSGDGEGKCWFWDW 545
SP G F +G G+ + W +
Sbjct: 577 APSPTGGFFATGSGDMRARIWSY 599
Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 80/292 (27%), Positives = 123/292 (42%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGK--CMRTYMGHSKA--- 342
LVHT H V +RF G + + G + +I+DV N+G+ C+
Sbjct: 292 LVHTLQ-HESVVCCVRFSAD-GKYV-ATGCNRSAQIFDV-NTGEKVCVLQDDNADTTGDL 347
Query: 343 -VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
+R + F DG T + DK I+ WD T + IR G + L+ D + I +
Sbjct: 348 YIRSVCFSPDGKYLATGAEDKQIRVWDITT-RTIRIQFAGHEQDIYSLDFARDGRTIA-S 405
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF--GIPV 459
G D+ + WD+ + G V T+ + + S DKS+RVW+ G PV
Sbjct: 406 GSGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPV 464
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY---STRERFQ-LNKK-----KRF 510
+ H S+ S++ PN L SLD I ++ + R Q K K F
Sbjct: 465 ERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTF 524
Query: 511 AGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCI 562
GH + V +PD ++VMSG + FWD ++ L+ H+ I
Sbjct: 525 EGH--RDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVI 574
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 217 (81.4 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 81/337 (24%), Positives = 148/337 (43%)
Query: 270 APPKDAKAANDHCYIPKRLVH-TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFN 328
AP K+ + + +IP+ + +GH ++ + F P + L++SA D ++IWD F
Sbjct: 83 APTKNKRTPGE--WIPRPPEKFSLTGHRASITRVIFHPIFA-LMVSASEDATIRIWD-FE 138
Query: 329 SGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETG-QVIRTFSTGKIPYV- 386
+G+ R+ GH+ +V+D++F G + S D +IK WD + + I+T G V
Sbjct: 139 TGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMH-GHDHNVS 197
Query: 387 -VKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSS 445
V P D +L+ D+ I W++ T + Y H V + F T S
Sbjct: 198 SVAFVPAGD---YVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCS 254
Query: 446 DDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA---AQSLDNQ-------ILI 495
+D+++RVW K H H++ I+ P A A DN+ L
Sbjct: 255 NDQTIRVWLTNSKDC-KVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLA 313
Query: 496 YSTRER-FQL-NKKKRFAGHIVAGYACQVN---FSPDGRFVMSGDGEGKCWFWDWKSCKV 550
+R++ ++ + ++G+ V F P G++++S + WD ++ +
Sbjct: 314 SGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRC 373
Query: 551 FRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+TL H+ C ++H V + D +K W+
Sbjct: 374 MKTLYAHQHFCTSIDFHKAHPY-VISGSVDQTVKVWE 409
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 44/172 (25%), Positives = 74/172 (43%)
Query: 248 HVEDKSTFHGKEEKDYQGRSWVAPPKDAKAA-NDHCYIPKRLVHTWSGHTKGVS-AIRFF 305
H+E S F D R W+ KD K DH + + + ++ A
Sbjct: 244 HIEG-SIF-ATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGAD 301
Query: 306 PKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYD 361
K GH + S D ++IWDV + G C+ T GH VR ++F G ++AS D
Sbjct: 302 NKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDD 360
Query: 362 KNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN-ILLAGMSDKKIVQWD 412
K I+ WD + ++T + + + D K + +++G D+ + W+
Sbjct: 361 KTIRVWDLRNKRCMKTLYAHQ-HFCTSI--DFHKAHPYVISGSVDQTVKVWE 409
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 211 (79.3 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 75/308 (24%), Positives = 127/308 (41%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P++ + T V A+RF G+ L+ G D +K+W+ G +RTY GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVD-GNYCLTCGSDKTLKLWNPLR-GTLLRTYSGHGYEV 70
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
D + D + + DK + WD +GQV+R F GK+ V+ N ++ ++L+
Sbjct: 71 LDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TVQFN---EEATVILS 126
Query: 402 GMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
G D I WD ++ E Q D+ V+++ D+ + S D +R ++ +
Sbjct: 127 GSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSVKVSDHE--ILAGSVDGRVRRYDLRMGQ 184
Query: 460 VIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
+ Y+ P + + SLD+ + + L + K GH Y
Sbjct: 185 LFSDYVGSP----ITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYK---GHKNQEY 237
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
S V+S +GK +FWD + L GV +HP E + G
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEPCLLTAMG 297
Query: 579 WDGLIKYW 586
G ++ W
Sbjct: 298 --GSVQCW 303
Score = 190 (71.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 61/249 (24%), Positives = 114/249 (45%)
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI--PV 459
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPE 144
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
++ + E + S+ + + + A S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGVSSVKVSDHE--ILAGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 578
C FS DG+ + + D + ++ K H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCS 254
Query: 579 WDGLIKYWD 587
DG + +WD
Sbjct: 255 EDGKVFFWD 263
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 211 (79.3 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 82/312 (26%), Positives = 134/312 (42%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH+ V+ I PKY +ILSA D + +W D N G R+ GHS V D+
Sbjct: 10 TLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ ++D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGAWDGTLRLWDLTTGLTTRRF-VGHTKDVLSVAFSADNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L +G ++ C
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--SGDVINAL-C--- 240
Query: 524 FSPDGRFVMSGDGEG-KCWFWDWKSC------KVFRT-LKCHEGVCIGCEWHPLEQSKVA 575
FSP+ ++ + G K W + K +V T K C W Q+ A
Sbjct: 241 FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFA 300
Query: 576 TCGW-DGLIKYW 586
G+ D LI+ W
Sbjct: 301 --GYTDNLIRVW 310
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 218 (81.8 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 68/303 (22%), Positives = 124/303 (40%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
IP + H G +I F G L + G D VK+WD NSG +++ G +
Sbjct: 213 IPSTCANRIHAHEGGCGSIVFEYNSGTLF-TGGQDRAVKMWDT-NSGTLIKSLYGSLGNI 270
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGM 403
D++ +D + A+ N+ WD +G+V T TG V ++ +++
Sbjct: 271 LDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTL-TGHTDKVCAVDVSKFSSRHVVSAA 329
Query: 404 SDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 463
D+ I WD++ T N I + + D +LR+W+ ++
Sbjct: 330 YDRTIKLWDLHKGYCTNTV-LFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSE 388
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
++ H ++ S+SL N N + DN ++ TR ++ R +G+ +A +
Sbjct: 389 VAG-HSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRT-LEICGTLRASGNRLASNWSRSC 446
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 583
SPD +V +G +G W + LK + C W + + +A+ +G +
Sbjct: 447 ISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKP-LASADKNGYV 505
Query: 584 KYW 586
W
Sbjct: 506 CTW 508
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 218 (81.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 77/283 (27%), Positives = 114/283 (40%)
Query: 267 SWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDV 326
S + P K + P +L SGH V I P ++ D +KIWD+
Sbjct: 177 SALVPKKAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDL 235
Query: 327 FNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-- 384
SGK + GH VR + + DK +K WD E +VIR + G +
Sbjct: 236 A-SGKLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAV 293
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
Y + L+P D +L+ D WD+ TK H AV T+ + VT
Sbjct: 294 YGLDLHPTID---VLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTG 350
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
S D ++R+W+ + + H S+ ++ LHP A+ S DN I + +
Sbjct: 351 SHDTTIRLWDL-VAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDN-IKQWKFPDG--- 405
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
N + +GH VN DG V SG G WDW++
Sbjct: 406 NFIQNLSGHNAIINTLTVN--SDGVLV-SGADNGTMHLWDWRT 445
Score = 140 (54.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 46/177 (25%), Positives = 81/177 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K VHT SGHT V+ ++ ++ + DT +++WD+ +GK T H K+VR
Sbjct: 322 KASVHTLSGHTNAVATVKCQAAEPQVV-TGSHDTTIRLWDLV-AGKTRVTLTNHKKSVRA 379
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ F + S D NIK W G I+ S G + L + D +L++G +
Sbjct: 380 VILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLS-GHNAIINTLTVNSD--GVLVSGADN 435
Query: 406 KKIVQWDMNTKEITQEYDQHL--GAVNT------ITFVDNNRRFVTSSDDKSLRVWE 454
+ WD T Q + G++++ F + R +T+ DK+++V++
Sbjct: 436 GTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTIKVYK 492
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 72/303 (23%), Positives = 133/303 (43%)
Query: 291 TWSGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
T +GH+K ++ + + P + + + S+ D V++WD +G+C R GH+++V +
Sbjct: 194 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDT-TAGRCERILTGHTQSVTCL 252
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+ DG + +AS D+ IK W G + RT G +V + D L G +
Sbjct: 253 RWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWVNTMALSTDYA--LRTGAFEP 308
Query: 407 KIVQWDMNTKEIT---QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 463
+ +N +++ +E + + + R V+ SDD +L +W
Sbjct: 309 --AEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLA 366
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + + P++ +A+ S D I ++ R L + GH+ A Y Q+
Sbjct: 367 RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR---GHVAAVY--QIA 421
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 583
+S D R ++SG + WD K+ K+ L H +W P + +VA+ G D +
Sbjct: 422 WSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSP-DGQRVASGGKDKCL 480
Query: 584 KYW 586
+ W
Sbjct: 481 RIW 483
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 74/305 (24%), Positives = 121/305 (39%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF-- 348
T GH V +I + P G + S + +V +WD + RT GHSK + +S+
Sbjct: 151 TCKGHRHWVLSISWSPD-GKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEP 209
Query: 349 --CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
N +++ ++S D +++ WDT G+ R TG V L D +L + D
Sbjct: 210 LHMNPECRYVASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTCLRWGGD--GLLYSASQD 266
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ I W + + + H VNT+ + + + V + +K +
Sbjct: 267 RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELK 326
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK--RFAGHIVAGYACQVN 523
E S ++ L + S D + ++S E +KK R GH QV
Sbjct: 327 E-RASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKPLARMTGH--QALINQVL 379
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGL 582
FSPD R V S + WD ++ K +L+ H W S++ G D
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA--DSRLLVSGSSDST 437
Query: 583 IKYWD 587
+K WD
Sbjct: 438 LKVWD 442
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 69/309 (22%), Positives = 130/309 (42%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GH++ V ++ F P G + S DT V+ WD+ T GH V I
Sbjct: 105 RCTSSLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSI 162
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETG-QVIRTFSTGKIPYVVKLNPDDDKQN----ILLA 401
S+ DG K + + + WD TG QV RT TG ++ L+ + N + +
Sbjct: 163 SWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTL-TGHSKWITGLSWEPLHMNPECRYVAS 221
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
D + WD + H +V + + + + ++S D++++VW V+
Sbjct: 222 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLC 280
Query: 462 KYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 519
+ + + H H + +++L +T++ L + + + ++ + L + K A + Y
Sbjct: 281 RTL-QGHGHWVNTMAL--STDYALRTGAFEPAEATVNAQDLQGSLKELKERAS---SRYN 334
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
P+ R V SG + + W + K + H+ + + P + VA+
Sbjct: 335 LVRGQGPE-RLV-SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRIVASAS 391
Query: 579 WDGLIKYWD 587
+D IK WD
Sbjct: 392 FDKSIKLWD 400
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 217 (81.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 72/303 (23%), Positives = 133/303 (43%)
Query: 291 TWSGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
T +GH+K ++ + + P + + + S+ D V++WD +G+C R GH+++V +
Sbjct: 196 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDT-TAGRCERILTGHTQSVTCL 254
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+ DG + +AS D+ IK W G + RT G +V + D L G +
Sbjct: 255 RWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQ-GHGHWVNTMALSTDYA--LRTGAFEP 310
Query: 407 KIVQWDMNTKEIT---QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 463
+ +N +++ +E + + + R V+ SDD +L +W
Sbjct: 311 --AEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLA 368
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + + P++ +A+ S D I ++ R L + GH+ A Y Q+
Sbjct: 369 RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLR---GHVAAVY--QIA 423
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 583
+S D R ++SG + WD K+ K+ L H +W P + +VA+ G D +
Sbjct: 424 WSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSP-DGQRVASGGKDKCL 482
Query: 584 KYW 586
+ W
Sbjct: 483 RIW 485
Score = 164 (62.8 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 73/305 (23%), Positives = 121/305 (39%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF-- 348
T GH V +I + P G + S + ++ +WD + RT GHSK + +S+
Sbjct: 153 TCKGHRHWVLSISWSPD-GKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEP 211
Query: 349 --CNDGTKFL-TASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
N +++ ++S D +++ WDT G+ R TG V L D +L + D
Sbjct: 212 LHMNPECRYVASSSKDGSVRVWDTTAGRCERIL-TGHTQSVTCLRWGGD--GLLYSASQD 268
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ I W + + + H VNT+ + + + V + +K +
Sbjct: 269 RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELK 328
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK--RFAGHIVAGYACQVN 523
E S ++ L + S D + ++S E +KK R GH QV
Sbjct: 329 E-RASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKPLARMTGH--QALINQVL 381
Query: 524 FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW-DGL 582
FSPD R V S + WD ++ K +L+ H W S++ G D
Sbjct: 382 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA--DSRLLVSGSSDST 439
Query: 583 IKYWD 587
+K WD
Sbjct: 440 LKVWD 444
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 70/309 (22%), Positives = 130/309 (42%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GH++ V ++ F P G + S DT V+ WD+ T GH V I
Sbjct: 107 RCTSSLEGHSEAVISVAFSPT-GKYLASGSGDTTVRFWDLSTETPHF-TCKGHRHWVLSI 164
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETG-QVIRTFSTGKIPYVVKLNPDDDKQN----ILLA 401
S+ DG K + + I WD TG QV RT TG ++ L+ + N + +
Sbjct: 165 SWSPDGKKLASGCKNGQILLWDPSTGTQVGRTL-TGHSKWITGLSWEPLHMNPECRYVAS 223
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
D + WD + H +V + + + + ++S D++++VW V+
Sbjct: 224 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLY-SASQDRTIKVWRAHDGVLC 282
Query: 462 KYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYA 519
+ + + H H + +++L +T++ L + + + ++ + L + K A + Y
Sbjct: 283 RTL-QGHGHWVNTMAL--STDYALRTGAFEPAEATVNAQDLQGSLKELKERAS---SRYN 336
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWD-WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
P+ R V SG + + W + K + H+ + + P + VA+
Sbjct: 337 LVRGQGPE-RLV-SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRIVASAS 393
Query: 579 WDGLIKYWD 587
+D IK WD
Sbjct: 394 FDKSIKLWD 402
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 217 (81.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 81/310 (26%), Positives = 144/310 (46%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSK 341
K+L T GHTK ++ + + P + + + S+ D+ ++IWD S K + + GH+
Sbjct: 215 KQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDT-ESCKNLMSLSGHTM 273
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
+V + + +G + + S D+ ++ ++T G+++R G +V L + D +L
Sbjct: 274 SVTCLKWGGEGLIY-SGSQDRTVRVFNTTDGRLVRVLD-GHAHWVNTLALNTDY--VLRT 329
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS-SDDKSLRVWEFGIPVV 460
G D ++D T E Q L N + + S SDD ++ +W P V
Sbjct: 330 GSYDHTGKEYD--TLEEAQRVA--LERYNDVKAKSKGMEILISGSDDFTVIMWN---PSV 382
Query: 461 IKY-ISE--PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVA 516
K IS H + +S P+ + A+ S D I ++ + +F N F GH+ A
Sbjct: 383 TKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGN----FRGHVGA 438
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 576
Y QV +S D R+++SG + WD K+ K+ + L H +W P + +VA+
Sbjct: 439 VY--QVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSP-DGDRVAS 495
Query: 577 CGWDGLIKYW 586
D L++ W
Sbjct: 496 GSKDRLLRIW 505
Score = 177 (67.4 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 74/307 (24%), Positives = 132/307 (42%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + SGHT+ V F P G +S G DT V+IWD++ S T GH+ V +
Sbjct: 131 RCASSMSGHTEAVLNCAFSPD-GKGFVSVGGDTTVRIWDIYTSTPT-HTLKGHTNWVLQV 188
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN---ILLAGM 403
++ D K TA + +I+ W +TG+ + + G ++ L+ + N + LA
Sbjct: 189 AWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASS 248
Query: 404 S-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
S D I WD + + H +V + + + + S D+++RV+ +++
Sbjct: 249 SKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIY-SGSQDRTVRVFNTTDGRLVR 307
Query: 463 YISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQ 521
+ + H H + +++L NT++ L S D+ Y T E Q +R+ + A
Sbjct: 308 VL-DGHAHWVNTLAL--NTDYVLRTGSYDHTGKEYDTLEEAQRVALERY-NDVKAK---- 359
Query: 522 VNFSPDGRFVMSGDGEGKCWFWDWKSCKV-FRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
S ++SG + W+ K L H+ + + P + A+ +D
Sbjct: 360 ---SKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSP-DGRYFASASFD 415
Query: 581 GLIKYWD 587
IK WD
Sbjct: 416 KSIKLWD 422
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 222 (83.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 66/276 (23%), Positives = 125/276 (45%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P++ + GH V +++ P G I S G D ++++W KC H A+R
Sbjct: 78 PQQRPFKFVGHKGAVYCVKYSPD-GETIASCGQDRQIRLWQNTVQSKCS-IIKAHCGAIR 135
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVK--LNPDDDKQNILLAG 402
+SF DG L++S DK +K W + + + +F+ G +V ++PD ++ +G
Sbjct: 136 SMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFA-GHKNWVRSGVISPD---MRLVASG 191
Query: 403 MSDKKIVQWDMNTKEITQEYD---------------QHLGAVNTITFVDNNRRFVTSSDD 447
DK ++ WD+N ++I +Y H+ V+ + F + ++SS D
Sbjct: 192 SDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFD 251
Query: 448 KSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK 507
+++ + +I++ + H + SIS+HP +LA+ D++I I+ R+ Q+
Sbjct: 252 HKIKITDIRSNKLIQHYNA-HDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTL 310
Query: 508 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFW 543
I V F+ G + +G + C W
Sbjct: 311 YSNDKDITT-----VQFNQSGDYFATGGSQNLCMVW 341
Score = 171 (65.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 64/282 (22%), Positives = 113/282 (40%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L ++ GH ++ F PK + S D+ V +W+ F + ++GH AV +
Sbjct: 39 LSRSFRGHEDIITCADFDPKMRQ-VASCSKDSIVYVWN-FKPQQRPFKFVGHKGAVYCVK 96
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
+ DG + D+ I+ W T Q + + ++ D LL+ DK
Sbjct: 97 YSPDGETIASCGQDRQIRLWQN-TVQSKCSIIKAHCGAIRSMSFSADG-GYLLSSSDDKT 154
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKY--- 463
+ W + K+ + H V + + R + SDDK++ +W+ +V KY
Sbjct: 155 LKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTL 214
Query: 464 -----ISE-----PHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKK-KRFAG 512
IS+ HM ++ + HP+ L + S D++I I R NK + +
Sbjct: 215 DDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRS----NKLIQHYNA 270
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 554
H ++ P G F+ S + K WD + + TL
Sbjct: 271 H--DAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTL 310
Score = 160 (61.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 62/267 (23%), Positives = 113/267 (42%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK-IPYVVKLNPD 392
R++ GH + F + + S D + W+ + Q F K Y VK +PD
Sbjct: 41 RSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPD 100
Query: 393 DDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
+ I G D++I W + H GA+ +++F + ++SSDDK+L++
Sbjct: 101 GE--TIASCGQ-DRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKL 157
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILI-----------YSTRE- 500
W + + H + + S + P+ +A+ S D +++ YST +
Sbjct: 158 WRLQDKKFMCSFAG-HKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDD 216
Query: 501 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGV 560
++++ ++ H+ QV F PDG ++S + K D +S K+ + H+
Sbjct: 217 NVKISQINSYSDHMDT--VSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQ 274
Query: 561 CIGCEWHPLEQSKVATCGWDGLIKYWD 587
HP +A+ G D IK WD
Sbjct: 275 VNSISIHPTGYF-LASAGSDSKIKIWD 300
Score = 42 (19.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 51 TTLALT-VAQARQTQSRPIDPSQHVVAYNPTYEQLWAPIYGPAHPYAKDGIAQGMRNHKL 109
TT+A + VA +QTQS+ + S + T++ P + +D I + K+
Sbjct: 4 TTIASSAVASQKQTQSKLGNTSSKITEQQTTHD----PALSRSFRGHEDIITCADFDPKM 59
Query: 110 GFVEDASIDSFVF 122
V S DS V+
Sbjct: 60 RQVASCSKDSIVY 72
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 77/315 (24%), Positives = 131/315 (41%)
Query: 244 EKGEHVED-KS---TFHGKEEKD-YQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKG 298
EK +ED KS T + K D R+ + + + P +L+ SGHT
Sbjct: 150 EKRRKIEDDKSSQITIYNKTNTDDINNRTLINQYEPLTYTKPEWHPPWKLMRVISGHTGW 209
Query: 299 VSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTA 358
V AI K + D +K+WD+ SG+ T GH A+R + + +
Sbjct: 210 VRAIAV-DKSNEWFATGSTDNTIKVWDLA-SGELKVTLTGHVSAIRGLEVSSRHPYLFSV 267
Query: 359 SYDKNIKYWDTETGQVIRTFSTGKIP-YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKE 417
D + WD E+ + +R + + Y V L+P D +L +G D + WDM T+
Sbjct: 268 GEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLD---VLFSGGRDNCVRVWDMRTRA 324
Query: 418 ITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISL 477
E H G + ++ + + + ++ S D ++++W+ ++ H + S+ +
Sbjct: 325 NIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTN-HKKGVRSMVI 383
Query: 478 HPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 537
H A + DN I + + + K +GH A +N D V GD
Sbjct: 384 HEKEYSFATGAADN-IKQWKCPDGSFI---KNLSGHNSIINAMALN--ADNVLVSGGDN- 436
Query: 538 GKCWFWDWKSCKVFR 552
G FWDWK+ F+
Sbjct: 437 GSISFWDWKTGYCFQ 451
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 221 (82.9 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 56/215 (26%), Positives = 110/215 (51%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH +++ + P G +++A D K+K+WD+ SG C+ T+ H+ +V + F G
Sbjct: 343 GHFDSTNSLAYSPD-GSRVVTASEDGKIKVWDI-TSGFCLATFEEHTSSVTAVQFAKRGQ 400
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFS-TGKIPY-VVKLNPDDDKQNILLAGMSDK-KIVQ 410
++S D ++ WD + RTF+ T +I + + ++P + ++ AG D I
Sbjct: 401 VMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPSGE---VVCAGSLDNFDIHV 457
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE-FGIPVVIKYISEPHM 469
W + T ++ H G V+ ++F N ++S DK++R+W FG ++ I E +
Sbjct: 458 WSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPI-EVYS 516
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
+ ++S+ P+ +A +L QI I++ + Q+
Sbjct: 517 DVL-ALSMRPDGKEVAVSTLKGQISIFNIEDAKQV 550
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 50/254 (19%), Positives = 104/254 (40%)
Query: 336 YMGHSKAVRDISFCNDGTKFLTASYDKN-IKYWDTETGQVIRTFSTGKIPY-VVKLNPDD 393
Y +K V+ ++F + T+ L + + +D +I+ S G+ P V +N
Sbjct: 257 YANQAK-VKCVTF-HPATRLLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTVSVNQTG 314
Query: 394 DKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
+ + + + +W + + Q+ H + N++ + + R VT+S+D ++VW
Sbjct: 315 EWLAFGSSKLGQLLVYEWQSESYILKQQ--GHFDSTNSLAYSPDGSRVVTASEDGKIKVW 372
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
+ + E H S+ ++ + + SLD + + + + + F G
Sbjct: 373 DITSGFCLATFEE-HTSSVTAVQFAKRGQVMFSSSLDGTVRAW---DLIRYRNFRTFTGT 428
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQS 572
+ C + P G V +G + W ++ ++ L HEG + C E S
Sbjct: 429 ERIQFNC-LAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGP-VSCLSFSQENS 486
Query: 573 KVATCGWDGLIKYW 586
+A+ WD I+ W
Sbjct: 487 VLASASWDKTIRIW 500
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 216 (81.1 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 77/306 (25%), Positives = 136/306 (44%)
Query: 293 SGHTKGVSAIRFFPKYGH----LILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+GH+K ++ + + P + + + SA D ++IWD G+C + GH+++V + +
Sbjct: 209 TGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTL-MGRCDKILTGHTQSVTCVKW 267
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGM---SD 405
DG + ++S D+ IK W ++ G + RT G +V + D +L G ++
Sbjct: 268 GGDGLLY-SSSQDRTIKVWRSQDGILCRTLQ-GHAHWVNTMALSTDY--VLRTGAFEPAE 323
Query: 406 KKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKY 463
I DM+ E+ + Q V R V+ SDD +L +W P K
Sbjct: 324 ATINPQDMSGSLAELKDKAQQRYDKVRG----QGPERLVSGSDDFTLFLWR---PAEDKK 376
Query: 464 ISEP---HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
E H + + P+T +A+ S D I ++ R L + GH+ A Y
Sbjct: 377 PLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLR---GHVSAVY-- 431
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
Q+ +S D R ++SG + WD ++ K+ L H +W P + +VA+ G D
Sbjct: 432 QIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSP-DGQRVASGGKD 490
Query: 581 GLIKYW 586
++ W
Sbjct: 491 KCLRIW 496
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 47/195 (24%), Positives = 85/195 (43%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + GHT+ V ++ F P G + S DT V+ WD+ ++ T GH V I
Sbjct: 118 RCTSSLEGHTEAVISVAFSPT-GKYLASGSGDTTVRFWDL-STETPQFTAKGHRHWVLSI 175
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKL--NP--DDDKQNILLAG 402
++ DG K + + I WD TG I TG ++ L P + + L +
Sbjct: 176 AWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASA 235
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D I WD + H +V + + + + +SS D++++VW ++ +
Sbjct: 236 SKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDGLLY-SSSQDRTIKVWRSQDGILCR 294
Query: 463 YISEPHMHSMPSISL 477
+ + H H + +++L
Sbjct: 295 TL-QGHAHWVNTMAL 308
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 216 (81.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 80/299 (26%), Positives = 123/299 (41%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P +L SGH V I P ++ D +KIWD+ SGK + GH VR
Sbjct: 193 PWKLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLA-SGKLKLSLTGHISTVR 250
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAG 402
+ + DK +K WD E +VIR + G + Y + L+P D +L+
Sbjct: 251 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGLDLHPTID---VLVTC 306
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D WD+ TK H AV T+ + +T S D ++R+W+ + +
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL-VAGKTR 365
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
H S+ ++ LHP A+ S DN I + + + + +GH V
Sbjct: 366 VTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFI---QNLSGHNAIINTLTV 421
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE-QSKVATCGWD 580
N DG V SG G WDW++ F+ + H V G L+ +S + C +D
Sbjct: 422 N--SDGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS----LDSESGIFACAFD 471
Score = 144 (55.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/176 (27%), Positives = 80/176 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K VHT SGHT V+ +R +I + DT +++WD+ +GK T H K+VR
Sbjct: 320 KASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLV-AGKTRVTLTNHKKSVRA 377
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ F + S D NIK W G I+ S G + L + D +L++G +
Sbjct: 378 VVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLS-GHNAIINTLTVNSD--GVLVSGADN 433
Query: 406 KKIVQWDMNTKEITQEYDQHL--GAVNT------ITFVDNNRRFVTSSDDKSLRVW 453
+ WD T Q + G++++ F + R +T+ DK+++V+
Sbjct: 434 GTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVY 489
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 216 (81.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 80/299 (26%), Positives = 123/299 (41%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P +L SGH V I P ++ D +KIWD+ SGK + GH VR
Sbjct: 194 PWKLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLA-SGKLKLSLTGHISTVR 251
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAG 402
+ + DK +K WD E +VIR + G + Y + L+P D +L+
Sbjct: 252 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGLDLHPTID---VLVTC 307
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D WD+ TK H AV T+ + +T S D ++R+W+ + +
Sbjct: 308 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL-VAGKTR 366
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
H S+ ++ LHP A+ S DN I + + + + +GH V
Sbjct: 367 VTLTNHKKSVRAVVLHPRHYTFASGSPDN-IKQWKFPDGSFI---QNLSGHNAIINTLTV 422
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE-QSKVATCGWD 580
N DG V SG G WDW++ F+ + H V G L+ +S + C +D
Sbjct: 423 N--SDGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS----LDSESGIFACAFD 472
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/177 (27%), Positives = 81/177 (45%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K VHT SGHT V+ +R +I + DT +++WD+ +GK T H K+VR
Sbjct: 321 KASVHTLSGHTNAVATVRCQAAEPQII-TGSHDTTIRLWDLV-AGKTRVTLTNHKKSVRA 378
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ F + S D NIK W G I+ S G + L + D +L++G +
Sbjct: 379 VVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLS-GHNAIINTLTVNSD--GVLVSGADN 434
Query: 406 KKIVQWDMNTKEITQEYDQHL--GAVNT------ITFVDNNRRFVTSSDDKSLRVWE 454
+ WD T Q + G++++ F + R +T+ DK+++V++
Sbjct: 435 GTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTIKVYK 491
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 217 (81.4 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 56/170 (32%), Positives = 87/170 (51%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H GH V+A+R G ++S D VK+WD + C+ T GH+ V + F
Sbjct: 374 LHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDP-ETETCLHTLQGHTNRVYSLQF 429
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG ++ S D +I+ WD ETG I T TG + + K NIL++G +D +
Sbjct: 430 --DGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGM---ELKDNILVSGNADSTV 483
Query: 409 VQWDMNTKEITQEY---DQHLGAVNTITFVDNNRRFV-TSSDDKSLRVWE 454
WD+ T + Q ++H AV + F N+ FV TSSDD ++++W+
Sbjct: 484 KIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFVITSSDDGTVKLWD 530
Score = 192 (72.6 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ I+S D +K+W +GKC+RT +GH+ V S D ++ S D+ +K W+
Sbjct: 271 GNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWS-SQMRDNI-IISGSTDRTLKVWN 327
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
ETG+ I T G V ++ + + +++G D + WD+ T + H+ A
Sbjct: 328 AETGECIHTLY-GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAA 383
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + + + RR V+ + D ++VW+ P + H+ SL + + + S
Sbjct: 384 VRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 438
Query: 489 LDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
LD I ++ N GH + +G + N ++SG+ + WD K
Sbjct: 439 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDNI------LVSGNADSTVKIWDIK 489
Query: 547 SCKVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + +TL+ H+ + C ++ V T DG +K WD
Sbjct: 490 TGQCLQTLQGPNKHQSA-VTCL--QFNKNFVITSSDDGTVKLWD 530
Score = 170 (64.9 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 62/258 (24%), Positives = 109/258 (42%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
++I+S D +K+W+ +G+C+ T GH+ VR + + ++ S D ++ WD
Sbjct: 312 NIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDI 368
Query: 370 ETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV 429
ETGQ + G + V + D + +++G D + WD T+ H V
Sbjct: 369 ETGQCLHVLM-GHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 424
Query: 430 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 489
++ F + V+ S D S+RVW+ I ++ H + L N L + +
Sbjct: 425 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMELKDNI--LVSGNA 479
Query: 490 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 549
D+ + I+ + L + H A Q N + FV++ +G WD K+ +
Sbjct: 480 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN----FVITSSDDGTVKLWDLKTGE 535
Query: 550 VFRTLKCHE-GVCIGCEW 566
R L E G G W
Sbjct: 536 FIRNLVTLESGGSGGVVW 553
Score = 134 (52.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT +GH S + ++++S D+ VKIWD+ +G+C++T G +K ++
Sbjct: 454 IHTLTGHQSLTSGMEL---KDNILVSGNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTC 509
Query: 349 CNDGTKF-LTASYDKNIKYWDTETGQVIRTFST 380
F +T+S D +K WD +TG+ IR T
Sbjct: 510 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 542
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 217 (81.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 76/307 (24%), Positives = 137/307 (44%)
Query: 267 SWVAPPKDAK--AANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
S+ + P++A+ +A +P +H + H V+A+RF P L+ + GMD +VK+W
Sbjct: 286 SFSSSPENAEVPSACADVRVPSTALHIFDAHDGEVNAVRFSPG-SRLLATGGMDRRVKLW 344
Query: 325 DVFNSGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGK 382
+V SG+C G + + I F + G+ L AS D + W + ++ T TG
Sbjct: 345 EVV-SGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL-TGH 402
Query: 383 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFV 442
V+ D I+ +G D+ + WD+ +K + + + N I V + +
Sbjct: 403 SGKVLSARFLLDNARIV-SGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDI--VCTEQCVM 459
Query: 443 TSSDDKSLRVWEFGIPV--VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
+ DK +R W+ + K +++ + + S+ L+ + L S D+ + I R
Sbjct: 460 SGHFDKKVRFWDISYQNYHIQKQLNK--LCRVTSLDLNHDRTELLTCSRDDLVKIIDLRT 517
Query: 501 RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL-KCHEG 559
+ + G +V FSPDG FV +G +G + W+ + K+ +TL K H
Sbjct: 518 N-AVRQTFNAQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSS 576
Query: 560 VCIGCEW 566
W
Sbjct: 577 AINSVSW 583
Score = 138 (53.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 49/216 (22%), Positives = 95/216 (43%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
RL HT +GH+ V + RF ++ S D +K+WD+ + M+T S DI
Sbjct: 394 RLRHTLTGHSGKVLSARFLLDNARIV-SGSYDRTLKLWDLRSKVCSMKTVFAGSSC-NDI 451
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
C + ++ +DK +++WD K+ V L+ + D+ +L D
Sbjct: 452 -VCTEQC-VMSGHFDKKVRFWDISYQNYHIQKQLNKLCRVTSLDLNHDRTELLTCSRDDL 509
Query: 407 -KIVQWDMNTKEITQEYDQH---LGAVNT-ITFVDNNRRFVTSSDDKSLRVWEFGIPVVI 461
KI+ D+ T + Q ++ G+ T +TF + S D L +W +
Sbjct: 510 VKII--DLRTNAVRQTFNAQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLE 567
Query: 462 KYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 497
K + + H ++ S+S + ++A+ ++ +++S
Sbjct: 568 KTLDKGHSSAINSVSWSLSGAFVASVEKGSKAVLWS 603
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 303 TDNLVRVW 310
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 70 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 129 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 182
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 183 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 241 -FSP---NRYWLCAATGPSIKIWD 260
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 217 (81.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 56/170 (32%), Positives = 87/170 (51%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H GH V+A+R G ++S D VK+WD + C+ T GH+ V + F
Sbjct: 414 LHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDP-ETETCLHTLQGHTNRVYSLQF 469
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG ++ S D +I+ WD ETG I T TG + + K NIL++G +D +
Sbjct: 470 --DGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGM---ELKDNILVSGNADSTV 523
Query: 409 VQWDMNTKEITQEY---DQHLGAVNTITFVDNNRRFV-TSSDDKSLRVWE 454
WD+ T + Q ++H AV + F N+ FV TSSDD ++++W+
Sbjct: 524 KIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFVITSSDDGTVKLWD 570
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ I+S D +K+W +GKC+RT +GH+ V S D ++ S D+ +K W+
Sbjct: 311 GNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWS-SQMRDNI-IISGSTDRTLKVWN 367
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
ETG+ I T G V ++ + + +++G D + WD+ T + H+ A
Sbjct: 368 AETGECIHTLY-GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAA 423
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + + + RR V+ + D ++VW+ P + H+ SL + + + S
Sbjct: 424 VRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 478
Query: 489 LDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
LD I ++ N GH + +G + N ++SG+ + WD K
Sbjct: 479 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDNI------LVSGNADSTVKIWDIK 529
Query: 547 SCKVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + +TL+ H+ + C ++ V T DG +K WD
Sbjct: 530 TGQCLQTLQGPNKHQSA-VTCL--QFNKNFVITSSDDGTVKLWD 570
Score = 170 (64.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 62/258 (24%), Positives = 109/258 (42%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
++I+S D +K+W+ +G+C+ T GH+ VR + + ++ S D ++ WD
Sbjct: 352 NIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDI 408
Query: 370 ETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV 429
ETGQ + G + V + D + +++G D + WD T+ H V
Sbjct: 409 ETGQCLHVLM-GHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 464
Query: 430 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 489
++ F + V+ S D S+RVW+ I ++ H + L N L + +
Sbjct: 465 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMELKDNI--LVSGNA 519
Query: 490 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 549
D+ + I+ + L + H A Q N + FV++ +G WD K+ +
Sbjct: 520 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN----FVITSSDDGTVKLWDLKTGE 575
Query: 550 VFRTLKCHE-GVCIGCEW 566
R L E G G W
Sbjct: 576 FIRNLVTLESGGSGGVVW 593
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT +GH S + ++++S D+ VKIWD+ +G+C++T G +K ++
Sbjct: 494 IHTLTGHQSLTSGMEL---KDNILVSGNADSTVKIWDI-KTGQCLQTLQGPNKHQSAVTC 549
Query: 349 CNDGTKF-LTASYDKNIKYWDTETGQVIRTFST 380
F +T+S D +K WD +TG+ IR T
Sbjct: 550 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 582
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 78/308 (25%), Positives = 127/308 (41%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 73 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIV-SGSRDK 130
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + + H V+ + F N N V+ DK ++VW +K
Sbjct: 131 TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA-NCKLKT 189
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G I+ N
Sbjct: 190 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPN 247
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + K + + K C W Q+ A G+
Sbjct: 248 RYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFA--GY 305
Query: 580 -DGLIKYW 586
D L++ W
Sbjct: 306 TDNLVRVW 313
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 71/264 (26%), Positives = 109/264 (41%)
Query: 335 TYMGHSKAVRDISFCND-GTKFLTASYDKNIKYWDT---ETGQVI-RTFSTGKIPYVVKL 389
T GH+ V I+ L+AS DK I W ET I + G +V +
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 390 NPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKS 449
D Q L+G D + WD+ T T+ + H V ++ F +NR+ V+ S DK+
Sbjct: 73 VISSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 131
Query: 450 LRVWE-FGIPVVIKYISEPHMHS--MPSISLHPNTN--WLAAQSLDNQILIYSTRERFQL 504
+++W G V KY + HS + + PN++ + + D + +++
Sbjct: 132 IKLWNTLG---VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN---C 185
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
K GH GY V SPDG SG +G+ WD K TL + + C
Sbjct: 186 KLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 243
Query: 565 EWHPLEQSKVATCGWDG-LIKYWD 587
+ P ++ C G IK WD
Sbjct: 244 -FSP---NRYWLCAATGPSIKIWD 263
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 219 (82.2 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 58/209 (27%), Positives = 99/209 (47%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V+ + + P L+ + D KVK+W+V SG C T+ H+ AV + F D
Sbjct: 387 GHYFDVNCVTYSPD-SQLLATGADDNKVKVWNVM-SGTCFITFTEHTNAVTALHFMADNH 444
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK-KIVQWD 412
L+AS D ++ WD + + +T++T V L D +++ AG D +I W
Sbjct: 445 SLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSG-DVVCAGTLDSFEIFVWS 503
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE-FGIPVVIKYISEPHMHS 471
T +I H V+ + F + +SS D ++R+W+ F ++ H H
Sbjct: 504 KKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFR--HNHD 561
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRE 500
+ +++ P+ LA+ +LD QI + T E
Sbjct: 562 VLTVAFRPDGKQLASSTLDGQINFWDTIE 590
Score = 140 (54.3 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 51/223 (22%), Positives = 99/223 (44%)
Query: 367 WDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL 426
W TET +++ V +PD +L G D K+ W++ + + +H
Sbjct: 376 WRTET-YILKQQGHYFDVNCVTYSPDSQ---LLATGADDNKVKVWNVMSGTCFITFTEHT 431
Query: 427 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAA 486
AV + F+ +N +++S D ++R W+F K + P S++ P+ + + A
Sbjct: 432 NAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCA 491
Query: 487 QSLDN-QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 545
+LD+ +I ++S ++ Q+ K +GH + FSP + + S + WD
Sbjct: 492 GTLDSFEIFVWS-KKTGQI--KDILSGHEAPVHGLM--FSPLTQLLASSSWDYTVRLWDV 546
Query: 546 KSCK-VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ K T + H + + P + ++A+ DG I +WD
Sbjct: 547 FASKGTVETFR-HNHDVLTVAFRP-DGKQLASSTLDGQINFWD 587
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 50/181 (27%), Positives = 81/181 (44%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
T++ HT V+A+ F H +LSA +D V+ WD F K +TY + + +S
Sbjct: 426 TFTEHTNAVTALHFMAD-NHSLLSASLDGTVRAWD-FKRYKNYKTYTTPTPR-QFVSLTA 482
Query: 351 D--GTKFLTASYDK-NIKYWDTETGQVIRTFSTGKIP-YVVKLNPDDDKQNILLAGMS-D 405
D G + D I W +TGQ+ S + P + + +P LLA S D
Sbjct: 483 DPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQ----LLASSSWD 538
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
+ WD+ + T E +H V T+ F + ++ +S+ D + W+ I V+ Y
Sbjct: 539 YTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDT-IEGVLMYTI 597
Query: 466 E 466
E
Sbjct: 598 E 598
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 41/197 (20%), Positives = 87/197 (44%)
Query: 393 DDKQNILLAGMSDK-KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR 451
+++ N L G + +++ WD T+ + H VN +T+ +++ T +DD ++
Sbjct: 355 NERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVK 414
Query: 452 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
VW +E H +++ ++ + + L + SLD + + + R++ K +
Sbjct: 415 VWNVMSGTCFITFTE-HTNAVTALHFMADNHSLLSASLDGTVRAWDFK-RYK--NYKTYT 470
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
+ + P G V +G + + + W K+ ++ L HE G + PL
Sbjct: 471 TPTPRQFV-SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLT 529
Query: 571 QSKVATCGWDGLIKYWD 587
Q +A+ WD ++ WD
Sbjct: 530 QL-LASSSWDYTVRLWD 545
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 216 (81.1 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 56/170 (32%), Positives = 86/170 (50%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H GH V+A+R G ++S D VK+WD + C+ T GH+ V + F
Sbjct: 416 LHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDP-ETETCLHTLQGHTNRVYSLQF 471
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG ++ S D +I+ WD ETG I T TG + + K NIL++G +D +
Sbjct: 472 --DGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGM---ELKDNILVSGNADSTV 525
Query: 409 VQWDMNTKEITQEYD---QHLGAVNTITFVDNNRRFV-TSSDDKSLRVWE 454
WD+ T + Q +H AV + F N+ FV TSSDD ++++W+
Sbjct: 526 KIWDIKTGQCLQTLQGPSKHQSAVTCLQF---NKNFVITSSDDGTVKLWD 572
Score = 192 (72.6 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ I+S D +K+W +GKC+RT +GH+ V S D ++ S D+ +K W+
Sbjct: 313 GNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWS-SQMRDNI-IISGSTDRTLKVWN 369
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
ETG+ I T G V ++ + + +++G D + WD+ T + H+ A
Sbjct: 370 AETGECIHTLY-GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAA 425
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + + + RR V+ + D ++VW+ P + H+ SL + + + S
Sbjct: 426 VRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 480
Query: 489 LDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
LD I ++ N GH + +G + N ++SG+ + WD K
Sbjct: 481 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDNI------LVSGNADSTVKIWDIK 531
Query: 547 SCKVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + +TL+ H+ + C ++ V T DG +K WD
Sbjct: 532 TGQCLQTLQGPSKHQSA-VTCL--QFNKNFVITSSDDGTVKLWD 572
Score = 171 (65.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 58/245 (23%), Positives = 106/245 (43%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
++I+S D +K+W+ +G+C+ T GH+ VR + + ++ S D ++ WD
Sbjct: 354 NIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDI 410
Query: 370 ETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV 429
ETGQ + G + V + D + +++G D + WD T+ H V
Sbjct: 411 ETGQCLHVLM-GHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 466
Query: 430 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 489
++ F + V+ S D S+RVW+ I ++ H + L N L + +
Sbjct: 467 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMELKDNI--LVSGNA 521
Query: 490 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 549
D+ + I+ + L + + H A Q N + FV++ +G WD K+ +
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN----FVITSSDDGTVKLWDLKTGE 577
Query: 550 VFRTL 554
R L
Sbjct: 578 FIRNL 582
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT +GH S + ++++S D+ VKIWD+ +G+C++T G SK ++
Sbjct: 496 IHTLTGHQSLTSGMEL---KDNILVSGNADSTVKIWDI-KTGQCLQTLQGPSKHQSAVTC 551
Query: 349 CNDGTKF-LTASYDKNIKYWDTETGQVIRTFST 380
F +T+S D +K WD +TG+ IR T
Sbjct: 552 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 584
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 212 (79.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 71/266 (26%), Positives = 128/266 (48%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P LIL+ G+ D ++KIW+V +G + GH VRD+SF +G+ L +AS DK
Sbjct: 119 PDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKT 177
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 178 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 233
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI-----------SEPHM 469
+ + H +V + F ++ VT+S D S+ +W+ ++ + S+ HM
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHM 293
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 294 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKAPVAFAP-MTNGLCC--TFFPHGG 346
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 347 VIATGTRDGHVQFWT--APRVLSSLK 370
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 150 SGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 209
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 210 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTSVIMWD 267
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW--EFGIP 458
T E TQ + D H+ ++ ++ F T +DD+ LR+W E P
Sbjct: 268 PYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALELKAP 327
Query: 459 V 459
V
Sbjct: 328 V 328
Score = 136 (52.9 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/146 (23%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S PN + L + S D + I+ +
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKH 186
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 187 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 242
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 243 VSCDFSP-DSALLVTASYDTSVIMWD 267
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 212 (79.7 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 72/266 (27%), Positives = 127/266 (47%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P LIL+ G+ D ++KIW+V +G + GH VRD+SF G+ L +AS DK
Sbjct: 119 PDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 177
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 178 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 233
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS----EP-------HM 469
+ + H +V + F ++ VT+S D S+ +W+ ++ + EP HM
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHM 293
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 294 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKAPVAFAP-MTNGLCC--TFFPHGG 346
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 347 IIATGTRDGHVQFWT--APRVLSSLK 370
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 48/181 (26%), Positives = 80/181 (44%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 209
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 210 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTSVIMWD 267
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW--EFGIP 458
T E TQ + D H+ ++ ++ F T +DD+ LR+W E P
Sbjct: 268 PYTGERLRSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIWALELKAP 327
Query: 459 V 459
V
Sbjct: 328 V 328
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S P+ + L + S D + I+ +
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKH 186
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 187 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 242
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 243 VSCDFSP-DSALLVTASYDTSVIMWD 267
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 216 (81.1 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 56/170 (32%), Positives = 86/170 (50%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+H GH V+A+R G ++S D VK+WD + C+ T GH+ V + F
Sbjct: 416 LHVLMGH---VAAVRCVQYDGRRVVSGAYDFMVKVWDP-ETETCLHTLQGHTNRVYSLQF 471
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG ++ S D +I+ WD ETG I T TG + + K NIL++G +D +
Sbjct: 472 --DGIHVVSGSLDTSIRVWDVETGNCIHTL-TGHQSLTSGM---ELKDNILVSGNADSTV 525
Query: 409 VQWDMNTKEITQEYD---QHLGAVNTITFVDNNRRFV-TSSDDKSLRVWE 454
WD+ T + Q +H AV + F N+ FV TSSDD ++++W+
Sbjct: 526 KIWDIKTGQCLQTLQGPSKHQSAVTCLQF---NKNFVITSSDDGTVKLWD 572
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ I+S D +K+W +GKC+RT +GH+ V S D ++ S D+ +K W+
Sbjct: 313 GNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWS-SQMRDNI-IISGSTDRTLKVWN 369
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
ETG+ I T G V ++ + + +++G D + WD+ T + H+ A
Sbjct: 370 AETGECIHTLY-GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAA 425
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + + + RR V+ + D ++VW+ P + H+ SL + + + S
Sbjct: 426 VRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 480
Query: 489 LDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
LD I ++ N GH + +G + N ++SG+ + WD K
Sbjct: 481 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDNI------LVSGNADSTVKIWDIK 531
Query: 547 SCKVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + +TL+ H+ + C ++ V T DG +K WD
Sbjct: 532 TGQCLQTLQGPSKHQSA-VTCL--QFNKNFVITSSDDGTVKLWD 572
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 62/258 (24%), Positives = 110/258 (42%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
++I+S D +K+W+ +G+C+ T GH+ VR + + ++ S D ++ WD
Sbjct: 354 NIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDI 410
Query: 370 ETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV 429
ETGQ + G + V + D + +++G D + WD T+ H V
Sbjct: 411 ETGQCLHVLM-GHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 466
Query: 430 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 489
++ F + V+ S D S+RVW+ I ++ H + L N L + +
Sbjct: 467 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMELKDNI--LVSGNA 521
Query: 490 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 549
D+ + I+ + L + + H A Q N + FV++ +G WD K+ +
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN----FVITSSDDGTVKLWDLKTGE 577
Query: 550 VFRTLKCHE-GVCIGCEW 566
R L E G G W
Sbjct: 578 FIRNLVTLESGGSGGVVW 595
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT +GH S + ++++S D+ VKIWD+ +G+C++T G SK ++
Sbjct: 496 IHTLTGHQSLTSGMEL---KDNILVSGNADSTVKIWDI-KTGQCLQTLQGPSKHQSAVTC 551
Query: 349 CNDGTKF-LTASYDKNIKYWDTETGQVIRTFST 380
F +T+S D +K WD +TG+ IR T
Sbjct: 552 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 584
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GHTK V+++ F P L+ SA D ++IW V N+ C++ H AV
Sbjct: 254 EQILATLKGHTKKVTSVVFHPSQ-ELVFSASPDATIRIWSVPNTS-CVQVVRAHESAVTG 311
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ + +G + +PD I G
Sbjct: 312 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG---LIFGTG 368
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGLTTGV 481
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 482 AFGHHAKFIAS 492
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 61/232 (26%), Positives = 101/232 (43%)
Query: 335 TYMG-HSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 387
+++G HS ++ I C +D K LT DKN+ +D T Q++ T T K+ VV
Sbjct: 212 SHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVV 271
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
+P Q ++ + D I W + Q H AV ++ ++SSDD
Sbjct: 272 -FHPS---QELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDD 327
Query: 448 KSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ W F I V+ K E S+ HP+ ++D+QI I+ +ER
Sbjct: 328 Q---YWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 384
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 385 V---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 431
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 47/210 (22%), Positives = 87/210 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK +V +D +T++I H V ++ F +
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQE 277
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H ++ +SLH ++L + S D+Q +S
Sbjct: 278 LVFSASPDATIRIWSVPNTSCVQVV-RAHESAVTGLSLHATGDYLLSSS-DDQYWAFSDI 335
Query: 500 ERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ ++ K +G C F PDG +G + + WD K H
Sbjct: 336 QTGRVLTKVTDETSG---CSLTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGH 391
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 392 SGPITSIAFSE-NGYYLATAADDSSVKLWD 420
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 287 RLVHTWSGHTKGVS--AIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAV 343
R++ + T G S +F P G LI G MD+++KIWD+ + + GHS +
Sbjct: 339 RVLTKVTDETSGCSLTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPI 395
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLA 401
I+F +G TA+ D ++K WD ++ F T ++ + VK D L
Sbjct: 396 TSIAFSENGYYLATAADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLAL 452
Query: 402 GMSDKKIV---QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
G +D +I QW EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 453 GGTDVQIYICKQWT----EILH-FTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFY 502
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 49/213 (23%), Positives = 91/213 (42%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
S G+ A+ P + IL+ G D V ++D ++ + + T GH+K V + F
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDK-STEQILATLKGHTKKVTSVVFHPSQ 276
Query: 353 TKFLTASYDKNIKYW---DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
+AS D I+ W +T QV+R + + L+ D LL+ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTG--LSLHATGD---YLLSSSDDQYWA 331
Query: 410 QWDMNT-KEITQEYDQHLGAVNTIT-FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
D+ T + +T+ D+ G T F + F T + D +++W+ +
Sbjct: 332 FSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG- 390
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GHTK V+++ F P L+ SA D ++IW V N+ C++ H AV
Sbjct: 254 EQILATLKGHTKKVTSVVFHPSQ-ELVFSASPDATIRIWSVPNTS-CVQVVRAHESAVTG 311
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ + +G + +PD I G
Sbjct: 312 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG---LIFGTG 368
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGLTTGV 481
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 482 AFGHHAKFIAS 492
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 61/232 (26%), Positives = 101/232 (43%)
Query: 335 TYMG-HSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 387
+++G HS ++ I C +D K LT DKN+ +D T Q++ T T K+ VV
Sbjct: 212 SHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVV 271
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
+P Q ++ + D I W + Q H AV ++ ++SSDD
Sbjct: 272 -FHPS---QELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDD 327
Query: 448 KSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ W F I V+ K E S+ HP+ ++D+QI I+ +ER
Sbjct: 328 Q---YWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 384
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 385 V---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 431
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 47/210 (22%), Positives = 87/210 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK +V +D +T++I H V ++ F +
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQE 277
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H ++ +SLH ++L + S D+Q +S
Sbjct: 278 LVFSASPDATIRIWSVPNTSCVQVV-RAHESAVTGLSLHATGDYLLSSS-DDQYWAFSDI 335
Query: 500 ERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ ++ K +G C F PDG +G + + WD K H
Sbjct: 336 QTGRVLTKVTDETSG---CSLTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGH 391
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 392 SGPITSIAFSE-NGYYLATAADDSSVKLWD 420
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 287 RLVHTWSGHTKGVS--AIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAV 343
R++ + T G S +F P G LI G MD+++KIWD+ + + GHS +
Sbjct: 339 RVLTKVTDETSGCSLTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPI 395
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLA 401
I+F +G TA+ D ++K WD ++ F T ++ + VK D L
Sbjct: 396 TSIAFSENGYYLATAADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLAL 452
Query: 402 GMSDKKIV---QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
G +D +I QW EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 453 GGTDVQIYICKQWT----EILH-FTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFY 502
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 49/213 (23%), Positives = 91/213 (42%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
S G+ A+ P + IL+ G D V ++D ++ + + T GH+K V + F
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDK-STEQILATLKGHTKKVTSVVFHPSQ 276
Query: 353 TKFLTASYDKNIKYW---DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
+AS D I+ W +T QV+R + + L+ D LL+ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTG--LSLHATGD---YLLSSSDDQYWA 331
Query: 410 QWDMNT-KEITQEYDQHLGAVNTIT-FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
D+ T + +T+ D+ G T F + F T + D +++W+ +
Sbjct: 332 FSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG- 390
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GHTK V+++ F P L+ SA D ++IW V N+ C++ H AV
Sbjct: 254 EQILATLKGHTKKVTSVVFHPSQ-ELVFSASPDATIRIWSVPNTS-CVQVVRAHESAVTG 311
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ + +G + +PD I G
Sbjct: 312 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG---LIFGTG 368
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGLTTGV 481
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 482 AFGHHAKFIAS 492
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 61/232 (26%), Positives = 101/232 (43%)
Query: 335 TYMG-HSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 387
+++G HS ++ I C +D K LT DKN+ +D T Q++ T T K+ VV
Sbjct: 212 SHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVV 271
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
+P Q ++ + D I W + Q H AV ++ ++SSDD
Sbjct: 272 -FHPS---QELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDD 327
Query: 448 KSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ W F I V+ K E S+ HP+ ++D+QI I+ +ER
Sbjct: 328 Q---YWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 384
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 385 V---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 431
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 47/210 (22%), Positives = 87/210 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK +V +D +T++I H V ++ F +
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQE 277
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H ++ +SLH ++L + S D+Q +S
Sbjct: 278 LVFSASPDATIRIWSVPNTSCVQVV-RAHESAVTGLSLHATGDYLLSSS-DDQYWAFSDI 335
Query: 500 ERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ ++ K +G C F PDG +G + + WD K H
Sbjct: 336 QTGRVLTKVTDETSG---CSLTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGH 391
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 392 SGPITSIAFSE-NGYYLATAADDSSVKLWD 420
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 287 RLVHTWSGHTKGVS--AIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAV 343
R++ + T G S +F P G LI G MD+++KIWD+ + + GHS +
Sbjct: 339 RVLTKVTDETSGCSLTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPI 395
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLA 401
I+F +G TA+ D ++K WD ++ F T ++ + VK D L
Sbjct: 396 TSIAFSENGYYLATAADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLAL 452
Query: 402 GMSDKKIV---QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
G +D +I QW EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 453 GGTDVQIYICKQWT----EILH-FTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFY 502
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 49/213 (23%), Positives = 91/213 (42%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
S G+ A+ P + IL+ G D V ++D ++ + + T GH+K V + F
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDK-STEQILATLKGHTKKVTSVVFHPSQ 276
Query: 353 TKFLTASYDKNIKYW---DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
+AS D I+ W +T QV+R + + L+ D LL+ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNTSCVQVVRAHESAVTG--LSLHATGD---YLLSSSDDQYWA 331
Query: 410 QWDMNT-KEITQEYDQHLGAVNTIT-FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
D+ T + +T+ D+ G T F + F T + D +++W+ +
Sbjct: 332 FSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG- 390
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GHTK V+++ F P L+ SA D ++IW V N+ C++ H AV
Sbjct: 254 EQILATLKGHTKKVTSVVFHPSQ-ELVFSASPDATIRIWSVPNAS-CVQVVRAHESAVTG 311
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ + +G + +PD I G
Sbjct: 312 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG---LIFGTG 368
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGVTTGV 481
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 482 AFGHHAKFIAS 492
Score = 167 (63.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 60/232 (25%), Positives = 101/232 (43%)
Query: 335 TYMG-HSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 387
+++G HS ++ I C +D K LT DKN+ +D + Q++ T T K+ VV
Sbjct: 212 SHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVV 271
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
+P Q ++ + D I W + Q H AV ++ ++SSDD
Sbjct: 272 -FHPS---QELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDD 327
Query: 448 KSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ W F I V+ K E S+ HP+ ++D+QI I+ +ER
Sbjct: 328 Q---YWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 384
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 385 V---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 431
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/210 (21%), Positives = 87/210 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK +V +D ++++I H V ++ F +
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQE 277
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H ++ +SLH ++L + S D+Q +S
Sbjct: 278 LVFSASPDATIRIWSVPNASCVQVV-RAHESAVTGLSLHATGDYLLSSS-DDQYWAFSDI 335
Query: 500 ERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ ++ K +G C F PDG +G + + WD K H
Sbjct: 336 QTGRVLTKVTDETSG---CSLTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGH 391
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 392 SGPITSIAFSE-NGYYLATAADDSSVKLWD 420
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 287 RLVHTWSGHTKGVS--AIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAV 343
R++ + T G S +F P G LI G MD+++KIWD+ + + GHS +
Sbjct: 339 RVLTKVTDETSGCSLTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPI 395
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLA 401
I+F +G TA+ D ++K WD ++ F T ++ + VK D L
Sbjct: 396 TSIAFSENGYYLATAADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLAL 452
Query: 402 GMSDKKIV---QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
G +D +I QW EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 453 GGTDVQIYICKQWT----EILH-FTEHSGVTTGVAF-GHHAKFIASTGMDRSLKFY 502
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 49/213 (23%), Positives = 89/213 (41%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
S G+ A+ P + IL+ G D V ++D +S + + T GH+K V + F
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDK-SSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 353 TKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
+AS D I+ W QV+R + + L+ D LL+ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNASCVQVVRAHESAVTG--LSLHATGD---YLLSSSDDQYWA 331
Query: 410 QWDMNT-KEITQEYDQHLGAVNTIT-FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
D+ T + +T+ D+ G T F + F T + D +++W+ +
Sbjct: 332 FSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG- 390
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 213 (80.0 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GHTK V+++ F P L+ SA D ++IW V N+ C++ H AV
Sbjct: 254 EQILATLKGHTKKVTSVVFHPSQ-ELVFSASPDATIRIWSVPNAS-CVQVVRAHESAVTG 311
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ + +G + +PD I G
Sbjct: 312 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG---LIFGTG 368
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGLTTGV 481
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 482 AFGHHAKFIAS 492
Score = 167 (63.8 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 60/232 (25%), Positives = 101/232 (43%)
Query: 335 TYMG-HSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 387
+++G HS ++ I C +D K LT DKN+ +D + Q++ T T K+ VV
Sbjct: 212 SHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVV 271
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
+P Q ++ + D I W + Q H AV ++ ++SSDD
Sbjct: 272 -FHPS---QELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDD 327
Query: 448 KSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ W F I V+ K E S+ HP+ ++D+QI I+ +ER
Sbjct: 328 Q---YWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 384
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 385 V---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 431
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/210 (21%), Positives = 87/210 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK +V +D ++++I H V ++ F +
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQE 277
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H ++ +SLH ++L + S D+Q +S
Sbjct: 278 LVFSASPDATIRIWSVPNASCVQVV-RAHESAVTGLSLHATGDYLLSSS-DDQYWAFSDI 335
Query: 500 ERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ ++ K +G C F PDG +G + + WD K H
Sbjct: 336 QTGRVLTKVTDETSG---CSLTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGH 391
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 392 SGPITSIAFSE-NGYYLATAADDSSVKLWD 420
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 287 RLVHTWSGHTKGVS--AIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAV 343
R++ + T G S +F P G LI G MD+++KIWD+ + + GHS +
Sbjct: 339 RVLTKVTDETSGCSLTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPI 395
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLA 401
I+F +G TA+ D ++K WD ++ F T ++ + VK D L
Sbjct: 396 TSIAFSENGYYLATAADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLAL 452
Query: 402 GMSDKKIV---QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
G +D +I QW EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 453 GGTDVQIYICKQWT----EILH-FTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFY 502
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 49/213 (23%), Positives = 89/213 (41%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
S G+ A+ P + IL+ G D V ++D +S + + T GH+K V + F
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDK-SSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 353 TKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
+AS D I+ W QV+R + + L+ D LL+ D+
Sbjct: 277 ELVFSASPDATIRIWSVPNASCVQVVRAHESAVTG--LSLHATGD---YLLSSSDDQYWA 331
Query: 410 QWDMNT-KEITQEYDQHLGAVNTIT-FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
D+ T + +T+ D+ G T F + F T + D +++W+ +
Sbjct: 332 FSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG- 390
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 211 (79.3 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 64/250 (25%), Positives = 118/250 (47%)
Query: 307 KYGH--LILSAGMDT-KVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDK 362
K+G L+L+ G++ ++KIWDV+ +GK + M H+ VRD++F DG+ L +AS DK
Sbjct: 136 KFGQDQLLLATGLNNGRIKIWDVY-TGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDK 194
Query: 363 NIKYWDT-ETGQVIRTFSTGKI-PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G +++ + Y +PD ++L + + K + WDM+ + +
Sbjct: 195 TLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDS---SVLCSVGAGKAVFLWDMDKYTLIR 251
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN 480
+ + H V F + T+S D + VW+ V+ + P + N
Sbjct: 252 KLEGHHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATVLLELGHLFPPPSPIFAGGAN 311
Query: 481 TNWLAAQSL--DNQILIYSTRER----FQLNKKKRFA-GHIVAGYACQVNFSPDGRFVMS 533
W+ + + D + + T +R + +++K A G + G C FS DG + +
Sbjct: 312 DRWVRSVAFCHDGRHIASVTDDRLVRFWSIDEKSPQAIGPLTNGLCCA--FSTDGSVLSA 369
Query: 534 GDGEGKCWFW 543
G +G FW
Sbjct: 370 GSRDGSVHFW 379
Score = 135 (52.6 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 49/188 (26%), Positives = 82/188 (43%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
Y K L++ HT V + F P +++SA D +++WD+ + G ++ GH
Sbjct: 159 YTGKLLLNLMD-HTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQNW 217
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV--KLNPDDDKQNILL 400
V +F D + + K + WD + +IR G VV + +PD LL
Sbjct: 218 VYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTLIRKLE-GHHNDVVCCEFSPD----GALL 272
Query: 401 AGMS-DKKIVQWDMNTKEITQEYDQHL----------GA----VNTITFVDNNRRFVTSS 445
A S D +++ WD +T + E HL GA V ++ F + R + +
Sbjct: 273 ATASYDTRVIVWDPHTATVLLELG-HLFPPPSPIFAGGANDRWVRSVAFCHDGRHIASVT 331
Query: 446 DDKSLRVW 453
DD+ +R W
Sbjct: 332 DDRLVRFW 339
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 213 (80.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GHTK V+++ F P L+ SA D ++IW V N+ C++ H AV
Sbjct: 263 EQILATLKGHTKKVTSVVFHPSQ-ELVFSASPDATIRIWSVPNAS-CVQVVRAHESAVTG 320
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ + +G + +PD I G
Sbjct: 321 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG---LIFGTG 377
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 378 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 437
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 438 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGLTTGV 490
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 491 AFGHHAKFIAS 501
Score = 164 (62.8 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 60/232 (25%), Positives = 100/232 (43%)
Query: 335 TYMG-HSKAVRDI---SFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 387
+++G HS ++ I C D K LT DKN+ +D + Q++ T T K+ VV
Sbjct: 221 SHVGLHSASIPGILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVV 280
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
+P Q ++ + D I W + Q H AV ++ ++SSDD
Sbjct: 281 -FHPS---QELVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDD 336
Query: 448 KSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ W F I V+ K E S+ HP+ ++D+QI I+ +ER
Sbjct: 337 Q---YWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 393
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 394 V---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 440
Score = 139 (54.0 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 46/210 (21%), Positives = 87/210 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK +V +D ++++I H V ++ F +
Sbjct: 227 SASIPGILALDLCPADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQE 286
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H ++ +SLH ++L + S D+Q +S
Sbjct: 287 LVFSASPDATIRIWSVPNASCVQVV-RAHESAVTGLSLHATGDYLLSSS-DDQYWAFSDI 344
Query: 500 ERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ ++ K +G C F PDG +G + + WD K H
Sbjct: 345 QTGRVLTKVTDETSG---CSLTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGH 400
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 401 SGPITSIAFSE-NGYYLATAADDSSVKLWD 429
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 287 RLVHTWSGHTKGVS--AIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAV 343
R++ + T G S +F P G LI G MD+++KIWD+ + + GHS +
Sbjct: 348 RVLTKVTDETSGCSLTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPI 404
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLA 401
I+F +G TA+ D ++K WD ++ F T ++ + VK D L
Sbjct: 405 TSIAFSENGYYLATAADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLAL 461
Query: 402 GMSDKKIV---QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
G +D +I QW EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 462 GGTDVQIYICKQWT----EILH-FTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFY 511
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 49/213 (23%), Positives = 89/213 (41%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
S G+ A+ P + IL+ G D V ++D +S + + T GH+K V + F
Sbjct: 227 SASIPGILALDLCPADTNKILTGGADKNVVVFDK-SSEQILATLKGHTKKVTSVVFHPSQ 285
Query: 353 TKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
+AS D I+ W QV+R + + L+ D LL+ D+
Sbjct: 286 ELVFSASPDATIRIWSVPNASCVQVVRAHESAVTG--LSLHATGD---YLLSSSDDQYWA 340
Query: 410 QWDMNT-KEITQEYDQHLGAVNTIT-FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
D+ T + +T+ D+ G T F + F T + D +++W+ +
Sbjct: 341 FSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG- 399
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 400 HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 432
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 214 (80.4 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 58/243 (23%), Positives = 111/243 (45%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V + RF P L LS DT ++ WD+ + + Y GH+ V D+
Sbjct: 337 GHCGPVYSTRFLPDSSAL-LSCSEDTSIRYWDLESFTNTV-LYQGHAYPVWDLDISPHSL 394
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQW 411
F +ASYD + W + +R ++ G + V VK +P+ N L G +DK + W
Sbjct: 395 FFASASYDHTARLWSFDRTYPLRIYA-GHLAGVDCVKFHPNS---NYLATGSTDKTVRLW 450
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+ + H G V + F N + V++ +D+ L++W+ + K + H
Sbjct: 451 SAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL-HGHTDD 509
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFV 531
+ S++ +++ +A+ S+DN + I+ + + + ++ Y Q++ + +F
Sbjct: 510 ITSVTFSLDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQF- 568
Query: 532 MSG 534
M+G
Sbjct: 569 MAG 571
Score = 187 (70.9 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 52/203 (25%), Positives = 92/203 (45%)
Query: 385 YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
Y + PD + LL+ D I WD+ + T Y H V + ++ F ++
Sbjct: 343 YSTRFLPDS---SALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASA 399
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
S D + R+W F ++ I H+ + + HPN+N+LA S D + ++S + Q
Sbjct: 400 SYDHTARLWSFDRTYPLR-IYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QG 455
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
N + F GH C + FSP+G++++S + WD S +++ L H
Sbjct: 456 NSVRLFTGHC-GPVRC-LAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSV 513
Query: 565 EWHPLEQSKVATCGWDGLIKYWD 587
+ L+ S +A+ D ++ WD
Sbjct: 514 TFS-LDSSVIASASMDNSVRIWD 535
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 37/137 (27%), Positives = 63/137 (45%)
Query: 280 DHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGH 339
D Y P R+ ++GH GV ++F P +L + D V++W G +R + GH
Sbjct: 411 DRTY-PLRI---YAGHLAGVDCVKFHPNSNYLA-TGSTDKTVRLWSA-QQGNSVRLFTGH 464
Query: 340 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 399
VR ++F +G ++A D+ +K WD +G + + G + + D I
Sbjct: 465 CGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLH-GHTDDITSVTFSLDSSVIA 523
Query: 400 LAGMSDKKIVQWDMNTK 416
A M D + WD+ +K
Sbjct: 524 SASM-DNSVRIWDIKSK 539
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 50/215 (23%), Positives = 81/215 (37%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 393
+ +GH V F D + L+ S D +I+YWD E+ + P V L D
Sbjct: 333 KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYP-VWDL--DI 389
Query: 394 DKQNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV 452
++ A S D W + + Y HL V+ + F N+ T S DK++R+
Sbjct: 390 SPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRL 449
Query: 453 WEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
W ++ + H + ++ PN +L + D + ++ K G
Sbjct: 450 WSAQQGNSVRLFTG-HCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASG---TLYKDLHG 505
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
H V FS D + S + WD KS
Sbjct: 506 H--TDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 212 (79.7 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 64/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GHTK V+++ F P L+ SA D ++IW V N+ C++ H AV
Sbjct: 254 EQILATLKGHTKKVTSVVFHPSQD-LVFSASPDATIRIWSVPNAS-CVQVVRAHESAVTG 311
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS---TGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ + +G + +PD I G
Sbjct: 312 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG---LIFGTG 368
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 369 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 428
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 429 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGLTTGV 481
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 482 AFGHHAKFIAS 492
Score = 168 (64.2 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 60/232 (25%), Positives = 101/232 (43%)
Query: 335 TYMG-HSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVV 387
+++G HS ++ I C +D K LT DKN+ +D + Q++ T T K+ VV
Sbjct: 212 SHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVV 271
Query: 388 KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDD 447
+P D ++ + D I W + Q H AV ++ ++SSDD
Sbjct: 272 -FHPSQD---LVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDD 327
Query: 448 KSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ W F I V+ K E S+ HP+ ++D+QI I+ +ER
Sbjct: 328 Q---YWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTN 384
Query: 504 LNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 385 V---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 431
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 46/210 (21%), Positives = 87/210 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK +V +D ++++I H V ++ F +
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQD 277
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H ++ +SLH ++L + S D+Q +S
Sbjct: 278 LVFSASPDATIRIWSVPNASCVQVV-RAHESAVTGLSLHATGDYLLSSS-DDQYWAFSDI 335
Query: 500 ERFQLNKK--KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
+ ++ K +G C F PDG +G + + WD K H
Sbjct: 336 QTGRVLTKVTDETSG---CSLTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGH 391
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
G + +AT D +K WD
Sbjct: 392 SGPITSIAFSE-NGYYLATAADDSSVKLWD 420
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 287 RLVHTWSGHTKGVS--AIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAV 343
R++ + T G S +F P G LI G MD+++KIWD+ + + GHS +
Sbjct: 339 RVLTKVTDETSGCSLTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPI 395
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLA 401
I+F +G TA+ D ++K WD ++ F T ++ + VK D L
Sbjct: 396 TSIAFSENGYYLATAADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLAL 452
Query: 402 GMSDKKIV---QWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
G +D +I QW EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 453 GGTDVQIYICKQWT----EILH-FTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFY 502
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 49/213 (23%), Positives = 89/213 (41%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
S G+ A+ P + IL+ G D V ++D +S + + T GH+K V + F
Sbjct: 218 SASIPGILALDLCPSDTNKILTGGADKNVVVFDK-SSEQILATLKGHTKKVTSVVFHPSQ 276
Query: 353 TKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIV 409
+AS D I+ W QV+R + + L+ D LL+ D+
Sbjct: 277 DLVFSASPDATIRIWSVPNASCVQVVRAHESAVTG--LSLHATGD---YLLSSSDDQYWA 331
Query: 410 QWDMNT-KEITQEYDQHLGAVNTIT-FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 467
D+ T + +T+ D+ G T F + F T + D +++W+ +
Sbjct: 332 FSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPG- 390
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 391 HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 423
>UNIPROTKB|Q9W7K9 [details] [associations]
symbol:SWiP-1 "SOCS box-containing WD protein SWiP-1"
species:9031 "Gallus gallus" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 CTD:26118
HOGENOM:HOG000063727 HOVERGEN:HBG034543 KO:K10341 OMA:GHHNDVV
EMBL:AADN02025704 EMBL:AF072879 IPI:IPI00570763 RefSeq:NP_990203.1
UniGene:Gga.3758 STRING:Q9W7K9 Ensembl:ENSGALT00000009090
GeneID:395685 KEGG:gga:395685 InParanoid:Q9W7K9 NextBio:20815757
Uniprot:Q9W7K9
Length = 421
Score = 210 (79.0 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 66/250 (26%), Positives = 120/250 (48%)
Query: 307 KYGH--LILSAGMDT-KVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDK 362
K+G L+L+ G++ ++KIWDV+ +GK + M H++ VRD++F DG+ L +AS DK
Sbjct: 135 KFGQDQLLLATGLNNGRIKIWDVY-TGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDK 193
Query: 363 NIKYWDT-ETGQVIRTFSTGKI-PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G +++ + Y +PD +IL + + K + WDM+ + +
Sbjct: 194 TLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDS---SILCSVGASKAVFLWDMDKYSMIR 250
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN 480
+ + H V F + T+S D + VW+ I V+++ P + N
Sbjct: 251 KLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGAN 310
Query: 481 TNWLAAQSLDNQIL-IYSTRE----RF-QLNKKKRF-AGHIVAGYACQVNFSPDGRFVMS 533
W+ + S + L I S + RF +++++ + G C FS DG + +
Sbjct: 311 DRWVRSVSFSHDGLHIASLADDKMVRFWRIDEEYPVQVAPLNNGLCC--TFSTDGSVLAA 368
Query: 534 GDGEGKCWFW 543
G +G FW
Sbjct: 369 GTQDGSVHFW 378
Score = 137 (53.3 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 48/187 (25%), Positives = 80/187 (42%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
Y K L++ HT+ V + F P +++SA D +++WD+ + G M+ GH
Sbjct: 158 YTGKLLLNLMD-HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNW 216
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV-KLNPDDDKQNILLA 401
V +F D + + K + WD + +IR V + +PD LLA
Sbjct: 217 VYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPD----GALLA 272
Query: 402 GMS-DKKIVQWDMNTKEITQEYDQHL----------GA----VNTITFVDNNRRFVTSSD 446
S D ++ WD I +E+ HL GA V +++F + + +D
Sbjct: 273 TASYDTRVYVWDPYIGVILREFG-HLFPPPTPIFAGGANDRWVRSVSFSHDGLHIASLAD 331
Query: 447 DKSLRVW 453
DK +R W
Sbjct: 332 DKMVRFW 338
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 212 (79.7 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 80/299 (26%), Positives = 123/299 (41%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P +L SGH V I P ++ D +KIWD+ SGK + GH VR
Sbjct: 192 PWKLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLA-SGKLKLSLTGHISTVR 249
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAG 402
+ + DK +K WD E +VIR + G + Y + L+P D +L+
Sbjct: 250 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGLDLHPTLD---VLVTC 305
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D WD+ TK H AV T+ + +T S D ++R+W+ + +
Sbjct: 306 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL-VAGKTR 364
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
H S+ ++ LHP A+ S DN I + + + + +GH V
Sbjct: 365 VTLTNHKKSVRAVVLHPLLYTFASGSPDN-IKQWKFPDGGFI---QNLSGHNAIINTLAV 420
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE-QSKVATCGWD 580
N DG V SG G WDW++ F+ + H V G L+ +S + C +D
Sbjct: 421 N--ADGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS----LDSESGIFACAFD 470
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 212 (79.7 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 80/299 (26%), Positives = 123/299 (41%)
Query: 285 PKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVR 344
P +L SGH V I P ++ D +KIWD+ SGK + GH VR
Sbjct: 193 PWKLYRVISGHLGWVRCIAVEPG-NQWFVTGSADRTIKIWDLA-SGKLKLSLTGHISTVR 250
Query: 345 DISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAG 402
+ + DK +K WD E +VIR + G + Y + L+P D +L+
Sbjct: 251 GVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLSAVYGLDLHPTID---VLVTC 306
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D WD+ TK H AV T+ + +T S D ++R+W+ + +
Sbjct: 307 SRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDL-VAGKTR 365
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
H S+ ++ LHP A+ S DN I + + + + +GH V
Sbjct: 366 VTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFI---QNLSGHNAIINTLAV 421
Query: 523 NFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE-QSKVATCGWD 580
N DG V SG G WDW++ F+ + H V G L+ +S + C +D
Sbjct: 422 N--TDGVLV-SGADNGTMHLWDWRTGYNFQ--RVHAAVQPGS----LDSESGIFACAFD 471
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 150 (57.9 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 47/156 (30%), Positives = 76/156 (48%)
Query: 264 QGRSWVAPPKDAKAANDHCY--IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKV 321
+ RS + KD + +++ + K +H GH + V++I F G LI+S G D V
Sbjct: 16 ENRSGINKLKDEFSKSNYAIETLEKTELH---GHNECVNSINFNDD-GSLIVSGGDDETV 71
Query: 322 KIWDVFNSGKCMRTYMGHSKAVRDISFCN-DGTKFLTASYDKNIKYWDTETGQVIRTFST 380
+IWDV KC+ T GHS V +F N D K ++ D +I+Y+D E + T
Sbjct: 72 RIWDV-GKRKCLTTLYGHSTNVFATNFLNNDNRKVISGGNDADIRYYDIENQKC--TVYK 128
Query: 381 GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 416
V+KL+ + + L+ SD + +D+ K
Sbjct: 129 HHSKKVLKLSVCPTQPQVFLSSSSDGSVRLFDVRLK 164
Score = 117 (46.2 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 507 KKRFAGHIVAGYACQVNF-SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCE 565
K+ ++GH+ VNF P+ +++SG + K + WD +S K+ R L+ H+
Sbjct: 770 KQVYSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVV 829
Query: 566 WHPLEQSKVATCGWDGLIKYWD 587
HP E +AT G D I W+
Sbjct: 830 CHPNEPC-IATSGIDPYICLWE 850
Score = 106 (42.4 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 50/205 (24%), Positives = 85/205 (41%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++ + T GH+ V A F ++S G D ++ +D+ N KC Y HSK V
Sbjct: 79 RKCLTTLYGHSTNVFATNFLNNDNRKVISGGNDADIRYYDIENQ-KCT-VYKHHSKKVLK 136
Query: 346 ISFCNDGTK-FLTAS-------YDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 397
+S C + FL++S +D +KY DTE Q I+T + Y L P
Sbjct: 137 LSVCPTQPQVFLSSSSDGSVRLFDVRLKYKDTEI-QPIQTAPSNNDGYRAIL-PQ----- 189
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
++ G + ++ T D ++ T T T+ ++ ++ +G
Sbjct: 190 VIGGGRGRTMALPLQQQLQQSTSTTDSPSSSITTSTTTTTTTTNKTTLNENPIK---YGN 246
Query: 458 PVVIKYISEPHMHSMP-SISLHPNT 481
++I + P S SIS+ P T
Sbjct: 247 SLLINFDPLPLRRSFRYSISI-PKT 270
Score = 103 (41.3 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 28/118 (23%), Positives = 59/118 (50%)
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 397
GH++ V I+F +DG+ ++ D+ ++ WD + + T G V N ++
Sbjct: 45 GHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLY-GHSTNVFATNFLNNDNR 103
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRR-FVTSSDDKSLRVWE 454
+++G +D I +D+ ++ T Y H V ++ + F++SS D S+R+++
Sbjct: 104 KVISGGNDADIRYYDIENQKCTV-YKHHSKKVLKLSVCPTQPQVFLSSSSDGSVRLFD 160
Score = 99 (39.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 416 KEITQEYDQHLG--AVNTITFVDNNRRFVTS-SDDKSLRVWEFGIPVVIKYISEPHMHSM 472
K Q Y H+ + ++ F N ++ S SDD L +W+ +++ I E H +
Sbjct: 767 KTFKQVYSGHVSEQTIKSVNFYGPNSEYIVSGSDDSKLFIWDKESAKIVR-ILEGHDSHV 825
Query: 473 PSISLHPNTNWLAAQSLDNQILIYS-TRE---RFQLNKKKRFAGH 513
S+ HPN +A +D I ++ T+E ++ ++K+ H
Sbjct: 826 NSVVCHPNEPCIATSGIDPYICLWEPTKEYPDETEMQRRKKTINH 870
Score = 74 (31.1 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 456
+ T E T E H VN+I F D+ V+ DD+++R+W+ G
Sbjct: 35 IETLEKT-ELHGHNECVNSINFNDDGSLIVSGGDDETVRIWDVG 77
Score = 72 (30.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 399 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
+++G D K+ WD + +I + + H VN++ N TS D + +WE
Sbjct: 795 IVSGSDDSKLFIWDKESAKIVRILEGHDSHVNSVVCHPNEPCIATSGIDPYICLWE 850
Score = 42 (19.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 565 EWHPLEQSKVATCGWDGLIKYWD 587
E+HP + T DG ++ +D
Sbjct: 276 EYHPFDGYSFITASSDGTVRLFD 298
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 190 (71.9 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 41/121 (33%), Positives = 67/121 (55%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F DG +A+ D +K WD G+++ F TG + VV+ +P++ +L +G S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE---YLLASGSS 209
Query: 405 D 405
D
Sbjct: 210 D 210
Score = 188 (71.2 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 49/199 (24%), Positives = 87/199 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 191
Query: 474 S--ISLHPNTNWLAAQSLD 490
+ HPN LA+ S D
Sbjct: 192 VNVVEFHPNEYLLASGSSD 210
Score = 151 (58.2 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
C + FSPDG+++ S + WD + K+ H G E+HP E
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 225 (84.3 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 63/252 (25%), Positives = 120/252 (47%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH ++ + + P G +++ D K+KIWDV SG C+ T+ H+ AV + F G
Sbjct: 337 GHFDSMNTLCYSPD-GSRLVTGSDDGKIKIWDV-RSGFCLMTFTEHTSAVTQVQFAKRGQ 394
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFS-TGKIPY-VVKLNPDDDKQNILLAGMSDK-KIVQ 410
++S D I+ WD + +TF+ T ++ + + ++P + +++ G D +I
Sbjct: 395 VLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAVDPSGE---VIVGGSQDTFEIYV 451
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE-FGIPVVIKYISEPHM 469
W + T ++ H G ++ +TF N ++S DK++R+W F ++ I E
Sbjct: 452 WSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWNIFSRNQTVEPI-EIQS 510
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN--FSPD 527
++ +++ P+ LA +LD + I+ + QL H++ G VN + D
Sbjct: 511 DAL-CLTMRPDCKELAVSTLDGHVTIFDIEDAKQL--------HLIDGRKDIVNGRYLED 561
Query: 528 GRFVMSGDGEGK 539
+F+ GK
Sbjct: 562 -KFIAKNSNRGK 572
Score = 150 (57.9 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 50/238 (21%), Positives = 100/238 (42%)
Query: 353 TKFLTASYDKN-IKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSDKKIVQ 410
+K L + + ++ E +I++ S G+ V +N + A + + +
Sbjct: 266 SKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTGEWLAFGSAKLGQLLVYE 325
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W + + Q+ H ++NT+ + + R VT SDD +++W+ + +E H
Sbjct: 326 WQSESYILKQQ--GHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTE-HTS 382
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
++ + L + SLD I + RF+ K F + C + P G
Sbjct: 383 AVTQVQFAKRGQVLFSSSLDGTIRAWDLI-RFR--NFKTFTATSRVQFNC-LAVDPSGEV 438
Query: 531 VMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
++ G + + + W ++ ++ +L HEG I C E S +A+ WD I+ W+
Sbjct: 439 IVGGSQDTFEIYVWSVQTGQLLDSLTGHEGP-ISCLTFGKENSILASASWDKTIRIWN 495
Score = 96 (38.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 39/173 (22%), Positives = 71/173 (41%)
Query: 395 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK--SLRV 452
+ +L+ G ++ + +++ + Q AVNT+ ++ ++ K L V
Sbjct: 265 QSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVN-INKTGEWLAFGSAKLGQLLV 323
Query: 453 WEF-GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
+E+ ++K + H SM ++ P+ + L S D +I I+ R F L F
Sbjct: 324 YEWQSESYILK--QQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCL---MTFT 378
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
H A QV F+ G+ + S +G WD + F+T V C
Sbjct: 379 EHTSA--VTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNC 429
Score = 81 (33.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFP--KYGHLILSAGMDTKVKIW---DVFNSGKCM---- 333
++ + ++H ++ +K V+ I+F P KY + +D +++W D+ +
Sbjct: 84 FVSRVVLHHFNFKSK-VNDIKFSPCGKY----FAIAIDRFIQVWKTPDLTEDRQFAPFVR 138
Query: 334 -RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ--VIRTFSTGKIPYVVKLN 390
R Y GH V +IS+ D F++ S D K + + + V TFS G YV+
Sbjct: 139 HRIYSGHFDEVLNISWSLDSRFFISTSKDMTAKIFSLNSDEKDVAMTFS-GHRDYVINAF 197
Query: 391 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD 423
D Q I+ D + +W+ + + D
Sbjct: 198 FSHD-QEIIYTVSKDGALFKWEYTERPKPENED 229
Score = 38 (18.4 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 14 ELDKPENQNDQNPDSA 29
E KPEN++ + D A
Sbjct: 221 ERPKPENEDSDSEDDA 236
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 225 (84.3 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 63/252 (25%), Positives = 120/252 (47%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH ++ + + P G +++ D K+KIWDV SG C+ T+ H+ AV + F G
Sbjct: 337 GHFDSMNTLCYSPD-GSRLVTGSDDGKIKIWDV-RSGFCLMTFTEHTSAVTQVQFAKRGQ 394
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFS-TGKIPY-VVKLNPDDDKQNILLAGMSDK-KIVQ 410
++S D I+ WD + +TF+ T ++ + + ++P + +++ G D +I
Sbjct: 395 VLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNCLAVDPSGE---VIVGGSQDTFEIYV 451
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE-FGIPVVIKYISEPHM 469
W + T ++ H G ++ +TF N ++S DK++R+W F ++ I E
Sbjct: 452 WSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRIWNIFSRNQTVEPI-EIQS 510
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN--FSPD 527
++ +++ P+ LA +LD + I+ + QL H++ G VN + D
Sbjct: 511 DAL-CLTMRPDCKELAVSTLDGHVTIFDIEDAKQL--------HLIDGRKDIVNGRYLED 561
Query: 528 GRFVMSGDGEGK 539
+F+ GK
Sbjct: 562 -KFIAKNSNRGK 572
Score = 150 (57.9 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 50/238 (21%), Positives = 100/238 (42%)
Query: 353 TKFLTASYDKN-IKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSDKKIVQ 410
+K L + + ++ E +I++ S G+ V +N + A + + +
Sbjct: 266 SKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVNINKTGEWLAFGSAKLGQLLVYE 325
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 470
W + + Q+ H ++NT+ + + R VT SDD +++W+ + +E H
Sbjct: 326 WQSESYILKQQ--GHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTE-HTS 382
Query: 471 SMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRF 530
++ + L + SLD I + RF+ K F + C + P G
Sbjct: 383 AVTQVQFAKRGQVLFSSSLDGTIRAWDLI-RFR--NFKTFTATSRVQFNC-LAVDPSGEV 438
Query: 531 VMSGDGEG-KCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
++ G + + + W ++ ++ +L HEG I C E S +A+ WD I+ W+
Sbjct: 439 IVGGSQDTFEIYVWSVQTGQLLDSLTGHEGP-ISCLTFGKENSILASASWDKTIRIWN 495
Score = 96 (38.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 39/173 (22%), Positives = 71/173 (41%)
Query: 395 KQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK--SLRV 452
+ +L+ G ++ + +++ + Q AVNT+ ++ ++ K L V
Sbjct: 265 QSKLLVVGFTNGEFRLYEIEDFNLIQSLSMGQNAVNTVN-INKTGEWLAFGSAKLGQLLV 323
Query: 453 WEF-GIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
+E+ ++K + H SM ++ P+ + L S D +I I+ R F L F
Sbjct: 324 YEWQSESYILK--QQGHFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCL---MTFT 378
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
H A QV F+ G+ + S +G WD + F+T V C
Sbjct: 379 EHTSA--VTQVQFAKRGQVLFSSSLDGTIRAWDLIRFRNFKTFTATSRVQFNC 429
Score = 81 (33.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 36/153 (23%), Positives = 67/153 (43%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFP--KYGHLILSAGMDTKVKIW---DVFNSGKCM---- 333
++ + ++H ++ +K V+ I+F P KY + +D +++W D+ +
Sbjct: 84 FVSRVVLHHFNFKSK-VNDIKFSPCGKY----FAIAIDRFIQVWKTPDLTEDRQFAPFVR 138
Query: 334 -RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ--VIRTFSTGKIPYVVKLN 390
R Y GH V +IS+ D F++ S D K + + + V TFS G YV+
Sbjct: 139 HRIYSGHFDEVLNISWSLDSRFFISTSKDMTAKIFSLNSDEKDVAMTFS-GHRDYVINAF 197
Query: 391 PDDDKQNILLAGMSDKKIVQWDMNTKEITQEYD 423
D Q I+ D + +W+ + + D
Sbjct: 198 FSHD-QEIIYTVSKDGALFKWEYTERPKPENED 229
Score = 38 (18.4 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 14 ELDKPENQNDQNPDSA 29
E KPEN++ + D A
Sbjct: 221 ERPKPENEDSDSEDDA 236
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 217 (81.4 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 77/286 (26%), Positives = 116/286 (40%)
Query: 265 GRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW 324
G + P K + P +L SGH V +I P ++ D +KIW
Sbjct: 177 GTRTLVPRKAPTMPKPQWHPPWKLYRVISGHLGWVRSIAVEPG-NQWFVTGSADRTIKIW 235
Query: 325 DVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP 384
D+ SGK + GH VR ++ N + DK +K WD E +VIR + G +
Sbjct: 236 DLA-SGKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYH-GHLS 293
Query: 385 --YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFV 442
Y + L+P D +L+ D WD+ TK H V T+ + V
Sbjct: 294 AVYDLDLHPTID---VLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVV 350
Query: 443 T-SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRER 501
T S D ++R+W+ + + H S+ ++ LHP A+ S DN I + +
Sbjct: 351 TVGSHDTTIRLWDL-VAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDN-IKQWKFPDG 408
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
N + +GH VN DG V SG G WDW++
Sbjct: 409 ---NFIQNLSGHNAIINTLAVN--SDGVLV-SGADNGTIHMWDWRT 448
Score = 149 (57.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 48/178 (26%), Positives = 78/178 (43%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K VHT SGHT V+ ++ ++ DT +++WD+ +GK T H K+VR
Sbjct: 324 KANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLV-AGKTRATLTNHKKSVRA 382
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
+ F + S D NIK W G I+ S G + L + D +L++G +
Sbjct: 383 LVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLS-GHNAIINTLAVNSD--GVLVSGADN 438
Query: 406 KKIVQWDMNTKEITQEY---------DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
I WD T Q D G + + F + R +T+ DK+++V++
Sbjct: 439 GTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCV-FDQSESRLITAEADKTIKVYK 495
Score = 38 (18.4 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 48 VDDTTLALTVAQARQTQSR 66
V LAL +QARQ SR
Sbjct: 128 VHSMALALPPSQARQEASR 146
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 204 (76.9 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 78/308 (25%), Positives = 126/308 (40%)
Query: 291 TWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIW----DVFNSGKCMRTYMGHSKAVRDI 346
T GH+ V+ I P++ +ILSA D + +W D N G R GHS V D+
Sbjct: 10 TLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
+DG L+ S+D ++ WD TG R F G V+ + D + I+ +G DK
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSADNRQIV-SGSRDK 127
Query: 407 KIVQWD-MNTKEITQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEFGIPVVIKY 463
I W+ + + T + D H V+ + F N N V+ DK ++VW +K
Sbjct: 128 TIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA-NCKLKT 186
Query: 464 ISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
H + ++++ P+ + A+ D Q +++ E L G + N
Sbjct: 187 NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDTINALCFSPN 244
Query: 524 ----FSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGW 579
+ G + D EGK + + + K C W Q+ A G+
Sbjct: 245 RYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFA--GY 302
Query: 580 -DGLIKYW 586
D LI+ W
Sbjct: 303 TDNLIRVW 310
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 212 (79.7 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 72/296 (24%), Positives = 134/296 (45%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC--MRTYMGHSK 341
+P + + H V+A++F P L+ + GMD +VK+W+VF KC + G +
Sbjct: 326 VPTTAMSVFDAHDGEVNAVQFSPG-SRLLATGGMDRRVKLWEVFGD-KCEFKGSLSGSNA 383
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNIL 399
+ I F + G+ L AS D + W + ++ T + +GK+ K D+ + +
Sbjct: 384 GITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKV-LSAKFLLDNAR---I 439
Query: 400 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
++G D+ + WD+ +K + + N I V + ++ DK +R W+
Sbjct: 440 VSGSHDRTLKLWDLRSKVCIKTVFAG-SSCNDI--VCTEQCVMSGHFDKKIRFWDIRSES 496
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHIVAGY 518
+++ + + + ++ L+P L + S D+ + I R +N ++ F+ G+
Sbjct: 497 IVREMEL--LGKITALDLNPERTELLSCSRDDLLKIIDLR----INAVRQTFSA---PGF 547
Query: 519 AC-----QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHP 568
C + FSPDG +V +G EG + W+ S KV + L H I W P
Sbjct: 548 KCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSP 603
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 61/255 (23%), Positives = 109/255 (42%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SG G+++I F G +L+A D +IW V + + T GHS V F D
Sbjct: 379 SGSNAGITSIEF-DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSAKFLLDN 436
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ ++ S+D+ +K WD + I+T G N + +++G DKKI WD
Sbjct: 437 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGS-----SCNDIVCTEQCVMSGHFDKKIRFWD 491
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH-- 470
+ ++ I +E + LG + + ++ S D L++ + I V + S P
Sbjct: 492 IRSESIVREMEL-LGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCG 550
Query: 471 -SMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSPDG 528
P+ +++AA + + + I++ + + K + I A V +SP G
Sbjct: 551 SDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINA-----VAWSPAG 605
Query: 529 RFVMSGDGEGKCWFW 543
V++ D K W
Sbjct: 606 SHVVTVDKGSKAVLW 620
Score = 143 (55.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 51/217 (23%), Positives = 99/217 (45%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
RL HT +GH+ V + +F ++ S D +K+WD+ S C++T S DI
Sbjct: 415 RLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWDL-RSKVCIKTVFAGSSC-NDI 471
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSD 405
C + ++ +DK I++WD + ++R GKI + LNP+ + +L D
Sbjct: 472 -VCTEQC-VMSGHFDKKIRFWDIRSESIVREMELLGKIT-ALDLNPE--RTELLSCSRDD 526
Query: 406 K-KIVQWDMNTKEITQEYDQ---HLGAVNTITFVDNNRRFVTS-SDDKSLRVWEFGIPVV 460
KI+ D+ + Q + G+ T + +V + + + SL +W V
Sbjct: 527 LLKII--DLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKV 584
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 497
K +S+ H S+ +++ P + + ++ +++S
Sbjct: 585 EKVLSKHHSSSINAVAWSPAGSHVVTVDKGSKAVLWS 621
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 210 (79.0 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 68/251 (27%), Positives = 115/251 (45%)
Query: 339 HSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNI 398
+SK V + + +DG K ++ D IK WD Q ++T G V+ L DD +
Sbjct: 209 NSKGVYCLQY-DDG-KIVSGLRDNTIKIWDRTDLQCVKTLM-GHTGSVLCLQYDD---KV 262
Query: 399 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP 458
+++G SD + WD+NT E+ H AV + F NN VT S D+S+ VW+ P
Sbjct: 263 IISGSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMTSP 320
Query: 459 --VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVA 516
+ ++ + H ++ + + ++ + S D I ++ST + GH
Sbjct: 321 SEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTST---CEFVRTLNGH-KR 374
Query: 517 GYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVAT 576
G AC + + R V+SG + WD + R L+ HE + + C + ++ +
Sbjct: 375 GIAC-LQYRD--RLVVSGSSDNSIRLWDIECGACLRVLEGHEEL-VRCI--RFDTKRIVS 428
Query: 577 CGWDGLIKYWD 587
+DG IK WD
Sbjct: 429 GAYDGKIKVWD 439
Score = 187 (70.9 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 53/208 (25%), Positives = 101/208 (48%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V T GHT V +++ K +I+S D+ V++WDV N+G+ + T + H +AV + F
Sbjct: 243 VKTLMGHTGSVLCLQYDDK---VIISGSSDSTVRVWDV-NTGEMVNTLIHHCEAVLHLRF 298
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
N+G +T S D++I WD + I T + + +N D + +++ D+ I
Sbjct: 299 -NNGM-MVTCSKDRSIAVWDMTSPSEI-TLRRVLVGHRAAVNVVDFDEKYIVSASGDRTI 355
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
W +T E + + H + + + D R V+ S D S+R+W+ ++ + E H
Sbjct: 356 KVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNSIRLWDIECGACLRVL-EGH 412
Query: 469 MHSMPSISLHPNTNWLAAQSLDNQILIY 496
+ I +T + + + D +I ++
Sbjct: 413 EELVRCIRF--DTKRIVSGAYDGKIKVW 438
Score = 138 (53.6 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V T +GH +G++ +++ + L++S D +++WD+ G C+R GH + VR I F
Sbjct: 366 VRTLNGHKRGIACLQYRDR---LVVSGSSDNSIRLWDI-ECGACLRVLEGHEELVRCIRF 421
Query: 349 CNDGTKFLTASYDKNIKYWD 368
D + ++ +YD IK WD
Sbjct: 422 --DTKRIVSGAYDGKIKVWD 439
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/172 (26%), Positives = 82/172 (47%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V+ + F KY I+SA D +K+W ++ + +RT GH + + + + D
Sbjct: 331 GHRAAVNVVDFDEKY---IVSASGDRTIKVWST-STCEFVRTLNGHKRGIACLQY-RDRL 385
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 413
++ S D +I+ WD E G +R + +V+ D K+ +++G D KI WD+
Sbjct: 386 -VVSGSSDNSIRLWDIECGACLRVLEGHE--ELVRCIRFDTKR--IVSGAYDGKIKVWDL 440
Query: 414 ----------NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF 455
NT + + H G V + F + + V+SS D ++ +W+F
Sbjct: 441 VAALDPRAASNTLCLNTLVE-HTGRVFRLQF--DEFQIVSSSHDDTILIWDF 489
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 204 (76.9 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 62/273 (22%), Positives = 115/273 (42%)
Query: 312 ILSAGMDTKVKIWDVF--NSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
+++ G+D VK+WD+ N+ K GH+ V ++ +DG ++S D + WD
Sbjct: 55 LVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDA 114
Query: 370 ETGQVIRTFSTGKIP-YVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
+G S G + + V+ +P + +++G++D KI + + T + Q D G
Sbjct: 115 RSGDKKHLLSFGPVDLWTVQFSPCN---KYVISGLNDGKISMYSVETGKAEQTLDAQNGK 171
Query: 429 VN-TITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQ 487
+I + + + + + D + +++ V++ + E H + S+ PN+ L
Sbjct: 172 YTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTL-EGHAMPVRSLCFSPNSQLLLTA 230
Query: 488 SLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
S D + +Y + +GH A + V FS DG+ S + WD
Sbjct: 231 SDDGHMKLYDVTHSDVVGT---LSGH--ASWVLCVAFSEDGKHFASSSSDNSVKIWDTSE 285
Query: 548 CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
K T H G + P KVA+ D
Sbjct: 286 RKCLHTFAEHTDQVWGVRYSP-GNDKVASASED 317
Score = 163 (62.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 42/153 (27%), Positives = 78/153 (50%)
Query: 301 AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASY 360
+I + P G I S +D + I+DV +GK ++T GH+ VR + F + LTAS
Sbjct: 175 SIAYSPD-GKYIASGAIDGIITIFDVA-AGKVVQTLEGHAMPVRSLCFSPNSQLLLTASD 232
Query: 361 DKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
D ++K +D V+ T S G +V+ + +D ++ + SD + WD + ++
Sbjct: 233 DGHMKLYDVTHSDVVGTLS-GHASWVLCVAFSEDGKHFA-SSSSDNSVKIWDTSERKCLH 290
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
+ +H V + + N + ++S+DKSL ++
Sbjct: 291 TFAEHTDQVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 155 (59.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 61/251 (24%), Positives = 108/251 (43%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA-VRD 345
+L H GH GV ++ G I S+ +D+ + +WD + K G
Sbjct: 76 KLRHKLKGHALGVVSVAVSSD-GQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQ 134
Query: 346 ISFCNDGTKFLTASY-DKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDKQNILLAG 402
S CN K++ + D I + ETG+ +T GK + +PD + +G
Sbjct: 135 FSPCN---KYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDG---KYIASG 188
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D I +D+ ++ Q + H V ++ F N++ +T+SDD +++++ V+
Sbjct: 189 AIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVG 248
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+S H + ++ + A+ S DN + I+ T ER L+ FA H + V
Sbjct: 249 TLSG-HASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHT---FAEHTDQVWG--V 302
Query: 523 NFSPDGRFVMS 533
+SP V S
Sbjct: 303 RYSPGNDKVAS 313
Score = 143 (55.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 46/198 (23%), Positives = 89/198 (44%)
Query: 302 IRFFP--KYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS-KAVRDISFCNDGTKFLTA 358
++F P KY ++S D K+ ++ V +GK +T + K I++ DG +
Sbjct: 133 VQFSPCNKY---VISGLNDGKISMYSV-ETGKAEQTLDAQNGKYTLSIAYSPDGKYIASG 188
Query: 359 SYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI 418
+ D I +D G+V++T +P V L + Q +LL D + +D+ ++
Sbjct: 189 AIDGIITIFDVAAGKVVQTLEGHAMP-VRSLCFSPNSQ-LLLTASDDGHMKLYDVTHSDV 246
Query: 419 TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLH 478
H V + F ++ + F +SS D S+++W+ + +E H + +
Sbjct: 247 VGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAE-HTDQVWGVRYS 305
Query: 479 PNTNWLAAQSLDNQILIY 496
P + +A+ S D + IY
Sbjct: 306 PGNDKVASASEDKSLNIY 323
Score = 60 (26.2 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 30/118 (25%), Positives = 47/118 (39%)
Query: 37 HILPSKSAAPQVDDTTLALTVAQARQT--QSRPIDPSQHVVAYNPTYEQLWAPIYGPAHP 94
H L S A D T+A + + +R D +H++++ P LW + P +
Sbjct: 84 HALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGD-KKHLLSFGPV--DLWTVQFSPCNK 140
Query: 95 YAKDGIAQGMRNHKLGFVEDASIDSFVFDEQYNTFYKYGYAADPAGSNYI--GDLDAL 150
Y G+ G + + VE + D Q N Y A P G YI G +D +
Sbjct: 141 YVISGLNDGKIS--MYSVETGKAEQ-TLDAQ-NGKYTLSIAYSPDGK-YIASGAIDGI 193
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 219 (82.2 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 54/211 (25%), Positives = 94/211 (44%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+HT GHT V + K ++S D +++WD+ +G+C+ MGH AVR + +
Sbjct: 507 IHTLYGHTSTVRCMHLHEKR---VVSGSRDATLRVWDI-ETGQCLHVLMGHVAAVRCVQY 562
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
DG + ++ +YD +K WD ET + T G V L D +++G D I
Sbjct: 563 --DGRRVVSGAYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQFDGIH---VVSGSLDTSI 616
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPH 468
WD+ T H + + DN V+ + D ++++W+ ++ + PH
Sbjct: 617 RVWDVETGNCIHTLTGHQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQTLQGPH 674
Query: 469 MHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
H L N N++ S D + ++ R
Sbjct: 675 KHQSAVTCLQFNKNFVITSSDDGTVKLWDLR 705
Score = 192 (72.6 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWD 368
G+ I+S D +K+W +GKC+RT +GH+ V S D ++ S D+ +K W+
Sbjct: 444 GNRIVSGSDDNTLKVWSAV-TGKCLRTLVGHTGGVWS-SQMRDNI-IISGSTDRTLKVWN 500
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
ETG+ I T G V ++ + + +++G D + WD+ T + H+ A
Sbjct: 501 AETGECIHTLY-GHTSTVRCMHLHEKR---VVSGSRDATLRVWDIETGQCLHVLMGHVAA 556
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + + + RR V+ + D ++VW+ P + H+ SL + + + S
Sbjct: 557 VRCVQY--DGRRVVSGAYDFMVKVWD---PETETCLHTLQGHTNRVYSLQFDGIHVVSGS 611
Query: 489 LDNQILIYSTRERFQLNKKKRFAGH--IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 546
LD I ++ N GH + +G + N ++SG+ + WD K
Sbjct: 612 LDTSIRVWDVETG---NCIHTLTGHQSLTSGMELKDNI------LVSGNADSTVKIWDIK 662
Query: 547 SCKVFRTLKC---HEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ + +TL+ H+ + C ++ V T DG +K WD
Sbjct: 663 TGQCLQTLQGPHKHQSA-VTCL--QFNKNFVITSSDDGTVKLWD 703
Score = 167 (63.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 61/258 (23%), Positives = 109/258 (42%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
++I+S D +K+W+ +G+C+ T GH+ VR + + ++ S D ++ WD
Sbjct: 485 NIIISGSTDRTLKVWNA-ETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDI 541
Query: 370 ETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAV 429
ETGQ + G + V + D + +++G D + WD T+ H V
Sbjct: 542 ETGQCLHVLM-GHVAAVRCVQYDGRR---VVSGAYDFMVKVWDPETETCLHTLQGHTNRV 597
Query: 430 NTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSL 489
++ F + V+ S D S+RVW+ I ++ H + L N L + +
Sbjct: 598 YSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGMELKDNI--LVSGNA 652
Query: 490 DNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCK 549
D+ + I+ + L + H A Q N + FV++ +G WD ++ +
Sbjct: 653 DSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKN----FVITSSDDGTVKLWDLRTGE 708
Query: 550 VFRTLKCHE-GVCIGCEW 566
R L E G G W
Sbjct: 709 FIRNLVTLESGGSGGVVW 726
Score = 133 (51.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 31/95 (32%), Positives = 50/95 (52%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMG---HSKAVRD 345
+HT +GH S + ++++S D+ VKIWD+ +G+C++T G H AV
Sbjct: 627 IHTLTGHQSLTSGMEL---KDNILVSGNADSTVKIWDI-KTGQCLQTLQGPHKHQSAVTC 682
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST 380
+ F + +T+S D +K WD TG+ IR T
Sbjct: 683 LQFNKNFV--ITSSDDGTVKLWDLRTGEFIRNLVT 715
Score = 40 (19.1 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 14/57 (24%), Positives = 19/57 (33%)
Query: 9 DEKEDELDKPENQNDQNPDSAALESSPPHILPSKSAAPQVDDTTLALTVAQARQTQS 65
D+ DE + E + + E L S S V D + RQ QS
Sbjct: 167 DQDSDEFEHSEESEREEEEEDGEEEEGEEGLHSPSLRTSVSDHNDNTDQSSGRQRQS 223
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 211 (79.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 73/296 (24%), Positives = 134/296 (45%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC--MRTYMGHSK 341
+P + + H V+A++F P L+ + GMD +VK+W+VF KC + G +
Sbjct: 310 VPTTAMCIFDAHDGEVNAVQFSPG-SRLLATGGMDRRVKLWEVFGD-KCEFKGSLSGSNA 367
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNIL 399
+ I F + G+ L AS D + W + ++ T + +GK+ K D+ + +
Sbjct: 368 GITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKV-LSAKFLLDNAR---I 423
Query: 400 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
++G D+ + WD+ +K + + N I V + ++ DK +R W+
Sbjct: 424 VSGSHDRTLKLWDLRSKVCIKTVFAG-SSCNDI--VCTEQCVMSGHFDKKIRFWDIRSES 480
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAGHIVAGY 518
+++ + + + ++ L+P L + S D+ + I R +N ++ F+ G+
Sbjct: 481 IVREMEL--LGKITALDLNPERTELLSCSRDDLLKIIDLR----INAVRQTFSA---PGF 531
Query: 519 AC-----QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHP 568
C +V FSPDG +V +G EG + W S KV + L G I W P
Sbjct: 532 KCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSP 587
Score = 195 (73.7 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 64/255 (25%), Positives = 109/255 (42%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SG G+++I F G +L+A D +IW V + + T GHS V F D
Sbjct: 363 SGSNAGITSIEF-DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSAKFLLDN 420
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ ++ S+D+ +K WD + I+T G N + +++G DKKI WD
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGS-----SCNDIVCTEQCVMSGHFDKKIRFWD 475
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH-- 470
+ ++ I +E + LG + + ++ S D L++ + I V + S P
Sbjct: 476 IRSESIVREMEL-LGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCG 534
Query: 471 -SMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSPDG 528
+ P+ ++AA S + + I+S + + K+ I A V +SP G
Sbjct: 535 SDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINA-----VAWSPSG 589
Query: 529 RFVMSGDGEGKCWFW 543
V+S D K W
Sbjct: 590 SHVVSVDKGSKAVLW 604
Score = 152 (58.6 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 52/217 (23%), Positives = 100/217 (46%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
RL HT +GH+ V + +F ++ S D +K+WD+ S C++T S DI
Sbjct: 399 RLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWDL-RSKVCIKTVFAGSSC-NDI 455
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST-GKIPYVVKLNPDDDKQNILLAGMSD 405
C + ++ +DK I++WD + ++R GKI + LNP+ + +L D
Sbjct: 456 -VCTEQC-VMSGHFDKKIRFWDIRSESIVREMELLGKIT-ALDLNPE--RTELLSCSRDD 510
Query: 406 K-KIVQWDMNTKEITQEYDQ---HLGAVNT-ITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
KI+ D+ + Q + G+ T + F + S + SL +W V
Sbjct: 511 LLKII--DLRINAVRQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKV 568
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYS 497
K +S+ H S+ +++ P+ + + + ++ +++S
Sbjct: 569 EKVLSKQHGSSINAVAWSPSGSHVVSVDKGSKAVLWS 605
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 202 (76.2 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 71/308 (23%), Positives = 129/308 (41%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
+P++ + T V A+RF G+ L+ G D +K+W+ G +RTY GH V
Sbjct: 13 LPQKRLKTLDCGQGAVRAVRFNVD-GNYCLTCGSDKTLKLWNPLR-GTLLRTYSGHGYEV 70
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLA 401
D + D + + DK + WD +GQV+R F GK+ V+ N ++ ++L+
Sbjct: 71 LDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVN-TVQFN---EEATVILS 126
Query: 402 GMSDKKIVQWDMNTK--EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
G D + WD ++ E Q D+ ++++ D+ + S D +R ++ +
Sbjct: 127 GSIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKVSDHE--VLAGSVDGRVRRYDLRMGQ 184
Query: 460 VIK-YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
+ Y+ P + + SLD+ + + ++ +L + + GH Y
Sbjct: 185 LFSDYVGSP----ITCTCFSRDGQCTLVSSLDSTLRLLD-KDTGELLGE--YTGHKNQEY 237
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
S V+S +GK +FWD + L V +HP E + G
Sbjct: 238 KLDCCLSERDTHVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEPCLLTAMG 297
Query: 579 WDGLIKYW 586
G ++ W
Sbjct: 298 --GSVQCW 303
Score = 182 (69.1 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 60/249 (24%), Positives = 113/249 (45%)
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
AVR + F DG LT DK +K W+ G ++RT+S G V+ D + L +
Sbjct: 27 AVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYS-GHGYEVLDAAGSFDNSS-LCS 84
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI--PV 459
G DK +V WD+ + ++ +++ H G VNT+ F + ++ S D S+R W+ P
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPE 144
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
++ + E + S+ + + + A S+D ++ R+ L + F+ ++ +
Sbjct: 145 PVQTLDEAR-DGISSVKVSDHE--VLAGSVDGRV------RRYDLRMGQLFSDYVGSPIT 195
Query: 520 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ-SKVATCG 578
C FS DG+ + + D + ++ H+ + E+ + V +C
Sbjct: 196 CTC-FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCS 254
Query: 579 WDGLIKYWD 587
DG + +WD
Sbjct: 255 EDGKVFFWD 263
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 210 (79.0 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 96 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNILLAGMS 404
F DG +A+ D +K WD G+++ F TG + VV+ +P++ +L +G S
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE---YLLASGSS 209
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAV 429
D+ I WD+ ++ + G V
Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 200 (75.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 53/213 (24%), Positives = 94/213 (44%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 134
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 191
Query: 474 S--ISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
+ HPN LA+ S D I + E+FQ+
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWDL-EKFQV 223
Score = 194 (73.4 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 293 SGHTKGVSAIRF-FPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCND 351
+GHT V ++R P+ LI++ +++WD+ + K +RT MGH + + F
Sbjct: 60 TGHTSPVESVRLNTPE--ELIVAGSQSGSIRVWDL-EAAKILRTLMGHKANICSLDFHPY 116
Query: 352 GTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQ 410
G + S D NIK WD G V R + ++ +PD L + D +
Sbjct: 117 GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG---KWLASAADDHTVKL 173
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS-EP 467
WD+ ++ E+ H G VN + F N + S D+++R W+ V+ I EP
Sbjct: 174 WDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP 231
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 47/190 (24%), Positives = 82/190 (43%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 95 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + K+ H G E+HP E +A+
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D I++WD
Sbjct: 208 SSDRTIRFWD 217
Score = 141 (54.7 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 37/112 (33%), Positives = 56/112 (50%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K V + GH++ V +RF P G + SA D VK+WD+ +GK M + GH+ V
Sbjct: 137 KGCVFRYRGHSQAVRCLRFSPD-GKWLASAADDHTVKLWDL-TAGKMMSEFPGHTGPVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPY----VVKLNP 391
+ F + + S D+ I++WD E QV+ G + Y VV L+P
Sbjct: 195 VEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSP 246
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 44/210 (20%), Positives = 85/210 (40%)
Query: 352 GTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQ 410
G T D + W I + + P V+LN ++ +++AG I
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEE---LIVAGSQSGSIRV 89
Query: 411 WDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHM 469
WD+ +I + H + ++ F + S D ++++W+ V +Y H
Sbjct: 90 WDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRY--RGHS 147
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
++ + P+ WLA+ + D+ + ++ +++ F GH G V F P+
Sbjct: 148 QAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE---FPGH--TGPVNVVEFHPNEY 202
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+ SG + FWD + F+ + C EG
Sbjct: 203 LLASGSSDRTIRFWDLEK---FQVVSCIEG 229
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 63/211 (29%), Positives = 101/211 (47%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L+HT GHT S +R G ++++ DT +++WDV SG+ + T GH AVR +
Sbjct: 330 LLHTLQGHT---STVRCMAMAGSILVTGSRDTTLRVWDV-ESGRHLATLHGHHAAVRCVQ 385
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
F DGT ++ YD +K W+ TG+ IRT TG V L + ++ +I+ +G D
Sbjct: 386 F--DGTTVVSGGYDFTVKIWNAHTGRCIRTL-TGHNNRVYSLLFESER-SIVCSGSLDTS 441
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRR--FVTSSDDKSLRVWEFGIPVVIKYIS 465
I WD E QE L ++T R V+ + D +RVW+ + +S
Sbjct: 442 IRVWDFTRPE-GQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLS 500
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
H ++ S+ N +A S D + ++
Sbjct: 501 G-HRSAITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 167 (63.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + T GH V ++F G ++S G D VKIW+ ++G+C+RT GH+ V +
Sbjct: 369 RHLATLHGHHAAVRCVQFD---GTTVVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSL 424
Query: 347 SFCNDGTKFLTASYDKNIKYWD-TET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMS 404
F ++ + + S D +I+ WD T GQ G + + NIL++ +
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL---RGNILVSCNA 481
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
D + WD++ H A+ ++ + N TSSDD ++++W+
Sbjct: 482 DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNM-VATSSDDGTVKLWD 530
Score = 166 (63.5 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 63/280 (22%), Positives = 113/280 (40%)
Query: 311 LILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV--RDISFCNDGTKFLTASYDKNIKYWD 368
++++ D +K+W + + G+ M T +GH+ V IS C G ++ S D+ +K W
Sbjct: 268 VLVTGSDDNTLKVWCI-DKGEVMYTLVGHTGGVWTSQISQC--GRYIVSGSTDRTVKVWS 324
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
T G ++ T G V + +IL+ G D + WD+ + H A
Sbjct: 325 TVDGSLLHTLQ-GHTSTVRCMAMAG---SILVTGSRDTTLRVWDVESGRHLATLHGHHAA 380
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + F + V+ D ++++W I+ ++ H + + S+ + + + S
Sbjct: 381 VRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTG-HNNRVYSLLFESERSIVCSGS 437
Query: 489 LDNQILIYS-TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
LD I ++ TR Q GH Q+ G ++S + + WD
Sbjct: 438 LDTSIRVWDFTRPEGQ-ECVALLQGHTSLTSGMQLR----GNILVSCNADSHVRVWDIHE 492
Query: 548 CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
L H +W ++ VAT DG +K WD
Sbjct: 493 GTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWD 530
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GHT S ++ G++++S D+ V++WD+ + G C+ GH A+ + +
Sbjct: 461 GHTSLTSGMQL---RGNILVSCNADSHVRVWDI-HEGTCVHMLSGHRSAITSLQWFGRNM 516
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFST 380
T+S D +K WD E G +IR T
Sbjct: 517 -VATSSDDGTVKLWDIERGALIRDLVT 542
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 63/211 (29%), Positives = 101/211 (47%)
Query: 288 LVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
L+HT GHT S +R G ++++ DT +++WDV SG+ + T GH AVR +
Sbjct: 330 LLHTLQGHT---STVRCMAMAGSILVTGSRDTTLRVWDV-ESGRHLATLHGHHAAVRCVQ 385
Query: 348 FCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
F DGT ++ YD +K W+ TG+ IRT TG V L + ++ +I+ +G D
Sbjct: 386 F--DGTTVVSGGYDFTVKIWNAHTGRCIRTL-TGHNNRVYSLLFESER-SIVCSGSLDTS 441
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRR--FVTSSDDKSLRVWEFGIPVVIKYIS 465
I WD E QE L ++T R V+ + D +RVW+ + +S
Sbjct: 442 IRVWDFTRPE-GQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLS 500
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
H ++ S+ N +A S D + ++
Sbjct: 501 G-HRSAITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 167 (63.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 46/170 (27%), Positives = 81/170 (47%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
R + T GH V ++F G ++S G D VKIW+ ++G+C+RT GH+ V +
Sbjct: 369 RHLATLHGHHAAVRCVQFD---GTTVVSGGYDFTVKIWNA-HTGRCIRTLTGHNNRVYSL 424
Query: 347 SFCNDGTKFLTASYDKNIKYWD-TET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMS 404
F ++ + + S D +I+ WD T GQ G + + NIL++ +
Sbjct: 425 LFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQL---RGNILVSCNA 481
Query: 405 DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
D + WD++ H A+ ++ + N TSSDD ++++W+
Sbjct: 482 DSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNM-VATSSDDGTVKLWD 530
Score = 166 (63.5 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 63/280 (22%), Positives = 113/280 (40%)
Query: 311 LILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV--RDISFCNDGTKFLTASYDKNIKYWD 368
++++ D +K+W + + G+ M T +GH+ V IS C G ++ S D+ +K W
Sbjct: 268 VLVTGSDDNTLKVWCI-DKGEVMYTLVGHTGGVWTSQISQC--GRYIVSGSTDRTVKVWS 324
Query: 369 TETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGA 428
T G ++ T G V + +IL+ G D + WD+ + H A
Sbjct: 325 TVDGSLLHTLQ-GHTSTVRCMAMAG---SILVTGSRDTTLRVWDVESGRHLATLHGHHAA 380
Query: 429 VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQS 488
V + F + V+ D ++++W I+ ++ H + + S+ + + + S
Sbjct: 381 VRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTG-HNNRVYSLLFESERSIVCSGS 437
Query: 489 LDNQILIYS-TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
LD I ++ TR Q GH Q+ G ++S + + WD
Sbjct: 438 LDTSIRVWDFTRPEGQ-ECVALLQGHTSLTSGMQLR----GNILVSCNADSHVRVWDIHE 492
Query: 548 CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
L H +W ++ VAT DG +K WD
Sbjct: 493 GTCVHMLSGHRSAITSLQW--FGRNMVATSSDDGTVKLWD 530
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GHT S ++ G++++S D+ V++WD+ + G C+ GH A+ + +
Sbjct: 461 GHTSLTSGMQL---RGNILVSCNADSHVRVWDI-HEGTCVHMLSGHRSAITSLQWFGRNM 516
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFST 380
T+S D +K WD E G +IR T
Sbjct: 517 -VATSSDDGTVKLWDIERGALIRDLVT 542
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 220 (82.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 51/174 (29%), Positives = 91/174 (52%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ T++GH+ GV+ ++F KY +++ DT +KIW + +SG+C++T GH+K VR + F
Sbjct: 376 IKTFTGHSDGVTCLQFNRKY---LMTGSYDTTIKIWKI-DSGECVKTLTGHTKGVRALVF 431
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D K ++ D IK W+ TGQ I T+ G VV + D +++G +D +
Sbjct: 432 --DNQKLISGGLDSTIKVWNYHTGQCIATYR-GHEDAVVSV---DFTNKSIVSGSADHTV 485
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
W ++++ H VN + + ++SDD ++R+W+ IK
Sbjct: 486 RVWHVDSRTC-YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIK 538
Score = 180 (68.4 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 47/151 (31%), Positives = 78/151 (51%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V T +GHTKGV A+ F ++S G+D+ +K+W+ +++G+C+ TY GH AV + F
Sbjct: 416 VKTLTGHTKGVRALVFD---NQKLISGGLDSTIKVWN-YHTGQCIATYRGHEDAVVSVDF 471
Query: 349 CNDGTKFLTASYDKNIKYW--DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 406
N ++ S D ++ W D+ T +R T + +V K++ N + + D
Sbjct: 472 TNKS--IVSGSADHTVRVWHVDSRTCYTLRGH-TDWVNHV-KIH---SASNTIFSASDDT 524
Query: 407 KIVQWDMNTKEITQ-----EYDQHLGAVNTI 432
I WDMN+ E + E + H+G V I
Sbjct: 525 TIRMWDMNSNECIKVFGGMENNGHIGQVQCI 555
Score = 136 (52.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
H + SA +D +K+WDV +GKC+RT GH + V I+ D + ++ ++D+ IK WD
Sbjct: 640 HFLTSA-LDNTIKLWDVA-TGKCIRTQFGHIEGVWSIAA--DTFRIISGAHDRLIKVWDL 695
Query: 370 ETGQVIRTFS 379
+ G+ + TFS
Sbjct: 696 QNGKCLHTFS 705
Score = 107 (42.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
T FLT++ D IK WD TG+ IRT G I V + D + +++G D+ I WD
Sbjct: 639 THFLTSALDNTIKLWDVATGKCIRT-QFGHIEGVWSIAADTFR---IISGAHDRLIKVWD 694
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEF 455
+ + + + +V+ + D+ RFV ++ ++++ F
Sbjct: 695 LQNGKCLHTFSNN-SSVSCVGLSDS--RFVAGLENGEVKMYCF 734
Score = 93 (37.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 25/90 (27%), Positives = 45/90 (50%)
Query: 253 STFHGKEEK----DYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKY 308
+T+ G E+ D+ +S V+ D H + R +T GHT V+ ++
Sbjct: 457 ATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWH--VDSRTCYTLRGHTDWVNHVKIHSA- 513
Query: 309 GHLILSAGMDTKVKIWDVFNSGKCMRTYMG 338
+ I SA DT +++WD+ NS +C++ + G
Sbjct: 514 SNTIFSASDDTTIRMWDM-NSNECIKVFGG 542
Score = 37 (18.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 9 DEKEDELDKPENQNDQNPDSAALESSP 35
D K+ +LD +N P S + P
Sbjct: 328 DRKKVKLDTEDNHQKVVPTSVVVRKRP 354
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 210 (79.0 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 53/171 (30%), Positives = 84/171 (49%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S +DT +K+WDV G C+ Y H++AVR +
Sbjct: 96 KILRTLLGHKANICSLDFHP-YGSFVASGSLDTDIKLWDVRRKG-CIFKYKSHTQAVRCL 153
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMSD 405
F DG +A+ D +K WD G+V+ F+ P VV+ +P + +L +G SD
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSE---YLLASGSSD 210
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRV--WE 454
+ I WD+ + ++ V I F + D SLRV WE
Sbjct: 211 RTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWE 260
Score = 195 (73.7 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 57/255 (22%), Positives = 110/255 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H+ VS++ G L+ + G D +V +W V N C+ + GH+ + +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSV-NKPNCVMSLTGHTTPIESLQISAKEEL 77
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN 414
+ S +I+ WD E +++RT G + L+ + + +G D I WD+
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTL-LGHKANICSLD-FHPYGSFVASGSLDTDIKLWDVR 135
Query: 415 TKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS 474
K +Y H AV + F + + +++DD ++++W+ V+ + H +
Sbjct: 136 RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM-FEFTGHSGPVNV 194
Query: 475 ISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 534
+ HP+ LA+ S D I + E+F + V C + F+PDG + G
Sbjct: 195 VEFHPSEYLLASGSSDRTIRFWDL-EKFHVVSCIEEEATPVR---C-ILFNPDGCCLYGG 249
Query: 535 DGEG-KCWFWDWKSC 548
+ + + W+ + C
Sbjct: 250 FQDSLRVYGWEPERC 264
Score = 180 (68.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 43/179 (24%), Positives = 83/179 (46%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
V + +GHT + +++ K LI++ +++WD+ + K +RT +GH + + F
Sbjct: 56 VMSLTGHTTPIESLQISAKE-ELIVAGSQSGSIRVWDL-EAAKILRTLLGHKANICSLDF 113
Query: 349 CNDGTKFLTASYDKNIKYWDTET-GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
G+ + S D +IK WD G + + S + ++ +PD L + D
Sbjct: 114 HPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDG---KWLASAADDHT 170
Query: 408 IVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISE 466
+ WD+ ++ E+ H G VN + F + + S D+++R W+ V+ I E
Sbjct: 171 VKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEE 229
Score = 174 (66.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 48/190 (25%), Positives = 83/190 (43%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H + ++ V S S+RVW+
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP +++A+ SLD I ++ R + + K K H A
Sbjct: 95 AKILRTLLG-HKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYK---SHTQA- 149
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATC 577
C + FSPDG+++ S + WD + KV H G E+HP E +A+
Sbjct: 150 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYL-LASG 207
Query: 578 GWDGLIKYWD 587
D I++WD
Sbjct: 208 SSDRTIRFWD 217
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 38/129 (29%), Positives = 57/129 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
K + + HT+ V +RF P G + SA D VK+WD+ +GK M + GHS V
Sbjct: 137 KGCIFKYKSHTQAVRCLRFSPD-GKWLASAADDHTVKLWDL-TAGKVMFEFTGHSGPVNV 194
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPY-VVKLNPDDDKQNILLAGMS 404
+ F + S D+ I++WD E V+ P + NPD L G
Sbjct: 195 VEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGC---CLYGGFQ 251
Query: 405 DK-KIVQWD 412
D ++ W+
Sbjct: 252 DSLRVYGWE 260
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 87/332 (26%), Positives = 140/332 (42%)
Query: 253 STFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLI 312
S +EEKD+ S V P K+ I +L+HT HT + +RF G
Sbjct: 265 SNVPNREEKDWTVTSNV-PNKEPP-------ISVQLLHTLE-HTSVICYVRFSAD-GKF- 313
Query: 313 LSAGMDTKVKIWDVFNSGKCMRTYMGHSKA------VRDISFCNDGTKFLTASYDKNIKY 366
L+ G + +++V +GK + S VR ++F DG T D+ I+
Sbjct: 314 LATGCNRAAMVFNV-ETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRI 372
Query: 367 WDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHL 426
WD +V R TG + L+ D + L++G D+ + WD+ E Q+ H
Sbjct: 373 WDIAQKRVYRLL-TGHEQEIYSLDFSKDGKT-LVSGSGDRTVCLWDVEAGE--QKLILHT 428
Query: 427 G-AVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLA 485
V T+ F + + S DK +R+W +V + H S+ S++ P+ +L
Sbjct: 429 DDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQL--HGHEESVYSVAFSPDGKYLV 486
Query: 486 AQSLDNQILIYS----TRERFQLNK-----KKRFAGHIVAGYACQVNFSPDGRFVMSGDG 536
+ SLDN I ++ + + K K+ F GH + V SPDG++++SG
Sbjct: 487 SGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGH--KDFILSVTVSPDGKWIISGSK 544
Query: 537 EGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHP 568
+ FW S TL+ H I P
Sbjct: 545 DRTIQFWSPDSPHSQLTLQGHNNSVISVAVSP 576
Score = 184 (69.8 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 57/259 (22%), Positives = 108/259 (41%)
Query: 299 VSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTA 358
V ++ F P G + + D +++IWD+ + R GH + + + F DG ++
Sbjct: 349 VRSVAFSPD-GKYLATGVEDQQIRIWDIAQK-RVYRLLTGHEQEIYSLDFSKDGKTLVSG 406
Query: 359 SYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI 418
S D+ + WD E G+ T V +PD + AG DK I W ++ +
Sbjct: 407 SGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQ---FIAAGSLDKVIRIWT-SSGTL 462
Query: 419 TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI-----PV------VIKYISEP 467
++ H +V ++ F + + V+ S D ++++WE P + K
Sbjct: 463 VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTG 522
Query: 468 HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 527
H + S+++ P+ W+ + S D I +S + + GH V SP+
Sbjct: 523 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSP---HSQLTLQGH--NNSVISVAVSPN 577
Query: 528 GRFVMSGDGEGKCWFWDWK 546
G +G G+ + W ++
Sbjct: 578 GHCFATGSGDLRARIWSYE 596
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 53/232 (22%), Positives = 106/232 (45%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V + RF L LS D ++ WD+ + + Y GH+ V D+
Sbjct: 358 GHCGPVYSTRFLADSSGL-LSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPYSL 415
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQW 411
F + S+D+ + W + +R ++ G + V VK +P+ N L G +DK + W
Sbjct: 416 YFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS---NYLATGSTDKTVRLW 471
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+ + H G V ++ F N + ++ +D+ L++W+ + K + H +
Sbjct: 472 SAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDN 530
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
+ S++ P+++ +A+ S+DN + ++ R + +G +V Y Q++
Sbjct: 531 ITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMS 582
Score = 198 (74.8 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 49/189 (25%), Positives = 87/189 (46%)
Query: 399 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP 458
LL+ D I WD+ + T Y H V + + F + S D++ R+W F
Sbjct: 375 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRT 434
Query: 459 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
++ I H+ + + HPN+N+LA S D + ++S + Q N + F GH G
Sbjct: 435 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QGNSVRLFTGH--RGP 488
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
+ FSP+G+++ S + + WD S +++ L+ H + P + S +A+
Sbjct: 489 VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSLIASAS 547
Query: 579 WDGLIKYWD 587
D ++ WD
Sbjct: 548 MDNSVRVWD 556
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 55/218 (25%), Positives = 89/218 (40%)
Query: 328 NSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 387
N+G M+ GH V F D + L+ S D +I+YWD G T Y V
Sbjct: 348 NAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPV 405
Query: 388 KLNPDDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD 446
+ D ++ A G D+ W + + Y HL V+ + F N+ T S
Sbjct: 406 -WDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 464
Query: 447 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 506
DK++R+W ++ + H + S++ PN +LA+ D ++ ++ L K
Sbjct: 465 DKTVRLWSAQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG-TLYK 522
Query: 507 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
+ R GH + FSPD + S + WD
Sbjct: 523 ELR--GH--TDNITSLTFSPDSSLIASASMDNSVRVWD 556
Score = 137 (53.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 37/137 (27%), Positives = 60/137 (43%)
Query: 280 DHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGH 339
D Y P R+ ++GH V ++F P +L + D V++W G +R + GH
Sbjct: 432 DRTY-PLRI---YAGHLADVDCVKFHPNSNYLA-TGSTDKTVRLWSA-QQGNSVRLFTGH 485
Query: 340 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 399
V ++F +G +A D+ +K WD +G + + G + L D I
Sbjct: 486 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR-GHTDNITSLTFSPDSSLIA 544
Query: 400 LAGMSDKKIVQWDM-NT 415
A M D + WD+ NT
Sbjct: 545 SASM-DNSVRVWDIRNT 560
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 209 (78.6 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 71/295 (24%), Positives = 132/295 (44%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC--MRTYMGHSK 341
+P + + H V+A++F P L+ + GMD +VK+W+VF KC + G +
Sbjct: 310 VPATALCVFDAHDGEVNAVQFSPG-SRLLATGGMDRRVKLWEVFGE-KCEFKGSLSGSNA 367
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNIL 399
+ I F + G+ L AS D + W + ++ T + +GK+ K D+ + +
Sbjct: 368 GITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKV-LSAKFLLDNAR---I 423
Query: 400 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
++G D+ + WD+ +K + + N I V + ++ DK +R W+
Sbjct: 424 VSGSHDRTLKLWDLRSKVCIKTVFAG-SSCNDI--VCTEQCVMSGHFDKKIRFWDIRSES 480
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
+++ + + + ++ L+P L + S D+ + + R K+ F+ G+
Sbjct: 481 IVREMEL--LGKITALDLNPERTELLSCSRDDLLKVIDLRTNAI---KQTFSA---PGFK 532
Query: 520 C-----QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL-KCHEGVCIGCEWHP 568
C +V FSPDG +V +G EG + W + KV + L K H W P
Sbjct: 533 CGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSP 587
Score = 188 (71.2 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 63/255 (24%), Positives = 110/255 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SG G+++I F G +L+A D +IW V + + T GHS V F D
Sbjct: 363 SGSNAGITSIEF-DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSAKFLLDN 420
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ ++ S+D+ +K WD + I+T G N + +++G DKKI WD
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGS-----SCNDIVCTEQCVMSGHFDKKIRFWD 475
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH-- 470
+ ++ I +E + LG + + ++ S D L+V + + + S P
Sbjct: 476 IRSESIVREMEL-LGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCG 534
Query: 471 -SMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSPDG 528
+ P+ +++AA S + + I+S + + K+ + I A V +SP G
Sbjct: 535 SDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINA-----VAWSPSG 589
Query: 529 RFVMSGDGEGKCWFW 543
V+S D K W
Sbjct: 590 SHVVSVDKGCKAVLW 604
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 207 (77.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 63/251 (25%), Positives = 112/251 (44%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
++++ T GH+K V+++ F P L+ SA D ++IW V N+ C++ H +V
Sbjct: 255 EQILATLKGHSKKVTSVVFHPSQD-LVFSASPDATIRIWSVPNAS-CVQVVRAHEGSVTG 312
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF---STGKIPYVVKLNPDDDKQNILLAG 402
+S G L++S D+ + D +TG+V+ S+G + +PD I G
Sbjct: 313 LSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDG---LIFGTG 369
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
D +I WD+ + + H G + +I F +N T++DD S+++W+ K
Sbjct: 370 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 429
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQV 522
+ + + S+ + +LA D QI I Q + F H +G V
Sbjct: 430 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICK-----QWTEILHFTEH--SGLTTGV 482
Query: 523 NFSPDGRFVMS 533
F +F+ S
Sbjct: 483 AFGHHAKFIAS 493
Score = 166 (63.5 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 59/236 (25%), Positives = 102/236 (43%)
Query: 330 GKCMRTYMGHSKAVRDI---SFC-NDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKI 383
G+ R + HS ++ I C +D K LT DKN+ +D + Q++ T + K+
Sbjct: 209 GRSPRMWGLHSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKV 268
Query: 384 PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVT 443
VV +P D ++ + D I W + Q H G+V ++ ++
Sbjct: 269 TSVV-FHPSQD---LVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLS 324
Query: 444 SSDDKSLRVWEFG-IP---VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
SSDD+ W F I V+ K E ++ HP+ ++D+QI I+ +
Sbjct: 325 SSDDQ---YWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLK 381
Query: 500 ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
ER + F GH +G + FS +G ++ + + WD + K F+TL+
Sbjct: 382 ERTNV---ANFPGH--SGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQ 432
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 66/275 (24%), Positives = 116/275 (42%)
Query: 237 DKGNAGGEKGEHVE---DKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWS 293
D G G E ++ DK+T E K +G++ P++ A +P R W
Sbjct: 161 DLGELAGMTPEIIQKPQDKATVLTTERKK-RGKT---VPEELVEARGAQQVPGRSPRMWG 216
Query: 294 GHTK---GVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCN 350
H+ G+ A+ P + IL+ G D V ++D +S + + T GHSK V + F
Sbjct: 217 LHSASIPGILALDLCPSDTNKILTGGADKNVIVFDK-SSEQILATLKGHSKKVTSVVFHP 275
Query: 351 DGTKFLTASYDKNIKYWDTETG---QVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 407
+AS D I+ W QV+R G + + L+ D LL+ D+
Sbjct: 276 SQDLVFSASPDATIRIWSVPNASCVQVVRAHE-GSVTGL-SLHATGD---YLLSSSDDQY 330
Query: 408 IVQWDMNT-KEITQEYDQHLG-AVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 465
D+ T + +T+ D+ G A+ F + F T + D +++W+ +
Sbjct: 331 WAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFP 390
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRE 500
H + SI+ N +LA + D+ + ++ R+
Sbjct: 391 G-HSGPITSIAFSENGYYLATAADDSSVKLWDLRK 424
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 46/208 (22%), Positives = 86/208 (41%)
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
+ IP ++ L+ N +L G +DK ++ +D ++++I H V ++ F +
Sbjct: 219 SASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQD 278
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++S D ++R+W ++ + H S+ +SLH ++L + S D+Q +S
Sbjct: 279 LVFSASPDATIRIWSVPNASCVQVV-RAHEGSVTGLSLHATGDYLLSSS-DDQYWAFSDI 336
Query: 500 ERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEG 559
+ ++ K A C F PDG +G + + WD K H G
Sbjct: 337 QTGRVLTKVTDESSGCA-LTC-AQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSG 394
Query: 560 VCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ +AT D +K WD
Sbjct: 395 PITSIAFSE-NGYYLATAADDSSVKLWD 421
Score = 129 (50.5 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 45/162 (27%), Positives = 78/162 (48%)
Query: 299 VSAIRFFPKYGHLILSAG-MDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLT 357
++ +F P G LI G MD+++KIWD+ + + GHS + I+F +G T
Sbjct: 354 LTCAQFHPD-G-LIFGTGTMDSQIKIWDLKERTN-VANFPGHSGPITSIAFSENGYYLAT 410
Query: 358 ASYDKNIKYWDTETGQVIRTFSTGKIP--YVVKLNPDDDKQNILLAGMSDKKIV---QWD 412
A+ D ++K WD ++ F T ++ + VK D L G +D +I QW
Sbjct: 411 AADDSSVKLWDLRK---LKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWT 467
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD-DKSLRVW 453
EI + +H G + F ++ +F+ S+ D+SL+ +
Sbjct: 468 ----EILH-FTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFY 503
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 51/189 (26%), Positives = 90/189 (47%)
Query: 399 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP 458
LL+ D I WD+ + T Y H V + ++ F ++S D++ R+W F
Sbjct: 353 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRT 412
Query: 459 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
++ I H+ + + HPN+N+LA S D + ++ST+ Q N + F GH G
Sbjct: 413 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQ---QGNSVRLFTGH--RGP 466
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
+ FSP+G+++ S + + WD S +++ L+ H + P + S VA+
Sbjct: 467 VLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSSLVASAS 525
Query: 579 WDGLIKYWD 587
D ++ WD
Sbjct: 526 MDNSVRVWD 534
Score = 204 (76.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 53/232 (22%), Positives = 105/232 (45%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V + RF L LS D ++ WD+ + + Y GH+ V D+
Sbjct: 336 GHCGPVYSTRFLADSSGL-LSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDLDISPHSL 393
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQW 411
F +AS+D+ + W + +R ++ G + V VK +P+ N L G +DK + W
Sbjct: 394 YFASASHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS---NYLATGSTDKTVRLW 449
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+ + H G V ++ F N + ++ +D+ L++W+ + K + H +
Sbjct: 450 STQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKEL-RGHTDN 508
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
+ S++ P+++ +A+ S+DN + ++ R + +V Y Q++
Sbjct: 509 ITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMS 560
Score = 165 (63.1 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 57/221 (25%), Positives = 90/221 (40%)
Query: 328 NSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 387
N G M+ GH V F D + L+ S D +I+YWD G T Y V
Sbjct: 326 NLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPV 383
Query: 388 KLNPDDDKQNILLAGMS-DKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD 446
+ D ++ A S D+ W + + Y HL V+ + F N+ T S
Sbjct: 384 -WDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 442
Query: 447 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 506
DK++R+W ++ + H + S++ PN +LA+ D ++ ++ L K
Sbjct: 443 DKTVRLWSTQQGNSVRLFTG-HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG-TLYK 500
Query: 507 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
+ R GH + FSPD V S + WD +S
Sbjct: 501 ELR--GH--TDNITSLTFSPDSSLVASASMDNSVRVWDIRS 537
Score = 137 (53.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 35/144 (24%), Positives = 61/144 (42%)
Query: 280 DHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGH 339
D Y P R+ ++GH V ++F P +L + D V++W G +R + GH
Sbjct: 410 DRTY-PLRI---YAGHLADVDCVKFHPNSNYLA-TGSTDKTVRLWST-QQGNSVRLFTGH 463
Query: 340 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 399
V ++F +G +A D+ +K WD +G + + G + L D +
Sbjct: 464 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR-GHTDNITSLTFSPDSSLVA 522
Query: 400 LAGMSDKKIVQWDMNTKEITQEYD 423
A M D + WD+ + + D
Sbjct: 523 SASM-DNSVRVWDIRSSHCSTPAD 545
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 54/232 (23%), Positives = 105/232 (45%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V + RF L LS D ++ WD+ + + Y GH+ V D+
Sbjct: 340 GHCGPVYSTRFLADSSGL-LSCSEDMSIRYWDLGSFTNTV-LYQGHAYPVWDVDISPFSL 397
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQW 411
F + S+D+ + W + +R ++ G + V VK +P+ N L G +DK + W
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYA-GHLADVDCVKFHPNS---NYLATGSTDKTVRLW 453
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
+ + H G V +++F N + ++ +D+ L++W+ + K + H S
Sbjct: 454 SAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL-RGHTDS 512
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN 523
+ S++ P++ +A+ S+DN + ++ R +G +V Y Q++
Sbjct: 513 ITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMS 564
Score = 201 (75.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 49/189 (25%), Positives = 87/189 (46%)
Query: 399 LLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP 458
LL+ D I WD+ + T Y H V + + F + S D++ R+W F
Sbjct: 357 LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRT 416
Query: 459 VVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGY 518
++ I H+ + + HPN+N+LA S D + ++S + Q N + F GH G
Sbjct: 417 YPLR-IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ---QGNSVRLFTGH--RGP 470
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG 578
++FSP+G+++ S + + WD S +F+ L+ H + P + +A+
Sbjct: 471 VLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSP-DSGLIASAS 529
Query: 579 WDGLIKYWD 587
D ++ WD
Sbjct: 530 MDNSVRVWD 538
Score = 164 (62.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 57/221 (25%), Positives = 92/221 (41%)
Query: 328 NSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV 387
N+G M+ GH V F D + L+ S D +I+YWD G T Y V
Sbjct: 330 NTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL--GSFTNTVLYQGHAYPV 387
Query: 388 KLNPDDDKQNILLA-GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSD 446
+ D ++ A G D+ W + + Y HL V+ + F N+ T S
Sbjct: 388 -WDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGST 446
Query: 447 DKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNK 506
DK++R+W ++ + H + S+S PN +LA+ D ++ ++ L K
Sbjct: 447 DKTVRLWSAQQGNSVRLFTG-HRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG-TLFK 504
Query: 507 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS 547
+ R GH + + FSPD + S + WD +S
Sbjct: 505 ELR--GHTDS--ITSLAFSPDSGLIASASMDNSVRVWDIRS 541
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/136 (26%), Positives = 59/136 (43%)
Query: 280 DHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGH 339
D Y P R+ ++GH V ++F P +L + D V++W G +R + GH
Sbjct: 414 DRTY-PLRI---YAGHLADVDCVKFHPNSNYLA-TGSTDKTVRLWSA-QQGNSVRLFTGH 467
Query: 340 SKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNIL 399
V +SF +G +A D+ +K WD +G + + G + L D I
Sbjct: 468 RGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR-GHTDSITSLAFSPDSGLIA 526
Query: 400 LAGMSDKKIVQWDMNT 415
A M D + WD+ +
Sbjct: 527 SASM-DNSVRVWDIRS 541
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 213 (80.0 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 60/263 (22%), Positives = 113/263 (42%)
Query: 299 VSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTA 358
+ ++ F P G + + D ++++WD+ + GH + + + F +G +
Sbjct: 319 IRSVCFSPD-GKYLATGAEDKQIRVWDIATR-TIKHIFSGHEQDIYSLDFAGNGRYIASG 376
Query: 359 SYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI 418
S DK ++ WD G+++ T S V ++PD + AG DK + WD T +
Sbjct: 377 SGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSPDG---LYVAAGSLDKTVRVWDTTTGYL 433
Query: 419 TQEY---DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS---------- 465
+ D H +V ++ F N + V+ S DK++++WE +P +Y S
Sbjct: 434 VERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQ-QYNSAGKGGKCHRT 492
Query: 466 -EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNF 524
E H + S+ L P+ +W+ + S D + + + N + GH V
Sbjct: 493 FEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFW---DPITGNAQMMLQGH--KNSVISVAP 547
Query: 525 SPDGRFVMSGDGEGKCWFWDWKS 547
SP G +G G+ + W + +
Sbjct: 548 SPTGNLFATGSGDMRARIWRYSA 570
Score = 183 (69.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 53/216 (24%), Positives = 105/216 (48%)
Query: 336 YMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQ---VIRTFSTGKIP--YV--VK 388
++ H V + F DG K+L +++ + +D GQ V++ S K Y+ V
Sbjct: 265 HLVHDSVVCCVRFSRDG-KYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVC 323
Query: 389 LNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDK 448
+PD L G DK+I WD+ T+ I + H + ++ F N R + S DK
Sbjct: 324 FSPDG---KYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDK 380
Query: 449 SLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKK 508
++R+W+ ++ +S + ++++ P+ ++AA SLD + ++ T + + + +
Sbjct: 381 TVRLWDIAEGKLVYTLSIED--GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLE 438
Query: 509 RFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
GH + Y+ V F+P+G+ ++SG + W+
Sbjct: 439 NPDGHKDSVYS--VAFAPNGKELVSGSLDKTIKLWE 472
Score = 152 (58.6 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 52/228 (22%), Positives = 99/228 (43%)
Query: 286 KRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRD 345
+ + H +SGH + + ++ F G I S D V++WD+ GK + T + V
Sbjct: 348 RTIKHIFSGHEQDIYSLDFAGN-GRYIASGSGDKTVRLWDIAE-GKLVYT-LSIEDGVTT 404
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIP--YVVKLNPDDDKQNILLA 401
++ DG S DK ++ WDT TG ++ G Y V P+ + L++
Sbjct: 405 VAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKE---LVS 461
Query: 402 GMSDKKIVQWDMNTK-----------EITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSL 450
G DK I W++N + + ++ H V ++ + ++ S D+ +
Sbjct: 462 GSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGV 521
Query: 451 RVWEFGIPVV--IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
+ W+ P+ + + + H +S+ S++ P N A S D + I+
Sbjct: 522 QFWD---PITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 143 (55.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 38/139 (27%), Positives = 64/139 (46%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDV------FNS----GKC 332
Y+ +RL + GH V ++ F P G ++S +D +K+W++ +NS GKC
Sbjct: 432 YLVERLENP-DGHKDSVYSVAFAPN-GKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKC 489
Query: 333 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPD 392
RT+ GH V + DG ++ S D+ +++WD TG + G V+ + P
Sbjct: 490 HRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNA-QMMLQGHKNSVISVAPS 548
Query: 393 DDKQNILLAGMSDKKIVQW 411
N+ G D + W
Sbjct: 549 PTG-NLFATGSGDMRARIW 566
Score = 39 (18.8 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 40 PSKSAAPQVDDTTLALTVAQARQTQSRPIDPSQHVVAYNP 79
P A PQ LA ++ +RP P+Q VV P
Sbjct: 185 PPGPATPQ-QAHQLAYPESRVSPQLARPTPPNQPVVRDRP 223
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 75/312 (24%), Positives = 139/312 (44%)
Query: 271 PPKD-AK---AANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDV 326
PP+D A+ A+ +P + + H V+A++F P L+ + GMD +VK+W+V
Sbjct: 293 PPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPG-SRLLATGGMDRRVKLWEV 351
Query: 327 FNSGKC--MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGK 382
+C + G + + I F + G+ L AS D + W + ++ T + +GK
Sbjct: 352 LGD-RCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGK 410
Query: 383 IPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFV 442
+ K D+ + +++G D+ + WD+ +K + + N I V + +
Sbjct: 411 V-LSAKFLLDNAR---IVSGSHDRTLKLWDLRSKVCNIKTVFAGSSCNDI--VCTEQCVM 464
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERF 502
+ DK +R W+ ++K + + + ++ L+ L S D+ + I R
Sbjct: 465 SGHFDKKIRFWDIRTESIVKELEL--LGRITALDLNSERTELLTCSRDDLLKIIDLRVGA 522
Query: 503 QLNKKKRFAGHIVAGYAC-----QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
K+ F+ G+ C +V FSPDG +V +G +G + W+ + K+ RTL H
Sbjct: 523 V---KQTFSAQ---GFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKH 576
Query: 558 EGVCIGC-EWHP 568
I W P
Sbjct: 577 HSSPINAVAWSP 588
Score = 193 (73.0 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 64/256 (25%), Positives = 109/256 (42%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SG G+++I F G +L+A D +IW V + + T GHS V F D
Sbjct: 363 SGSNAGITSIEF-DSAGSYLLAASNDFASRIWTV-DDNRLRHTLTGHSGKVLSAKFLLDN 420
Query: 353 TKFLTASYDKNIKYWDTETGQV-IRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
+ ++ S+D+ +K WD + I+T G N + +++G DKKI W
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCNIKTVFAGS-----SCNDIVCTEQCVMSGHFDKKIRFW 475
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH- 470
D+ T+ I +E + LG + + +T S D L++ + + V + S
Sbjct: 476 DIRTESIVKELEL-LGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKC 534
Query: 471 --SMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSPD 527
+ P+ N++AA S D + +++ + + K + I A V +SP
Sbjct: 535 GSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINA-----VAWSPA 589
Query: 528 GRFVMSGDGEGKCWFW 543
G V+S D K W
Sbjct: 590 GAHVVSVDKGNKAVLW 605
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 55/264 (20%), Positives = 109/264 (41%)
Query: 246 GEHVEDKSTFHGKE------EKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGV 299
G+ E K + G E D G +A D A+ RL HT +GH+ V
Sbjct: 353 GDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDF-ASRIWTVDDNRLRHTLTGHSGKV 411
Query: 300 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC-MRTYMGHSKAVRDISFCNDGTKFLTA 358
+ +F ++ S D +K+WD+ S C ++T S DI C + ++
Sbjct: 412 LSAKFLLDNARIV-SGSHDRTLKLWDL-RSKVCNIKTVFAGSSC-NDI-VCTEQC-VMSG 466
Query: 359 SYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDK-KIVQWDMNTKE 417
+DK I++WD T +++ + + L+ + ++ +L D KI+ D+
Sbjct: 467 HFDKKIRFWDIRTESIVKELEL--LGRITALDLNSERTELLTCSRDDLLKII--DLRVGA 522
Query: 418 ITQEYDQH---LGAVNT-ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
+ Q + G+ T + F + S D +L VW + + +++ H +
Sbjct: 523 VKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPIN 582
Query: 474 SISLHPNTNWLAAQSLDNQILIYS 497
+++ P + + N+ +++S
Sbjct: 583 AVAWSPAGAHVVSVDKGNKAVLWS 606
>UNIPROTKB|E1BWN2 [details] [associations]
symbol:E1BWN2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0005912 "adherens junction"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA] [GO:0033365 "protein
localization to organelle" evidence=IEA] [GO:0060271 "cilium
morphogenesis" evidence=IEA] Pfam:PF00018 InterPro:IPR017986
InterPro:IPR001452 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PRINTS:PR00452 PROSITE:PS50002 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00326 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005911 SUPFAM:SSF50044 GO:GO:0005912
GO:GO:0033365 OMA:FKGIPIS GO:GO:0005932 GO:GO:0031513
GeneTree:ENSGT00530000063479 EMBL:AADN02025521 EMBL:AADN02025522
IPI:IPI00588508 Ensembl:ENSGALT00000022607 Uniprot:E1BWN2
Length = 1174
Score = 212 (79.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 82/322 (25%), Positives = 134/322 (41%)
Query: 246 GEHVEDKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFF 305
GE EEK Q + W P A C IP + + + G G IRF
Sbjct: 575 GEGSRKSCEVSSPEEKKEQLK-WSRLPGQA------CRIPNKHLFSLRGGDMGCFCIRFS 627
Query: 306 PKYGHLILS-AGMDT-KVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKN 363
L + AG + + ++++ SG+ +R + GH V D+ + D LTAS D
Sbjct: 628 HDGRTLAAACAGKNGYPITLYEI-PSGQFLREFYGHLNIVYDLCWSKDSQHLLTASSDGT 686
Query: 364 IKYW--DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEI--- 418
++ W +T+ ++ F Y K +P D ++++ G D I W+ N +EI
Sbjct: 687 VRMWKIETQVASAVKVFPHPSFVYTAKYHPVAD--SLVVTGCYDAVIRVWNANVEEIHGQ 744
Query: 419 -TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR-VWEFGIPV----------VIKYISE 466
QE D H +NT+ F D + S D L VW+ + + K I E
Sbjct: 745 LLQELDGHKSFINTLCF-DTEGLHMFSGDSSGLIIVWDTSVKGSSQCLFQHWRINKEIKE 803
Query: 467 PHMHSMP--SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVN- 523
+ P + +HPN L + D+ + I R + K++ G Y +++
Sbjct: 804 NDLRGTPINHLEVHPNGRRLLIHAKDSTLRITDLR----ILATKKYIG--ATNYREKIHS 857
Query: 524 -FSPDGRFVMSGDGEGKCWFWD 544
+P G F+ SG +GK + W+
Sbjct: 858 TLTPCGTFLFSGSEDGKAYVWN 879
>UNIPROTKB|F1P6A3 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 CTD:55884 KO:K10342 OMA:HHPQVPD
EMBL:AAEX03014719 RefSeq:XP_534697.2 ProteinModelPortal:F1P6A3
Ensembl:ENSCAFT00000015752 GeneID:477500 KEGG:cfa:477500
Uniprot:F1P6A3
Length = 406
Score = 204 (76.9 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 69/266 (25%), Positives = 127/266 (47%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P LIL+ G+ D ++KIW+V +G + GH VRD+SF G+ L +AS DK
Sbjct: 121 PDISCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 179
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 180 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 235
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI-----------SEPHM 469
+ + H +V + F ++ VT+S D ++ +W+ ++ + S+ H+
Sbjct: 236 KLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRLLHHTQLDPPMDDSDVHI 295
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 296 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKTPIAFAP-MTNGLCC--TFFPHGG 348
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 349 VIATGTRDGHVQFWT--APRVLSSLK 372
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 211
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 212 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 269
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
T E TQ + D H+ ++ ++ F T +DD+ LR+W +
Sbjct: 270 PYTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTP 329
Query: 461 IKY 463
I +
Sbjct: 330 IAF 332
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S P+ + L + S D + I+ +
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKH 188
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 189 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 244
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 245 VSCDFSP-DSALLVTASYDTNVIMWD 269
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 201 (75.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 73/307 (23%), Positives = 122/307 (39%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
I R T GH + A+ + L++SA D K+ IWD + + K + S V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWV 100
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTET--GQV-IRTFSTGKIPYVVKLNPDDDKQNILL 400
++ G D ++ +T G V + G Y+ DD Q +
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D WD+ T + T + H G V +++ + R FV+ + D S ++W+ +
Sbjct: 161 SG--DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGM 217
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+ H + +I PN N A S D ++ R +L +I+ G
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH--DNIICGIT- 274
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
V+FS GR +++G + C WD L H+ + C + VAT WD
Sbjct: 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-VSCLGVTDDGMAVATGSWD 333
Query: 581 GLIKYWD 587
+K W+
Sbjct: 334 SFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 201 (75.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 73/307 (23%), Positives = 122/307 (39%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
I R T GH + A+ + L++SA D K+ IWD + + K + S V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWV 100
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTET--GQV-IRTFSTGKIPYVVKLNPDDDKQNILL 400
++ G D ++ +T G V + G Y+ DD Q +
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D WD+ T + T + H G V +++ + R FV+ + D S ++W+ +
Sbjct: 161 SG--DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGM 217
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+ H + +I PN N A S D ++ R +L +I+ G
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH--DNIICGIT- 274
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
V+FS GR +++G + C WD L H+ + C + VAT WD
Sbjct: 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-VSCLGVTDDGMAVATGSWD 333
Query: 581 GLIKYWD 587
+K W+
Sbjct: 334 SFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 201 (75.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 73/307 (23%), Positives = 122/307 (39%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
I R T GH + A+ + L++SA D K+ IWD + + K + S V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWV 100
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTET--GQV-IRTFSTGKIPYVVKLNPDDDKQNILL 400
++ G D ++ +T G V + G Y+ DD Q +
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D WD+ T + T + H G V +++ + R FV+ + D S ++W+ +
Sbjct: 161 SG--DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGM 217
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+ H + +I PN N A S D ++ R +L +I+ G
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH--DNIICGIT- 274
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
V+FS GR +++G + C WD L H+ + C + VAT WD
Sbjct: 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-VSCLGVTDDGMAVATGSWD 333
Query: 581 GLIKYWD 587
+K W+
Sbjct: 334 SFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 201 (75.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 73/307 (23%), Positives = 122/307 (39%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
I R T GH + A+ + L++SA D K+ IWD + + K + S V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWV 100
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTET--GQV-IRTFSTGKIPYVVKLNPDDDKQNILL 400
++ G D ++ +T G V + G Y+ DD Q +
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D WD+ T + T + H G V +++ + R FV+ + D S ++W+ +
Sbjct: 161 SG--DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGM 217
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+ H + +I PN N A S D ++ R +L +I+ G
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH--DNIICGIT- 274
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
V+FS GR +++G + C WD L H+ + C + VAT WD
Sbjct: 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-VSCLGVTDDGMAVATGSWD 333
Query: 581 GLIKYWD 587
+K W+
Sbjct: 334 SFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 201 (75.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 73/307 (23%), Positives = 122/307 (39%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAV 343
I R T GH + A+ + L++SA D K+ IWD + + K + S V
Sbjct: 43 IQMRTRRTLRGHLAKIYAMHWGTD-SRLLVSASQDGKLIIWDSYTTNKVHAIPL-RSSWV 100
Query: 344 RDISFCNDGTKFLTASYDKNIKYWDTET--GQV-IRTFSTGKIPYVVKLNPDDDKQNILL 400
++ G D ++ +T G V + G Y+ DD Q +
Sbjct: 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS 160
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
+G D WD+ T + T + H G V +++ + R FV+ + D S ++W+ +
Sbjct: 161 SG--DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR-EGM 217
Query: 461 IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 520
+ H + +I PN N A S D ++ R +L +I+ G
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH--DNIICGIT- 274
Query: 521 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 580
V+FS GR +++G + C WD L H+ + C + VAT WD
Sbjct: 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR-VSCLGVTDDGMAVATGSWD 333
Query: 581 GLIKYWD 587
+K W+
Sbjct: 334 SFLKIWN 340
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 183 (69.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 49/140 (35%), Positives = 69/140 (49%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V + F PK G+++ S D V +WDV +G+ MR+ HS V I FC DGT
Sbjct: 304 GHHNYVYCLAFSPK-GNILASGSYDEAVFLWDV-RAGRLMRSLPAHSDPVSGIDFCRDGT 361
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 413
++ S D I+ WDT TGQ +RT P V + + + IL + D I WD
Sbjct: 362 LVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNL-DSCIRLWDY 420
Query: 414 --NTKEITQEYDQHLGAVNT 431
+ ++ + Y H VNT
Sbjct: 421 IAHPSKVKKTYQGH---VNT 437
Score = 124 (48.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 66/258 (25%), Positives = 98/258 (37%)
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 397
GHS+ + + +G +AS D + WD ETG I T G + V L D
Sbjct: 178 GHSQPIAQVRISPNGRWIASASADGTARIWDAETGAHIDTL-VGHMAGVSCLAWSPDS-G 235
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRF--VTSSDDKSLRVWEF 455
L G DK I WD IT E +G + + R S + V
Sbjct: 236 TLATGSDDKAIRLWD----RITAEPAHAVGTQDGDDDAERGRTHGGTRISGASGIGVGGG 291
Query: 456 GIPVVIKYISEP---HMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 512
G P + P H + + ++ P N LA+ S D + ++ R +L +
Sbjct: 292 GGPA--RGTRRPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAG-RLMRSLPAHS 348
Query: 513 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE---GVCIGCEWHPL 569
V+G ++F DG V+S +G WD + + RTL HE V C + P
Sbjct: 349 DPVSG----IDFCRDGTLVVSCSTDGLIRIWDTATGQCLRTL-VHEDNPAVTNVC-FSP- 401
Query: 570 EQSKVATCGWDGLIKYWD 587
+ D I+ WD
Sbjct: 402 NGRYILAFNLDSCIRLWD 419
Score = 115 (45.5 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH++ ++ +R P G I SA D +IWD +G + T +GH V +++ D
Sbjct: 178 GHSQPIAQVRISPN-GRWIASASADGTARIWDA-ETGAHIDTLVGHMAGVSCLAWSPDSG 235
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFST 380
T S DK I+ WD T + T
Sbjct: 236 TLATGSDDKAIRLWDRITAEPAHAVGT 262
Score = 110 (43.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 34/145 (23%), Positives = 65/145 (44%)
Query: 334 RTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDD 393
R +GH V ++F G + SYD+ + WD G+++R+ P V + D
Sbjct: 300 RPLLGHHNYVYCLAFSPKGNILASGSYDEAVFLWDVRAGRLMRSLPAHSDP-VSGI--DF 356
Query: 394 DKQNILLAGMSDKKIVQ-WDMNTKEITQEY-DQHLGAVNTITFVDNNRRFVTSSDDKSLR 451
+ L+ S +++ WD T + + + AV + F N R + + D +R
Sbjct: 357 CRDGTLVVSCSTDGLIRIWDTATGQCLRTLVHEDNPAVTNVCFSPNGRYILAFNLDSCIR 416
Query: 452 VWEF-GIPVVIKYISEPHMHSMPSI 475
+W++ P +K + H+++ SI
Sbjct: 417 LWDYIAHPSKVKKTYQGHVNTGFSI 441
Score = 71 (30.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 17/54 (31%), Positives = 25/54 (46%)
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 583
FV S +G WD KS +V + + H+GVC W + + + G D I
Sbjct: 488 FVASASEDGHIVLWDVKSKEVVQKIAAHDGVCF---WVDVVGDTMVSAGKDARI 538
Score = 43 (20.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 568 PLEQSKVATCGWDGLIKYWD 587
P +Q+ VA+ DG I WD
Sbjct: 483 PKQQAFVASASEDGHIVLWD 502
>UNIPROTKB|E1BY92 [details] [associations]
symbol:WSB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 EMBL:AADN02025704 IPI:IPI00685000
Ensembl:ENSGALT00000034682 ArrayExpress:E1BY92 Uniprot:E1BY92
Length = 420
Score = 204 (76.9 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 66/250 (26%), Positives = 120/250 (48%)
Query: 307 KYGH--LILSAGMDT-KVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDK 362
K+G L+L+ G++ ++KIWDV+ +GK + M H++ VRD++F DG+ L +AS DK
Sbjct: 135 KFGQDQLLLATGLNNGRIKIWDVY-TGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDK 193
Query: 363 NIKYWDT-ETGQVIRTFSTGKI-PYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G +++ + Y +PD +IL + + K + WDM+ + +
Sbjct: 194 TLRVWDLKDDGNMMKVLRGHQNWVYGCAFSPDS---SILCSVGASKAVFLWDMDKYSMIR 250
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN 480
+ + H V F + T+S D + VW+ I V+++ P + N
Sbjct: 251 KLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGAN 310
Query: 481 TNWLAAQSLDNQIL-IYSTRE----RF-QLNKKKRF-AGHIVAGYACQVNFSPDGRFVMS 533
W+ + S + L I S + RF +++++ + G C FS DG + +
Sbjct: 311 DRWVRSVSFSHDGLHIASLADDKMVRFWRIDEEYPVQVAPLNNGLCC--TFSTDGSVLAA 368
Query: 534 GDGEGKCWFW 543
G +G FW
Sbjct: 369 GQ-DGSVHFW 377
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 48/187 (25%), Positives = 80/187 (42%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
Y K L++ HT+ V + F P +++SA D +++WD+ + G M+ GH
Sbjct: 158 YTGKLLLNLMD-HTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNW 216
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVV-KLNPDDDKQNILLA 401
V +F D + + K + WD + +IR V + +PD LLA
Sbjct: 217 VYGCAFSPDSSILCSVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPD----GALLA 272
Query: 402 GMS-DKKIVQWDMNTKEITQEYDQHL----------GA----VNTITFVDNNRRFVTSSD 446
S D ++ WD I +E+ HL GA V +++F + + +D
Sbjct: 273 TASYDTRVYVWDPYIGVILREFG-HLFPPPTPIFAGGANDRWVRSVSFSHDGLHIASLAD 331
Query: 447 DKSLRVW 453
DK +R W
Sbjct: 332 DKMVRFW 338
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 184 (69.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+++ T GH + ++ F P YG + S DT +K+WD+ G C+ Y GHS+AVR +
Sbjct: 100 KILRTLMGHKANICSLDFHP-YGEFVASGSQDTNIKLWDIRRKG-CVFRYRGHSQAVRCL 157
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDD 393
F DG +A+ D +K WD G+++ F TG + VV+ +P++
Sbjct: 158 RFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVN-VVEFHPNE 205
Score = 178 (67.7 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 45/189 (23%), Positives = 82/189 (43%)
Query: 295 HTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTK 354
H VS++ G L+ + G D +V +W + N C+ + GH+ V +
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSI-NKPNCIMSLTGHTSPVESVRLNTPEEL 81
Query: 355 FLTASYDKNIKYWDTETGQVIRTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ S +I+ WD E +++RT K + +P + + +G D I WD+
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGE---FVASGSQDTNIKLWDI 138
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
K Y H AV + F + + +++DD ++++W+ K +SE H+ P
Sbjct: 139 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMMSEFPGHTGP 195
Query: 474 S--ISLHPN 480
+ HPN
Sbjct: 196 VNVVEFHPN 204
Score = 151 (58.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 42/173 (24%), Positives = 73/173 (42%)
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI 457
+L G D ++ W +N H V ++ V S S+RVW+
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEA 98
Query: 458 PVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAG 517
+++ + H ++ S+ HP ++A+ S D I ++ R + + R+ GH A
Sbjct: 99 AKILRTLMG-HKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVF---RYRGHSQA- 153
Query: 518 YACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLE 570
C + FSPDG+++ S + WD + K+ H G E+HP E
Sbjct: 154 VRC-LRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 205
>UNIPROTKB|P74598 [details] [associations]
symbol:sll1491 "Uncharacterized WD repeat-containing
protein sll1491" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S76794 RefSeq:NP_442894.1
RefSeq:YP_005652955.1 ProteinModelPortal:P74598 IntAct:P74598
GeneID:12255406 GeneID:952007 KEGG:syn:sll1491 KEGG:syy:SYNGTS_3002
PATRIC:23843592 OMA:KMPEQTI ProtClustDB:CLSK2301952 Uniprot:P74598
Length = 348
Score = 201 (75.8 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 58/233 (24%), Positives = 103/233 (44%)
Query: 313 LSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASY-DKNIKYWDTET 371
L+ D V + V G + T +GH+ V ++F DG ++ S D+ I+ W+ +
Sbjct: 118 LAIAADNNVDVRRV-RDGMRVETLVGHTDKVSGVAFSPDGETIVSVSGGDRTIRIWERAS 176
Query: 372 GQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNT 431
G +I+T + P + D Q I A D+ I WD NT E+ Q G +N
Sbjct: 177 GNLIQTLADNLGPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFING 236
Query: 432 ITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDN 491
+ + R+ V + + ++ W + + P + + +I++ PN W+A + +
Sbjct: 237 LAVTPDGRKLVGAVRN-FVKAWNLADAKELFSVRGPSLE-INTIAVSPNNRWVATANKEG 294
Query: 492 QILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 544
I+I+ Q+ + GH G+ + FSPDG + SG + WD
Sbjct: 295 TIMIFDLANGKQVTTLR---GH--QGWVLSLAFSPDGNTLYSGAEDKTVKIWD 342
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 55/214 (25%), Positives = 103/214 (48%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILS-AGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIS 347
V T GHT VS + F P G I+S +G D ++IW+ SG ++T + +
Sbjct: 137 VETLVGHTDKVSGVAFSPD-GETIVSVSGGDRTIRIWERA-SGNLIQTLADNLGPTTSVV 194
Query: 348 FCNDGTKFLTASY--DKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGM 403
F DG++F+T + D+ IK+WD T +++ T S + ++ + + PD K L G
Sbjct: 195 FTPDGSQFITGAIGQDRTIKFWDANTFELLGT-SPQQPGFINGLAVTPDGRK----LVGA 249
Query: 404 SDKKIVQWDM-NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 462
+ W++ + KE+ L +NTI NNR T++ + ++ +++ +
Sbjct: 250 VRNFVKAWNLADAKELFSVRGPSL-EINTIAVSPNNRWVATANKEGTIMIFDLANGKQVT 308
Query: 463 YISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
+ H + S++ P+ N L + + D + I+
Sbjct: 309 TL-RGHQGWVLSLAFSPDGNTLYSGAEDKTVKIW 341
>UNIPROTKB|F1RKG5 [details] [associations]
symbol:WSB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 OMA:HHPQVPD EMBL:CU468330
Ensembl:ENSSSCT00000010800 Uniprot:F1RKG5
Length = 404
Score = 203 (76.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 69/266 (25%), Positives = 127/266 (47%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P LIL+ G+ D ++KIW+V +G + GH VRD+SF G+ L +AS DK
Sbjct: 119 PDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 177
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 178 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 233
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI-----------SEPHM 469
+ + H +V + F ++ VT+S D ++ +W+ ++ + S+ H+
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSDVHI 293
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 294 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKTPIAFAP-MTNGLCC--TFFPHGG 346
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 347 VIATGTRDGHVQFWT--APRVLSSLK 370
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 209
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 210 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 267
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
T E TQ + D H+ ++ ++ F T +DD+ LR+W +
Sbjct: 268 PYTGERLRSLHHTQLSPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTP 327
Query: 461 IKY 463
I +
Sbjct: 328 IAF 330
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S P+ + L + S D + I+ +
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKH 186
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 187 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 242
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 243 VSCDFSP-DSALLVTASYDTNVIMWD 267
>UNIPROTKB|Q0V8J1 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 EMBL:BT026227 IPI:IPI00708559
RefSeq:NP_001068825.1 UniGene:Bt.109198 ProteinModelPortal:Q0V8J1
Ensembl:ENSBTAT00000009395 GeneID:508388 KEGG:bta:508388 CTD:55884
InParanoid:Q0V8J1 KO:K10342 OMA:HHPQVPD OrthoDB:EOG45DWPC
NextBio:20868498 Uniprot:Q0V8J1
Length = 406
Score = 203 (76.5 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 69/266 (25%), Positives = 127/266 (47%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P LIL+ G+ D ++KIW+V +G + GH VRD+SF G+ L +AS DK
Sbjct: 121 PDVSCLILATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 179
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 180 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 235
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI-----------SEPHM 469
+ + H +V + F ++ VT+S D ++ +W+ ++ + S+ H+
Sbjct: 236 KLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSDVHI 295
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 296 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKTPIAFAP-MTNGLCC--TFFPHGG 348
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 349 VIATGTRDGHVQFWT--APRVLSSLK 372
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 211
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 212 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 269
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
T E TQ + D H+ ++ ++ F T +DD+ LR+W +
Sbjct: 270 PYTGERLRSLHHTQLNPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTP 329
Query: 461 IKY 463
I +
Sbjct: 330 IAF 332
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S P+ + L + S D + I+ +
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKH 188
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 189 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 244
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 245 VSCDFSP-DSALLVTASYDTNVIMWD 269
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 205 (77.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 74/311 (23%), Positives = 133/311 (42%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
RL H GH + + +F P + + D +IWD +G T GH+ V +
Sbjct: 143 RLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDA-ETGTPKHTLKGHAGWVLGV 201
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDD---DKQNILLA 401
S+ DGT+ T S DK ++ WD ETG+ + + G +V + P D L++
Sbjct: 202 SWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVS 261
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFV--TSSDDKSLRVWEFGIPV 459
D W +NT H G+V+ + + N V T+S DK+++VW+ +
Sbjct: 262 ASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWD-AVKG 320
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSL-DNQILIYSTRERFQLNKKKRFAGHIVAGY 518
+ + + H H + ++L +T+++ D+ + +T E K+R+
Sbjct: 321 TLLHDLKSHAHWVNHLAL--STDFVCRTGFFDHTKTVPATAEEKTAKAKERYEK------ 372
Query: 519 ACQVNFSPDGRFVMSGDGEGKCWFWDWKS--CKVFRTLKCHEGVCIGCEWHPLEQSKVAT 576
A +V R V + D + + +D + K + H+ + P + S +A+
Sbjct: 373 AARVGGKIVERLVSASD-DFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSP-DGSMIAS 430
Query: 577 CGWDGLIKYWD 587
GWD K W+
Sbjct: 431 AGWDNATKLWN 441
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 40/118 (33%), Positives = 55/118 (46%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH K V+ + F P G +I SAG D K+W+ GK + T GH V SF D
Sbjct: 411 GHQKQVNHVTFSPD-GSMIASAGWDNATKLWNA-RDGKFINTLRGHVAPVYQCSFSADSR 468
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQW 411
+TAS D +K W+ TG+ + T G V ++ D Q + G DK + W
Sbjct: 469 LLVTASKDTTLKVWNVRTGK-LATDLPGHEDEVYGVDWSPDGQRVGSGGR-DKAVRLW 524
Score = 150 (57.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 38/154 (24%), Positives = 72/154 (46%)
Query: 301 AIRFFPKYGHLILSAGMDTKVKIWDVFNSG-KCMRTYMGHSKAVRDISFCNDGTKFLTAS 359
A R K ++SA D + ++D N G K + +GH K V ++F DG+ +A
Sbjct: 373 AARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAG 432
Query: 360 YDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEIT 419
+D K W+ G+ I T G + V + + D + +L+ D + W++ T ++
Sbjct: 433 WDNATKLWNARDGKFINTLR-GHVAPVYQCSFSADSR-LLVTASKDTTLKVWNVRTGKLA 490
Query: 420 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 453
+ H V + + + +R + DK++R+W
Sbjct: 491 TDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 34/150 (22%), Positives = 72/150 (48%)
Query: 440 RFVTSSDDKSLRVWE---FGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIY 496
R V++SDD ++ +++ G + + I H + ++ P+ + +A+ DN ++
Sbjct: 383 RLVSASDDFTMYLFDPLNDGTKPIARMIG--HQKQVNHVTFSPDGSMIASAGWDNATKLW 440
Query: 497 STRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKC 556
+ R+ +N + GH+ Y C +FS D R +++ + W+ ++ K+ L
Sbjct: 441 NARDGKFINTLR---GHVAPVYQC--SFSADSRLLVTASKDTTLKVWNVRTGKLATDLPG 495
Query: 557 HEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
HE G +W P + +V + G D ++ W
Sbjct: 496 HEDEVYGVDWSP-DGQRVGSGGRDKAVRLW 524
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 206 (77.6 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 71/295 (24%), Positives = 130/295 (44%)
Query: 284 IPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC--MRTYMGHSK 341
+P + + H V+A++F P L+ + GMD +VK+W+ F KC + G +
Sbjct: 310 VPTTASYVFDAHDGEVNAVQFSPG-SRLLATGGMDRRVKLWEAFGD-KCEFKGSLSGSNA 367
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFS--TGKIPYVVKLNPDDDKQNIL 399
+ I F + G L AS D + W + ++ T + +GK+ K D+ + +
Sbjct: 368 GITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKV-LSAKFLLDNAR---I 423
Query: 400 LAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPV 459
++G D+ + WD+ +K + + N I V + ++ DK +R W+
Sbjct: 424 VSGSHDRTLKLWDLRSKVCIKTVFAG-SSCNDI--VCTEQCVMSGHFDKKIRFWDIRSES 480
Query: 460 VIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 519
V++ + + + ++ L+P L + S D+ + + R K+ F+ G+
Sbjct: 481 VVREMEL--LGKITALDLNPERTELLSCSRDDLLKVIDLRTNAV---KQTFSA---PGFK 532
Query: 520 C-----QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL-KCHEGVCIGCEWHP 568
C +V FSPDG +V +G EG + W + KV + L K H W P
Sbjct: 533 CGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAP 587
Score = 182 (69.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 60/255 (23%), Positives = 110/255 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SG G+++I F G +L+A D +IW V + + T GHS V F D
Sbjct: 363 SGSNAGITSIEF-DSAGAYLLAASNDFASRIWTV-DDYRLRHTLTGHSGKVLSAKFLLDN 420
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ ++ S+D+ +K WD + I+T G N + +++G DKKI WD
Sbjct: 421 ARIVSGSHDRTLKLWDLRSKVCIKTVFAGS-----SCNDIVCTEQCVMSGHFDKKIRFWD 475
Query: 413 MNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH-- 470
+ ++ + +E + LG + + ++ S D L+V + V + S P
Sbjct: 476 IRSESVVREMEL-LGKITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCG 534
Query: 471 -SMPSISLHPNTNWLAAQSLDNQILIYSTRE-RFQLNKKKRFAGHIVAGYACQVNFSPDG 528
+ P+ +++AA S + + ++S + + K+ + I A V ++P G
Sbjct: 535 SDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINA-----VAWAPSG 589
Query: 529 RFVMSGDGEGKCWFW 543
V+S D + W
Sbjct: 590 LHVVSVDKGSRAVLW 604
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 205 (77.2 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 52/212 (24%), Positives = 104/212 (49%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH+ V F P +L LS+ D V++W + + C+ Y GH+ V D F G
Sbjct: 301 GHSGPVYGASFSPDRNYL-LSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQW 411
F++ +D+ + W T+ Q +R F+ G + V + +P+ N + G +D+ + W
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFA-GHLADVNCTRFHPNS---NYVATGSADRTVRLW 414
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ + + H G ++++TF N R T + D + +W+ G +++ + + H +
Sbjct: 415 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDT 473
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQ 503
+ S+ + LA+ S+DN + ++ + F+
Sbjct: 474 VCSLRFSRDGEILASGSMDNTVRLWDAVKAFE 505
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/135 (29%), Positives = 62/135 (45%)
Query: 278 ANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYM 337
A DH Y P R+ ++GH V+ RF P + + + D V++WDV N G C+R +
Sbjct: 373 ATDH-YQPLRI---FAGHLADVNCTRFHPNSNY-VATGSADRTVRLWDVLN-GNCVRIFT 426
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 397
GH + ++F +G T + D + WD G ++ G V L D +
Sbjct: 427 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGE- 484
Query: 398 ILLAGMSDKKIVQWD 412
IL +G D + WD
Sbjct: 485 ILASGSMDNTVRLWD 499
Score = 156 (60.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 59/257 (22%), Positives = 98/257 (38%)
Query: 333 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YVVKLNP 391
+R + K +R + D + S D + D +T ++ P Y +P
Sbjct: 254 VRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSP 313
Query: 392 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR 451
D +N LL+ D + W + T Y H V F FV+ D+ R
Sbjct: 314 D---RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVAR 370
Query: 452 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
+W ++ I H+ + HPN+N++A S D + ++ N + F
Sbjct: 371 LWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG---NCVRIFT 426
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 571
GH G + FSP+GRF+ +G +G+ WD + LK H C
Sbjct: 427 GH--KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV--CSLRFSRD 482
Query: 572 SKVATCG-WDGLIKYWD 587
++ G D ++ WD
Sbjct: 483 GEILASGSMDNTVRLWD 499
>UNIPROTKB|Q9NYS7 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567
GO:GO:0005622 HOGENOM:HOG000063727 HOVERGEN:HBG034543 CTD:55884
KO:K10342 EMBL:AF229181 EMBL:AF163324 EMBL:BC015887 IPI:IPI00941604
RefSeq:NP_061109.1 UniGene:Hs.506985 ProteinModelPortal:Q9NYS7
SMR:Q9NYS7 IntAct:Q9NYS7 MINT:MINT-1379403 STRING:Q9NYS7
PhosphoSite:Q9NYS7 DMDM:20532294 PRIDE:Q9NYS7 DNASU:55884
Ensembl:ENST00000315436 GeneID:55884 KEGG:hsa:55884 UCSC:uc001twr.2
GeneCards:GC12M118470 HGNC:HGNC:19222 neXtProt:NX_Q9NYS7
PharmGKB:PA128395787 InParanoid:Q9NYS7 PhylomeDB:Q9NYS7
GenomeRNAi:55884 NextBio:61208 ArrayExpress:Q9NYS7 Bgee:Q9NYS7
CleanEx:HS_WSB2 Genevestigator:Q9NYS7 GermOnline:ENSG00000176871
Uniprot:Q9NYS7
Length = 404
Score = 202 (76.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 68/266 (25%), Positives = 127/266 (47%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P L+L+ G+ D ++KIW+V +G + GH VRD+SF G+ L +AS DK
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 177
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 178 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 233
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI-----------SEPHM 469
+ + H +V + F ++ VT+S D ++ +W+ ++ + S+ H+
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHI 293
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 294 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKTPIAFAP-MTNGLCC--TFFPHGG 346
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 347 VIATGTRDGHVQFWT--APRVLSSLK 370
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 150 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 209
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 210 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 267
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
T E TQ + D H+ ++ ++ F T +DD+ LR+W +
Sbjct: 268 PYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTP 327
Query: 461 IKY 463
I +
Sbjct: 328 IAF 330
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S P+ + L + S D + I+ +
Sbjct: 128 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKH 186
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 187 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 242
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 243 VSCDFSP-DSALLVTASYDTNVIMWD 267
>UNIPROTKB|F5H280 [details] [associations]
symbol:WSB2 "WD repeat and SOCS box-containing protein 2"
species:9606 "Homo sapiens" [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HGNC:HGNC:19222 EMBL:AC131238 IPI:IPI01011081
ProteinModelPortal:F5H280 SMR:F5H280 Ensembl:ENST00000535496
ArrayExpress:F5H280 Bgee:F5H280 Uniprot:F5H280
Length = 406
Score = 202 (76.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 68/266 (25%), Positives = 127/266 (47%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P L+L+ G+ D ++KIW+V +G + GH VRD+SF G+ L +AS DK
Sbjct: 121 PDVSCLVLATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 179
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 180 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 235
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI-----------SEPHM 469
+ + H +V + F ++ VT+S D ++ +W+ ++ + S+ H+
Sbjct: 236 KLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHI 295
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 296 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKTPIAFAP-MTNGLCC--TFFPHGG 348
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 349 VIATGTRDGHVQFWT--APRVLSSLK 372
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 152 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 211
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 212 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 269
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
T E TQ + D H+ ++ ++ F T +DD+ LR+W +
Sbjct: 270 PYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTP 329
Query: 461 IKY 463
I +
Sbjct: 330 IAF 332
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S P+ + L + S D + I+ +
Sbjct: 130 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKH 188
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 189 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 244
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 245 VSCDFSP-DSALLVTASYDTNVIMWD 269
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 204 (76.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 70/305 (22%), Positives = 128/305 (41%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRT--------YMGHSKAVRD 345
G V +F P G +++ +D +++W+ F +GK + +M +AV
Sbjct: 212 GQKSHVECAQFSPD-GQYLITGSVDGFLEVWN-FTTGKVRKDLKYQAQDQFMMMEQAVLA 269
Query: 346 ISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSD 405
++F D + + D IK W TGQ +R F + L D +L A D
Sbjct: 270 LNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSASF-D 328
Query: 406 KKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYI 464
+ + + ++ +E+ H VN TF + +++S D +++VW V Y
Sbjct: 329 YTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTECVATYK 388
Query: 465 SEPHMHSMPSISLHP-NTNWLAAQSLDNQILIYSTRERF--QLNKKKRFAGHIVAGYACQ 521
+ ++ ++ + P N + N ++I + + + + KR G ++
Sbjct: 389 PLGNELAVNTVLILPKNPEHFIVCNRSNTVVIMNMQGQIVRSFSSGKREGGAFISA---- 444
Query: 522 VNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDG 581
SP G F+ + + + S K+ RTL HE IG HP Q+ +A+ DG
Sbjct: 445 -TLSPRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTHHP-HQNLLASYSEDG 502
Query: 582 LIKYW 586
L+K W
Sbjct: 503 LLKLW 507
>UNIPROTKB|B4DIE6 [details] [associations]
symbol:WSB2 "cDNA FLJ59692, highly similar to WD repeat and
SOCS box-containing protein 2" species:9606 "Homo sapiens"
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
EMBL:AC131159 HOGENOM:HOG000063727 HOVERGEN:HBG034543 OMA:HHPQVPD
UniGene:Hs.506985 HGNC:HGNC:19222 EMBL:AC131238 EMBL:AK295555
IPI:IPI00032828 SMR:B4DIE6 STRING:B4DIE6 Ensembl:ENST00000441406
Uniprot:B4DIE6
Length = 421
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 68/266 (25%), Positives = 127/266 (47%)
Query: 306 PKYGHLILSAGM-DTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFL-TASYDKN 363
P L+L+ G+ D ++KIW+V +G + GH VRD+SF G+ L +AS DK
Sbjct: 136 PDVSCLVLATGLNDGQIKIWEV-QTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKT 194
Query: 364 IKYWD-TETGQVIRTFSTGKIPYVV--KLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQ 420
++ WD + G+ I+ S G + +V ++PD ++L + +K + W M + + +
Sbjct: 195 LRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDC---SMLCSAAGEKSVFLWSMRSYTLIR 250
Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI-----------SEPHM 469
+ + H +V + F ++ VT+S D ++ +W+ ++ + S+ H+
Sbjct: 251 KLEGHQSSVVSCDFSPDSALLVTASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHI 310
Query: 470 HSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGR 529
S+ S+ P +LA + D + I++ +L FA + G C F P G
Sbjct: 311 SSLRSVCFSPEGLYLATVADDRLLRIWA----LELKTPIAFAP-MTNGLCC--TFFPHGG 363
Query: 530 FVMSGDGEGKCWFWDWKSCKVFRTLK 555
+ +G +G FW + +V +LK
Sbjct: 364 VIATGTRDGHVQFWT--APRVLSSLK 387
Score = 155 (59.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 46/183 (25%), Positives = 80/183 (43%)
Query: 293 SGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDG 352
SGH V + F P +++SA D ++IWD+ GK ++ GH + V S D
Sbjct: 167 SGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDC 226
Query: 353 TKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 412
+ +A+ +K++ W + +IR G VV + D +L+ D ++ WD
Sbjct: 227 SMLCSAAGEKSVFLWSMRSYTLIRKLE-GHQSSVVSCDFSPDSA-LLVTASYDTNVIMWD 284
Query: 413 MNTKEI------TQ------EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV 460
T E TQ + D H+ ++ ++ F T +DD+ LR+W +
Sbjct: 285 PYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIWALELKTP 344
Query: 461 IKY 463
I +
Sbjct: 345 IAF 347
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 33/146 (22%), Positives = 69/146 (47%)
Query: 443 TSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNW-LAAQSLDNQILIYSTRER 501
T +D +++WE +++ +S H + +S P+ + L + S D + I+ +
Sbjct: 145 TGLNDGQIKIWEVQTGLLLLNLSG-HQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKH 203
Query: 502 FQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVC 561
+ + + +GH+ Y C + SPD + S GE + W +S + R L+ H+
Sbjct: 204 GK--QIQVLSGHLQWVYCCSI--SPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSV 259
Query: 562 IGCEWHPLEQSKVATCGWDGLIKYWD 587
+ C++ P + + + T +D + WD
Sbjct: 260 VSCDFSP-DSALLVTASYDTNVIMWD 284
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 198 (74.8 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 71/270 (26%), Positives = 112/270 (41%)
Query: 331 KCMRTYMGHSKAVRDISFC--NDGTKFLTASYDKNIKYWDTET---------GQVIRTFS 379
K T GH+ V I+ ND T L++S DK I WD ++ G+ +R+
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL- 65
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
TG +V + D Q L+G DK + WD+N T+++ H V ++ F +NR
Sbjct: 66 TGHNHFVSDVVISSDGQ-FALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN--WLAAQSLDNQILIYS 497
+ V+ S DKS+++W + H + ++ P+ + + D + +++
Sbjct: 125 QIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN 184
Query: 498 TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
K GH GY V SPDG SG +G+ WD K TL +
Sbjct: 185 LGN---CRLKTNHIGH--TGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ V + P A G IK WD
Sbjct: 240 D-VINAMSFSPNRYWLCAAVG--SSIKIWD 266
Score = 196 (74.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 73/282 (25%), Positives = 128/282 (45%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHL-ILSAGMDTKVKIWDVFNS--------GKCMRTYM 337
+L T GHT V+ I + + +LS+ D + +WDV + G+ +R+
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQ 396
GH+ V D+ +DG L+ S+DK ++ WD G R F S K V + D+ +Q
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN-RQ 125
Query: 397 NILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVDNNRR--FVTSSDDKSLRVW 453
+++G DK I W+ + + T D H V+T+ F +NR V++ DK ++VW
Sbjct: 126 --IVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVW 183
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
G +K H + ++++ P+ + A+ D Q +++ E L G+
Sbjct: 184 NLG-NCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT---LPGN 239
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
V ++FSP+ ++ + G WD + K LK
Sbjct: 240 DVIN---AMSFSPNRYWLCAAVGSS-IKIWDLEDKKEIEELK 277
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 198 (74.8 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 71/270 (26%), Positives = 112/270 (41%)
Query: 331 KCMRTYMGHSKAVRDISFC--NDGTKFLTASYDKNIKYWDTET---------GQVIRTFS 379
K T GH+ V I+ ND T L++S DK I WD ++ G+ +R+
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL- 65
Query: 380 TGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNR 439
TG +V + D Q L+G DK + WD+N T+++ H V ++ F +NR
Sbjct: 66 TGHNHFVSDVVISSDGQ-FALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNR 124
Query: 440 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTN--WLAAQSLDNQILIYS 497
+ V+ S DKS+++W + H + ++ P+ + + D + +++
Sbjct: 125 QIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN 184
Query: 498 TRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH 557
K GH GY V SPDG SG +G+ WD K TL +
Sbjct: 185 LGN---CRLKTNHIGH--TGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Query: 558 EGVCIGCEWHPLEQSKVATCGWDGLIKYWD 587
+ V + P A G IK WD
Sbjct: 240 D-VINAMSFSPNRYWLCAAVG--SSIKIWD 266
Score = 196 (74.1 bits), Expect = 6.5e-13, P = 6.5e-13
Identities = 73/282 (25%), Positives = 128/282 (45%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHL-ILSAGMDTKVKIWDVFNS--------GKCMRTYM 337
+L T GHT V+ I + + +LS+ D + +WDV + G+ +R+
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTF-STGKIPYVVKLNPDDDKQ 396
GH+ V D+ +DG L+ S+DK ++ WD G R F S K V + D+ +Q
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADN-RQ 125
Query: 397 NILLAGMSDKKIVQWDMNTK-EITQEYDQHLGAVNTITFVDNNRR--FVTSSDDKSLRVW 453
+++G DK I W+ + + T D H V+T+ F +NR V++ DK ++VW
Sbjct: 126 --IVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVW 183
Query: 454 EFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 513
G +K H + ++++ P+ + A+ D Q +++ E L G+
Sbjct: 184 NLG-NCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT---LPGN 239
Query: 514 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLK 555
V ++FSP+ ++ + G WD + K LK
Sbjct: 240 DVIN---AMSFSPNRYWLCAAVGSS-IKIWDLEDKKEIEELK 277
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 197 (74.4 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 48/166 (28%), Positives = 84/166 (50%)
Query: 289 VHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISF 348
+ + GH GV ++F Y L+ + D+ + IWD+F +GK +R GHS V+ + F
Sbjct: 295 IQEFKGHMDGVLTLQF--NY-RLLFTGSYDSTIGIWDLF-TGKLIRRLSGHSDGVKTLYF 350
Query: 349 CNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKI 408
D K +T S DK I+ W+ TG+ I T+ G V+ + D Q ++++G +DK +
Sbjct: 351 --DDRKLITGSLDKTIRVWNYITGECISTYR-GHSDSVLSV---DSYQKVIVSGSADKTV 404
Query: 409 VQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 454
W + ++ H VN + + + SDD ++R+W+
Sbjct: 405 KVWHVESRTC-YTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWD 449
Score = 159 (61.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 70/279 (25%), Positives = 121/279 (43%)
Query: 287 RLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDI 346
+L+ SGH+ GV + F + +++ +D +++W+ + +G+C+ TY GHS +V +
Sbjct: 333 KLIRRLSGHSDGVKTLYFDDRK---LITGSLDKTIRVWN-YITGECISTYRGHSDSV--L 386
Query: 347 SFCNDGTKFLTASYDKNIKYWDTETGQVIRTFST--GKIPYV--VKLNPDDDKQNILLAG 402
S + ++ S DK +K W E+ RT T G +V VKL+P K +
Sbjct: 387 SVDSYQKVIVSGSADKTVKVWHVES----RTCYTLRGHTEWVNCVKLHP---KSFSCFSC 439
Query: 403 MSDKKIVQWDMNTKEITQEYDQHLGAVNTI---TFVD-NNRRFVTSSDDKSLRVWEFGIP 458
D I WD+ T + + H+G V I T D N +SD S + P
Sbjct: 440 SDDTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLTIKDVENLATDNTSDGSSPQ----DDP 495
Query: 459 VVIKYISEPHMHSMPSISLH----PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI 514
+ E S ++ P L + LDN I ++ + + + +F GH+
Sbjct: 496 TMTDGADESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCI--RTQF-GHV 552
Query: 515 VAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRT 553
+ + + D ++SG +G WD +S K T
Sbjct: 553 EGVW----DIAADNFRIISGSHDGSIKVWDLQSGKCMHT 587
Score = 155 (59.6 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 30/70 (42%), Positives = 47/70 (67%)
Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDT 369
HL LS G+D +K+WDV +GKC+RT GH + V DI+ D + ++ S+D +IK WD
Sbjct: 524 HL-LSCGLDNTIKLWDV-KTGKCIRTQFGHVEGVWDIAA--DNFRIISGSHDGSIKVWDL 579
Query: 370 ETGQVIRTFS 379
++G+ + TF+
Sbjct: 580 QSGKCMHTFN 589
Score = 131 (51.2 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 45/178 (25%), Positives = 74/178 (41%)
Query: 283 YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKA 342
YI + T+ GH+ V ++ + K +I+S D VK+W V S C T GH++
Sbjct: 369 YITGECISTYRGHSDSVLSVDSYQK---VIVSGSADKTVKVWHV-ESRTCY-TLRGHTEW 423
Query: 343 VRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNP--DDDKQNILL 400
V + + S D I+ WD T ++ F G + V K+ P D +N+
Sbjct: 424 VNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFR-GHVGQVQKIIPLTIKDVENLAT 482
Query: 401 AGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS----SDDKSLRVWE 454
SD Q D + E D T+ +D N + T D ++++W+
Sbjct: 483 DNTSDGSSPQDDPTMTDGADESDTPSNEQETV--LDENIPYPTHLLSCGLDNTIKLWD 538
Score = 54 (24.1 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 543 WDWKSCKVFRTLKCH-EGVCIGCEWH-PLEQSKVATCGWDGLIKYWD 587
WD K+ K RT H EGV W + ++ + DG IK WD
Sbjct: 537 WDVKTGKCIRTQFGHVEGV-----WDIAADNFRIISGSHDGSIKVWD 578
Score = 44 (20.5 bits), Expect = 3.9e-12, Sum P(3) = 3.9e-12
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 576 TCGWDGLIKYWD 587
+CG D IK WD
Sbjct: 527 SCGLDNTIKLWD 538
Score = 41 (19.5 bits), Expect = 3.7e-13, Sum P(3) = 3.7e-13
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 4 LQNYADEKEDELDKPENQNDQNPDSAALESSPP 36
+ ++ D+ +D+LD + N A+ PP
Sbjct: 8 MMSFEDKDKDDLDNSNSNNSSEMTDTAM--MPP 38
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 155 (59.6 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFS 525
E H + S+S + +L A DN+I +Y+T R + F+G + + + S
Sbjct: 289 EKRSHGIVSLSQDSSGTYLTASCKDNRIYLYNTL-RLDKGPVQSFSGCRIDSFFVRTMIS 347
Query: 526 PDGRFVMSGDGEGKCWFWDWKSCKVFRT-LKCHEGVCIGCEWHPLEQSKVATCGWDGLIK 584
PDG +V+SG +G + W +V LK H+ +W P E KVAT D ++
Sbjct: 348 PDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVR 407
Query: 585 YWD 587
W+
Sbjct: 408 LWN 410
Score = 97 (39.2 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 26/90 (28%), Positives = 40/90 (44%)
Query: 328 NSGKC-MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV 386
N+ K R ++ H A+ DIS+ + LTAS D+ IK WD E + G V
Sbjct: 115 NTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVL-IGHTGTV 173
Query: 387 VKLNPDDDKQNILLAGMSDKKIVQWDMNTK 416
+ ++L++G D WD+ K
Sbjct: 174 KSMCSHPTNSDLLVSGSRDGCFALWDLRCK 203
Score = 87 (35.7 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 27/99 (27%), Positives = 40/99 (40%)
Query: 273 KDAKAANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKC 332
K A +A K W H + I + K +L+A D +K+WDV KC
Sbjct: 105 KFASSATHQENTEKARFRDWIAHYNAIFDISWI-KGDSCLLTASGDQTIKVWDV-EENKC 162
Query: 333 MRTYMGHSKAVRDISFCNDGTK---FLTASYDKNIKYWD 368
+GH+ V+ S C+ T ++ S D WD
Sbjct: 163 TGVLIGHTGTVK--SMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 47 (21.6 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDV 326
GHT V ++ P L++S D +WD+
Sbjct: 168 GHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 199 (75.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 79/353 (22%), Positives = 134/353 (37%)
Query: 240 NAGGEKGEHVEDKSTFHGKEEKDYQGRSWVAPPKDAKAANDHCYIPKRLVHTWSGHTKGV 299
NA + V + K E++ Q + V A+ Y+ + GH V
Sbjct: 14 NATEKMASLVREAENLKTKLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKGHQAKV 73
Query: 300 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAS 359
+ P H+I S+ D ++ IWD F + K M + + ++ G
Sbjct: 74 LCTDWSPDKRHII-SSSQDGRLIIWDAFTTNKEHAVTMP-TTWIMACAYAPSGNFVACGG 131
Query: 360 YDKNIKYW----DTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNT 415
D + + D E RT T + P+ D+Q +L G D WD+ +
Sbjct: 132 LDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQ--ILTGSGDSTCALWDVES 189
Query: 416 KEITQEYDQHLGAVNTITFVDNN--RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
++ Q + H G V I N FV+ S D+ +W+ V++ E H +
Sbjct: 190 GQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSF-EGHQSDVN 248
Query: 474 SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 533
S+ HP + +A S D+ +Y R ++ FA + V+FS GR + +
Sbjct: 249 SVKFHPCGDAIATGSDDSSCRLYDMRADREVAV---FAKESIIFGVNSVDFSVSGRLLFA 305
Query: 534 GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 586
G + WD + L HE + C + + ++T WD I+ W
Sbjct: 306 GYNDYTVNLWDTLKSERVCLLYGHENK-VSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 134 (52.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 43/204 (21%), Positives = 92/204 (45%)
Query: 388 KLNPDDDKQN-ILLAGMSDK--KIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTS 444
KL + K N + L+ ++++ +I ++ +++ + H V + + R ++S
Sbjct: 32 KLEEERQKLNDVNLSNIAERLEQIAYVNIKPRKVLKG---HQAKVLCTDWSPDKRHIISS 88
Query: 445 SDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQL 504
S D L +W+ ++ P M + + P+ N++A LDN++ +Y ++
Sbjct: 89 SQDGRLIIWDAFTTNKEHAVTMPTTWIM-ACAYAPSGNFVACGGLDNKVTVYPITSDEEM 147
Query: 505 NKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC 564
KKR G + +C + + D + +++G G+ C WD +S ++ ++ H G +
Sbjct: 148 AAKKRTVGTHTSYMSCCIYPNSDQQ-ILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAI 206
Query: 565 EWHPLEQSKVATCG-WDGLIKYWD 587
+ P E G D + WD
Sbjct: 207 DLAPNETGNTFVSGSCDRMAFIWD 230
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 196 (74.1 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 68/280 (24%), Positives = 123/280 (43%)
Query: 299 VSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTA 358
V A+R+ G LS G D K+K+W+ SG ++TY GH+ V D + D + ++A
Sbjct: 20 VRAVRYNVD-GTYCLSCGSDKKIKLWNPA-SGLLLKTYGGHADEVTDAAGSCDSSYIVSA 77
Query: 359 SYDKNIKYWDTETGQVIRTFST--GKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTK 416
S DK+I YWD TG +R + G + V N D +I ++G D ++ WD+ T+
Sbjct: 78 SLDKSIIYWDVSTGAPVRRLRSHAGGVRCVC-FNEDS---SIAISGGRDNAVMCWDIRTR 133
Query: 417 EI--TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGI-PVVIKYISEPHMHSMP 473
+ Q + + T+ N R +S D +R ++ + + I EP +
Sbjct: 134 RLDPVQVMKEARDCITTVA--TNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITY--- 188
Query: 474 SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 533
++ + L A D+ + + L++ + GH Y + + +++
Sbjct: 189 -LAQTRDEQCLVAGCQDSVVRLLDCETGGLLSE---YRGHRGDDYHIECGILSNDAQIVT 244
Query: 534 GDGEGKCWFWDWKSCKVFRTLKCHE--GVCIGCEWHPLEQ 571
G +G + +D KV + ++ + GV HP Q
Sbjct: 245 GSSDGDAFVYDLLDGKVLQRIRISDNGGVVHSLATHPKRQ 284
Score = 142 (55.0 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 40/160 (25%), Positives = 74/160 (46%)
Query: 342 AVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLA 401
AVR + + DGT L+ DK IK W+ +G +++T+ G V D I+ A
Sbjct: 19 AVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYG-GHADEVTDAAGSCDSSYIVSA 77
Query: 402 GMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVV- 460
+ DK I+ WD++T + H G V + F +++ ++ D ++ W+ +
Sbjct: 78 SL-DKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLD 136
Query: 461 -IKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTR 499
++ + E + +++ N N + A SLD + Y R
Sbjct: 137 PVQVMKEAR-DCITTVAT--NENRIYAASLDGCVRTYDIR 173
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 206 (77.6 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 56/226 (24%), Positives = 109/226 (48%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH+ V F P +L LS+ D V++W + + C+ Y GH+ V D F G
Sbjct: 539 GHSGPVYGASFSPDRNYL-LSSSEDGTVRLWSL-QTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYV--VKLNPDDDKQNILLAGMSDKKIVQW 411
F++ +D+ + W T+ Q +R F+ G + V + +P+ N + G +D+ + W
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFA-GHLADVNCTRFHPNS---NYVATGSADRTVRLW 652
Query: 412 DMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHS 471
D+ + + H G ++++TF N R T + D + +W+ G +++ + + H +
Sbjct: 653 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-KGHTDT 711
Query: 472 MPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA---GHI 514
+ S+ + LA+ S+DN + ++ + F+ + F GHI
Sbjct: 712 VCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHI 757
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 45/165 (27%), Positives = 71/165 (43%)
Query: 278 ANDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYM 337
A DH Y P R+ ++GH V+ RF P + + + D V++WDV N G C+R +
Sbjct: 611 ATDH-YQPLRI---FAGHLADVNCTRFHPNSNY-VATGSADRTVRLWDVLN-GNCVRIFT 664
Query: 338 GHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQN 397
GH + ++F +G T + D + WD G ++ G V L D +
Sbjct: 665 GHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGE- 722
Query: 398 ILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFV 442
IL +G D + WD E D A I +N++ +
Sbjct: 723 ILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELL 767
Score = 159 (61.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 59/257 (22%), Positives = 99/257 (38%)
Query: 333 MRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVIRTFSTGKIP-YVVKLNP 391
+R + K +R + +D + S D + D +T ++ P Y +P
Sbjct: 492 VRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSP 551
Query: 392 DDDKQNILLAGMSDKKIVQWDMNTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLR 451
D +N LL+ D + W + T Y H V F FV+ D+ R
Sbjct: 552 D---RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVAR 608
Query: 452 VWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFA 511
+W ++ I H+ + HPN+N++A S D + ++ N + F
Sbjct: 609 LWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG---NCVRIFT 664
Query: 512 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQ 571
GH G + FSP+GRF+ +G +G+ WD + LK H C
Sbjct: 665 GH--KGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTV--CSLRFSRD 720
Query: 572 SKVATCG-WDGLIKYWD 587
++ G D ++ WD
Sbjct: 721 GEILASGSMDNTVRLWD 737
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 198 (74.8 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 65/293 (22%), Positives = 121/293 (41%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GHT V RF P G S GMD ++ +W+VF K G A+ D+ + D
Sbjct: 48 GHTAEVLVARFDPS-GSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSR 106
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 413
+S D ++ WD +GQ IR G V L+ +L + D + WD
Sbjct: 107 VVYCSSSDTHLMSWDAVSGQKIRKHK-GHAGVVNALDVLKVGSELLTSVSDDCTMKVWDS 165
Query: 414 NTKEITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 473
+K+ + ++ + + + D ++++W+ ++ + H +
Sbjct: 166 RSKDCIKTIEEKY-PLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHC-SHVLKGHKDIIT 223
Query: 474 SISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKR-FAG--HIVAGYACQVNFSPDGRF 530
S+++ + + L + S+DN + I+ + ++ + F G H V +S + RF
Sbjct: 224 SLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRF 283
Query: 531 VMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLI 583
V +G + + W + + L HEG ++HP Q + +C D I
Sbjct: 284 VGAGSSDKNVYVWS-ATGDLRYVLPGHEGSVNHVDFHP-HQDIILSCSSDRTI 334
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 49/210 (23%), Positives = 81/210 (38%)
Query: 294 GHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGT 353
GH V+A+ L+ S D +K+WD S C++T + + ++ GT
Sbjct: 133 GHAGVVNALDVLKVGSELLTSVSDDCTMKVWDS-RSKDCIKT-IEEKYPLTAVAIAQQGT 190
Query: 354 KFLTASYDKNIKYWDTETGQVIRTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 413
+ D IK WD G + L D ++L M D + +D+
Sbjct: 191 QVFIGGIDGAIKIWDLRNNHCSHVLK-GHKDIITSLAISKDGSSLLSNSM-DNTVRIFDV 248
Query: 414 NTKEITQEYDQHL-GAV-----NTITFV-DNNRRFV-TSSDDKSLRVWEFGIPVVIKYIS 465
Q Q GA+ N + N RFV S DK++ VW ++Y+
Sbjct: 249 KPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVWS--ATGDLRYVL 306
Query: 466 EPHMHSMPSISLHPNTNWLAAQSLDNQILI 495
H S+ + HP+ + + + S D I +
Sbjct: 307 PGHEGSVNHVDFHPHQDIILSCSSDRTIFL 336
WARNING: HSPs involving 1150 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 587 557 0.00098 119 3 11 22 0.43 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1400
No. of states in DFA: 631 (67 KB)
Total size of DFA: 383 KB (2186 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.82u 0.12s 50.94t Elapsed: 00:00:02
Total cpu time: 50.98u 0.13s 51.11t Elapsed: 00:00:02
Start: Fri May 10 23:46:02 2013 End: Fri May 10 23:46:04 2013
WARNINGS ISSUED: 2