BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007857
(587 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ST8|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus
pdb|2ADD|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Sucrose
pdb|2ADE|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With Fructose
pdb|2AEY|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia From
Cichorium Intybus In Complex With 2,5
Dideoxy-2,5-Immino-D-Mannitol
Length = 543
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/538 (57%), Positives = 395/538 (73%), Gaps = 5/538 (0%)
Query: 52 QPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWI 111
QPY T YHF+PP NW+NDPNGPM Y+GVYH FYQYNP FGD +IW H+VSYDL+NWI
Sbjct: 5 QPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWI 64
Query: 112 HLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKD 171
HL A+ P+ D SCWSGS TILPG+ P +LYTG D+ +QVQ+LA P+NLSDP L++
Sbjct: 65 HLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLRE 124
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHW 231
WVK NP++TPP GVKDD FRDP+TAW PDG WR++VGG DN GMAF+Y S DF++W
Sbjct: 125 WVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNW 184
Query: 232 TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291
+ D PL S TG WECPD +PV +N T G+DTSV V+HV+K + HD+Y +G
Sbjct: 185 KRYDQPLSSADATGTWECPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTIG 242
Query: 292 TYDPQMDIFSPDTDFH--GNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDD 349
TY P + F P G++ DLRYDYG+FYASK+FFD AKNRRVLWAW E+DS DD
Sbjct: 243 TYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADD 302
Query: 350 IDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITA 409
I+KGW+G+Q+ PRA+W+D++GKQL+QWPVEEIE LR QV++ +K L GS++E+ GI A
Sbjct: 303 IEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAA 362
Query: 410 SQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTA 469
SQ DV I VDPQ LCN++ AS +G GPFGLL +A++DL E++A
Sbjct: 363 SQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQSA 422
Query: 470 IFFRIFKGQ-NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVE 528
IFFR+F+ Q +Y VLMCSD SRS+++ ++D T+YGAFVDIDP ++SLR+L+DHSI+E
Sbjct: 423 IFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSIIE 482
Query: 529 SFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEESFK 586
SF A GKTCIT+R+YPK EAHLF FNNGTQ+V IS ++AW+M A+ ++S K
Sbjct: 483 SFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFVVDQSVK 540
>pdb|2AEZ|A Chain A, Crystal Structure Of Fructan 1-Exohydrolase Iia (E201q)
From Cichorium Intybus In Complex With 1-Kestose
Length = 543
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/538 (57%), Positives = 395/538 (73%), Gaps = 5/538 (0%)
Query: 52 QPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWI 111
QPY T YHF+PP NW+NDPNGPM Y+GVYH FYQYNP FGD +IW H+VSYDL+NWI
Sbjct: 5 QPYRTGYHFQPPSNWMNDPNGPMLYQGVYHFFYQYNPYAATFGDVIIWGHAVSYDLVNWI 64
Query: 112 HLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKD 171
HL A+ P+ D SCWSGS TILPG+ P +LYTG D+ +QVQ+LA P+NLSDP L++
Sbjct: 65 HLDPAIYPTQEADSKSCWSGSATILPGNIPAMLYTGSDSKSRQVQDLAWPKNLSDPFLRE 124
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHW 231
WVK NP++TPP GVKDD FRDP+TAW PDG WR++VGG DN GMAF+Y S DF++W
Sbjct: 125 WVKHPKNPLITPPEGVKDDCFRDPSTAWLGPDGVWRIVVGGDRDNNGMAFLYQSTDFVNW 184
Query: 232 TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291
+ D PL S TG W+CPD +PV +N T G+DTSV V+HV+K + HD+Y +G
Sbjct: 185 KRYDQPLSSADATGTWQCPDFYPVPLNSTNGLDTSVYGGSVRHVMKAGF--EGHDWYTIG 242
Query: 292 TYDPQMDIFSPDTDFH--GNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDD 349
TY P + F P G++ DLRYDYG+FYASK+FFD AKNRRVLWAW E+DS DD
Sbjct: 243 TYSPDRENFLPQNGLSLTGSTLDLRYDYGQFYASKSFFDDAKNRRVLWAWVPETDSQADD 302
Query: 350 IDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITA 409
I+KGW+G+Q+ PRA+W+D++GKQL+QWPVEEIE LR QV++ +K L GS++E+ GI A
Sbjct: 303 IEKGWAGLQSFPRALWIDRNGKQLIQWPVEEIEELRQNQVNLQNKNLKPGSVLEIHGIAA 362
Query: 410 SQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTA 469
SQ DV I VDPQ LCN++ AS +G GPFGLL +A++DL E++A
Sbjct: 363 SQADVTISFKLEGLKEAEVLDTTLVDPQALCNERGASSRGALGPFGLLAMASKDLKEQSA 422
Query: 470 IFFRIFKGQ-NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVE 528
IFFR+F+ Q +Y VLMCSD SRS+++ ++D T+YGAFVDIDP ++SLR+L+DHSI+E
Sbjct: 423 IFFRVFQNQLGRYSVLMCSDLSRSTVRSNIDTTSYGAFVDIDPRSEEISLRNLIDHSIIE 482
Query: 529 SFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLSEEESFK 586
SF A GKTCIT+R+YPK EAHLF FNNGTQ+V IS ++AW+M A+ ++S K
Sbjct: 483 SFGAGGKTCITSRIYPKFVNNEEAHLFVFNNGTQNVKISEMSAWSMKNAKFVVDQSVK 540
>pdb|2AC1|A Chain A, Crystal Structure Of A Cell-Wall Invertase From
Arabidopsis Thaliana
Length = 541
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/543 (57%), Positives = 392/543 (72%), Gaps = 11/543 (2%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD 106
S NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S D
Sbjct: 1 SPSVNQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTD 59
Query: 107 LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSD 166
LINW A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSD
Sbjct: 60 LINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSD 119
Query: 167 PLLKDWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYW 224
P L++W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y
Sbjct: 120 PYLREWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYT 179
Query: 225 SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLF 281
S DF+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL
Sbjct: 180 SKDFLKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLD 239
Query: 282 SDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWAN 341
KHDYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W N
Sbjct: 240 DTKHDYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTN 299
Query: 342 ESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGS 400
ES S +DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS
Sbjct: 300 ESSSVEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGS 359
Query: 401 IVEVSGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILA 460
+EV G+TA+Q DVE+ W DPQ +C+ N S++ GPFGL++LA
Sbjct: 360 RLEVYGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLA 419
Query: 461 TEDLTEKTAIFFRIFKGQ---NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVS 517
+++L E T+++FRIFK + NKYVVLMCSD SRSSLKED DKTTYGAFVDI+PH +S
Sbjct: 420 SKNLEEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQ-PLS 478
Query: 518 LRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577
LR+L+DHS+VESF +G+ CIT+RVYPK+A+ +HLFAFN G QSV + +LNAW+MN A
Sbjct: 479 LRALIDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSA 538
Query: 578 RLS 580
++S
Sbjct: 539 QIS 541
>pdb|2XQR|A Chain A, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|C Chain C, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|E Chain E, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|G Chain G, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|I Chain I, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
pdb|2XQR|K Chain K, Crystal Structure Of Plant Cell Wall Invertase In Complex
With A Specific Protein Inhibitor
Length = 537
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/539 (57%), Positives = 391/539 (72%), Gaps = 11/539 (2%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGSIVEV 404
+DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS +EV
Sbjct: 300 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEV 359
Query: 405 SGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDL 464
G+TA+Q DVE+ W DPQ +C+ N S++ GPFGL++LA+++L
Sbjct: 360 YGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNL 419
Query: 465 TEKTAIFFRIFKGQ---NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSL 521
E T+++FRIFK + NKYVVLMCSD SRSSLKED DKTTYGAFVDI+PH +SLR+L
Sbjct: 420 EEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQ-PLSLRAL 478
Query: 522 VDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
+DHS+VESF +G+ CIT+RVYPK+A+ +HLFAFN G QSV + +LNAW+MN A++S
Sbjct: 479 IDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|2QQU|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D239a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 535
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/537 (57%), Positives = 389/537 (72%), Gaps = 11/537 (2%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLADTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGSIVEV 404
+DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS +EV
Sbjct: 300 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEV 359
Query: 405 SGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDL 464
G+TA+Q DVE+ W DPQ +C+ N S++ GPFGL++LA+++L
Sbjct: 360 YGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNL 419
Query: 465 TEKTAIFFRIFKGQ---NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSL 521
E T+++FRIFK + NKYVVLMCSD SRSSLKED DKTTYGAFVDI+PH +SLR+L
Sbjct: 420 EEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQ-PLSLRAL 478
Query: 522 VDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQAR 578
+DHS+VESF +G+ CIT+RVYPK+A+ +HLFAFN G QSV + +LNAW+MN A+
Sbjct: 479 IDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQ 535
>pdb|2OXB|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203q) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/539 (57%), Positives = 391/539 (72%), Gaps = 11/539 (2%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMW+CPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWQCPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGSIVEV 404
+DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS +EV
Sbjct: 300 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEV 359
Query: 405 SGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDL 464
G+TA+Q DVE+ W DPQ +C+ N S++ GPFGL++LA+++L
Sbjct: 360 YGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNL 419
Query: 465 TEKTAIFFRIFKGQ---NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSL 521
E T+++FRIFK + NKYVVLMCSD SRSSLKED DKTTYGAFVDI+PH +SLR+L
Sbjct: 420 EEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQ-PLSLRAL 478
Query: 522 VDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
+DHS+VESF +G+ CIT+RVYPK+A+ +HLFAFN G QSV + +LNAW+MN A++S
Sbjct: 479 IDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|2QQV|A Chain A, Crystal Structure Of A Cell-Wall Invertase (E203a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/539 (57%), Positives = 390/539 (72%), Gaps = 11/539 (2%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+NDPNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMW CPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWACPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGSIVEV 404
+DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS +EV
Sbjct: 300 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEV 359
Query: 405 SGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDL 464
G+TA+Q DVE+ W DPQ +C+ N S++ GPFGL++LA+++L
Sbjct: 360 YGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNL 419
Query: 465 TEKTAIFFRIFKGQ---NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSL 521
E T+++FRIFK + NKYVVLMCSD SRSSLKED DKTTYGAFVDI+PH +SLR+L
Sbjct: 420 EEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQ-PLSLRAL 478
Query: 522 VDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
+DHS+VESF +G+ CIT+RVYPK+A+ +HLFAFN G QSV + +LNAW+MN A++S
Sbjct: 479 IDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|2QQW|A Chain A, Crystal Structure Of A Cell-Wall Invertase (D23a) From
Arabidopsis Thaliana In Complex With Sucrose
Length = 537
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/539 (57%), Positives = 390/539 (72%), Gaps = 11/539 (2%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
NQPY T +HF+PP+NW+N PNGPM YKG+YHLFYQ+NP G ++G+ ++WAHS S DLINW
Sbjct: 1 NQPYRTGFHFQPPKNWMNAPNGPMIYKGIYHLFYQWNPKGAVWGN-IVWAHSTSTDLINW 59
Query: 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLK 170
A+ PS P+DIN CWSGS TILP KP ILYTGID QQVQN+A P+NLSDP L+
Sbjct: 60 DPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDPYLR 119
Query: 171 DWVKFSGNPVMTPP--NGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDF 228
+W K NP+M P NG+ FRDPTTAW D +WRV++G +I G+A Y S DF
Sbjct: 120 EWKKSPLNPLMAPDAVNGINASSFRDPTTAWLGQDKKWRVIIGSKIHRRGLAITYTSKDF 179
Query: 229 IHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL---NPGVKHVLKTSLFSDKH 285
+ W K PL+ +GMWECPD FPV+ G+ GV+TS N +KHVLK SL KH
Sbjct: 180 LKWEKSPEPLHYDDGSGMWECPDFFPVTRFGSNGVETSSFGEPNEILKHVLKISLDDTKH 239
Query: 286 DYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDS 345
DYY +GTYD D F PD F + RYDYGK+YASKTFFDSAKNRR+LW W NES S
Sbjct: 240 DYYTIGTYDRVKDKFVPDNGFKMDGTAPRYDYGKYYASKTFFDSAKNRRILWGWTNESSS 299
Query: 346 TQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV-SIHDKELGSGSIVEV 404
+DD++KGWSG+QT+PR IWLD+SGKQL+QWPV E+E LR KQV ++ +K L SGS +EV
Sbjct: 300 VEDDVEKGWSGIQTIPRKIWLDRSGKQLIQWPVREVERLRTKQVKNLRNKVLKSGSRLEV 359
Query: 405 SGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASIQGRFGPFGLLILATEDL 464
G+TA+Q DVE+ W DPQ +C+ N S++ GPFGL++LA+++L
Sbjct: 360 YGVTAAQADVEVLFKVRDLEKADVIEPSWTDPQLICSKMNVSVKSGLGPFGLMVLASKNL 419
Query: 465 TEKTAIFFRIFKGQ---NKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSL 521
E T+++FRIFK + NKYVVLMCSD SRSSLKED DKTTYGAFVDI+PH +SLR+L
Sbjct: 420 EEYTSVYFRIFKARQNSNKYVVLMCSDQSRSSLKEDNDKTTYGAFVDINPHQ-PLSLRAL 478
Query: 522 VDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQARLS 580
+DHS+VESF +G+ CIT+RVYPK+A+ +HLFAFN G QSV + +LNAW+MN A++S
Sbjct: 479 IDHSVVESFGGKGRACITSRVYPKLAIGKSSHLFAFNYGYQSVDVLNLNAWSMNSAQIS 537
>pdb|3UGF|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGF|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis
pdb|3UGG|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGG|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 1-Kestose
pdb|3UGH|A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
pdb|3UGH|B Chain B, Crystal Structure Of A 6-Sst6-Sft From Pachysandra
Terminalis In Complex With 6-Kestose
Length = 546
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/525 (43%), Positives = 325/525 (61%), Gaps = 8/525 (1%)
Query: 56 TSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSH 115
T++HF+P ++W++DP+GP++YKG YH FYQYNP P++G+ W H+VS DLI+W++L
Sbjct: 20 TAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNN-TWGHTVSRDLIHWLYLPL 78
Query: 116 ALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF 175
AL YD+ +SGS T LP + +LYTG+ ++ +LA P +LSDPLL +WVK+
Sbjct: 79 ALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKEMVEMLSLAYPADLSDPLLVEWVKY 138
Query: 176 SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLD 235
GNP+++ P GV FRD +T W +G WR+ +G + + G+A VY + DF + L+
Sbjct: 139 PGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYNTTGIAMVYETKDFKSFKLLE 198
Query: 236 HPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDP 295
L++V +TG+WEC D++PVS G G++TSV P VKHVLK S+ + DYY +GTYD
Sbjct: 199 ELLHAVPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQQRDYYAIGTYDL 258
Query: 296 QMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWS 355
+ ++PD LRYD+GK+YASKTF+D K RRV+WAW E DS D +KGW+
Sbjct: 259 GTNKWTPDNPEEDVGIGLRYDWGKYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWA 318
Query: 356 GVQTVPRAIWLD-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDV 414
VQT+PR + LD K+G ++ WPVEE+E+LR + G+GS+V + TA+Q+D+
Sbjct: 319 NVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDI 378
Query: 415 EIXXXXXXXXXXXXXXXXWVDPQQLCNDK-NASIQGRFGPFGLLILATEDLTEKTAIFFR 473
D C A+ +G GPFGLL+ ATE+L+E+T ++F
Sbjct: 379 IAEFEIDKEALEGTIE---ADMGYNCTTSGGAAERGVLGPFGLLVSATENLSEQTPVYFY 435
Query: 474 IFKGQN-KYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAA 532
I KG + + C D SRSS D+ K G V + K ++R LVDHSIVESFA
Sbjct: 436 IAKGTDGNFKTFFCLDESRSSKASDVSKQVKGFTVPVLDGE-KFTMRLLVDHSIVESFAQ 494
Query: 533 RGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577
G++CIT+RVYP A+ A LF FNN T + + +SL W MN A
Sbjct: 495 GGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNSA 539
>pdb|1UYP|A Chain A, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|B Chain B, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|C Chain C, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|D Chain D, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|E Chain E, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
pdb|1UYP|F Chain F, The Three-Dimensional Structure Of Beta-Fructosidase
(Invertase) From Thermotoga Maritima
Length = 432
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 170/340 (50%), Gaps = 45/340 (13%)
Query: 57 SYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA 116
+YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL A
Sbjct: 5 NYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHLPVA 63
Query: 117 LCPSGPYDINSCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPLLKD 171
L P + + +SGS G K F++YT + ++ Q + M EN D
Sbjct: 64 LYPDD--ETHGVFSGSAVEKDG-KMFLVYTYYRDPTHNKGEKETQCVVMSENGLD----- 115
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG-GQIDNEGMAFVYWSWDFIH 230
+VK+ GNPV++ P FRDP +G WR+++G G+ + G +Y S D H
Sbjct: 116 FVKYDGNPVISKPPEEGTHAFRDPKV--NRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFH 173
Query: 231 WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
W K + ++ + T ECPD+ + G K +L S+ S + +
Sbjct: 174 W-KYEGAIFEDETTKEIECPDLVRI---------------GEKDILIYSITSTNSVLFSM 217
Query: 291 GTY-DPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDD 349
G + ++++ HG FYA++TFF + + + W +
Sbjct: 218 GELKEGKLNVEKRGLLDHGTD---------FYAAQTFFGTDRVVVIGWLQSWLRTGLYPT 268
Query: 350 IDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV 389
+GW+GV ++PR ++++ + +L PV+E+ LR ++V
Sbjct: 269 KREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKV 306
>pdb|1W2T|A Chain A, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|B Chain B, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|C Chain C, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|D Chain D, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|E Chain E, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
pdb|1W2T|F Chain F, Beta-Fructosidase From Thermotoga Maritima In Complex With
Raffinose
Length = 432
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 45/340 (13%)
Query: 57 SYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHA 116
+YHF P W+NDPNG +++KG YH+FYQYNP P +G+ + W H+VS DL++W HL A
Sbjct: 5 NYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGN-ICWGHAVSDDLVHWRHLPVA 63
Query: 117 LCPSGPYDINSCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPLLKD 171
L P + + +SGS G K F++YT + ++ Q + M EN D
Sbjct: 64 LYPDD--ETHGVFSGSAVEKDG-KMFLVYTYYRDPTHNKGEKETQCVVMSENGLD----- 115
Query: 172 WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG-GQIDNEGMAFVYWSWDFIH 230
+VK+ GNPV++ P FRDP +G WR+++G G+ + G +Y S D H
Sbjct: 116 FVKYDGNPVISKPPEEGTHAFRDPKV--NRSNGEWRMVLGSGKDEKIGRVLLYTSDDLFH 173
Query: 231 WTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290
W K + ++ + T +CPD+ + G K +L S+ S + +
Sbjct: 174 W-KYEGAIFEDETTKEIDCPDLVRI---------------GEKDILIYSITSTNSVLFSM 217
Query: 291 GTY-DPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQDD 349
G + ++++ HG FYA++TFF + + + W +
Sbjct: 218 GELKEGKLNVEKRGLLDHGTD---------FYAAQTFFGTDRVVVIGWLQSWLRTGLYPT 268
Query: 350 IDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQV 389
+GW+GV ++PR ++++ + +L PV+E+ LR ++V
Sbjct: 269 KREGWNGVMSLPRELYVENN--ELKVKPVDELLALRKRKV 306
>pdb|1Y9M|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P212121
pdb|1Y9G|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori Complexed With Fructose
pdb|1Y4W|A Chain A, Crystal Structure Of Exo-Inulinase From Aspergillus
Awamori In Spacegroup P21
Length = 518
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 220/530 (41%), Gaps = 82/530 (15%)
Query: 51 NQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110
+QPY YHF P +NW+NDPNG +Y+ G YHLF+QYNP G +G+ + W H++S DL +W
Sbjct: 4 DQPYRGQYHFSPQKNWMNDPNGLLYHNGTYHLFFQYNPGGIEWGN-ISWGHAISEDLTHW 62
Query: 111 IHLSHALCPSG-PYDINSCW-SGSVTI---------LPGDKPFI-LYTG------IDASG 152
AL G D+ + SGS G P + +YT SG
Sbjct: 63 EEKPVALLARGFGSDVTEMYFSGSAVADVNNTSGFGKDGKTPLVAMYTSYYPVAQTLPSG 122
Query: 153 QQV----QNLAMPENLSDPLLKDWVKF-SGNPVM-TPPNGVKDDM--FRDPTTAWQAPDG 204
Q V Q+ ++ +L D L W + + NPV+ PP+ + + FRDP W
Sbjct: 123 QTVQEDQQSQSIAYSLDDGLT--WTTYDAANPVIPNPPSPYEAEYQNFRDPFVFWHDESQ 180
Query: 205 RWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSI---NGTI 261
+W V+ I +Y S + W + + G+WECP + + + N T
Sbjct: 181 KWVVVT--SIAELHKLAIYTSDNLKDWKLVSEFGPYNAQGGVWECPGLVKLPLDSGNSTK 238
Query: 262 GVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTD--FHGNSNDLRYDYG- 318
V TS LNPG S Y +G +D F+PD D + GNS D+G
Sbjct: 239 WVITSGLNPGGPPGTVGS-----GTQYFVGEFD--GTTFTPDADTVYPGNSTANWMDWGP 291
Query: 319 KFYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQW 376
FYA+ + + N V W N + W +PR + L G + LVQ
Sbjct: 292 DFYAAAGYNGLSLNDHVHIGWMNNWQYGANIPTYPWRSAMAIPRHMALKTIGSKATLVQQ 351
Query: 377 PVEEIETLRGKQ--VSIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXXXXXXXXXWV 434
P E ++ K+ S K L GS + +VD+
Sbjct: 352 PQEAWSSISNKRPIYSRTFKTLSEGSTNTTTTGETFKVDLSF------------------ 393
Query: 435 DPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSL 494
S + + F + + A+ + TE+T + + K Q + + HS
Sbjct: 394 -----------SAKSKASTFAIALRASANFTEQTLVGYDFAKQQ----IFLDRTHSGDVS 438
Query: 495 KEDLDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYP 544
++ + Y + D G V L VD S VE F +G+T +T +++P
Sbjct: 439 FDETFASVYHGPLTPD-STGVVKLSIFVDRSSVEVFGGQGETTLTAQIFP 487
>pdb|3PIG|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIG|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum
pdb|3PIJ|A Chain A, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
pdb|3PIJ|B Chain B, Beta-Fructofuranosidase From Bifidobacterium Longum -
Complex With Fructose
Length = 526
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 211/516 (40%), Gaps = 77/516 (14%)
Query: 45 QVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVS 104
+++A N + YH WINDPNG +YKG +H+FYQ +P G +G M W H S
Sbjct: 30 EMAAKRNNRWYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWG-PMHWGHVSS 88
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT------GIDASGQ--QVQ 156
D++NW PS + + +SGS I YT G D +G QVQ
Sbjct: 89 TDMLNWKREPIMFAPSLEQEKDGVFSGSAVIDDNGDLRFYYTGHRWANGHDNTGGDWQVQ 148
Query: 157 NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
A+P+N D L G + P + V D +RDP W+ D + D
Sbjct: 149 MTALPDN--DELTS--ATKQGMIIDCPTDKV-DHHYRDPKV-WKTGDTWYMTFGVSSADK 202
Query: 217 EGMAFVYWSWDFIHW----TKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGV 272
G +++ S D + W HP V M ECPD P I G + V+
Sbjct: 203 RGQMWLFSSKDMVRWEYERVLFQHPDPDVF---MLECPDFSP--IKDKDGNEKWVIGFSA 257
Query: 273 KHVLKTSLFSDK---HDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYG-KFYASKTFFD 328
K S F ++ + Y++GT++P + F P+T+F +D G +YA ++F
Sbjct: 258 MGS-KPSGFMNRNVSNAGYMIGTWEPGGE-FKPETEFR------LWDCGHNYYAPQSF-- 307
Query: 329 SAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQ 388
+ R++++ W + D GW G T+PR I L G +V PV E+E LR
Sbjct: 308 NVDGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDG-DVVTAPVAEMEGLR--- 363
Query: 389 VSIHDKELGSGSI-VEVSGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDKNASI 447
+ L GS+ +++ G D E ++ D AS
Sbjct: 364 ----EDTLDHGSVTLDMDGEQIIADDAEAVEI------------------EMTIDLAAST 401
Query: 448 QGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFV 507
R GL I ATED A + + GQ VV+ R ++
Sbjct: 402 AER---AGLKIHATED----GAYTYVAYDGQIGRVVV-----DRQAMANGDRGYRAAPLT 449
Query: 508 DIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVY 543
D + GK+ LR VD VE + G +++ Y
Sbjct: 450 DAELASGKLDLRVFVDRGSVEVYVNGGHQVLSSYSY 485
>pdb|3SC7|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes.
pdb|3RWK|X Chain X, First Crystal Structure Of An Endo-Inulinase, From
Aspergillus Ficuum: Structural Analysis And Comparison
With Other Gh32 Enzymes
Length = 516
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 136/548 (24%), Positives = 229/548 (41%), Gaps = 92/548 (16%)
Query: 54 YLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL 113
Y SYHF P Q W+N+PNG + +HLF+Q+NP ++G+ + W H+ S DL++W H
Sbjct: 28 YRPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGN-ICWGHATSTDLMHWAHK 86
Query: 114 SHALCPSGPYDINSCWSGSVTILP------GDK---PFIL-YTGIDASGQ-QVQNLAMPE 162
A+ + ++G+ P GD P++ +TG S Q Q Q LA
Sbjct: 87 PTAIADENGVE---AFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSV 143
Query: 163 NLSDPLLKDWVKFSGNPVMTPPNGVKDDMF-----RDPTTAWQAPDGRWRVLV--GGQID 215
+ W KF GNP+++ D+ RDP + G W +++ GGQ
Sbjct: 144 DNG----ATWTKFQGNPIISTSQEAPHDITGGLESRDPKVFFHRQSGNWIMVLAHGGQ-- 197
Query: 216 NEGMAFVYWSWDFIHWTKLDHPLYSVQETGM------WECPDIFPVSINGTIGVD-TSVL 268
+ ++F + S D I+WT L S G+ WE PD+F + + GT ++
Sbjct: 198 -DKLSF-WTSADTINWT-WQSDLKSTSINGLSSDITGWEVPDMFELPVEGTEETTWVVMM 254
Query: 269 NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFF 327
P + S + G++D + P +++ + D G+ F + ++
Sbjct: 255 TPA-----EGSPAGGNGVLAITGSFDGKSFTADPV-----DASTMWLDNGRDFDGALSWV 304
Query: 328 D--SAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ--LVQWPVEEIET 383
+ ++ RR++ A N S W G+ + PR + L K G Q VQ P+ E++T
Sbjct: 305 NVPASDGRRIIAAVMNSYGSNPPTTT--WKGMLSFPRTLSLKKVGTQQHFVQQPITELDT 362
Query: 384 LRGKQVSIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQQLCNDK 443
+ + ++ + G + +S I + +DV + L K
Sbjct: 363 ISTSLQILANQTITPGQTL-LSSIRGTALDVRVAFYPDAGSVL-----------SLAVRK 410
Query: 444 NASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTY 503
AS Q +I T+ ++ T R G Y H+ + L+ED
Sbjct: 411 GASEQ-------TVIKYTQ--SDATLSVDRTESGDISYDPAAGGVHT-AKLEED------ 454
Query: 504 GAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGT-Q 562
G VS+R LVD VE F +G+ I+ ++P + + A N Q
Sbjct: 455 --------GTGLVSIRVLVDTCSVEVFGGQGEAVISDLIFPSDSSDGLALEVTGGNAVLQ 506
Query: 563 SVVISSLN 570
SV + S++
Sbjct: 507 SVDVRSVS 514
>pdb|3KF3|A Chain A, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
pdb|3KF3|B Chain B, Structure Of Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructose
Length = 509
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 157/378 (41%), Gaps = 59/378 (15%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+NDPNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 5 TSEYNRPLI---HFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 61
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 62 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 117
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 118 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 172
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S +ECP + V I + V +NPG
Sbjct: 173 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPG 230
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA 330
S + Y +G +D F PD +S D GK FYA +TF S
Sbjct: 231 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF--SE 274
Query: 331 KNRRVL-WAWANESDSTQDDIDKGWSGVQTVPRAIWL-----DKSGKQ--LVQWPV---- 378
VL AWA+ W ++ R L + KQ L+Q PV
Sbjct: 275 VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDS 334
Query: 379 -EEIETLRGKQVSIHDKE 395
++ L+ K V + +K+
Sbjct: 335 INVVDKLKKKNVKLTNKK 352
>pdb|3KF5|A Chain A, Structure Of Invertase From Schwanniomyces Occidentalis
pdb|3KF5|B Chain B, Structure Of Invertase From Schwanniomyces Occidentalis
Length = 512
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 157/378 (41%), Gaps = 59/378 (15%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+NDPNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 8 TSEYNRPLI---HFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 64
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 65 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 120
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 121 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 175
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S +ECP + V I + V +NPG
Sbjct: 176 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPG 233
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA 330
S + Y +G +D F PD +S D GK FYA +TF S
Sbjct: 234 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF--SE 277
Query: 331 KNRRVL-WAWANESDSTQDDIDKGWSGVQTVPRAIWL-----DKSGKQ--LVQWPV---- 378
VL AWA+ W ++ R L + KQ L+Q PV
Sbjct: 278 VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDS 337
Query: 379 -EEIETLRGKQVSIHDKE 395
++ L+ K V + +K+
Sbjct: 338 INVVDKLKKKNVKLTNKK 355
>pdb|3U75|A Chain A, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|B Chain B, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|C Chain C, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
pdb|3U75|D Chain D, Structure Of E230a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Fructosylnystose
Length = 535
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 156/378 (41%), Gaps = 59/378 (15%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+NDPNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 31 TSEYNRPLI---HFTPEKGWMNDPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 87
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 88 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 143
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 144 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 198
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S + CP + V I + V +NPG
Sbjct: 199 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYACPGLIEVPIENSDKSKWVMFLAINPG 256
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA 330
S + Y +G +D F PD +S D GK FYA +TF S
Sbjct: 257 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF--SE 300
Query: 331 KNRRVL-WAWANESDSTQDDIDKGWSGVQTVPRAIWL-----DKSGKQ--LVQWPV---- 378
VL AWA+ W ++ R L + KQ L+Q PV
Sbjct: 301 VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDS 360
Query: 379 -EEIETLRGKQVSIHDKE 395
++ L+ K V + +K+
Sbjct: 361 INVVDKLKKKNVKLTNKK 378
>pdb|3U14|A Chain A, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
pdb|3U14|B Chain B, Structure Of D50a-Fructofuranosidase From Schwanniomyces
Occidentalis Complexed With Inulin
Length = 535
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 156/378 (41%), Gaps = 59/378 (15%)
Query: 47 SAPANQPYLTSYHFRPPQNWINDPNGPMYYK--GVYHLFYQYNPLGPLFGDKMIWAHSVS 104
++ N+P + HF P + W+N PNG Y K ++HL++QYNP +G + W H+ S
Sbjct: 31 TSEYNRPLI---HFTPEKGWMNAPNGLFYDKTAKLWHLYFQYNPNATAWGQPLYWGHATS 87
Query: 105 YDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENL 164
DL++W A+ P +D +SGS+ + + + ID + + V N+
Sbjct: 88 NDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVA--IYTNNI 143
Query: 165 SDPLLKD----------WVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214
D +D + K+ NPV+ V + FRDP W +W ++V
Sbjct: 144 PDNQTQDIAFSLDGGYTFTKYENNPVI----DVSSNQFRDPKVFWHEDSNQWIMVVSKS- 198
Query: 215 DNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIG---VDTSVLNPG 271
E ++ S + +W L+ S +ECP + V I + V +NPG
Sbjct: 199 -QEYKIQIFGSANLKNWV-LNSNFSSGYYGNQYECPGLIEVPIENSDKSKWVMFLAINPG 256
Query: 272 VKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSA 330
S + Y +G +D F PD +S D GK FYA +TF S
Sbjct: 257 -------SPLGGSINQYFVGDFDGFQ--FVPD-----DSQTRFVDIGKDFYAFQTF--SE 300
Query: 331 KNRRVL-WAWANESDSTQDDIDKGWSGVQTVPRAIWL-----DKSGKQ--LVQWPV---- 378
VL AWA+ W ++ R L + KQ L+Q PV
Sbjct: 301 VEHGVLGLAWASNWQYADQVPTNPWRSSTSLARNYTLRYVHTNAETKQLTLIQNPVLPDS 360
Query: 379 -EEIETLRGKQVSIHDKE 395
++ L+ K V + +K+
Sbjct: 361 INVVDKLKKKNVKLTNKK 378
>pdb|4FFG|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
pdb|4FFG|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens In Complex With Dfa-Iv
Length = 492
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 188/526 (35%), Gaps = 112/526 (21%)
Query: 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS 114
+ YH PP W+ DP P+ G Y L+Y ++ G W H+ + D + + H
Sbjct: 1 MAVYHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNNGPGG---WDHASTTDGVAFTHHG 57
Query: 115 HA--LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMP----------- 161
L P P WSGS + + + A Q +
Sbjct: 58 TVMPLRPDFP-----VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTD 112
Query: 162 -----ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
L DP++ V G TP + FRDP W G W ++G
Sbjct: 113 GGFTFTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----R 165
Query: 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKH-V 275
A Y S + WT + Y G ECPD+F ++ + G +H V
Sbjct: 166 LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWV 214
Query: 276 LKTSLFSDKHDY-------YVLGTYDPQMDIFSPDTDFHGNSNDLRY-DYG-KFYASKTF 326
L S+ D + Y GT+D + FH + ++ D+G +YA+ T+
Sbjct: 215 LAASM--DAYGIGLPMTYAYWTGTWDGEQ--------FHADDLTPQWLDWGWDWYAAVTW 264
Query: 327 --FDSAKNRRVLWAWANE----SDSTQDDIDKGWSGVQTVPRAIWLDKSGK---QLVQWP 377
D+ + +R+ AW N + D G++G ++ R + L + L+ P
Sbjct: 265 PSIDAPETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTP 324
Query: 378 VEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQ 437
V + ++ D+ + +++ +G A +++++I W
Sbjct: 325 VAALTNYVTATTTLPDRTVDGSAVLPWNG-RAYEIELDI---------------AW---- 364
Query: 438 QLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKED 497
D ++ G+ + + D T T I KY + D S L
Sbjct: 365 ----DTATNV-------GISVGRSPDGTRHTNI--------GKYGADLYVDRGPSDLAGY 405
Query: 498 LDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVY 543
A IDP V LR LVD VE F G T ++ +V+
Sbjct: 406 SLAPYSRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVH 451
>pdb|4FFF|A Chain A, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|B Chain B, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|C Chain C, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
pdb|4FFF|D Chain D, Crystal Structure Of Levan Fructotransferase From
Arthrobacter Ureafaciens
Length = 490
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 115/526 (21%), Positives = 188/526 (35%), Gaps = 112/526 (21%)
Query: 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS 114
+ YH PP W+ DP P+ G Y L+Y ++ G W H+ + D + + H
Sbjct: 1 MAVYHMTPPSGWLCDPQRPVTTHGAYQLYYLHSDQNNGPGG---WDHASTTDGVAFTHHG 57
Query: 115 HA--LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMP----------- 161
L P P WSGS + + + A Q +
Sbjct: 58 TVMPLRPDFP-----VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTD 112
Query: 162 -----ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
L DP++ V G TP + FRDP W G W ++G
Sbjct: 113 GGFTFTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----R 165
Query: 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKH-V 275
A Y S + WT + Y G ECPD+F ++ + G +H V
Sbjct: 166 LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWV 214
Query: 276 LKTSLFSDKHDY-------YVLGTYDPQMDIFSPDTDFHGNSNDLRY-DYG-KFYASKTF 326
L S+ D + Y GT+D + FH + ++ D+G +YA+ T+
Sbjct: 215 LAASM--DAYGIGLPMTYAYWTGTWDGEQ--------FHADDLTPQWLDWGWDWYAAVTW 264
Query: 327 --FDSAKNRRVLWAWANE----SDSTQDDIDKGWSGVQTVPRAIWLDKSGK---QLVQWP 377
D+ + +R+ AW N + D G++G ++ R + L + L+ P
Sbjct: 265 PSIDAPETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTP 324
Query: 378 VEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQ 437
V + ++ D+ + +++ +G A +++++I W
Sbjct: 325 VAALTNYVTATTTLPDRTVDGSAVLPWNG-RAYEIELDI---------------AW---- 364
Query: 438 QLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKED 497
D ++ G+ + + D T T I KY + D S L
Sbjct: 365 ----DTATNV-------GISVGRSPDGTRHTNI--------GKYGADLYVDRGPSDLAGY 405
Query: 498 LDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVY 543
A IDP V LR LVD VE F G T ++ +V+
Sbjct: 406 SLAPYSRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVH 451
>pdb|4FFH|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFH|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Sucrose
pdb|4FFI|A Chain A, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|B Chain B, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|C Chain C, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
pdb|4FFI|D Chain D, Crystal Structure Of Levan Fructotransferase D54n Mutant
From Arthrobacter Ureafaciens In Complex With Levanbiose
Length = 492
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 114/526 (21%), Positives = 188/526 (35%), Gaps = 112/526 (21%)
Query: 55 LTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS 114
+ YH PP W+ +P P+ G Y L+Y ++ G W H+ + D + + H
Sbjct: 1 MAVYHMTPPSGWLCNPQRPVTTHGAYQLYYLHSDQNNGPGG---WDHASTTDGVAFTHHG 57
Query: 115 HA--LCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMP----------- 161
L P P WSGS + + + A Q +
Sbjct: 58 TVMPLRPDFP-----VWSGSAVVDTANTAGFGAGAVVALATQPTDGVRKYQEQYLYWSTD 112
Query: 162 -----ENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216
L DP++ V G TP + FRDP W G W ++G
Sbjct: 113 GGFTFTALPDPVI---VNTDGRAATTPAEIENAEWFRDPKIHWDTARGEWVCVIG----R 165
Query: 217 EGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKH-V 275
A Y S + WT + Y G ECPD+F ++ + G +H V
Sbjct: 166 LRYAAFYTSPNLRDWTLRRNFDYPNHALGGIECPDLFEITADD-----------GTRHWV 214
Query: 276 LKTSLFSDKHDY-------YVLGTYDPQMDIFSPDTDFHGNSNDLRY-DYG-KFYASKTF 326
L S+ D + Y GT+D + FH + ++ D+G +YA+ T+
Sbjct: 215 LAASM--DAYGIGLPMTYAYWTGTWDGEQ--------FHADDLTPQWLDWGWDWYAAVTW 264
Query: 327 --FDSAKNRRVLWAWANE----SDSTQDDIDKGWSGVQTVPRAIWLDKSGK---QLVQWP 377
D+ + +R+ AW N + D G++G ++ R + L + L+ P
Sbjct: 265 PSIDAPETKRLAIAWMNNWKYAARDVPTDASDGYNGQNSIVRELRLARQPGGWYTLLSTP 324
Query: 378 VEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIXXXXXXXXXXXXXXXXWVDPQ 437
V + ++ D+ + +++ +G A +++++I W
Sbjct: 325 VAALTNYVTATTTLPDRTVDGSAVLPWNG-RAYEIELDI---------------AW---- 364
Query: 438 QLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKED 497
D ++ G+ + + D T T I KY + D S L
Sbjct: 365 ----DTATNV-------GISVGRSPDGTRHTNI--------GKYGADLYVDRGPSDLAGY 405
Query: 498 LDKTTYGAFVDIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVY 543
A IDP V LR LVD VE F G T ++ +V+
Sbjct: 406 SLAPYSRAAAPIDPGARSVHLRILVDTQSVEVFVNAGHTVLSQQVH 451
>pdb|1G01|A Chain A, Alkaline Cellulase K Catalytic Domain
pdb|1G0C|A Chain A, Alkaline Cellulase K Catalytic Domain-Cellobiose Complex
Length = 364
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 25/117 (21%)
Query: 261 IGVDTSVLNPGVKHVLKTSL-FSDKHDYYVLGTY------DPQMDIFSPDTDFHGNSNDL 313
IG + NP VK ++ + + +HD YV+ + DP+ D++S DF D
Sbjct: 77 IGENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRADVYSGAYDFFEEIAD- 135
Query: 314 RYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD------DIDKGWSGVQTVPRAI 364
+ D KN ++W ANE + + +KGW V+ I
Sbjct: 136 -----------HYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPI 181
>pdb|1QWL|A Chain A, Structure Of Helicobacter Pylori Catalase
pdb|1QWL|B Chain B, Structure Of Helicobacter Pylori Catalase
pdb|1QWM|A Chain A, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
pdb|1QWM|B Chain B, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
Length = 505
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 205 RWRVLVGGQIDNEGMAFVYWSWDFIH-WTKLDHPLYSVQETGMWECPDIFPVSINGTIGV 263
+W++ + + + + + +D W D+PL V + + P+ + +
Sbjct: 257 KWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQDYPLMEVGIVELNKNPENYFAEVEQAAFT 316
Query: 264 DTSVLNPGVKH----VLKTSLFS--DKHDYYVLGTYDPQMDIFSPDTDFHGNSND 312
+V+ PG+ + +L+ LFS D H Y LG PQ+ + P FH +S D
Sbjct: 317 PANVV-PGIGYSPDRMLQGRLFSYGDTHRY-RLGVNYPQIPVNKPRCPFHSSSRD 369
>pdb|2A9E|A Chain A, Helicobacter Pylori Catalase Compound I
pdb|2A9E|B Chain B, Helicobacter Pylori Catalase Compound I
pdb|2IQF|A Chain A, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
pdb|2IQF|B Chain B, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
Length = 505
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 205 RWRVLVGGQIDNEGMAFVYWSWDFIH-WTKLDHPLYSVQETGMWECPDIFPVSINGTIGV 263
+W++ + + + + + +D W D+PL V + + P+ + +
Sbjct: 257 KWKLSIQVMPEEDAKKYRFHPFDVTKIWYTQDYPLXEVGIVELNKNPENYFAEVEQAAFT 316
Query: 264 DTSVLNPGVKH----VLKTSLFS--DKHDYYVLGTYDPQMDIFSPDTDFHGNSND 312
+V+ PG+ + +L+ LFS D H Y LG PQ+ + P FH +S D
Sbjct: 317 PANVV-PGIGYSPDRMLQGRLFSYGDTHRY-RLGVNYPQIPVNKPRCPFHSSSRD 369
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,359,975
Number of Sequences: 62578
Number of extensions: 877990
Number of successful extensions: 1848
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1732
Number of HSP's gapped (non-prelim): 46
length of query: 587
length of database: 14,973,337
effective HSP length: 104
effective length of query: 483
effective length of database: 8,465,225
effective search space: 4088703675
effective search space used: 4088703675
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)