Query 007857
Match_columns 587
No_of_seqs 267 out of 1605
Neff 7.2
Searched_HMMs 46136
Date Thu Mar 28 16:16:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007857.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007857hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 2E-114 5E-119 900.0 39.4 542 31-577 26-570 (571)
2 COG1621 SacC Beta-fructosidase 100.0 1E-100 2E-105 821.1 47.6 450 48-576 22-486 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 2.8E-91 6.2E-96 761.5 48.4 415 50-545 9-445 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 3.4E-87 7.4E-92 727.6 49.5 421 59-534 1-437 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 1.1E-76 2.4E-81 618.1 28.2 299 59-377 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 4E-68 8.6E-73 550.9 34.3 286 65-380 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 5.3E-56 1.2E-60 456.3 31.0 267 68-371 1-279 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 3.9E-39 8.5E-44 328.7 27.7 244 68-343 7-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 3.3E-36 7.2E-41 307.6 27.4 269 68-365 1-286 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 1.6E-25 3.5E-30 233.9 24.4 195 68-281 8-256 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 1.4E-22 2.9E-27 209.6 20.9 190 58-256 4-282 (291)
12 cd08984 GH43_5 Glycosyl hydrol 99.8 3.1E-19 6.6E-24 185.1 21.3 161 68-256 80-246 (294)
13 cd09004 GH43_bXyl Glycosyl hyd 99.8 2.4E-19 5.1E-24 184.0 20.1 191 64-291 5-197 (275)
14 cd08993 GH43_DUF377 Glycosyl h 99.8 6.8E-19 1.5E-23 180.1 19.2 147 69-236 2-156 (268)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.8 4.4E-17 9.5E-22 167.8 22.0 196 65-292 6-212 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 2.2E-16 4.7E-21 162.0 21.1 195 69-291 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.7 3E-15 6.6E-20 152.0 20.7 191 69-292 2-202 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.6 2.7E-14 5.9E-19 147.8 20.8 180 68-281 1-203 (294)
19 cd08992 GH43_like_1 Glycosyl h 99.6 4.5E-14 9.7E-19 148.0 19.1 170 56-234 25-241 (349)
20 cd08998 GH43_ABN_1 Glycosyl hy 99.6 9.7E-14 2.1E-18 143.4 20.7 189 67-292 1-206 (288)
21 cd08984 GH43_5 Glycosyl hydrol 99.6 2.4E-13 5.2E-18 141.1 20.3 170 67-256 11-193 (294)
22 cd08985 GH43_6 Glycosyl hydrol 99.5 3.6E-12 7.8E-17 130.4 24.3 190 68-292 4-203 (265)
23 cd09000 GH43_XYL_1 Glycosyl hy 99.4 7.6E-12 1.6E-16 129.4 20.3 178 65-281 6-196 (288)
24 PF04041 DUF377: Domain of unk 99.4 7.4E-12 1.6E-16 130.7 16.9 159 72-249 36-201 (312)
25 PF04616 Glyco_hydro_43: Glyco 99.4 3E-11 6.5E-16 124.1 21.2 183 65-282 8-200 (286)
26 cd08983 GH43_4 Glycosyl hydrol 99.4 5.6E-11 1.2E-15 122.3 23.0 182 65-280 16-206 (276)
27 cd09003 GH43_AXH_1 Glycosyl hy 99.4 2.6E-11 5.6E-16 126.9 20.2 186 65-281 7-215 (311)
28 cd08979 GH_J Glycosyl hydrolas 99.3 5.9E-11 1.3E-15 121.0 16.4 137 65-213 64-209 (276)
29 PF08244 Glyco_hydro_32C: Glyc 99.3 3E-11 6.6E-16 102.1 10.7 75 452-534 9-86 (86)
30 cd08988 GH43_ABN Glycosyl hydr 99.3 3.6E-10 7.8E-15 116.5 20.6 180 68-281 1-193 (279)
31 cd08981 GH43_2 Glycosyl hydrol 99.2 5.4E-10 1.2E-14 115.9 20.3 134 65-212 4-142 (291)
32 cd08992 GH43_like_1 Glycosyl h 99.2 9.1E-10 2E-14 115.7 18.4 171 68-256 113-310 (349)
33 cd08989 GH43_XYL Glycosyl hydr 99.1 2.7E-09 5.8E-14 109.4 19.6 174 65-282 6-190 (269)
34 cd09001 GH43_XYL_2 Glycosyl hy 99.1 2.6E-09 5.7E-14 109.5 17.6 170 65-282 9-192 (269)
35 cd08986 GH43_7 Glycosyl hydrol 99.1 3.4E-09 7.4E-14 108.7 18.1 180 66-281 1-202 (269)
36 cd08993 GH43_DUF377 Glycosyl h 99.0 3.4E-09 7.4E-14 108.5 15.3 99 130-237 2-104 (268)
37 cd08980 GH43_1 Glycosyl hydrol 99.0 1.5E-08 3.2E-13 104.8 19.3 188 69-292 2-205 (288)
38 cd09002 GH43_XYL_3 Glycosyl hy 99.0 1.2E-08 2.5E-13 105.4 17.8 120 67-212 15-134 (280)
39 cd08982 GH43_3 Glycosyl hydrol 98.9 1.1E-07 2.4E-12 98.8 18.6 171 68-292 4-191 (295)
40 COG2152 Predicted glycosylase 98.8 7.5E-08 1.6E-12 97.5 15.6 151 72-239 35-193 (314)
41 cd08987 GH62 Glycosyl hydrolas 98.8 1.7E-07 3.6E-12 95.2 17.2 191 60-291 14-217 (303)
42 PF02435 Glyco_hydro_68: Levan 98.7 5.3E-07 1.2E-11 96.2 18.3 194 68-280 63-318 (428)
43 cd08994 GH43_like_2 Glycosyl h 98.7 1.6E-07 3.5E-12 97.1 12.3 108 68-181 81-198 (291)
44 cd08995 GH32_Aec43_like Glycos 98.6 1E-06 2.3E-11 90.6 16.4 131 69-214 64-201 (280)
45 cd08999 GH43_ABN_2 Glycosyl hy 98.6 1.8E-06 4E-11 88.9 16.2 157 67-236 62-227 (287)
46 cd08990 GH43_AXH_like Glycosyl 98.5 5.4E-06 1.2E-10 85.1 19.3 152 65-238 62-220 (274)
47 cd08978 GH_F Glycosyl hydrolas 98.5 2.6E-06 5.7E-11 86.4 16.4 157 64-235 56-216 (271)
48 cd08983 GH43_4 Glycosyl hydrol 98.5 1.2E-06 2.5E-11 90.4 13.7 89 177-281 5-99 (276)
49 cd08991 GH43_bXyl_2 Glycosyl h 98.5 1.2E-05 2.7E-10 83.1 20.0 154 66-234 54-227 (294)
50 PF04041 DUF377: Domain of unk 98.5 2.6E-06 5.6E-11 89.2 14.1 103 125-236 29-134 (312)
51 cd08772 GH43_62_32_68 Glycosyl 98.4 1E-05 2.2E-10 82.4 15.9 156 66-234 59-224 (286)
52 cd08986 GH43_7 Glycosyl hydrol 98.3 5.9E-06 1.3E-10 84.8 13.1 121 192-337 2-147 (269)
53 cd08989 GH43_XYL Glycosyl hydr 98.2 1E-05 2.2E-10 83.1 12.6 78 178-281 1-87 (269)
54 cd08998 GH43_ABN_1 Glycosyl hy 98.2 3.4E-05 7.3E-10 79.8 16.4 153 65-232 56-217 (288)
55 cd09002 GH43_XYL_3 Glycosyl hy 98.2 1.8E-05 3.8E-10 81.8 14.2 78 177-281 7-84 (280)
56 cd08996 GH32_B_Fructosidase Gl 98.2 2.1E-05 4.6E-10 81.6 13.5 130 73-214 68-202 (298)
57 cd08981 GH43_2 Glycosyl hydrol 98.2 2.9E-05 6.4E-10 80.6 13.7 78 190-282 4-88 (291)
58 cd09004 GH43_bXyl Glycosyl hyd 98.0 0.00045 9.7E-09 70.9 18.0 140 69-236 68-213 (275)
59 cd08985 GH43_6 Glycosyl hydrol 97.9 0.00085 1.8E-08 68.7 19.5 144 67-236 65-214 (265)
60 TIGR01322 scrB_fam sucrose-6-p 97.9 0.00012 2.6E-09 80.7 13.7 131 73-213 91-225 (445)
61 cd08997 GH68 Glycosyl hydrolas 97.8 0.00039 8.5E-09 73.6 14.9 149 76-233 80-284 (349)
62 cd08988 GH43_ABN Glycosyl hydr 97.7 0.00097 2.1E-08 68.8 16.0 150 67-233 57-219 (279)
63 cd09003 GH43_AXH_1 Glycosyl hy 97.7 0.0027 5.9E-08 66.6 18.4 147 69-238 80-248 (311)
64 PF04616 Glyco_hydro_43: Glyco 97.6 0.00055 1.2E-08 70.2 12.3 155 52-214 104-261 (286)
65 smart00640 Glyco_32 Glycosyl h 97.6 0.0005 1.1E-08 75.6 12.0 131 73-213 74-215 (437)
66 COG3507 XynB Beta-xylosidase [ 97.6 0.0012 2.7E-08 72.4 14.3 173 68-281 31-225 (549)
67 COG2152 Predicted glycosylase 97.6 0.00037 8E-09 71.1 9.6 113 117-238 14-139 (314)
68 cd08980 GH43_1 Glycosyl hydrol 97.5 0.0042 9.1E-08 64.2 17.4 125 73-214 60-195 (288)
69 cd09001 GH43_XYL_2 Glycosyl hy 97.5 0.0026 5.7E-08 65.2 15.4 133 68-233 77-212 (269)
70 cd09000 GH43_XYL_1 Glycosyl hy 97.3 0.0086 1.9E-07 61.9 16.1 143 67-234 68-219 (288)
71 cd00260 Sialidase Sialidases o 97.3 0.011 2.4E-07 62.6 17.0 167 51-235 57-239 (351)
72 PF13088 BNR_2: BNR repeat-lik 97.2 0.017 3.6E-07 58.8 17.0 148 67-234 48-199 (275)
73 PF03664 Glyco_hydro_62: Glyco 96.9 0.047 1E-06 54.2 16.3 185 60-282 16-208 (271)
74 cd08987 GH62 Glycosyl hydrolas 96.7 0.043 9.3E-07 56.4 14.4 142 69-234 80-230 (303)
75 cd08982 GH43_3 Glycosyl hydrol 96.6 0.025 5.4E-07 59.0 12.5 79 127-211 159-238 (295)
76 PF13088 BNR_2: BNR repeat-lik 96.6 0.084 1.8E-06 53.7 16.1 144 78-235 1-151 (275)
77 PF00251 Glyco_hydro_32N: Glyc 96.2 0.12 2.7E-06 54.0 15.2 117 131-256 12-138 (308)
78 cd00260 Sialidase Sialidases o 94.5 6.7 0.00014 41.4 21.4 146 96-256 45-207 (351)
79 PF13859 BNR_3: BNR repeat-lik 92.4 0.99 2.1E-05 47.4 10.5 143 69-235 62-213 (310)
80 COG3507 XynB Beta-xylosidase [ 92.2 2.1 4.5E-05 47.7 13.0 150 62-229 86-243 (549)
81 COG3940 Predicted beta-xylosid 89.9 1.8 4E-05 42.4 8.7 102 73-182 137-247 (324)
82 PF02435 Glyco_hydro_68: Levan 87.2 18 0.0004 39.4 15.1 129 77-214 143-320 (428)
83 PF13810 DUF4185: Domain of un 85.1 25 0.00053 37.1 14.6 156 66-234 93-272 (316)
84 PF03664 Glyco_hydro_62: Glyco 80.7 44 0.00094 33.8 13.3 70 69-149 78-153 (271)
85 COG1621 SacC Beta-fructosidase 80.2 28 0.00061 38.8 13.2 98 135-240 48-153 (486)
86 PTZ00334 trans-sialidase; Prov 76.9 23 0.0005 41.7 11.7 88 131-236 263-351 (780)
87 PF13810 DUF4185: Domain of un 72.4 19 0.00041 38.0 9.0 92 136-235 102-210 (316)
88 KOG0228 Beta-fructofuranosidas 69.5 26 0.00057 38.9 9.3 91 137-236 68-168 (571)
89 PF06905 FAIM1: Fas apoptotic 45.7 69 0.0015 30.9 6.8 31 516-547 108-138 (177)
90 cd06903 lectin_EMP46_EMP47 EMP 45.4 3.2E+02 0.0069 27.1 13.9 57 514-573 152-213 (215)
91 PF02012 BNR: BNR/Asp-box repe 32.6 35 0.00076 18.1 1.4 11 160-174 2-12 (12)
92 PF00337 Gal-bind_lectin: Gala 31.7 3.7E+02 0.008 23.9 14.0 24 513-537 82-105 (133)
93 PTZ00449 104 kDa microneme/rho 29.9 1.6E+02 0.0034 33.1 7.1 54 76-148 56-109 (943)
94 PF06439 DUF1080: Domain of Un 29.0 1.3E+02 0.0028 28.1 5.9 55 513-571 127-184 (185)
95 cd00070 GLECT Galectin/galacto 27.3 4.4E+02 0.0095 23.3 8.8 24 513-537 77-100 (127)
96 COG3940 Predicted beta-xylosid 22.2 8E+02 0.017 24.5 15.8 202 68-293 14-224 (324)
97 PF07172 GRP: Glycine rich pro 21.3 69 0.0015 27.6 2.1 12 9-20 1-12 (95)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-114 Score=899.99 Aligned_cols=542 Identities=58% Similarity=0.992 Sum_probs=500.8
Q ss_pred ccccccCcccccccccCCCCCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCccc
Q 007857 31 SEACYGTNQKLQSLQVSAPANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINW 110 (587)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W 110 (587)
.++...+.+++.+.+.++..+.++||.|||+||+|||||| +|++|.|||||||||.+.+|| +.+||||+|+||+||
T Consensus 26 ~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg-~ivWGHavSkDLinW 101 (571)
T KOG0228|consen 26 LDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWG-NIVWGHAVSKDLINW 101 (571)
T ss_pred hhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceee-eeEeeeecchhhccc
Confidence 3333344445544334477889999999999999999999 899999999999999999999 999999999999999
Q ss_pred EeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC--CCCC
Q 007857 111 IHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP--NGVK 188 (587)
Q Consensus 111 ~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p--~~~~ 188 (587)
+.+|+||.|+.++|..|||||||+++++|+++++|||.+...+|.|.+|+..|.+||.+++|.|.++||++.++ .+++
T Consensus 102 ~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in 181 (571)
T KOG0228|consen 102 EALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGIN 181 (571)
T ss_pred cccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCC
Confidence 99999999999999999999999999999999999999887899999999999999999999999999999877 6778
Q ss_pred CCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccC
Q 007857 189 DDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVL 268 (587)
Q Consensus 189 ~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~ 268 (587)
...||||+++|.+++|+|+|++|+..+.+|.+.+|+|+|+++|+..+.|+++...++||||||||++..+|++|++.+..
T Consensus 182 ~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~ 261 (571)
T KOG0228|consen 182 SSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLF 261 (571)
T ss_pred hhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEe
Confidence 89999999999999999999999988788999999999999999999999988889999999999999999999998887
Q ss_pred CCCceeEEEEeeCCCCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCCCcccceEecCCCCcEEEEEeccCCCCCCC
Q 007857 269 NPGVKHVLKTSLFSDKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTFFDSAKNRRVLWAWANESDSTQD 348 (587)
Q Consensus 269 ~~~~k~vl~~s~~~~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~~d~~~grri~~gW~~~~~~~~~ 348 (587)
+...|||+..|+.+++..+|+||+||+++.+|.|+..+.+.....+.|||.|||.|||.|..++|||+|||+++|++..+
T Consensus 262 ~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~d 341 (571)
T KOG0228|consen 262 GSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTND 341 (571)
T ss_pred ccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCccccc
Confidence 77679999999988899999999999988899999877665455678999999999999988999999999999999998
Q ss_pred CCCCCcceeeeeeEEEEEec-CCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCcccccc
Q 007857 349 DIDKGWSGVQTVPRAIWLDK-SGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAE 427 (587)
Q Consensus 349 ~~~~gW~g~ltlPReL~l~~-dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~ 427 (587)
..+.||+|.|||||+++|+. .|+.|.|.|+.|++.||.+.+...+.....+..++..++++.+.++|++|++..++.+.
T Consensus 342 d~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~~Leka~ 421 (571)
T KOG0228|consen 342 DPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVEDLEKAI 421 (571)
T ss_pred chhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEeccccccc
Confidence 99999999999999999997 68899999999999999998887777778888899999999999999999999888899
Q ss_pred ccCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEE
Q 007857 428 LFDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFV 507 (587)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~ 507 (587)
.++++|.+++.+|...+.++.++.++||+..+++.|++|+|.++|.+.+......+.+|.|.++|++..+.+++.+++++
T Consensus 422 ~~~~~~t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~~~~v~~csd~~~sSl~~d~~k~~~~afv 501 (571)
T KOG0228|consen 422 VIEPSWTDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKKKYVVLMCSDQSRSSLAEDNYKPSIGAFV 501 (571)
T ss_pred ccCccccccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecCCcceeEEeccCCCccccccccccceeeEE
Confidence 99999988999999999999999999999999999999999999999987667788999999999999988999999999
Q ss_pred EecCCCCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeecccc
Q 007857 508 DIDPHHGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQA 577 (587)
Q Consensus 508 ~~~~~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~~ 577 (587)
++.+ .++++||++||+|+||.|+|+|++|+|+|+||..+......+++|++|...+.|.++.+|+|+.+
T Consensus 502 dv~~-~~~islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 502 DVYP-HQKISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred EecC-CCccchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 8877 79999999999999999999999999999999998777889999998888889999999999976
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-100 Score=821.06 Aligned_cols=450 Identities=33% Similarity=0.605 Sum_probs=356.2
Q ss_pred CCCCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCC
Q 007857 48 APANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINS 127 (587)
Q Consensus 48 ~~~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G 127 (587)
....++|||.|||+||.||||||||++|++|+|||||||||+++.|| +||||||+|+|||||+++|+||.|++++|.+|
T Consensus 22 ~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g 100 (486)
T COG1621 22 SVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHG-PKHWGHAVSKDLVHWEHLPIALAPDDDYDSHG 100 (486)
T ss_pred hccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCC-CceeeeeccCCcccceECCceecCCCccccCC
Confidence 44558999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred eEeeeEEEccCCeEEEEEeeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCC
Q 007857 128 CWSGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~ 203 (587)
|||||||++ +|+..+||||+.+ .+.+.||+|+|+|+ .+|+|+.+|||+..|+++ +.|||||||+|+ ++
T Consensus 101 ~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w~-~~ 172 (486)
T COG1621 101 CYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVWD-EG 172 (486)
T ss_pred ceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCccccc-CC
Confidence 999999985 9999999999864 37889999999996 589998789999888876 899999999998 68
Q ss_pred CeEEEEEeeee-CCcceEEEEEeCCCCCCEEccccCcc-CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 204 GRWRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 204 g~~~m~~g~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~-~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
|+|||++|++. +..|+|+||+|+||++|++.|++..+ +..++||||||||+|+ +.+.+. +|++..+.+
T Consensus 173 ~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~~--------~~pqg~~~~ 242 (486)
T COG1621 173 GKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVLL--------FWPQGLSIN 242 (486)
T ss_pred CcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCceE--------EcceeeecC
Confidence 89999999987 56899999999999999999987665 4456799999999999 434443 566666653
Q ss_pred C-----CCeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCC--CCCCCCC
Q 007857 282 S-----DKHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST--QDDIDKG 353 (587)
Q Consensus 282 ~-----~~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~--~~~~~~g 353 (587)
+ ...++|++|+||++ +|++... .+++||+|+ |||||||.++ +||||++|||++|++. .|+...+
T Consensus 243 ~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~ 314 (486)
T COG1621 243 GGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEG 314 (486)
T ss_pred CCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccC
Confidence 2 45689999999997 6666542 367999999 9999999985 8999999999999997 5666679
Q ss_pred cceeeeeeEEEEEecCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCccccccccCCCc
Q 007857 354 WSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAELFDPAW 433 (587)
Q Consensus 354 W~g~ltlPReL~l~~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~ 433 (587)
|+|||||||||+|+ +| +|+|+|++||++||+.+....+..+.+. ..+....+.++++++.+...
T Consensus 315 w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~------------ 378 (486)
T COG1621 315 WRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIWT------------ 378 (486)
T ss_pred cCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeecc------------
Confidence 99999999999996 56 6999999999999999666666555544 22323334445544333211
Q ss_pred CCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEEEecCCC
Q 007857 434 VDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVDIDPHH 513 (587)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~~~~~~ 513 (587)
....+|+.++.+.. .+.++.. ++. +++||++|. ......+..+.+.+..
T Consensus 379 ----------------~~~~~~~~l~~~~~-----~~~~~~~---~~~---l~ldR~~s~----~f~~~~~~~r~~~~~~ 427 (486)
T COG1621 379 ----------------DATSFGLELRMGLN-----LVGYDVE---NET---LTLDRSDSP----LFTVQDGETRECFIEN 427 (486)
T ss_pred ----------------ccceEEEEeecCcc-----eeccccc---cce---EEEeccccc----cccccCCceeeeccCC
Confidence 11257888876543 4455432 233 456888871 1112223334444433
Q ss_pred -CeEEEEEEEeCceEEEEcCCCceEEEEEeecCCccCCccEEEEEecCceeEEEeEEEeeeccc
Q 007857 514 -GKVSLRSLVDHSIVESFAARGKTCITTRVYPKVAVENEAHLFAFNNGTQSVVISSLNAWNMNQ 576 (587)
Q Consensus 514 -~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~~~~~~~i~~~~~g~~~~~v~~l~~w~~~~ 576 (587)
.+++||||||+|+||||+|||+.|||+|+||... ..++.+.+.. +.+.+. .++|.+++
T Consensus 428 ~~~v~l~if~D~ssvEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~-g~~~~~-~~~~~l~~ 486 (486)
T COG1621 428 GAKVHLRIFVDNSSVEIFINDGEKVFTSRIFPTPD---ANGISLYSDQ-GVAVVQ-NTIWPLKS 486 (486)
T ss_pred CceEEEEEEEeCCeEEEEEcCCceEEEEEecCCCc---ccceEEEccC-ceEEEE-eeeeccCC
Confidence 4489999999999999999999999999999886 3445444443 233333 37898874
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=2.8e-91 Score=761.55 Aligned_cols=415 Identities=32% Similarity=0.577 Sum_probs=330.1
Q ss_pred CCCCcccceeecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeE
Q 007857 50 ANQPYLTSYHFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCW 129 (587)
Q Consensus 50 ~~~~~Rp~yH~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~ 129 (587)
.+++|||+|||+|+.||||||||++|++|+|||||||+|+++.|| +||||||+|+|||||+++|+||.|++++|+.|||
T Consensus 9 ~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 9 LQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHG-LKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred ccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccC-ceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 457899999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred eeeEEEccCCeEEEEEeeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCe
Q 007857 130 SGSVTILPGDKPFILYTGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~ 205 (587)
||||++ ++|+++|||||+.. .+.+.|++|+|+|+ .+|+|+. +|||.+++.....+||||+| |+ .+|+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~ 158 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGH 158 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCE
Confidence 999998 59999999999753 25688999999986 6899974 59997654444678999996 55 3689
Q ss_pred EEEEEeeee-CCcceEEEEEeCCCCCCEEccccCccC-----CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEe
Q 007857 206 WRVLVGGQI-DNEGMAFVYWSWDFIHWTKLDHPLYSV-----QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTS 279 (587)
Q Consensus 206 ~~m~~g~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~~-----~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s 279 (587)
|||++|++. +..|++++|+|+||++|++.+.+.... ..+.||||||||+|+ | ||||++|
T Consensus 159 ~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~~s 223 (445)
T TIGR01322 159 WYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLLFS 223 (445)
T ss_pred EEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEEEe
Confidence 999999876 456899999999999999998654332 235699999999998 5 7888887
Q ss_pred eCCC----------CeeeEEEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCC
Q 007857 280 LFSD----------KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQD 348 (587)
Q Consensus 280 ~~~~----------~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~ 348 (587)
.++. ..++|++|+||..+.+|++++. .+.+|+|+ |||||||.++ +|||||||||++|+...+
T Consensus 224 ~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~ 296 (445)
T TIGR01322 224 PQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYP 296 (445)
T ss_pred ccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCC
Confidence 6431 2468999999987779988643 46899999 9999999985 799999999999987767
Q ss_pred CCCCCcceeeeeeEEEEEecCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecCcccceeeEEEEEEcCccccccc
Q 007857 349 DIDKGWSGVQTVPRAIWLDKSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSGITASQVDVEIDFELPELEEAEL 428 (587)
Q Consensus 349 ~~~~gW~g~ltlPReL~l~~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~ 428 (587)
+.+.+|+|+|||||+|+|+ +| +|+|+|++||++||.+... ... ......+.+.. .+++|+++++..
T Consensus 297 ~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~~---~~~-~~~~~~~~~~~-~~~~l~~~~~~~------- 362 (445)
T TIGR01322 297 TDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEHI---NVF-GDQEHTLPGLN-GEFELILDLEKD------- 362 (445)
T ss_pred CccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCccc---ccc-ccccccccCCC-ceEEEEEEecCC-------
Confidence 7778999999999999997 67 6999999999999986542 011 11111222222 244444443211
Q ss_pred cCCCcCCcccccccccccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEEE
Q 007857 429 FDPAWVDPQQLCNDKNASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFVD 508 (587)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~~ 508 (587)
....+||.+ .+ ..+.+.|.|+..+ +.+ .+||++++.... +...+.
T Consensus 363 ---------------------~~~~~~l~~-~~--~~~~~~i~~~~~~---~~l---~~dr~~~~~~~~-----~~~~~~ 407 (445)
T TIGR01322 363 ---------------------SAFELGLAL-TN--KGEETLLTIDADE---GKV---TLDRRSSGNLED-----YGGTRS 407 (445)
T ss_pred ---------------------CccEEEEEE-eC--CCCeEEEEEECcC---CEE---EEEccCCCCcCC-----ccceEE
Confidence 113588888 44 3467999998643 444 458988863211 111222
Q ss_pred ecC-CCCeEEEEEEEeCceEEEEcCCCceEEEEEeecC
Q 007857 509 IDP-HHGKVSLRSLVDHSIVESFAARGKTCITTRVYPK 545 (587)
Q Consensus 509 ~~~-~~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~ 545 (587)
+.+ .++.++||||||+|+||||||||+.|||+||||.
T Consensus 408 ~~~~~~~~~~l~i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 408 CPLPNTKKVSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred EEcCCCCeEEEEEEEECCEEEEEECCCEEEEEEeccCC
Confidence 222 3478999999999999999999999999999994
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=3.4e-87 Score=727.59 Aligned_cols=421 Identities=45% Similarity=0.837 Sum_probs=322.8
Q ss_pred eecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccC
Q 007857 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (587)
Q Consensus 59 H~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~d 138 (587)
||+|+.||||||||++|++|+|||||||+|+++.|| +++||||+|+|||||+++|+||.|+.++|++|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g-~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~ 78 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWG-NIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-P 78 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCC-CeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999985 7
Q ss_pred CeEEEEEeeecCC------CceeE-EEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEe
Q 007857 139 DKPFILYTGIDAS------GQQVQ-NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (587)
Q Consensus 139 g~~~l~YTg~~~~------~~~~q-~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g 211 (587)
|++++||||+... ..+.| +.|.++|+ ++|+|+++||||.++++....+||||+|+|+ ++|+|||++|
T Consensus 79 ~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~-----~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g 152 (437)
T smart00640 79 GNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLG-----GTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIG 152 (437)
T ss_pred CceEEEEcCCcccccccCcccEEEEEEEECCCC-----CeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEE
Confidence 8899999997421 12333 44545554 8999998899997666666789999998777 3479999999
Q ss_pred eee-CCcceEEEEEeCCCCCCEEccccCcc--CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeE
Q 007857 212 GQI-DNEGMAFVYWSWDFIHWTKLDHPLYS--VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYY 288 (587)
Q Consensus 212 ~~~-~~~G~~~ly~S~Dl~~W~~~~~~~~~--~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y 288 (587)
++. +..|+++||+|+||++|++.+.++.. ...++||||||||+|+.+| .+.||||++|.++...++|
T Consensus 153 ~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y 222 (437)
T smart00640 153 ASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYY 222 (437)
T ss_pred EEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEE
Confidence 876 45799999999999999999876543 2345899999999998544 2359999999987678899
Q ss_pred EEEeecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCC-CCCCCCCCcceeeeeeEEEEE
Q 007857 289 VLGTYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDS-TQDDIDKGWSGVQTVPRAIWL 366 (587)
Q Consensus 289 ~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~-~~~~~~~gW~g~ltlPReL~l 366 (587)
++|+++++ .+|+|+.... ....+++|+|+ |||||||.+++++||||||||++|+. ....++.+|+|+|||||||+|
T Consensus 223 ~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l 300 (437)
T smart00640 223 FVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTL 300 (437)
T ss_pred EEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEE
Confidence 99999973 4798875421 12245899998 99999999864569999999999984 333344899999999999999
Q ss_pred e-cCCCeEEEcchHHHHhhhcCceeecceeecCcceEEecC--cccceeeEEEEEEcCccccccccCCCcCCcccccccc
Q 007857 367 D-KSGKQLVQWPVEEIETLRGKQVSIHDKELGSGSIVEVSG--ITASQVDVEIDFELPELEEAELFDPAWVDPQQLCNDK 443 (587)
Q Consensus 367 ~-~dg~~L~q~Pv~el~~Lr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (587)
+ ++| +|.|+|++||++||... ......+..+....+.. ..+.+++|+++++...
T Consensus 301 ~~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~--------------------- 357 (437)
T smart00640 301 DKTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS--------------------- 357 (437)
T ss_pred EecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCC---------------------
Confidence 5 566 79999999999999542 22222332222222211 2344566766665420
Q ss_pred cccccCccccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCC-CCcccceeEEEecCCCCeEEEEEEE
Q 007857 444 NASIQGRFGPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKED-LDKTTYGAFVDIDPHHGKVSLRSLV 522 (587)
Q Consensus 444 ~~~~~~~~~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~-~~~~~~~~~~~~~~~~~~~~Lrifv 522 (587)
.....+||.+++++|+++.+.|.|+..+ +. +.+||++++.... ...........+. .+++++|||||
T Consensus 358 -----~~~~~~~l~~~~~~~~~~~~~i~~~~~~---~~---l~vdR~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lri~v 425 (437)
T smart00640 358 -----GGAGPFGLLVLASEDLSEQTAVYFDVSK---GT---LCLDRRSSGTSNDEVFKGVRGATVPVD-PGETLSLRILV 425 (437)
T ss_pred -----CcceeEEEEEEeCCCCCceEEEEEEcCC---eE---EEEecCCCCCCcccccccceeeeeecC-CCCeEEEEEEE
Confidence 0113689999999888899999998643 43 3458876653110 0011111111221 24689999999
Q ss_pred eCceEEEEcCCC
Q 007857 523 DHSIVESFAARG 534 (587)
Q Consensus 523 D~S~vEvFvNdG 534 (587)
|+||||||||||
T Consensus 426 D~ssvEvf~ndG 437 (437)
T smart00640 426 DHSSVEIFANGG 437 (437)
T ss_pred eceEEEEEeCCC
Confidence 999999999987
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=1.1e-76 Score=618.10 Aligned_cols=299 Identities=43% Similarity=0.856 Sum_probs=248.9
Q ss_pred eecCCCCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccC
Q 007857 59 HFRPPQNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (587)
Q Consensus 59 H~~p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~d 138 (587)
||+|+.||||||||++|++|+|||||||||+++.|| +++||||+|+|||||+++|+||.|+.++|++|||||||+++ +
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g-~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~ 78 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWG-NMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-D 78 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS--SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-T
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccc-eeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-C
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999995 6
Q ss_pred CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeec-CCcEEcC-CCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFS-GNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~-~nPvi~~-p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+++++||||+.....+.|++|+|+|.+ ++|+|++ +||||.. |.+ ...+||||+|+|++ +++|+|++|++...
T Consensus 79 ~~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 79 DNLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDG 152 (308)
T ss_dssp TCEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEEC-TTEEEEEEEEEETT
T ss_pred CEEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEec-CCEEEEEEeccccC
Confidence 799999999987668999999996654 8999998 4999975 444 68999999988985 69999999999888
Q ss_pred cceEEEEEeCCCCCCEEccccCccCC-CCCccccCeEEEeccCCccceeeccCCCCceeEEEEee----CCCCeeeEEEE
Q 007857 217 EGMAFVYWSWDFIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL----FSDKHDYYVLG 291 (587)
Q Consensus 217 ~G~~~ly~S~Dl~~W~~~~~~~~~~~-~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~----~~~~~~~Y~vG 291 (587)
.|++++|+|+||++|++.+.+..... .++||||||||+|+..|. + ....+|||++|. .....+.|++|
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-~------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-G------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-S------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-c------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999987665433 478999999999995421 0 012367999998 34578999999
Q ss_pred eecCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCC-CCCCCCCcceeeeeeEEEEEecC
Q 007857 292 TYDPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDST-QDDIDKGWSGVQTVPRAIWLDKS 369 (587)
Q Consensus 292 ~~d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~-~~~~~~gW~g~ltlPReL~l~~d 369 (587)
+||..+.+|+++.. ..+++|+|+ |||+|+|.++.++||||||||++++.. ....+.+|+|+|||||||+|+++
T Consensus 226 ~~d~~~~~f~~~~~-----~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDDS-----SFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESST-----TSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeecc-----ccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 99776679987621 367999999 999999999754599999999999875 23336899999999999999754
Q ss_pred CCeEEEcc
Q 007857 370 GKQLVQWP 377 (587)
Q Consensus 370 g~~L~q~P 377 (587)
+++|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 45799998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=4e-68 Score=550.90 Aligned_cols=286 Identities=40% Similarity=0.788 Sum_probs=246.9
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
||||||||++|++|+||||||++|.++.|| +++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~-~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~ 79 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWG-NMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLF 79 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCC-CcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEE
Confidence 899999999999999999999999999999 9999999999999999999999998888999999999998644999999
Q ss_pred EeeecC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCcceE
Q 007857 145 YTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (587)
Q Consensus 145 YTg~~~---~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~G~~ 220 (587)
|||+.. .+.+.|++|+|+|.+ ++|+|...+|++.+ +.....+||||+|+|. +|+|||++|++. +..|++
T Consensus 80 YTg~~~~~~~~~~~~~lA~S~ddg----~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i 152 (298)
T cd08996 80 YTGNVKLDGGRRQTQCLAYSTDDG----RTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRI 152 (298)
T ss_pred EeceeCCCCCceEEEEEEEEcCCC----CEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEE
Confidence 999864 467999999998533 89999988998863 3345689999997665 499999999976 356889
Q ss_pred EEEEeCCCCCCEEccccC-ccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCC------CeeeEEEEee
Q 007857 221 FVYWSWDFIHWTKLDHPL-YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD------KHDYYVLGTY 293 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~~-~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~------~~~~Y~vG~~ 293 (587)
.+|+|+||++|++.+.+. .....+.|||||+||+|+++| ||||++|.+.. ..+.|++|++
T Consensus 153 ~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~~-------------k~vL~~s~~~~~~~~~~~~~~y~~G~~ 219 (298)
T cd08996 153 LLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVEG-------------KWVLIFSPQGLEPEGNGSGTGYLVGDF 219 (298)
T ss_pred EEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCCC-------------eEEEEECCCCCCCCCCccceEEEEEEE
Confidence 999999999999987542 233456799999999998422 99999998643 4579999999
Q ss_pred cCCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEecCCCe
Q 007857 294 DPQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGKQ 372 (587)
Q Consensus 294 d~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~dg~~ 372 (587)
++. .|+++.. ..+.+|+|+ |||||+|.++ ++||||||||++++...+..+.+|+|+|||||+|+|++++ +
T Consensus 220 ~~~--~~~~~~~-----~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~-~ 290 (298)
T cd08996 220 DGT--TFTFDHT-----EFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG-R 290 (298)
T ss_pred ECC--CCeEecC-----CceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-E
Confidence 986 5665421 257899998 9999999986 7999999999999988788899999999999999998755 7
Q ss_pred EEEcchHH
Q 007857 373 LVQWPVEE 380 (587)
Q Consensus 373 L~q~Pv~e 380 (587)
|.|+|++|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999975
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=5.3e-56 Score=456.32 Aligned_cols=267 Identities=25% Similarity=0.446 Sum_probs=223.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCC--CCCceEEEEEeCCCcccEeccCCCCC-CCccCCCCeEeeeEEEccCCeEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLINWIHLSHALCP-SGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~--g~~~~Wgha~S~Dlv~W~~~~~al~P-~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
.||. ++|++|+||||||++|.++.| + +++||||+|+||+||+++++||.| +..++..|||||||++ .+|+++||
T Consensus 1 ~d~~-~~~~~G~yhlfyq~~p~~~~~~~~-~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~ 77 (280)
T cd08995 1 GDPM-PFYDDGTFHIFYLHDPRNGPPEGL-RHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAF 77 (280)
T ss_pred CCcc-ceEECCEEEEEEEcCCCCCCcccC-CceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEE
Confidence 4887 999999999999999999988 8 999999999999999999999988 4567789999999998 48999999
Q ss_pred EeeecC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----CCc
Q 007857 145 YTGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNE 217 (587)
Q Consensus 145 YTg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~~~ 217 (587)
|||+.. ...+.|++|+|+|+ ++|+|...+||+.++.++...+||||+|+|.+.+|+|||+++++. +..
T Consensus 78 YTg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~ 152 (280)
T cd08995 78 YTGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRR 152 (280)
T ss_pred EEEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCC
Confidence 999864 25678999999986 799998778999755555567899999776644799999999875 456
Q ss_pred ceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC-CCeeeEEEEeecCC
Q 007857 218 GMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYDPQ 296 (587)
Q Consensus 218 G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d~~ 296 (587)
|++.+|+|+||++|++.+. +.....+.|||||++|+++ | +|||++|.+. .....|++|+..
T Consensus 153 g~i~~~~S~Dl~~W~~~~~-~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~-- 214 (280)
T cd08995 153 GCIALFTSKDLKNWEYEEP-FYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP-- 214 (280)
T ss_pred eEEEEEEeCCcCcceecCc-eecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC--
Confidence 8899999999999999874 4434446799999999998 6 8999999753 356789999622
Q ss_pred CCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEEEecCCC
Q 007857 297 MDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIWLDKSGK 371 (587)
Q Consensus 297 ~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~l~~dg~ 371 (587)
.+.|.... ...+| |+ |||||||.++ |||||||||++++...++.+.+|+|+|| ||||.+.+||.
T Consensus 215 ~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 215 FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 13554322 23589 99 9999999985 9999999999999887888899999998 68888877773
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=3.9e-39 Score=328.68 Aligned_cols=244 Identities=28% Similarity=0.382 Sum_probs=194.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCC--CCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al--~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
-||+++. |+||||||++|.++.|+...+|+||+|+||+||++.+.+| .|...+|..||++|+++...+|+++|||
T Consensus 7 ~~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Y 83 (276)
T cd08979 7 FNPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFY 83 (276)
T ss_pred cCCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEE
Confidence 3566444 8999999999998776525668999999999999999888 5667788899999999986449999999
Q ss_pred eeecC--CCceeEEEEEecCCCCCccceeeeecCCcEE-----cCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCc
Q 007857 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-----TPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNE 217 (587)
Q Consensus 146 Tg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi-----~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~ 217 (587)
|+... ...+.|++|+|+|+ ++|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..
T Consensus 84 t~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~ 158 (276)
T cd08979 84 TGYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADER 158 (276)
T ss_pred ecccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCC
Confidence 99863 46788999999996 799998767753 222334457899999776633499999999875 346
Q ss_pred ceEEEEEeCCCCCCEEcccc--CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC-CCeeeEEEEeec
Q 007857 218 GMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS-DKHDYYVLGTYD 294 (587)
Q Consensus 218 G~~~ly~S~Dl~~W~~~~~~--~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~-~~~~~Y~vG~~d 294 (587)
+++.+|+|+|+++|++.+.+ ........+||||++|+++ | +|+|+++... ...+.|.+|.++
T Consensus 159 ~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~~ 223 (276)
T cd08979 159 GAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTAL 223 (276)
T ss_pred cEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEecc
Confidence 78999999999999998754 2222345799999999998 6 8999998764 456889999987
Q ss_pred CCCCeeccCCCCCCCCCceecccCC-CcccceEecCCCCcEEEEEeccCC
Q 007857 295 PQMDIFSPDTDFHGNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANES 343 (587)
Q Consensus 295 ~~~~~F~~~~~~~~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~ 343 (587)
.. .|.|.. ...+|.|. |||+|++.+.+++|++++|||+++
T Consensus 224 ~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 224 FG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred cC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 64 555542 34689999 999999987546999999999987
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=3.3e-36 Score=307.58 Aligned_cols=269 Identities=28% Similarity=0.440 Sum_probs=206.9
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeeeEEEccCCeEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
|||+ +++++|+||||||++|.+ + .++|+|++|+||+||++++.+|. |..+++..++|+|+++...+|+++|
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~-~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l 75 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---G-NPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYL 75 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---C-CceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEE
Confidence 7999 999999999999999875 5 78999999999999999998884 6677778899999999864499999
Q ss_pred EEeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcC-CCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCcceE
Q 007857 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEGMA 220 (587)
Q Consensus 144 ~YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~-p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~G~~ 220 (587)
+||+... ...+.+++|+|+|+. ..|++...+||+.. +.......+|||+|++. ++|+|||++++.. ...+.+
T Consensus 76 ~yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d-~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 76 YYTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEEc-CCCCEEEEEccccCCCCCeE
Confidence 9999753 356889999999874 35666555666642 33334578999996544 5699999998764 235678
Q ss_pred EEEEeCCCCCCEEcccc--CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC------CCeeeEEEEe
Q 007857 221 FVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS------DKHDYYVLGT 292 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~------~~~~~Y~vG~ 292 (587)
.+++|+|+.+|+..+.+ ........++|||++|+++ | +|+|++|... .....|.+++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999887643 1223346799999999998 6 8999998754 3456777776
Q ss_pred ecCCCCeeccCCCCC-CCCCceecccCC-CcccceEecCCCCcEEEEEeccCCCCCCCCCCCCcceeeeeeEEEE
Q 007857 293 YDPQMDIFSPDTDFH-GNSNDLRYDYGK-FYASKTFFDSAKNRRVLWAWANESDSTQDDIDKGWSGVQTVPRAIW 365 (587)
Q Consensus 293 ~d~~~~~F~~~~~~~-~~~~~~~lD~G~-fYA~qt~~d~~~grri~~gW~~~~~~~~~~~~~gW~g~ltlPReL~ 365 (587)
.+. +.|.+..... ........|.+. +||++.|.++ +||++|++|+.+++.... ...+|.++|+|||+|.
T Consensus 216 ~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SDT--GPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CCC--CCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 543 4665543210 000123467777 9999999986 799999999999876444 5689999999999873
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.94 E-value=1.6e-25 Score=233.89 Aligned_cols=195 Identities=22% Similarity=0.227 Sum_probs=137.3
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 68 nDPnG~~~-~~G~YHlfyQ~~P~~----~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
-|..|-+. ++|..-+|+..-|.. +.|+ .+||||++|+||+||++.+ +|.|+..+|..|||||||++..||+++
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~-~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~ 85 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHG-DARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQ 85 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcC-ceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEE
Confidence 46666444 688533888766543 5788 9999999999999999955 477889999999999999986679999
Q ss_pred EEEeeecC----CCceeEEEEEecCCCC-CccceeeeecCCcEEcCC--------------CCCCCCCccCCeEEeecCC
Q 007857 143 ILYTGIDA----SGQQVQNLAMPENLSD-PLLKDWVKFSGNPVMTPP--------------NGVKDDMFRDPTTAWQAPD 203 (587)
Q Consensus 143 l~YTg~~~----~~~~~q~~A~s~D~~d-~~l~~w~k~~~nPvi~~p--------------~~~~~~~fRDP~V~w~~~~ 203 (587)
|||||+.+ .+...|++|.+.+... --++.|.+ ..+++.++ +.....+||||+|+..+++
T Consensus 86 lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~--~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 86 LFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFED--HHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEEeccccCCCCCCCceEEEEEEECCCcceEecccCc--cceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 99999853 2457788887654310 00122322 23444321 1123578999996554347
Q ss_pred CeEEEEEeeeeC-C---------------------------cceEEEE--EeCCCCCCEEccccCccCCCCCccccCeEE
Q 007857 204 GRWRVLVGGQID-N---------------------------EGMAFVY--WSWDFIHWTKLDHPLYSVQETGMWECPDIF 253 (587)
Q Consensus 204 g~~~m~~g~~~~-~---------------------------~G~~~ly--~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf 253 (587)
|+|||+++++.. . .|+|.+. +|+||.+|++.++++.+..-...||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999988652 2 2555555 678999999997544322223479999999
Q ss_pred EeccCCccceeeccCCCCceeEEEEeeC
Q 007857 254 PVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 254 ~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+++ | ||+|++|..
T Consensus 244 ~~~--g-------------k~yL~~s~~ 256 (349)
T cd08997 244 FHN--G-------------KYYLFTISH 256 (349)
T ss_pred EEC--C-------------EEEEEEeCC
Confidence 998 6 999998853
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.90 E-value=1.4e-22 Score=209.59 Aligned_cols=190 Identities=20% Similarity=0.303 Sum_probs=140.7
Q ss_pred eeecCCCCCccCCCcceEEC-CEEEEEEEECCCCCC---CCCCceEEEEEeCCCc-ccEeccCCCCCC--CccCCCCeEe
Q 007857 58 YHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLI-NWIHLSHALCPS--GPYDINSCWS 130 (587)
Q Consensus 58 yH~~p~~gw~nDPnG~~~~~-G~YHlfyQ~~P~~~~---~g~~~~Wgha~S~Dlv-~W~~~~~al~P~--~~~d~~Gv~S 130 (587)
.+|..+..++-+|. +++.+ |+||||||..|.+.. |-....||||+|+|+. +|+..+++|.|+ ..||+.++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46778888889998 77754 799999999887643 2113569999999987 899999999887 5688899999
Q ss_pred eeEEEccCCeEEEEEeeecC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcC-CC-----------------
Q 007857 131 GSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP-PN----------------- 185 (587)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~-------~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~-p~----------------- 185 (587)
++++. .+|+++||||+... ...+.+++|+|++.. ..|++. .+||+.+ +.
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99988 48999999998753 134567778776631 256553 3444421 00
Q ss_pred -------------------------------------------CCCCCCccCCeEEeecCCCeEEEEEeeeeC----Ccc
Q 007857 186 -------------------------------------------GVKDDMFRDPTTAWQAPDGRWRVLVGGQID----NEG 218 (587)
Q Consensus 186 -------------------------------------------~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~----~~G 218 (587)
.....++|||+ ||+ .+|+|||+++++.. ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 01234679999 566 46999999998752 467
Q ss_pred eEEEEEeCCCCCCEEccccCc------cC---CCCCccccCeEE-Eec
Q 007857 219 MAFVYWSWDFIHWTKLDHPLY------SV---QETGMWECPDIF-PVS 256 (587)
Q Consensus 219 ~~~ly~S~Dl~~W~~~~~~~~------~~---~~~~~wECPdlf-~l~ 256 (587)
++.+|+|+|+.+|++.+.+.. .. ...+|||||++| +.+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 899999999999999876532 11 135799999999 777
No 12
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.83 E-value=3.1e-19 Score=185.11 Aligned_cols=161 Identities=20% Similarity=0.298 Sum_probs=124.4
Q ss_pred cCCCcceEECCEEEEEEEECCCCC--CCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGP--LFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~--~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
.+|. +++++|+||||||++|..+ .++ .++|+||+|+||++|++.++++.+ ..++++++++.+.+|+++|+|
T Consensus 80 WAP~-v~~~~G~y~myys~~~~~~~~~~~-~~~i~~a~S~Dl~~w~~~~~~~~~-----~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 80 WAPE-VVWHGGVYHMYVTYIPGVPPDWGG-PRRIVHYTSPNLWDWTFVGRVDLD-----SDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eCce-EEEECCEEEEEEEecCCCCcccCC-CcEEEEEECCCcCcceECCccccC-----CCCcEEeEEEEeCCCEEEEEE
Confidence 4687 8999999999999998753 334 789999999999999998876322 357899999986669999999
Q ss_pred eeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEe
Q 007857 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (587)
Q Consensus 146 Tg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S 225 (587)
|+.. ..+.+++|.|+|+ .+|++. .+++.. ...++|+| |+ .+|+|||+++. ..| +.+|+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~~S 211 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV-FR-WKGYYWMIIDE---WKG-LGVYRS 211 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe-eE-ECCEEEEEEcC---Cce-EEEEEC
Confidence 9753 3456689999886 799984 466642 23479995 45 47999999854 234 679999
Q ss_pred CCCCCCEEccccCccC----CCCCccccCeEEEec
Q 007857 226 WDFIHWTKLDHPLYSV----QETGMWECPDIFPVS 256 (587)
Q Consensus 226 ~Dl~~W~~~~~~~~~~----~~~~~wECPdlf~l~ 256 (587)
+|+.+|++.+.++... ....+++||++|+.+
T Consensus 212 ~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 212 KDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred CChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 9999999998766432 124478999999876
No 13
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.83 E-value=2.4e-19 Score=183.98 Aligned_cols=191 Identities=19% Similarity=0.237 Sum_probs=140.4
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCC-CccCCCCeEeeeEEEccCCeEE
Q 007857 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPS-GPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~-~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
.||.+||+ +++++|+||||++..+.+. . ..+|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+++
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~-~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy 79 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--E-QTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYY 79 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--C-eeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEE
Confidence 46899999 6889999999998765432 2 4689999999999999999988764 456677899999987 589999
Q ss_pred EEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEE
Q 007857 143 ILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFV 222 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~l 222 (587)
|+||+. +.+++|+|+|.. -.|++..++|++.... .....+||.|+ .+++|+|||++++. +.+.+
T Consensus 80 ~yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf-~d~dG~~yl~~~~~----~~~~i 143 (275)
T cd09004 80 FYFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVF-IDDDGQAYLYWGGW----GHCNV 143 (275)
T ss_pred EEEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeE-ECCCCCEEEEEcCc----CCEEE
Confidence 999986 457899998863 3677744678875432 23678999965 44689999999874 22233
Q ss_pred E-EeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEE
Q 007857 223 Y-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (587)
Q Consensus 223 y-~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (587)
. -|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.+|
T Consensus 144 ~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 144 AKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 3 478898886543222 12234589999999987 6 8899998754332345554
No 14
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.81 E-value=6.8e-19 Score=180.05 Aligned_cols=147 Identities=15% Similarity=0.242 Sum_probs=115.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCC--CCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCP--SGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P--~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
|| |+++++|+||||||.++.. + .++||||+|+|++||++.+ +.|.| +..++..||++++++. .+|+++|+|
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~-~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Y 75 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---G-VIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITY 75 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---C-ceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEE
Confidence 67 5899999999999987643 4 7899999999999999875 34666 5677888999999987 599999999
Q ss_pred eeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEee-cCCCeEEEEEeeee---CCcceE
Q 007857 146 TGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ-APDGRWRVLVGGQI---DNEGMA 220 (587)
Q Consensus 146 Tg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~-~~~g~~~m~~g~~~---~~~G~~ 220 (587)
|+... ...+++++|.|+|+ ++|+|.. .+ +. ...||+.+ |. ..+|+|+|++.... +..+.+
T Consensus 76 ta~~~~~~~~~i~lA~S~D~-----~~W~~~~-~~-~~-------~~~~d~~~-~p~~~~g~y~m~~r~~~~~~~~~~~I 140 (268)
T cd08993 76 AARPNAPNGTRIGLATTKDF-----ITFERLG-TS-LV-------PNNRDGIL-FPEKINGKYVMLHRPFEYGGTSPPDM 140 (268)
T ss_pred EccCCCCCCcEEEEEEeCCc-----ceEEEec-cc-CC-------CCCCCEEE-eeEEECCEEEEEEccccCCCCCCCcE
Confidence 99763 35678999999986 7999973 21 11 12478884 43 24899999996432 245679
Q ss_pred EEEEeCCCCCCEEccc
Q 007857 221 FVYWSWDFIHWTKLDH 236 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~ 236 (587)
.+++|+||.+|+..+.
T Consensus 141 ~lA~S~Dl~~W~~~~~ 156 (268)
T cd08993 141 WLSFSPDLVHWGNHRF 156 (268)
T ss_pred EEEECCCcCccCCCeE
Confidence 9999999999987654
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.76 E-value=4.4e-17 Score=167.83 Aligned_cols=196 Identities=20% Similarity=0.215 Sum_probs=136.5
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-cCCCCeEeeeEEEccCCeEEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-YDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-~d~~Gv~SGsav~~~dg~~~l 143 (587)
+..-||. +++++|+|+||+...+ ..+|++++|+||+||+..+.+|.+... .+..++|.+.++. .+|+++|
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~-------~~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~ 76 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGN-------GPNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVL 76 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCC-------CCcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEE
Confidence 4567998 8889999999998543 257999999999999999988877654 4456788888876 5899999
Q ss_pred EEeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc---e
Q 007857 144 LYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG---M 219 (587)
Q Consensus 144 ~YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G---~ 219 (587)
+|++... ...+.+++|+|+|.. -.|++.. .+++..+. .....+||.|+ .+++|+|||+++......| .
T Consensus 77 ~y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~--~~~~~~Dp~v~-~d~dG~~Yl~~~~~~~~~~~~~~ 148 (287)
T cd08999 77 YYSARDKGSGGQCIGVATADSPL----GPFTDHG-KPPLCCPE--GEGGAIDPSFF-TDTDGKRYLVWKSDGNSIGKPTP 148 (287)
T ss_pred EEEeecCCCCCEEEEEEECCCCC----CCCccCC-cceEecCC--CCCCccCCCeE-ECCCCCEEEEEeccCCCCCCCce
Confidence 9999864 245667889987753 3688753 33443222 23568999965 4468999999987542212 1
Q ss_pred EEEE-EeCCCCCCEEccccCccC---CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCe--eeEEEEe
Q 007857 220 AFVY-WSWDFIHWTKLDHPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKH--DYYVLGT 292 (587)
Q Consensus 220 ~~ly-~S~Dl~~W~~~~~~~~~~---~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~--~~Y~vG~ 292 (587)
+.+. .|+|+.+|......+... ....++|||.+|+.+ | +++|++|...... ..|.+|-
T Consensus 149 i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~~~~~~~~y~i~~ 212 (287)
T cd08999 149 IYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGGCCSGASTYAVGV 212 (287)
T ss_pred EEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCCccCCCCCEEEEE
Confidence 3333 368998886443222111 134589999999997 6 8999998743222 2466653
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.73 E-value=2.2e-16 Score=162.03 Aligned_cols=195 Identities=18% Similarity=0.238 Sum_probs=140.5
Q ss_pred CCCcceEECCEEEEEEEECCCCCC---CCCCceEEEEEeCCCcccEeccCCCCCCC-c-cCCCCeEeeeEEEccCCeEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPL---FGDKMIWAHSVSYDLINWIHLSHALCPSG-P-YDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~---~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~-~d~~Gv~SGsav~~~dg~~~l 143 (587)
||. +++++|+||||.......+. +. ...|..++|+||+||+..+.+|.+.. . ++..++|.++++. .+|+++|
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~-~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~ 78 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFC-MNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYL 78 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccc-cceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEE
Confidence 898 88889999999987644432 23 35699999999999999999887543 2 6678999999987 5999999
Q ss_pred EEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEE
Q 007857 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (587)
Q Consensus 144 ~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly 223 (587)
||++......+.+++|+|+|.. -.|+.....|++... ......+||.|+ .+++|++||+++.. .+....-
T Consensus 79 yy~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~~~~~~iDp~vf-~d~dG~~yl~~~~~---~~~~~~~ 148 (274)
T cd08990 79 YFPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--SGGWYSIDPAVF-IDDDGQAYLYWGGG---LGLRVAK 148 (274)
T ss_pred EEEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--CCCCCccCCcEE-ECCCCCEEEEECCc---CCEEEEE
Confidence 9998754345677899998753 368876545555422 123577899954 44689999999864 2333344
Q ss_pred EeCCCCCCEEccccCcc-----CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEE
Q 007857 224 WSWDFIHWTKLDHPLYS-----VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLG 291 (587)
Q Consensus 224 ~S~Dl~~W~~~~~~~~~-----~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG 291 (587)
.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|.+......|.+.
T Consensus 149 l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 149 LKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred eCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 67899999754432321 1224578999999997 6 8999999865455556554
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.68 E-value=3e-15 Score=152.03 Aligned_cols=191 Identities=21% Similarity=0.212 Sum_probs=132.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
||. +++++|+||||+..... . ...+..++|+||++|+..+.+|. +....+..++|.++++. .+|+++|+
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~-~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ 74 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----A-GPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLY 74 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----C-CCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEE
Confidence 898 88999999999987643 2 35689999999999999998875 34445567899999987 58999999
Q ss_pred EeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC--CcceEE
Q 007857 145 YTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMAF 221 (587)
Q Consensus 145 YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--~~G~~~ 221 (587)
|++... ...+.+++|+|+|. ..|.+... ...+ .......+||.|++. ++|++||+.+.... ..+.+.
T Consensus 75 y~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~-~~~~~~~iDp~vf~d-~dg~~yl~~~~~~~~~~~~~i~ 144 (271)
T cd08978 75 YSVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPP-TSNNGNSIDPTVFKD-DDGKYYLYYGSGDPGAGFGGIY 144 (271)
T ss_pred EEcccCCCCcccEEEEECCCC-----CCCccccc---cCcC-ccCCCCccCcceEEc-CCCCEEEEEecccCCCCCCcEE
Confidence 999743 23567889999886 45554321 1111 112357899996544 56999999987542 245678
Q ss_pred EEEeCCCCCCEEccccC---ccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEEe
Q 007857 222 VYWSWDFIHWTKLDHPL---YSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (587)
Q Consensus 222 ly~S~Dl~~W~~~~~~~---~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (587)
+.++++...|.. +.+. .......+.|||.+|+.+ | +|+|++|........|.++-
T Consensus 145 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~~ 202 (271)
T cd08978 145 ISELTDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIGY 202 (271)
T ss_pred EEEECccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEEE
Confidence 888876544432 1221 112234589999999987 6 89999887543223455553
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.62 E-value=2.7e-14 Score=147.84 Aligned_cols=180 Identities=16% Similarity=0.139 Sum_probs=126.2
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC-ccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
.||. +++++|+||||+..... ...+.+++|+||+||+.++.+|.+.. .++..++|.++++. .+|+++|+|+
T Consensus 1 ~DP~-v~~~~g~yyl~~t~~~~------~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys 72 (294)
T cd08991 1 ADPF-VLRYNGKYYAYGTGGAD------GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYS 72 (294)
T ss_pred CCCe-EEEECCEEEEEEeCCCC------CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEE
Confidence 3898 88999999999876532 13588999999999999998887654 36778999999987 5899999999
Q ss_pred eecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC---cceEEE
Q 007857 147 GIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN---EGMAFV 222 (587)
Q Consensus 147 g~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~---~G~~~l 222 (587)
+.... ..+.+++|+|+|.. -.|++... +.+.. ....+||.+++. .+|+|||+++..... .+....
T Consensus 73 ~~~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~-----~~~~iD~~vf~d-~dG~~yl~~~~~~~~~~~~~i~~~ 141 (294)
T cd08991 73 ANDRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDF-----EPKSIDAHPFID-DDGKPYLYYSRNNYGNRVSDIYGT 141 (294)
T ss_pred eccCCCCcceEEEEEeCCCC----CCCCcCCC-CcccC-----CCcccCCceEEC-CCCCEEEEEEecCCCCcccceEEE
Confidence 87543 55778899998753 35776432 22221 135679996544 679999999764321 233333
Q ss_pred EEeCCCCCCEEccc----cCcc--------------CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 223 YWSWDFIHWTKLDH----PLYS--------------VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 223 y~S~Dl~~W~~~~~----~~~~--------------~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
--|.|+.+|..... +... .....+.|+|.+++.+ | +|+|++|..
T Consensus 142 ~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~ 203 (294)
T cd08991 142 ELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSAN 203 (294)
T ss_pred EEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECC
Confidence 35788877742111 1110 0123478999999997 6 899998864
No 19
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.59 E-value=4.5e-14 Score=147.99 Aligned_cols=170 Identities=18% Similarity=0.251 Sum_probs=122.5
Q ss_pred cceeecCCCCCc-cCCCcceEECCEEEEEEEECCC-----------CC--CCCCCceEEEEEeCCCcccEeccCCCCCC-
Q 007857 56 TSYHFRPPQNWI-NDPNGPMYYKGVYHLFYQYNPL-----------GP--LFGDKMIWAHSVSYDLINWIHLSHALCPS- 120 (587)
Q Consensus 56 p~yH~~p~~gw~-nDPnG~~~~~G~YHlfyQ~~P~-----------~~--~~g~~~~Wgha~S~Dlv~W~~~~~al~P~- 120 (587)
|..=+.+..+.. .||..+++.+|+|||||++... .+ .|. ....+||+|+||+||++.+++|.+.
T Consensus 25 p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~-~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 25 PKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWD-KCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred cccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCC-ceEEEEEECCCCCCceECCccccCCC
Confidence 444444444443 6998899999999999996531 11 245 6788999999999999999888754
Q ss_pred -CccCCCCeEeeeEEEccCCeEEEEEeeecCC----CceeEEEEEecCCCCCccceeeeecCCcEEcCC-----------
Q 007857 121 -GPYDINSCWSGSVTILPGDKPFILYTGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP----------- 184 (587)
Q Consensus 121 -~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p----------- 184 (587)
..||..++|.++++. .+|+++|||++.... ..+.+++|+|++.. -.|++. .+||+.+.
T Consensus 104 ~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 358999999999986 699999999975421 23567899998763 259886 68998542
Q ss_pred -------CCCCCCCccCCeEEeecCCCeEEEEEeeeeC--------CcceEEEEEeCCCC-CCEEc
Q 007857 185 -------NGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--------NEGMAFVYWSWDFI-HWTKL 234 (587)
Q Consensus 185 -------~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--------~~G~~~ly~S~Dl~-~W~~~ 234 (587)
+.++...+.||.|+. .+|+|||++.+... ..-++.+..|+++. -|+..
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~ 241 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKS 241 (349)
T ss_pred eeEeccCCCcccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeC
Confidence 124556678999654 47999999966431 11247788888865 57654
No 20
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.59 E-value=9.7e-14 Score=143.43 Aligned_cols=189 Identities=21% Similarity=0.226 Sum_probs=127.4
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-------cCCCCeEeeeEEEccCC
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILPGD 139 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~d~~Gv~SGsav~~~dg 139 (587)
+.||. +++++|+||||+... ++++++|+||+||++.+.+|.+... ....++|.+.++. .+|
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~----------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g 68 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN----------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNG 68 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC----------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECC
Confidence 36998 899999999998753 4899999999999999988865432 3456799999987 599
Q ss_pred eEEEEEeeecCC-CceeEEEEEecCC-CCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCc
Q 007857 140 KPFILYTGIDAS-GQQVQNLAMPENL-SDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNE 217 (587)
Q Consensus 140 ~~~l~YTg~~~~-~~~~q~~A~s~D~-~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~ 217 (587)
+++|||++.... ....+++|+|+|. . ..|++. +||+....+......+||.|+.. ++|++||++++.. .
T Consensus 69 ~yyl~ys~~~~~~~~~~i~va~s~~~~~----gpw~~~--~~v~~~~~~~~~~~~iDp~vf~d-~dG~~Yl~~~~~~--~ 139 (288)
T cd08998 69 KYYLYYSVSTFGSNRSAIGLATSDTLPD----GPWTDH--GIVIESGPGRDDPNAIDPNVFYD-EDGKLWLSFGSFW--G 139 (288)
T ss_pred EEEEEEEEEeCCCCceEEEEEEeCCCCC----CCCEEc--ceeeecCCCCCCcccccCCEEEc-CCCCEEEEeeecc--C
Confidence 999999987543 4566789999875 2 379874 58886433223457889996544 6899999998642 1
Q ss_pred ceEEEEE-eCC---CCCCEEccccCccCC-CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCC---eeeEE
Q 007857 218 GMAFVYW-SWD---FIHWTKLDHPLYSVQ-ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDK---HDYYV 289 (587)
Q Consensus 218 G~~~ly~-S~D---l~~W~~~~~~~~~~~-~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~---~~~Y~ 289 (587)
| +.+.+ ++| ...|......+.... .....|-|.+|+-+ | +++|++|..... ...|.
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~~~~~~~~~~y~ 203 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYGGCCAGEDSTYN 203 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcchhcCCCCCceE
Confidence 2 22222 222 223321111111111 23468999999987 6 889988854222 24455
Q ss_pred EEe
Q 007857 290 LGT 292 (587)
Q Consensus 290 vG~ 292 (587)
++-
T Consensus 204 v~~ 206 (288)
T cd08998 204 IRV 206 (288)
T ss_pred EEE
Confidence 543
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.56 E-value=2.4e-13 Score=141.05 Aligned_cols=170 Identities=23% Similarity=0.281 Sum_probs=120.5
Q ss_pred ccCCCcceEE--CCEEEEEEEE-C---CCC-CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccC
Q 007857 67 INDPNGPMYY--KGVYHLFYQY-N---PLG-PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPG 138 (587)
Q Consensus 67 ~nDPnG~~~~--~G~YHlfyQ~-~---P~~-~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~d 138 (587)
.-||. +++. +|+|||||.. . |.. ..|.....+|+|+|+| |+||++++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 68998 8887 8899999952 1 111 2344246799999999 99999998777664455556799999987 59
Q ss_pred CeEEEEEeeecC-----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 139 DKPFILYTGIDA-----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 139 g~~~l~YTg~~~-----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
|+++|||+.... ......++|+|+|. .+|+..+ ++.. + .....||.|+ +..+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl-----~~w~~~~--~~~~-~----~~~~iD~~vf-~~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPNL-----WDWTFVG--RVDL-D----SDRVIDACVF-KLPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCCc-----CcceECC--cccc-C----CCCcEEeEEE-EeCCCEEEEEEECC
Confidence 999999997532 12356788999885 6898753 3321 1 1346799965 43579999999653
Q ss_pred eCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 214 IDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 214 ~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
.. ...+.+..|+|+.+|+..+..+ . ...-|+|.+|+.+
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i-~---~~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVL-G---DRPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCccc-c---CCCCCCCCeeEEC
Confidence 22 2235677899999999765332 2 1234999999987
No 22
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.51 E-value=3.6e-12 Score=130.38 Aligned_cols=190 Identities=18% Similarity=0.094 Sum_probs=130.6
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC----ccCCCCeEeeeEEEcc-CCeEE
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG----PYDINSCWSGSVTILP-GDKPF 142 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~----~~d~~Gv~SGsav~~~-dg~~~ 142 (587)
.||. +++++|+||+|-.....+..+ ...|...+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++
T Consensus 4 h~~~-i~~~~~~yY~ygs~~~~~~~~--~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~ 80 (265)
T cd08985 4 HGGG-ILKVGGTYYWYGENKGGGDTA--FGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYV 80 (265)
T ss_pred ccCc-eEEECCEEEEEEEecCCCCcc--cccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEE
Confidence 3554 899999999998765432111 34688999999999999999998764 3344578999998743 58999
Q ss_pred EEEeeecC-CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEE
Q 007857 143 ILYTGIDA-SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAF 221 (587)
Q Consensus 143 l~YTg~~~-~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ 221 (587)
|+|++... .....+++|+|++.. -.|+... .+. +. ....|||.|+++ ++|++||++++..+ ..+.
T Consensus 81 m~~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~---~~~~~Dp~vf~D-dDG~~Yl~~~~~~~--~~i~ 146 (265)
T cd08985 81 MWMHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PL---GYQSRDFGLFVD-DDGTAYLLYSDRDN--SDLY 146 (265)
T ss_pred EEEEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CC---CCCccCCceEEc-CCCCEEEEEecCCC--CceE
Confidence 99998643 245578899997753 2466432 221 21 246799996554 78999999987532 2345
Q ss_pred EEE-eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC---CCeeeEEEEe
Q 007857 222 VYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS---DKHDYYVLGT 292 (587)
Q Consensus 222 ly~-S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~---~~~~~Y~vG~ 292 (587)
+.+ ++|++.+... +.. .......|||.+|+.+ | +|+|++|... .....|++.+
T Consensus 147 i~~L~~d~~~~~~~--~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 147 IYRLTDDYLSVTGE--VTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEEeCCCcccccce--EEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 555 3677777432 221 1234578999999998 6 8999988642 2345677665
No 23
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.44 E-value=7.6e-12 Score=129.37 Aligned_cols=178 Identities=18% Similarity=0.224 Sum_probs=119.1
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC--cc----CCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PY----DINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~--~~----d~~Gv~SGsav~~~d 138 (587)
+..-||. +++++|+|+||..... + ...+..++|+||+||+.++.+|.+.. ++ ...++|.+.++. .+
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~----~--~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFE----Y--FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HD 77 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCcc----c--CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-EC
Confidence 4567998 9999999999853211 1 23589999999999999998885432 11 345799999987 59
Q ss_pred CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC---
Q 007857 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--- 215 (587)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--- 215 (587)
|+++|+|++........+.+|.|++.. -.|+. |++.. ...+||.|++. ++|++||+.+....
T Consensus 78 g~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~d-~dG~~Y~~~~~~~~~~~ 142 (288)
T cd09000 78 GTFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFFD-DDGKVYLVGNGWDERRG 142 (288)
T ss_pred CEEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeEc-CCCCEEEEecccCCccc
Confidence 999999998753334456788887763 24652 33321 15689996554 68999999876422
Q ss_pred --CcceEEEEEeCCCCCCEEcccc--CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 216 --NEGMAFVYWSWDFIHWTKLDHP--LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 216 --~~G~~~ly~S~Dl~~W~~~~~~--~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
..+.+.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 143 ~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 143 YNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred cCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234545543 33344444432 2222223578999999987 6 889988864
No 24
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.39 E-value=7.4e-12 Score=130.74 Aligned_cols=159 Identities=23% Similarity=0.364 Sum_probs=111.0
Q ss_pred cceEECCE--EEEEEEECCCCCCCCCCceEEEEEeCCCcccEec-cCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeee
Q 007857 72 GPMYYKGV--YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL-SHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (587)
Q Consensus 72 G~~~~~G~--YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~-~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~ 148 (587)
|++.++|. |||.|...-. ..+ ..+.|+|.|+|.+||++. .+.|.|+..++..||.++.++. .+|+++|+||+.
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~-~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~ 111 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIG-SSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAY 111 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSS-EEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCc-eeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEe
Confidence 46656665 8998865432 222 348999999999999987 4689999999999999999998 589999999998
Q ss_pred cCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEeec-CCCeEEEEEeeeeCCcceEEEEE
Q 007857 149 DASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQA-PDGRWRVLVGGQIDNEGMAFVYW 224 (587)
Q Consensus 149 ~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~V~w~~-~~g~~~m~~g~~~~~~G~~~ly~ 224 (587)
+. ....+++|.|+|. ++|+|.. +++.... ......-+|-. ++.+ .+|+|+|+.+ .+.+.+.+
T Consensus 112 ~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~-lfp~ki~Gky~m~~r-----~~~i~la~ 177 (312)
T PF04041_consen 112 SG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGA-LFPEKINGKYAMLHR-----DPSIWLAY 177 (312)
T ss_dssp ES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCE-EEESEETTEEEEEEE-----SSSBEEEE
T ss_pred cC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceE-EEEEEECCEEEEEEC-----CCCEEEEe
Confidence 74 4567899999997 8999974 2222111 01112235554 3332 4899999998 34678999
Q ss_pred eCCCCCCEEccccCccCCCCCcccc
Q 007857 225 SWDFIHWTKLDHPLYSVQETGMWEC 249 (587)
Q Consensus 225 S~Dl~~W~~~~~~~~~~~~~~~wEC 249 (587)
|+||++|+....++... ..+.||+
T Consensus 178 S~Dl~~W~~~~~~~~~~-~~~~~d~ 201 (312)
T PF04041_consen 178 SPDLIHWGNHREPLLSP-RPGWWDS 201 (312)
T ss_dssp ESSSSSEEEEBETSB---STTSSCS
T ss_pred cCCcccccccccccccC-CCCcChh
Confidence 99999998876544432 3457887
No 25
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.39 E-value=3e-11 Score=124.11 Aligned_cols=183 Identities=20% Similarity=0.246 Sum_probs=128.0
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccC--CCCe-EeeeEEEccCCeE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYD--INSC-WSGSVTILPGDKP 141 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d--~~Gv-~SGsav~~~dg~~ 141 (587)
+..-||. +++++|.|+||+...+.. ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++. .+|++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~------~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~y 79 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG------PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKY 79 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE------SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC------CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeE
Confidence 5668998 999999999999866432 4588999999999999998777664333 2233 9999886 69999
Q ss_pred EEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC--cce
Q 007857 142 FILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN--EGM 219 (587)
Q Consensus 142 ~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~--~G~ 219 (587)
+|+|+.........+.+|+|++.. -.|+... .+.+. .....||.|++. ++|++||+.+..... .+.
T Consensus 80 y~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~d-~dG~~Yl~~~~~~~~~~~~~ 147 (286)
T PF04616_consen 80 YMYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFVD-DDGKYYLYYGSWDNGDPGGG 147 (286)
T ss_dssp EEEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEEE-TTSEEEEEEEESTTTSSEEE
T ss_pred EEEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEEe-cCCCcEEeCcccCCCcccee
Confidence 999994333455678899998763 3787653 22222 246789996555 679999999886432 234
Q ss_pred EEEEE-eCCCCCCEEcc-ccCccC---CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 220 AFVYW-SWDFIHWTKLD-HPLYSV---QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 220 ~~ly~-S~Dl~~W~~~~-~~~~~~---~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
+.+.+ ++|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 148 i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 148 IYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred EEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 55555 46776665543 122222 234688999999997 6 8899998643
No 26
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.39 E-value=5.6e-11 Score=122.29 Aligned_cols=182 Identities=12% Similarity=0.072 Sum_probs=122.8
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEcc-CCeE
Q 007857 65 NWINDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILP-GDKP 141 (587)
Q Consensus 65 gw~nDPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~-dg~~ 141 (587)
+-+.||. +++. +|+||||+.-.-....+.+...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4567998 8887 899999998653222222156799999999999999877642211 23568999998754 6999
Q ss_pred EEEEeeecCC---CceeE--EEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 142 FILYTGIDAS---GQQVQ--NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 142 ~l~YTg~~~~---~~~~q--~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+|+|+..... ....+ ..+.+.|. .+|+. ..|++.+ .....|+.++ + .+|+|||++....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~Df-----~tft~--p~~~~~~-----~~~~ID~~v~-~-~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSDF-----VTFTE--PKVWIDL-----GANVIDTTVV-K-VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCcc-----cccCC--CeEeecC-----CCCeEeeEEE-E-eCCEEEEEEecCCC-
Confidence 9999986532 12223 33333354 68875 3466642 2467899954 4 25999999976432
Q ss_pred cceEEEEEeCCCC-CCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 217 EGMAFVYWSWDFI-HWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 217 ~G~~~ly~S~Dl~-~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
+.+.+.+|++|. .|+...... .......|-|.+|+.+.. .+|+|+++.
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 457788899987 787654321 112346899999999832 288888765
No 27
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.38 E-value=2.6e-11 Score=126.89 Aligned_cols=186 Identities=16% Similarity=0.278 Sum_probs=125.3
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCC---------CCCCCceEEEEEeCCCcccEeccCCCCCC--CccCCCCeEeeeE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGP---------LFGDKMIWAHSVSYDLINWIHLSHALCPS--GPYDINSCWSGSV 133 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~---------~~g~~~~Wgha~S~Dlv~W~~~~~al~P~--~~~d~~Gv~SGsa 133 (587)
.+..||. ++.++|+|+||....-... .+. ...+-..+|+||+||+.++.++.|. ..|. .++|.+.+
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~-~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v 83 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYN-INDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSI 83 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccc-cCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCce
Confidence 3568998 7889999999987643221 122 3468899999999999999988742 3443 47899999
Q ss_pred EEccC----CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCCC-CccCCeEEeecCCCeEE
Q 007857 134 TILPG----DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDD-MFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 134 v~~~d----g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~~~~~~-~fRDP~V~w~~~~g~~~ 207 (587)
+. .+ |++||+|+.. ...+++|+|++.. -.|+...++|++... ++.... .-.||.++++ ++|++|
T Consensus 84 ~~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~D-dDG~~Y 153 (311)
T cd09003 84 AV-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVD-DDGQGY 153 (311)
T ss_pred EE-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEEC-CCCCEE
Confidence 87 46 9999999853 2357899988753 368875457887432 222112 2479996554 789999
Q ss_pred EEEeeeeC-----CcceEEEEE-eCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 208 VLVGGQID-----NEGMAFVYW-SWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 208 m~~g~~~~-----~~G~~~ly~-S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
|+++.... ..+.+.+.+ ++|+..- .+++.. ......+|.|.+|+-+ | +++|.+|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~--~g~~~~-i~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISV--DGSAVT-IDAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceec--cCCceE-ccCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99985321 123355555 3566543 232211 1123578999999987 6 899988864
No 28
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.30 E-value=5.9e-11 Score=120.96 Aligned_cols=137 Identities=23% Similarity=0.317 Sum_probs=99.0
Q ss_pred CCccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC-------CCCccCCCCeEeeeEEEc
Q 007857 65 NWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC-------PSGPYDINSCWSGSVTIL 136 (587)
Q Consensus 65 gw~nDPnG~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~-------P~~~~d~~Gv~SGsav~~ 136 (587)
+.+-||. +++.+ |+|||||+.+... ... ...+++|+|+|+++|+..+..+. +...++...+.++.++.+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~-~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~ 140 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGA-VQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRD 140 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCC-cceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEE
Confidence 3456887 77777 9999999976532 223 67899999999999999876542 223344456889998875
Q ss_pred cC-CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 137 PG-DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 137 ~d-g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
++ |+++|+|++........+.+|.|.|+ ++|++....+.+ ..+.....+++|.++ + .+|+|||++.+.
T Consensus 141 ~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~--~~~~~~~~~e~P~~~-~-~~g~~~l~~~~~ 209 (276)
T cd08979 141 EEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGP--RTGYDDGQLEVPQVV-K-IDGRWYLLYSGR 209 (276)
T ss_pred CCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCC--CCcccCCcCccceEE-E-ECCEEEEEEEec
Confidence 33 89999999876445577889999886 899986433212 222345678999954 4 469999999875
No 29
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=99.28 E-value=3e-11 Score=102.07 Aligned_cols=75 Identities=31% Similarity=0.391 Sum_probs=54.9
Q ss_pred ccEEEEEEEeCCCCceEEEEEEEeeCCCceEEEEeecCCCCCccCCCCcccceeEE-EecC--CCCeEEEEEEEeCceEE
Q 007857 452 GPFGLLILATEDLTEKTAIFFRIFKGQNKYVVLMCSDHSRSSLKEDLDKTTYGAFV-DIDP--HHGKVSLRSLVDHSIVE 528 (587)
Q Consensus 452 ~~~gl~l~~s~d~~e~t~i~~~~~~~~~~~~~~~~~Dr~~s~~~~~~~~~~~~~~~-~~~~--~~~~~~LrifvD~S~vE 528 (587)
.++||.|+++++.+++|.|.||.. .+. +++||++++.. ...+.++... .... .++.++||||||+|+||
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~---~~~---l~vDR~~s~~~--~~~~~~~~~~~~~~~~~~~~~l~L~i~vD~SsvE 80 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPA---NGT---LTVDRTNSGIN--DFSEEFGTFVRSAPLDLGDKILKLRIFVDRSSVE 80 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETT---TTE---EEEEETTSSTT--SCCCEEEEEEEEEETTTTESEEEEEEEEETTEEE
T ss_pred CCeEEEEEECCCccEEEEEEEECC---CCE---EEEeCCCCccc--ccccccCcceEEeeccCCCCcEEEEEEEeCCEEE
Confidence 369999999999999999999953 243 45699999832 2333444322 2222 23668999999999999
Q ss_pred EEcCCC
Q 007857 529 SFAARG 534 (587)
Q Consensus 529 vFvNdG 534 (587)
||+|||
T Consensus 81 iFvNdG 86 (86)
T PF08244_consen 81 IFVNDG 86 (86)
T ss_dssp EEETTT
T ss_pred EEECCC
Confidence 999987
No 30
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.27 E-value=3.6e-10 Score=116.45 Aligned_cols=180 Identities=17% Similarity=0.184 Sum_probs=117.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc-------CCCCeEeeeEEEccCCe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY-------DINSCWSGSVTILPGDK 140 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~-------d~~Gv~SGsav~~~dg~ 140 (587)
.||. ++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|.+.++. .+|+
T Consensus 1 ~DP~-vi~~~~~YY~~~T~~----------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~ 68 (279)
T cd08988 1 HDPV-IIKEGDTWYVFGTGP----------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGK 68 (279)
T ss_pred CCCE-EEEECCEEEEEEecC----------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCE
Confidence 3898 888999999996531 37889999999999999888643322 235799999987 5899
Q ss_pred EEEEEeeecCC-CceeEEEEEecCCCCCcc-ceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLL-KDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l-~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
++|||++.... ....+++|+|++..+|.- ..|++ ..|++..... ......||.++++ ++|++||+.++.. .|
T Consensus 69 yylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~-~~~~~iDp~~f~D-dDG~~Yl~~g~~~--~g 142 (279)
T cd08988 69 FYLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDAS-DNYNAIDPAIIFD-QHGQPWLSFGSFW--GG 142 (279)
T ss_pred EEEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCC-CCCCccCCceEEc-CCCCEEEEecccC--CC
Confidence 99999986432 346778999987644321 12443 2566643211 1234579996655 6899999998632 22
Q ss_pred eEEEEE-eCCCCCCEEcccc--CccC-CCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 219 MAFVYW-SWDFIHWTKLDHP--LYSV-QETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 219 ~~~ly~-S~Dl~~W~~~~~~--~~~~-~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
+.+.+ ++|+..-...+.+ +... ......|-|-+++-+ | +++|++|..
T Consensus 143 -i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 143 -IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred -EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 33333 3454432111111 1111 123467999999987 5 888888863
No 31
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.24 E-value=5.4e-10 Score=115.92 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=93.9
Q ss_pred CCccCCCcceEE--CCEEEEEEEECCCC-CCCCCCceEEEEEeCCCcccEeccCCCCCCC-ccCCCCeEeeeEEEccCCe
Q 007857 65 NWINDPNGPMYY--KGVYHLFYQYNPLG-PLFGDKMIWAHSVSYDLINWIHLSHALCPSG-PYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 65 gw~nDPnG~~~~--~G~YHlfyQ~~P~~-~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~-~~d~~Gv~SGsav~~~dg~ 140 (587)
.++.||. ++++ +|+||||....... ..+ ...+.+.+|+||+||+..+.++.+.. .+...++|.+.++. .+|+
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~--~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~ 79 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGE--GTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGR 79 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccC--CCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCE
Confidence 3568998 8887 99999999765332 111 24689999999999999998886543 34456799999876 6999
Q ss_pred EEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEee
Q 007857 141 PFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (587)
Q Consensus 141 ~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~ 212 (587)
++|+|+..... ....+.+|+|++.. -.|+.....|+... .....||.+ |.+++|++||+++.
T Consensus 80 yyly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~-----~~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 80 YYMFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE-----DWMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC-----CCceEcCce-EEcCCCCEEEEEEe
Confidence 99999876432 22346788887653 25765433344321 124579985 44478999999864
No 32
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.18 E-value=9.1e-10 Score=115.73 Aligned_cols=171 Identities=18% Similarity=0.219 Sum_probs=114.7
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEecc-CCCCCCC------------------ccCCCC
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLS-HALCPSG------------------PYDINS 127 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~-~al~P~~------------------~~d~~G 127 (587)
..|. +++++|+|||||+..-.........+.|+|+|++.. .|+++. +.|.|.. .+|..+
T Consensus 113 waP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~ 191 (349)
T cd08992 113 FTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHK 191 (349)
T ss_pred ECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCc
Confidence 3465 888999999999853211000103578888888876 798763 4566642 367777
Q ss_pred eEeeeEEEccCCeEEEEEeeecC-------CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEee
Q 007857 128 CWSGSVTILPGDKPFILYTGIDA-------SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQ 200 (587)
Q Consensus 128 v~SGsav~~~dg~~~l~YTg~~~-------~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~ 200 (587)
+..++++. .+|+++|||+|+.. ...+.+++|+|++.-+ .|+|.+.|||+... ++ .+ ||+
T Consensus 192 v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~G----Pf~r~~~nPi~~~~------~~--~~-~~~ 257 (349)
T cd08992 192 VHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEG----PYVKSPYNPITNSG------HE--TC-VWQ 257 (349)
T ss_pred eECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCC----CCEeCCCCcccCCC------Cc--eE-EEe
Confidence 88888766 69999999999752 2356789999988753 58898889998421 21 36 698
Q ss_pred cCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 201 APDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 201 ~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
. .+.+..++.....++|. +..|+|.++|+-...+...+...|..+|||-+.-+
T Consensus 258 ~-~~~~~~~~~~d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 258 Y-KGGIAAMLTTDGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred c-CCceEEEEeccCCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 4 55663344333333453 78999999998765433333345677888877765
No 33
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.15 E-value=2.7e-09 Score=109.44 Aligned_cols=174 Identities=18% Similarity=0.193 Sum_probs=113.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCcc------CCCCeEeeeEEEccC
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPY------DINSCWSGSVTILPG 138 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~------d~~Gv~SGsav~~~d 138 (587)
+..-||. +++++|+||||+..... .......+|+||+||+..+.++...... ...++|.+.++. .+
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~------~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~ 77 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW------FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YD 77 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc------CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-EC
Confidence 5567998 99999999999853211 1236788999999999998877542211 235799999877 59
Q ss_pred CeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 139 DKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 139 g~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
|+++|+|+.........+++|++++..+ .|+. |+... ....||.+++. ++|+.||+.+.. +
T Consensus 78 G~yy~yy~~~~~~~~~~i~va~sd~~~G----pw~~----~~~~~------~~~IDp~~f~D-~dG~~Yl~~~~~----~ 138 (269)
T cd08989 78 GKFWLIYTAVKVWKDCHNYLFTAEDITG----PWSR----PIFLN------YGGFDPSLFHD-DDGKKYLINMGW----S 138 (269)
T ss_pred CEEEEEEeccccCCCceEEEEEECCCCC----CCcC----CEECC------CCcccCceEEc-CCCCEEEEecCC----C
Confidence 9999999986433445678998877642 4653 44321 23579996554 789999998752 2
Q ss_pred eEEEEE-eCCCCCCEEcccc----CccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 219 MAFVYW-SWDFIHWTKLDHP----LYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 219 ~~~ly~-S~Dl~~W~~~~~~----~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.+.+.+ +.|... ..+.+ +.........|-|-+|+-+ | +++|++|...
T Consensus 139 ~i~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 139 GIRLQEYSPAEKK--LIGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred cEEEEEEChhhCC--CCCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 234443 222211 01111 1111123468999999987 6 8889888643
No 34
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.11 E-value=2.6e-09 Score=109.53 Aligned_cols=170 Identities=14% Similarity=0.119 Sum_probs=112.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-----------cCCCCeEeeeE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-----------YDINSCWSGSV 133 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-----------~d~~Gv~SGsa 133 (587)
++.-||. +++++|+|+||....- + ...+...+|+||+||+..+.++.+... .-..++|.+.+
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~----~--~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v 81 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMH----Y--SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSL 81 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCcc----c--CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCce
Confidence 4557998 8899999999986421 1 124678899999999999877643211 11347999999
Q ss_pred EEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 134 TILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 134 v~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
+. .+|+++|+|+... ..+.+|+|++.. -.|+.. .++ ....||.+++. ++|+.||+.+..
T Consensus 82 ~~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~D-~dG~~Yl~~~~~ 140 (269)
T cd09001 82 RY-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLFD-DDGTAYLVYGGG 140 (269)
T ss_pred EE-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEEc-CCCCEEEEeCCC
Confidence 87 5999999999852 346788887653 246432 111 14579996554 789999999753
Q ss_pred eCCcceEEEEE-eCCCCCCEEccccCccCC--CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 214 IDNEGMAFVYW-SWDFIHWTKLDHPLYSVQ--ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 214 ~~~~G~~~ly~-S~Dl~~W~~~~~~~~~~~--~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.+.+.+ ++|+....-....+.... .....|-|.+++-+ | +++|++|...
T Consensus 141 -----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~~ 192 (269)
T cd09001 141 -----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAWG 192 (269)
T ss_pred -----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecCC
Confidence 234443 567666521111122211 13578999999976 5 8899998753
No 35
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.10 E-value=3.4e-09 Score=108.67 Aligned_cols=180 Identities=17% Similarity=0.132 Sum_probs=112.7
Q ss_pred CccCCCcceEE-CCEEEEEEEECCCCC----CCCCCceEEEEEeCCCcccEeccCCCCCCCc------------cCCCCe
Q 007857 66 WINDPNGPMYY-KGVYHLFYQYNPLGP----LFGDKMIWAHSVSYDLINWIHLSHALCPSGP------------YDINSC 128 (587)
Q Consensus 66 w~nDPnG~~~~-~G~YHlfyQ~~P~~~----~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~------------~d~~Gv 128 (587)
|+-||. ++.. +|+|||+......+. .|........++|+||+||+..+.++.+... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 679998 7766 679999987543221 1110245779999999999999887754321 234579
Q ss_pred EeeeEEEccCCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEE
Q 007857 129 WSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 129 ~SGsav~~~dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
|.+.+.. .+|+++|+|+..... ....+++|++++.. -.|+....+ .+ ...-.||.+ +.+.+|++|
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~----~~----~~~~iD~~~-f~D~DG~~Y 145 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGN----KP----LFPGIDPSL-FEDDDGKVY 145 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCC----CC----CCCccCCce-EEcCCCCEE
Confidence 9999887 589999999976432 33456778776653 246653221 01 123569995 455789999
Q ss_pred EEEeeeeCCcceEEEEEeCCCCCCEEccccCccCC----CCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 208 VLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQ----ETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 208 m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~----~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
|+.+... + .--++|+....-....+.... .....|-|-+++-+ | +++|++|..
T Consensus 146 l~~~~~~-----i-~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS~~ 202 (269)
T cd08986 146 LVWHNTL-----I-ARLKDDLSGLAGDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGTAW 202 (269)
T ss_pred EEeeCCc-----e-EeccCccccccCCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEeec
Confidence 9987531 1 112455554321111111110 12357999999976 5 899998864
No 36
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.05 E-value=3.4e-09 Score=108.47 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=76.8
Q ss_pred eeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcC--CCCCCCCCccCCeEEeecCCCeEE
Q 007857 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTP--PNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~--p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
.+.++. .+|+++|||++........+++|+|+|+ ++|++.+ +|+|.+ ...++...++||.|+ + .+|+||
T Consensus 2 nP~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~ 72 (268)
T cd08993 2 NPAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYY 72 (268)
T ss_pred cCeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEE
Confidence 456666 5999999999876556778999999996 8999874 566533 233566789999965 4 488999
Q ss_pred EEEeeee--CCcceEEEEEeCCCCCCEEcccc
Q 007857 208 VLVGGQI--DNEGMAFVYWSWDFIHWTKLDHP 237 (587)
Q Consensus 208 m~~g~~~--~~~G~~~ly~S~Dl~~W~~~~~~ 237 (587)
|++++.. ....++.+++|+|+.+|++.+.+
T Consensus 73 m~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 73 ITYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 9998865 34457899999999999998653
No 37
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.03 E-value=1.5e-08 Score=104.84 Aligned_cols=188 Identities=15% Similarity=0.129 Sum_probs=118.9
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCC--CCCC-ccCCCCeEeeeEEEccCCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHAL--CPSG-PYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al--~P~~-~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
||. ++.++++||||+.-.. .....++|+||+||+....++ .+.. .....++|.+.+.. .+|+++|+|
T Consensus 2 DP~-v~~~~d~yY~~~T~~~--------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyy 71 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE--------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYF 71 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC--------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEE
Confidence 898 8899999999986331 247899999999999865332 2222 13345799999987 599999999
Q ss_pred eeecC--CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC---CcceE
Q 007857 146 TGIDA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMA 220 (587)
Q Consensus 146 Tg~~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~---~~G~~ 220 (587)
+.... ...+.+++|.+++..++ +-.|+.. .+++... + ..-.||.++ .+ +|++||+++.... ....+
T Consensus 72 s~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~-~d-dG~~Yl~~~~~~~~~~~~~~i 142 (288)
T cd08980 72 AAGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVF-EH-NGQLYFVWSGWEGRTNGNQNL 142 (288)
T ss_pred EccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEE-EE-CCEEEEEEEccCCCCCCCccE
Confidence 97653 23456678887652112 2478864 3444211 1 234699954 43 5999999875421 12235
Q ss_pred EEEEeCCCCCCEEcccc--CccCCC------CCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEEe
Q 007857 221 FVYWSWDFIHWTKLDHP--LYSVQE------TGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGT 292 (587)
Q Consensus 221 ~ly~S~Dl~~W~~~~~~--~~~~~~------~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~ 292 (587)
.+.+..+...+. +++ +..... ....|-|.+++.+ | +++|++|........|.+|-
T Consensus 143 ~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~~ 205 (288)
T cd08980 143 YIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLGL 205 (288)
T ss_pred EEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEEE
Confidence 555655543443 322 211111 1357999999997 6 88999987544345566664
No 38
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.02 E-value=1.2e-08 Score=105.37 Aligned_cols=120 Identities=18% Similarity=0.262 Sum_probs=85.9
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
.-||. +++.+|+|+|+..-. . + ...+...+|+||+||+.++.++.+. ..++|.+.+.. .+|+++|+|+
T Consensus 15 ~~DP~-i~~~~~~yY~~~t~~--~--~--~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys 82 (280)
T cd09002 15 YPDPS-ILRDGEDYYMTHSSF--K--Y--TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFP 82 (280)
T ss_pred CCCCE-EEEECCEEEEEEcch--h--c--CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEE
Confidence 45997 999999999976521 1 1 2357889999999999988877542 35799999876 6999999999
Q ss_pred eecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEee
Q 007857 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGG 212 (587)
Q Consensus 147 g~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~ 212 (587)
.........+.+|++++..+ .|++ |+... .....||.|+++ ++|++||+.+.
T Consensus 83 ~~~~~~~~~~~va~ad~p~G----pw~~----~~~~~-----~~~~IDp~vf~D-ddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPEG----PWSK----PIDLK-----IGGCIDPGHVVD-EDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCCC----CCcC----CEecC-----CCCccCCceEEc-CCCCEEEEECC
Confidence 87544456678898876532 4653 33211 122469996665 78999999864
No 39
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.87 E-value=1.1e-07 Score=98.82 Aligned_cols=171 Identities=18% Similarity=0.196 Sum_probs=104.3
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEee
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTG 147 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg 147 (587)
.||. +++++|+|+||-... + ++.+|+||+||+..+.++. ..++|.+++.. .+|++|++|+.
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~-----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G-----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C-----CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 6998 888999999986531 1 3678999999999987763 45799999987 58987665553
Q ss_pred ecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcce--------
Q 007857 148 IDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGM-------- 219 (587)
Q Consensus 148 ~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~-------- 219 (587)
. .+.+|+|+|..++ -|+.. +. . ......||.|++. ++|++||+.|.... .+.
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~----~~--~---~~~~~IDp~vf~D-dDGk~Yl~~g~~~~-~~i~~~eL~~d 124 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV----DK--S---FPPGLADPALFID-DDGRLYLYYGCSNN-YPLRGVEVDPD 124 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc----cc--c---cCCCccCCceEEC-CCCCEEEEEecCCC-CCeEEEEECcc
Confidence 2 2357888765221 35431 10 1 1234579996544 68999999875321 110
Q ss_pred --------EEEE-EeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEE
Q 007857 220 --------AFVY-WSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVL 290 (587)
Q Consensus 220 --------~~ly-~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~v 290 (587)
..++ .+..-..|+..+.-.......+..|-|-+++-+ | +++|++|........|.+
T Consensus 125 ~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~Y~v 189 (295)
T cd08982 125 TFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNTYAD 189 (295)
T ss_pred cCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCcEeE
Confidence 1111 122233465443211101123467899999876 5 889998875433344665
Q ss_pred Ee
Q 007857 291 GT 292 (587)
Q Consensus 291 G~ 292 (587)
|-
T Consensus 190 ~~ 191 (295)
T cd08982 190 GV 191 (295)
T ss_pred EE
Confidence 54
No 40
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.84 E-value=7.5e-08 Score=97.49 Aligned_cols=151 Identities=19% Similarity=0.254 Sum_probs=109.9
Q ss_pred cceEECCEEEEEEEECC--CCCCCCCCceEEEEEeCCCcc-cEec-cCCCCC-CCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 72 GPMYYKGVYHLFYQYNP--LGPLFGDKMIWAHSVSYDLIN-WIHL-SHALCP-SGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 72 G~~~~~G~YHlfyQ~~P--~~~~~g~~~~Wgha~S~Dlv~-W~~~-~~al~P-~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
|+++.++++||+|+--- +...-. ..|.+.|.|+|+++ |+.. .+.+.| ..+++.-||.++.++. .+|+++|.||
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~~-~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~-I~~~y~mtYT 112 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHSS-ISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTK-IGGRYYMTYT 112 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCcc-ceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEE-ECCEEEEEEE
Confidence 58889999999998610 001113 67899999999999 9866 467889 6678888999999987 5999999999
Q ss_pred eecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC---CcceEEEE
Q 007857 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID---NEGMAFVY 223 (587)
Q Consensus 147 g~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~---~~G~~~ly 223 (587)
|.+ +..+..++|++.|. .+|+|.+ +++. | +.||-.++=+.-+|+|+|+---... ..+-+++.
T Consensus 113 a~s-~~g~~~~la~t~~f-----~n~~rig--~i~~-p------dn~~~~lfP~~~ngk~~~lhr~~~~~~~~~~niwia 177 (314)
T COG2152 113 AYS-DKGPRLALAVTKDF-----LNWERIG--AIFP-P------DNKDAALFPKKINGKYALLHRPVLGEYGMKGNIWIA 177 (314)
T ss_pred ecC-CCCcccchhhhhhh-----hhhhhcc--cccC-C------CCCCceEeeEEecCcEEEEEeecccccCccCceEEE
Confidence 985 46677899999987 7899863 3432 2 3344432111236899998654332 24669999
Q ss_pred EeCCCCCCEEccccCc
Q 007857 224 WSWDFIHWTKLDHPLY 239 (587)
Q Consensus 224 ~S~Dl~~W~~~~~~~~ 239 (587)
.|+||.+|.....++.
T Consensus 178 ~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 178 FSPDLEHWGIHRKLLG 193 (314)
T ss_pred EcCCccCCCccceeec
Confidence 9999999987654443
No 41
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.82 E-value=1.7e-07 Score=95.22 Aligned_cols=191 Identities=16% Similarity=0.295 Sum_probs=122.9
Q ss_pred ecCCCCC---ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCC----CCCccCCCCeEeee
Q 007857 60 FRPPQNW---INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALC----PSGPYDINSCWSGS 132 (587)
Q Consensus 60 ~~p~~gw---~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~----P~~~~d~~Gv~SGs 132 (587)
+.|..|| +.||- +++++|+||||-..... ..|+-+-+. |+||+..+-|+. +.. ...+.|.+.
T Consensus 14 ~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~~-------~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPq 82 (303)
T cd08987 14 ISPKSDWIVAIKDPT-VVYYNGRYHVYATTADA-------GNYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQ 82 (303)
T ss_pred ccCCCCCeeeecCCe-EEEECCEEEEEEccCCC-------CCceeeeec-ccCHhHhccchhhcccCCC--CCcccccCE
Confidence 4566788 68998 88889999999775431 224333333 999998876652 221 234578888
Q ss_pred EEE-ccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEe
Q 007857 133 VTI-LPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (587)
Q Consensus 133 av~-~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g 211 (587)
+.. .+++++||+|+. . ..++|+|+|..+|. .|.. ..|++............|+.|+ . ++++.||+..
T Consensus 83 Vfyf~pk~kwYL~Yq~-~-----~~~yaTs~dp~~P~--~ws~--~qpl~~~~~~~~~~~~ID~~vI-~-Dd~~~YLff~ 150 (303)
T cd08987 83 VFYFAPQNKWYLIYQW-W-----PAAYSTNSDISNPN--GWSA--PQPLFSGTPNGSPGGWIDFWVI-C-DDTNCYLFFS 150 (303)
T ss_pred EeeeccCCEEEEEEec-C-----ceEEEeCCCCCCCC--ccCC--CcccccCcccCCCCCccceeEE-e-CCCCEEEEEe
Confidence 872 268999999995 2 24688888887774 6775 3688753222233456899974 3 5888888885
Q ss_pred eeeCCcceEEEEEeC-CCCCCEEc-cccC--cc-CCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCee
Q 007857 212 GQIDNEGMAFVYWSW-DFIHWTKL-DHPL--YS-VQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHD 286 (587)
Q Consensus 212 ~~~~~~G~~~ly~S~-Dl~~W~~~-~~~~--~~-~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~ 286 (587)
.. .| .||+|+ .+.+.... +..+ .. .......|-|.+++++ | ..+++|+++..+..+.
T Consensus 151 ~d---nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~~ 212 (303)
T cd08987 151 DD---NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDGG 212 (303)
T ss_pred cC---CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCCC
Confidence 43 34 588873 23222110 1111 11 1224589999999998 5 2389999998765444
Q ss_pred eEEEE
Q 007857 287 YYVLG 291 (587)
Q Consensus 287 ~Y~vG 291 (587)
.|+++
T Consensus 213 rYfrs 217 (303)
T cd08987 213 RYFRS 217 (303)
T ss_pred CeEEE
Confidence 68877
No 42
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.73 E-value=5.3e-07 Score=96.17 Aligned_cols=194 Identities=19% Similarity=0.178 Sum_probs=117.8
Q ss_pred cCCCcceE-ECCEEEEEEEECCCC----CCCCCCceEEEEEeCCCc----ccEeccCCCCCCCcc-CCCCeEeeeEEEcc
Q 007857 68 NDPNGPMY-YKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYDLI----NWIHLSHALCPSGPY-DINSCWSGSVTILP 137 (587)
Q Consensus 68 nDPnG~~~-~~G~YHlfyQ~~P~~----~~~g~~~~Wgha~S~Dlv----~W~~~~~al~P~~~~-d~~Gv~SGsav~~~ 137 (587)
-|+.|-+. ++|.--+|-.--|.. ..|+ ..|+++.-|++.. +|+..+.++...... ....-|||||++..
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~-~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~ 141 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHD-DARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNN 141 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSC-GEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEEST
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccC-CcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcC
Confidence 46777544 789444454544432 3567 8899999999998 999998866544331 22347999999986
Q ss_pred -CCeEEEEEeeecC--C--CceeE-----EEEEecCCCCCccceeeeecCCcEEcCCCCCC-------CCCccCCeEEee
Q 007857 138 -GDKPFILYTGIDA--S--GQQVQ-----NLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-------DDMFRDPTTAWQ 200 (587)
Q Consensus 138 -dg~~~l~YTg~~~--~--~~~~q-----~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~-------~~~fRDP~V~w~ 200 (587)
||++.||||.... . ..|+. +++...+.+ -.+..|++. ..++.+.+.++ ...||||++|-.
T Consensus 142 ~dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~-v~i~g~~~~--~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~D 218 (428)
T PF02435_consen 142 DDGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDG-VWITGFSNH--HELFEGDGKHYQTYEQNPGYAFRDPHVFED 218 (428)
T ss_dssp TTSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTE-EEEEEEEEE--EEEES--SSSB--HHHHHH---EEEEEEEE
T ss_pred CCCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCc-eeEccccce--eEeeccchhhhhChhhcCCccccCCeeEEC
Confidence 7999999999643 1 22332 133333322 222345443 35665432221 267999996544
Q ss_pred cCCCeEEEEEeeee--C-------------------------------CcceEEEEEeC--CCCCCEEccccCccCCCCC
Q 007857 201 APDGRWRVLVGGQI--D-------------------------------NEGMAFVYWSW--DFIHWTKLDHPLYSVQETG 245 (587)
Q Consensus 201 ~~~g~~~m~~g~~~--~-------------------------------~~G~~~ly~S~--Dl~~W~~~~~~~~~~~~~~ 245 (587)
.++|+-||+.-+.. + ..|+|.|.+.+ ++..|+...+++.+..-..
T Consensus 219 P~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~d 298 (428)
T PF02435_consen 219 PEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVND 298 (428)
T ss_dssp TTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS
T ss_pred CCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccc
Confidence 36899999984422 0 14677787764 4568999875555433345
Q ss_pred ccccCeEEEeccCCccceeeccCCCCceeEEEEee
Q 007857 246 MWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSL 280 (587)
Q Consensus 246 ~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~ 280 (587)
..|=|+++.++ | ||+|+.+.
T Consensus 299 e~ERP~iv~~~--g-------------kyYLFt~s 318 (428)
T PF02435_consen 299 ELERPHIVFMN--G-------------KYYLFTIS 318 (428)
T ss_dssp -EEEEEEEEET--T-------------EEEEEEEE
T ss_pred cccCCcEEEEC--C-------------EEEEEEEe
Confidence 89999999999 7 89987653
No 43
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.67 E-value=1.6e-07 Score=97.13 Aligned_cols=108 Identities=21% Similarity=0.263 Sum_probs=81.7
Q ss_pred cCCCcceEECCEEEEEEEECCCC----CCCCCCceEEEEEeCC-CcccEe-ccCCCCCCC-ccCCCCeEeeeEEEccCCe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLG----PLFGDKMIWAHSVSYD-LINWIH-LSHALCPSG-PYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~----~~~g~~~~Wgha~S~D-lv~W~~-~~~al~P~~-~~d~~Gv~SGsav~~~dg~ 140 (587)
-+|. +++++|+|||||...... ...+ ....|+|+|+| +-+|++ ..++|.|.. .||..++..++++...+|+
T Consensus 81 ~~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~-~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~ 158 (291)
T cd08994 81 HNPT-IKRFDGKYYLYYIGNTDPGPRPGHRN-NQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGS 158 (291)
T ss_pred cCCe-EEEECCEEEEEEEcccCCcccccCCC-CceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCC
Confidence 4676 788899999999976431 1123 56899999999 469999 456677754 3677789999998754899
Q ss_pred EEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEE
Q 007857 141 PFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVM 181 (587)
Q Consensus 141 ~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi 181 (587)
++|+|+|.... ..+.|++|+|+|.. .+|+|...+||+
T Consensus 159 ~~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 159 YLLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 99999998642 45788999998863 479997656664
No 44
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.62 E-value=1e-06 Score=90.56 Aligned_cols=131 Identities=20% Similarity=0.221 Sum_probs=87.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc--CCCCCCCccCCCCeEeeeEEEcc-CCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS--HALCPSGPYDINSCWSGSVTILP-GDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~--~al~P~~~~d~~Gv~SGsav~~~-dg~~~l~Y 145 (587)
.|. ++..+|+|||||..+... ... ....++|+|+|+++|++.+ +.+.+...++..++-.+.++.++ +|+++|+|
T Consensus 64 sgs-~~~~~g~~~l~YTg~~~~-~~~-~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~ 140 (280)
T cd08995 64 TGS-VIKGEGTYHAFYTGHNLD-GKP-KQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLL 140 (280)
T ss_pred EeE-EEeeCCEEEEEEEEECCC-CCC-cEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEE
Confidence 454 677899999999865422 112 4678999999999999874 33432333443445577777653 58999999
Q ss_pred eeecC----CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 146 TGIDA----SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 146 Tg~~~----~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
.+... .....+.++.|+|+ ++|+.. .+++.+.. ...+--|.+ ++ .+|+|||+++.+.
T Consensus 141 g~~~~~~~~~~~g~i~~~~S~Dl-----~~W~~~--~~~~~~~~---~~~~E~P~l-~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 141 ATRLLDGPYNRRGCIALFTSKDL-----KNWEYE--EPFYAPGL---YFMPECPDL-FK-MGDWWYLVYSEFS 201 (280)
T ss_pred EeccCCCCCCCCeEEEEEEeCCc-----Ccceec--CceecCCC---cceeecceE-EE-ECCEEEEEEEecc
Confidence 87542 23345667788886 799875 46654321 234667874 44 5799999998764
No 45
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.56 E-value=1.8e-06 Score=88.87 Aligned_cols=157 Identities=11% Similarity=0.093 Sum_probs=98.5
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
+..|. +++++|+|||||..+-.+ .. ....++|+|+|.. .|++.+..+... +.+..+...+++++++||+++|+|
T Consensus 62 ~waP~-v~~~~g~y~~~y~~~~~~--~~-~~~i~~a~s~~p~g~~~~~~~~~~~~-~~~~~~~~Dp~v~~d~dG~~Yl~~ 136 (287)
T cd08999 62 FWAPD-VSYVNGKYVLYYSARDKG--SG-GQCIGVATADSPLGPFTDHGKPPLCC-PEGEGGAIDPSFFTDTDGKRYLVW 136 (287)
T ss_pred ccCce-EEEECCEEEEEEEeecCC--CC-CEEEEEEECCCCCCCCccCCcceEec-CCCCCCccCCCeEECCCCCEEEEE
Confidence 34565 889999999999876543 22 5679999999965 999875332210 112234678888886689999999
Q ss_pred eeecCC--CceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee--CC--cc
Q 007857 146 TGIDAS--GQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI--DN--EG 218 (587)
Q Consensus 146 Tg~~~~--~~~~q~~A-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~--~~--~G 218 (587)
.+.... ..+.+.++ .+.|+ .+|.... ..++.+...+....+--|.+ ++ .+|+|||++.+.. .. .=
T Consensus 137 ~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~~~y 208 (287)
T cd08999 137 KSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRNDEDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGASTY 208 (287)
T ss_pred eccCCCCCCCceEEEEEeCCCC-----ccccCCc-EeeecccccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCCCCE
Confidence 764321 12224444 45554 5665421 23333322233345677885 45 4899999997643 11 12
Q ss_pred eEEEEEeCCCC-CCEEccc
Q 007857 219 MAFVYWSWDFI-HWTKLDH 236 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~~~~ 236 (587)
++.+++|+++. .|+....
T Consensus 209 ~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 209 AVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred EEEEEEeCCCcCCcCCCCC
Confidence 46788999987 8887643
No 46
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.55 E-value=5.4e-06 Score=85.12 Aligned_cols=152 Identities=13% Similarity=0.041 Sum_probs=95.8
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCC-CCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~a-l~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
+-+--|. +++++|+|||||..... .+ ....++|+|+|.. .|++.... +.+ ...+...+.++++++++||+++
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~-~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~y 135 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DG-GFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAY 135 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CC-ceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEE
Confidence 3345677 88999999999987643 23 5679999999976 89987542 322 2223345678888887789999
Q ss_pred EEEeeecCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEeecCCCeEEEEEeeeeCCcc
Q 007857 143 ILYTGIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEG 218 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A-~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G 218 (587)
|+|.+. +...++ .+.|. .+|+.. ..+|..+. .....-+-=|.+ ++ .+|+|||++++.. ..
T Consensus 136 l~~~~~-----~~~~~~~l~~d~-----~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~k-~~G~YYl~yS~~~--~~ 199 (274)
T cd08990 136 LYWGGG-----LGLRVAKLKPDM-----LSLKGE--PVEIVITDGAGDELRRFFEAPWV-HK-RNGTYYLSYSTGD--PE 199 (274)
T ss_pred EEECCc-----CCEEEEEeCccc-----cccCCC--cEEEEeccccCCCCCCcccceeE-EE-ECCEEEEEEECCC--Cc
Confidence 999864 233444 34454 566542 12332111 111122346874 45 5899999998753 34
Q ss_pred eEEEEEeCCCC-CCEEccccC
Q 007857 219 MAFVYWSWDFI-HWTKLDHPL 238 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~~~~~~ 238 (587)
.+.+.+|+++. -|+..+.++
T Consensus 200 ~~~~a~s~~p~GP~~~~g~~~ 220 (274)
T cd08990 200 EIAYATSDSPLGPFTYRGVIL 220 (274)
T ss_pred EEEEEEcCCCCCCcccCcEEe
Confidence 56666888865 577665443
No 47
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.53 E-value=2.6e-06 Score=86.36 Aligned_cols=157 Identities=15% Similarity=0.144 Sum_probs=98.9
Q ss_pred CCCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 64 QNWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 64 ~gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
.+-+-+|. +++++|+|||||+....+ .. ..+.+.|+|+|+.+|....... +... ...++..++++.++||+++|
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~-~~~i~~a~s~d~~g~~~~~~~~-~~~~-~~~~~iDp~vf~d~dg~~yl 129 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YN-GSGIGVATSEDPTGPFEDKVIR-PPTS-NNGNSIDPTVFKDDDGKYYL 129 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CC-cccEEEEECCCCCCCccccccC-cCcc-CCCCccCcceEEcCCCCEEE
Confidence 45567898 899999999999987652 22 5679999999999997653211 1111 23457899999876699999
Q ss_pred EEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC--CcceE
Q 007857 144 LYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID--NEGMA 220 (587)
Q Consensus 144 ~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~--~~G~~ 220 (587)
+|.+.... ....+.++.+++.. .|.. ..+++..........+..|.+ ++ .+|+|||++.+... ..-.+
T Consensus 130 ~~~~~~~~~~~~~i~~~~l~~~~-----~~~~--~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~~ 200 (271)
T cd08978 130 YYGSGDPGAGFGGIYISELTDDL-----TKPT--GPPVLSASSGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYNI 200 (271)
T ss_pred EEecccCCCCCCcEEEEEECccc-----cccc--CCceeeeeeccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCceE
Confidence 99875421 23345666665542 2222 233321111112235678985 55 47999999876532 22356
Q ss_pred EEEEeCCCC-CCEEcc
Q 007857 221 FVYWSWDFI-HWTKLD 235 (587)
Q Consensus 221 ~ly~S~Dl~-~W~~~~ 235 (587)
.+++|+++. -|+..+
T Consensus 201 ~~~~s~~~~Gp~~~~~ 216 (271)
T cd08978 201 GYATSDSIDGPYVKKG 216 (271)
T ss_pred EEEECCCCCCCcCcCC
Confidence 778888864 465543
No 48
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.53 E-value=1.2e-06 Score=90.40 Aligned_cols=89 Identities=22% Similarity=0.331 Sum_probs=64.2
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----CCcceEEEEEeCCCCCCEEccccCccC-CCCCccccC
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-----DNEGMAFVYWSWDFIHWTKLDHPLYSV-QETGMWECP 250 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-----~~~G~~~ly~S~Dl~~W~~~~~~~~~~-~~~~~wECP 250 (587)
++|||.+.. ....+|||+|++..++|+|||+..... .....+.+|+|+||.+|+..+..+... ..+.+| ||
T Consensus 5 ~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-AP 81 (276)
T cd08983 5 GNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-AP 81 (276)
T ss_pred CceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-Cc
Confidence 689997643 357899999876546889999876532 122358899999999999887543222 234477 99
Q ss_pred eEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 251 DIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 251 dlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
++|..+..| +|+|.+|..
T Consensus 82 ev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 82 EAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred cceEcCCCC-------------eEEEEEecc
Confidence 999986434 889888864
No 49
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.48 E-value=1.2e-05 Score=83.14 Aligned_cols=154 Identities=16% Similarity=0.184 Sum_probs=93.3
Q ss_pred CccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
.+-.|. +++.+|+|||||....... . ....++|+|+|.. .|+..+..+.+.. .....++++.++||+++|+
T Consensus 54 ~~waP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~ 125 (294)
T cd08991 54 GFWAPE-VYYYNGKFYMYYSANDRDE--K-TEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLY 125 (294)
T ss_pred cEEccE-EEEECCEEEEEEEeccCCC--C-cceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEE
Confidence 344777 8999999999998764331 2 5788999999977 8887654333322 2356889988777999999
Q ss_pred EeeecCCC--ceeEEEEEecCCCCCccceeeeecC---CcEEcC-------C-C---CCCCCCccCCeEEeecCCCeEEE
Q 007857 145 YTGIDASG--QQVQNLAMPENLSDPLLKDWVKFSG---NPVMTP-------P-N---GVKDDMFRDPTTAWQAPDGRWRV 208 (587)
Q Consensus 145 YTg~~~~~--~~~q~~A~s~D~~d~~l~~w~k~~~---nPvi~~-------p-~---~~~~~~fRDP~V~w~~~~g~~~m 208 (587)
|+...... ......+.+.|. .+|..... .|+..+ + . ..+..-.--|.+ ++ .+|+|||
T Consensus 126 ~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl 198 (294)
T cd08991 126 YSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYL 198 (294)
T ss_pred EEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEE
Confidence 98654321 233445566664 44542111 122111 0 0 011123456774 44 4799999
Q ss_pred EEeeee-CCcc-eEEEEEeCC-CCCCEEc
Q 007857 209 LVGGQI-DNEG-MAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 209 ~~g~~~-~~~G-~~~ly~S~D-l~~W~~~ 234 (587)
++.+.. .... .+.+.+|++ +-.|+..
T Consensus 199 ~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 199 TYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 987543 1111 356678887 4679875
No 50
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.45 E-value=2.6e-06 Score=89.24 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=79.2
Q ss_pred CCCeEeeeEEEccCCe--EEEEEeeecCCCce-eEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeec
Q 007857 125 INSCWSGSVTILPGDK--PFILYTGIDASGQQ-VQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQA 201 (587)
Q Consensus 125 ~~Gv~SGsav~~~dg~--~~l~YTg~~~~~~~-~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~ 201 (587)
...+|-+.|++. +|+ ++|+|.+....... .+++|.|.|+ ++|++. .+||+.+...++....-||-|+..
T Consensus 29 ~~~vfNpgai~~-~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~i- 100 (312)
T PF04041_consen 29 PNAVFNPGAIVF-DGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTKI- 100 (312)
T ss_dssp SSEEEEEEEEEE-TTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEEE-
T ss_pred cceEEcCcEEEE-CCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEEE-
Confidence 456999999874 555 89988877654444 8999999997 899886 579997665666778899998765
Q ss_pred CCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccc
Q 007857 202 PDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDH 236 (587)
Q Consensus 202 ~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~ 236 (587)
+++|||.+.+......++.+.+|+|+.+|+..+.
T Consensus 101 -~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~ 134 (312)
T PF04041_consen 101 -DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGK 134 (312)
T ss_dssp -TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEEC
T ss_pred -CCEEEEEEEEecCCCcccceEEccchHhhEEecc
Confidence 6799999987765555788999999999999874
No 51
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.37 E-value=1e-05 Score=82.43 Aligned_cols=156 Identities=13% Similarity=0.098 Sum_probs=99.5
Q ss_pred CccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcc-cEecc-CCCCCC--CccCCCCeEeeeEEEccCCe
Q 007857 66 WINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLIN-WIHLS-HALCPS--GPYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 66 w~nDPnG~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~-W~~~~-~al~P~--~~~d~~Gv~SGsav~~~dg~ 140 (587)
-+-.|. +++.+ |+|+|||...... .+ ....+.|+|+|+.. |+... ..+.+. ...+...+.+++++.++||+
T Consensus 59 ~~wap~-v~~~~~g~~~l~yt~~~~~--~~-~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 59 GIWAPS-IVYIENGKFYLYYTDVSFT--KN-QQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred cEecce-EEEcCCCCEEEEEEeecCC--CC-ceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 355776 77888 9999999876431 23 57899999999975 55431 112222 12233457899998875699
Q ss_pred EEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC----C
Q 007857 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID----N 216 (587)
Q Consensus 141 ~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~----~ 216 (587)
++|+|.+........+.+|.|+|. .+|++....+++.... ....+.-|.++ + .+|+|||++.+... .
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~-~-~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL-K-KNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE-E-ECCEEEEEEEcCCCcCCCC
Confidence 999998764333456788999886 6887653222232211 23466789854 4 47999999977541 1
Q ss_pred cceEEEEEeCC-CCCCEEc
Q 007857 217 EGMAFVYWSWD-FIHWTKL 234 (587)
Q Consensus 217 ~G~~~ly~S~D-l~~W~~~ 234 (587)
.-.+..++|++ +-.|+..
T Consensus 206 ~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 206 TYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CcceEEEEccCCCCCcccC
Confidence 22455667765 4456544
No 52
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.33 E-value=5.9e-06 Score=84.77 Aligned_cols=121 Identities=15% Similarity=0.088 Sum_probs=71.4
Q ss_pred ccCCeEEeecCCCeEEEEEeeeeC---------CcceEEEEEeCCCCCCEEccccCccCC--------------CCCccc
Q 007857 192 FRDPTTAWQAPDGRWRVLVGGQID---------NEGMAFVYWSWDFIHWTKLDHPLYSVQ--------------ETGMWE 248 (587)
Q Consensus 192 fRDP~V~w~~~~g~~~m~~g~~~~---------~~G~~~ly~S~Dl~~W~~~~~~~~~~~--------------~~~~wE 248 (587)
+|||+|+ ++.+|.|||+..+... ..+.+.+|+|+||.+|+..+..+.... .....+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999965 4457788888765421 124588999999999999875442211 123455
Q ss_pred cCeEEEeccCCccceeeccCCCCceeEEEEeeCCC--CeeeEEEEeecCCCCeeccCCCCCCCCCceecccCCCcccceE
Q 007857 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSD--KHDYYVLGTYDPQMDIFSPDTDFHGNSNDLRYDYGKFYASKTF 326 (587)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~--~~~~Y~vG~~d~~~~~F~~~~~~~~~~~~~~lD~G~fYA~qt~ 326 (587)
||+++.++ | +|+|.+|.... ......+..-+.-.+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999997 6 89998886431 11223333322222345432110 000 012346778
Q ss_pred ecCCCCcEEEE
Q 007857 327 FDSAKNRRVLW 337 (587)
Q Consensus 327 ~d~~~grri~~ 337 (587)
.|. +|+.+|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 874 7888776
No 53
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.25 E-value=1e-05 Score=83.07 Aligned_cols=78 Identities=22% Similarity=0.355 Sum_probs=56.5
Q ss_pred CcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccC---------CCCCccc
Q 007857 178 NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSV---------QETGMWE 248 (587)
Q Consensus 178 nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~---------~~~~~wE 248 (587)
||||. .++.||.|+. .++.|||+.++.....| +.+|+|+||.+|+..+..+... ..+++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67873 3577999654 37899999865432233 6899999999999987644321 123577
Q ss_pred cCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 249 CPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 249 CPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
||+++..+ | ||+|.++..
T Consensus 70 AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred cceEEEEC--C-------------EEEEEEecc
Confidence 99999987 6 888888864
No 54
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.24 E-value=3.4e-05 Score=79.80 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=92.7
Q ss_pred CCccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC--cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEE
Q 007857 65 NWINDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL--INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 65 gw~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl--v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~ 142 (587)
+-+-.|. +++.+|+|||||..+..+. + ....++|+|+|+ -.|+..++.+.+........+..+++++++||+++
T Consensus 56 ~~~wAP~-v~~~~g~yyl~ys~~~~~~--~-~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Y 131 (288)
T cd08998 56 GNLWAPD-VIYLNGKYYLYYSVSTFGS--N-RSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLW 131 (288)
T ss_pred CCccCCe-EEEECCEEEEEEEEEeCCC--C-ceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEE
Confidence 3455676 8889999999998764332 2 567899999998 79998876665543222335678999887789999
Q ss_pred EEEeeecCCCceeEEEEE-ecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-C---Cc
Q 007857 143 ILYTGIDASGQQVQNLAM-PENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-D---NE 217 (587)
Q Consensus 143 l~YTg~~~~~~~~q~~A~-s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~---~~ 217 (587)
|+|.+.. ..+.++. +.|.+.+ ..+... ...++..+. ...-...|++ ++ .+|+|||++++.. . ..
T Consensus 132 l~~~~~~----~~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~--~~~~~Egp~~-~k-~~g~YYl~~S~~~~~~~~~~ 200 (288)
T cd08998 132 LSFGSFW----GGIFLVELDPKTGKP--LYPGGY-GYNIAGRPR--GHGAIEAPYI-IY-RGGYYYLFVSYGGCCAGEDS 200 (288)
T ss_pred EEeeecc----CCEEEEEeCcccCCc--cCCCCc-ceEEeccCC--CCCceeeeEE-EE-eCCEEEEEEEcchhcCCCCC
Confidence 9997532 1223332 2332211 122110 011222221 1123568985 55 5899999986532 1 12
Q ss_pred c-eEEEEEeCCCC-CCE
Q 007857 218 G-MAFVYWSWDFI-HWT 232 (587)
Q Consensus 218 G-~~~ly~S~Dl~-~W~ 232 (587)
+ ++.+++|+++. -|+
T Consensus 201 ~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 201 TYNIRVGRSKSITGPYV 217 (288)
T ss_pred ceEEEEEEcCCCCCCcC
Confidence 2 46788998864 365
No 55
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.24 E-value=1.8e-05 Score=81.80 Aligned_cols=78 Identities=18% Similarity=0.372 Sum_probs=57.0
Q ss_pred CCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEec
Q 007857 177 GNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVS 256 (587)
Q Consensus 177 ~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~ 256 (587)
.||||. ..+.||.|++. +++|||+..+.. ..+.+.+|+|+||.+|+..+..+. ...+++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~~--~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILRD--GEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEEE--CCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEEEC
Confidence 489984 24679996543 789999765422 223478999999999999875442 2345689 89999987
Q ss_pred cCCccceeeccCCCCceeEEEEeeC
Q 007857 257 INGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 257 ~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
| |++|.++..
T Consensus 75 --g-------------kyy~yys~~ 84 (280)
T cd09002 75 --G-------------RYYIYFPAI 84 (280)
T ss_pred --C-------------EEEEEEEee
Confidence 6 889888864
No 56
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.18 E-value=2.1e-05 Score=81.60 Aligned_cols=130 Identities=18% Similarity=0.165 Sum_probs=87.1
Q ss_pred ceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeC-CCcccEeccCC-CCCCCccCCCCeEeeeEEEccCCeEEEEEeeec
Q 007857 73 PMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSY-DLINWIHLSHA-LCPSGPYDINSCWSGSVTILPGDKPFILYTGID 149 (587)
Q Consensus 73 ~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~-Dlv~W~~~~~a-l~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~ 149 (587)
++..+ |+|+|||..+......+ ...-++|+|+ |+++|++.+.. +.+....+..+.-++.++.+ +|+++|+|++..
T Consensus 68 av~~~~g~~~~~YTg~~~~~~~~-~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g~~~ 145 (298)
T cd08996 68 AVVDDNGKLVLFYTGNVKLDGGR-RQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLGAGT 145 (298)
T ss_pred EEEcCCCcEEEEEeceeCCCCCc-eEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEEEEe
Confidence 44566 99999998654321123 5678999999 89999987432 22112223345678888874 799999999876
Q ss_pred CCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCC--CeEEEEEeeee
Q 007857 150 ASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPD--GRWRVLVGGQI 214 (587)
Q Consensus 150 ~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~--g~~~m~~g~~~ 214 (587)
.+....+.++.|+|+ ++|+.. .++.... ......+--|.+ ++ .+ ++|+|+++.+.
T Consensus 146 ~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~-~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 146 EDGTGRILLYRSDDL-----KNWEYL--GELLTSL-GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred cCCCcEEEEEECCCC-----CCCEEc--ceecccC-CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 444566788999886 899875 3443221 112346778884 44 46 99999998764
No 57
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.15 E-value=2.9e-05 Score=80.60 Aligned_cols=78 Identities=14% Similarity=0.139 Sum_probs=56.1
Q ss_pred CCccCCeEEeecCCCeEEEEEeeeeCC----cceEEEEEeCCCCCCEEccccCccCC---CCCccccCeEEEeccCCccc
Q 007857 190 DMFRDPTTAWQAPDGRWRVLVGGQIDN----EGMAFVYWSWDFIHWTKLDHPLYSVQ---ETGMWECPDIFPVSINGTIG 262 (587)
Q Consensus 190 ~~fRDP~V~w~~~~g~~~m~~g~~~~~----~G~~~ly~S~Dl~~W~~~~~~~~~~~---~~~~wECPdlf~l~~~g~~g 262 (587)
..+|||+|++.+++|.|||+..+.... ...+.+|+|+||.+|+..+..+.... ......+|+++..+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 468999987765689999998664211 12378999999999999876443221 12356789999887 6
Q ss_pred eeeccCCCCceeEEEEeeCC
Q 007857 263 VDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 263 ~~~~~~~~~~k~vl~~s~~~ 282 (587)
+|+|.++...
T Consensus 79 ----------~yyly~s~~~ 88 (291)
T cd08981 79 ----------RYYMFATFHN 88 (291)
T ss_pred ----------EEEEEEEecc
Confidence 8888887643
No 58
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.96 E-value=0.00045 Score=70.89 Aligned_cols=140 Identities=9% Similarity=0.087 Sum_probs=85.2
Q ss_pred CCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEe-cc-CCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 69 DPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIH-LS-HALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 69 DPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~-~~-~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
-|. +++++|+|||||..+ ...++|+|+|.. .|+. .+ +.+.+.. ......+++++.++||+.+|+|
T Consensus 68 AP~-v~~~~g~yy~yys~~---------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~~ 135 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN---------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLYW 135 (275)
T ss_pred CCe-EEEECCEEEEEEEcC---------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEEE
Confidence 465 889999999999854 347899999965 7887 33 3333321 1234668888887789999999
Q ss_pred eeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCcc-eEEEE
Q 007857 146 TGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG-MAFVY 223 (587)
Q Consensus 146 Tg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~G-~~~ly 223 (587)
.+.. .......+.|. .+|+.. ..++.... ..-+.-|.+ ++ .+|+|||++.+.. ...+ ++...
T Consensus 136 ~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~~---~~~~EgP~i-~k-~~G~yyl~ys~~~~~~~~Y~~~ya 199 (275)
T cd09004 136 GGWG----HCNVAKLNEDM-----ISFDGE--RDGSEITP---KNYFEGPFM-FK-RNGIYYLMWSEGGWTDPDYHVAYA 199 (275)
T ss_pred cCcC----CEEEEEECCCc-----ccccCc--ceeeeccC---CCceecceE-EE-ECCEEEEEEECCCCCCCCceEEEE
Confidence 7531 11122344554 456432 11221111 123567884 55 5899999987753 1112 46667
Q ss_pred EeCCCC-CCEEccc
Q 007857 224 WSWDFI-HWTKLDH 236 (587)
Q Consensus 224 ~S~Dl~-~W~~~~~ 236 (587)
+|+++. -|+..+.
T Consensus 200 ~s~~~~GP~~~~~~ 213 (275)
T cd09004 200 MADSPLGPFERPGN 213 (275)
T ss_pred EcCCCCCCcccCCc
Confidence 888765 4876653
No 59
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.93 E-value=0.00085 Score=68.72 Aligned_cols=144 Identities=15% Similarity=0.203 Sum_probs=89.5
Q ss_pred ccCCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 67 INDPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 67 ~nDPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
+-=|. ++|. +|+|||||.....+ .+ ....|+|+|++.. .|+.++..+ |. ..+..++++++++||+.||
T Consensus 65 ~waP~-v~y~~~~g~Y~m~~~~~~~~--~~-~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl 135 (265)
T cd08985 65 IERPK-VIYNAKTGKYVMWMHIDSSD--YS-DARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYL 135 (265)
T ss_pred EECCe-EEEeCCCCEEEEEEEeCCCC--Cc-ceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEE
Confidence 33454 6664 59999999987532 24 6789999998865 688765433 21 1335778899988899999
Q ss_pred EEeeecCCCceeEEEEEec-CCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC-CcceEE
Q 007857 144 LYTGIDASGQQVQNLAMPE-NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEGMAF 221 (587)
Q Consensus 144 ~YTg~~~~~~~~q~~A~s~-D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-~~G~~~ 221 (587)
+|.+.. .....++.-+ |. ..+ .+.+..... ......|. +++ .+|+|||+.+.... ....+.
T Consensus 136 ~~~~~~---~~~i~i~~L~~d~-----~~~---~~~~~~~~~----~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~~~~ 198 (265)
T cd08985 136 LYSDRD---NSDLYIYRLTDDY-----LSV---TGEVTTVFV----GAGREAPA-IFK-RNGKYYLLTSGLTGWNPNDAR 198 (265)
T ss_pred EEecCC---CCceEEEEeCCCc-----ccc---cceEEEccC----CCccccce-EEE-ECCEEEEEEccCCCccCCceE
Confidence 998642 1234444332 32 233 233332111 23566888 566 58999999876431 112356
Q ss_pred EEEeCCCC-CCEEccc
Q 007857 222 VYWSWDFI-HWTKLDH 236 (587)
Q Consensus 222 ly~S~Dl~-~W~~~~~ 236 (587)
.++|+++. .|+..+.
T Consensus 199 y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 199 YATATSILGPWTDLGN 214 (265)
T ss_pred EEEecCCCCCccccCc
Confidence 77888765 5776654
No 60
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.92 E-value=0.00012 Score=80.65 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=82.2
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCC
Q 007857 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS 151 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~ 151 (587)
++..+|++||||..+.....+.....-++|+|+|+.+|++.+ ++|.+.......+.-++.+.. .+|+++|+|.+....
T Consensus 91 av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~~~fRDP~V~~-~~g~~~M~~g~~~~~ 169 (445)
T TIGR01322 91 AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYTAHFRDPKVWK-HNGHWYMVIGAQTET 169 (445)
T ss_pred EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCcCcCCCCcEEe-ECCEEEEEEEEecCC
Confidence 455899999999976432222212334689999999999876 455543221122345677765 589999998875433
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCC---CCCCCCccCCeEEeecCCCeEEEEEeee
Q 007857 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPN---GVKDDMFRDPTTAWQAPDGRWRVLVGGQ 213 (587)
Q Consensus 152 ~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~---~~~~~~fRDP~V~w~~~~g~~~m~~g~~ 213 (587)
......+..|+|+ ++|+.. .++..+.. +.....|--|- +++ -+++|+|+++.+
T Consensus 170 ~~g~i~ly~S~Dl-----~~W~~~--g~~~~~~~~~~~~~g~~~ECPd-lf~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 170 EKGSILLYRSKDL-----KNWTFV--GEILGDGQNGLDDRGYMWECPD-LFS-LDGQDVLLFSPQ 225 (445)
T ss_pred CceEEEEEECCCc-----ccCeEe--cccccccccccCCccceEECCe-EEE-ECCcEEEEEecc
Confidence 3334466777775 899875 35553320 11123466777 444 478999999764
No 61
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.82 E-value=0.00039 Score=73.61 Aligned_cols=149 Identities=15% Similarity=0.168 Sum_probs=91.7
Q ss_pred ECCEEEEEEEECCCCCCC--CCCceEEEEEeCCCc----ccEeccCCCCCCCccC--------------CCCeEeeeEEE
Q 007857 76 YKGVYHLFYQYNPLGPLF--GDKMIWAHSVSYDLI----NWIHLSHALCPSGPYD--------------INSCWSGSVTI 135 (587)
Q Consensus 76 ~~G~YHlfyQ~~P~~~~~--g~~~~Wgha~S~Dlv----~W~~~~~al~P~~~~d--------------~~Gv~SGsav~ 135 (587)
.+|+|||||..+-..... ...+..++++++|+. .|+...+.+.+++.+- ....-++.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 459999999987421111 114678999999984 4444444455553221 11234667777
Q ss_pred cc-CCeEEEEEeeecCCC---------------------------ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 007857 136 LP-GDKPFILYTGIDASG---------------------------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (587)
Q Consensus 136 ~~-dg~~~l~YTg~~~~~---------------------------~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~ 187 (587)
++ +|+.||++.++.... .-.+++|++++. .+.+|+-+ .|++.+...
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~~v- 233 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEANGV- 233 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCCCc-
Confidence 54 588999999875421 124567766542 13789865 588865321
Q ss_pred CCCCccCCeEEeecCCCeEEEEEeeeeC-------CcceEEEEEeCCCC-CCEE
Q 007857 188 KDDMFRDPTTAWQAPDGRWRVLVGGQID-------NEGMAFVYWSWDFI-HWTK 233 (587)
Q Consensus 188 ~~~~fRDP~V~w~~~~g~~~m~~g~~~~-------~~G~~~ly~S~Dl~-~W~~ 233 (587)
..++..|.+ ++ .+|+|||+..++.. ....+..|.|++|. .|+.
T Consensus 234 -~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 234 -NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred -CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 346889995 45 58999999875541 11235677888875 4544
No 62
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.73 E-value=0.00097 Score=68.77 Aligned_cols=150 Identities=10% Similarity=0.147 Sum_probs=85.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-c-----cEeccCCCCCCCccCCCCeEeeeEEEccCCe
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-N-----WIHLSHALCPSGPYDINSCWSGSVTILPGDK 140 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~-----W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~ 140 (587)
+.-|. +.+++|+|||||.....+. . ....|.|+|++.. - |+..++.+.+... .......+++++++||+
T Consensus 57 ~WAP~-v~~~~G~yylyys~~~~~~--~-~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~ 131 (279)
T cd08988 57 LWAPD-IYQHNGKFYLYYSVSAFGS--N-TSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQ 131 (279)
T ss_pred Eecce-EEEECCEEEEEEEeccCCC--C-CceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCC
Confidence 44565 8899999999998765432 1 4578999999864 3 5543343333322 12345789999988899
Q ss_pred EEEEEeeecCCCceeEEEEEecCCCCCccceeeee-cCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-----
Q 007857 141 PFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKF-SGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI----- 214 (587)
Q Consensus 141 ~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~-~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~----- 214 (587)
+||+|..... . ....-.+.|.. ..... ....++..+. +.....-|+ +++ .+|+|||+.+...
T Consensus 132 ~Yl~~g~~~~-g--i~~~eL~~d~~-----~~~~~~~~~~i~~~~~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~~~ 199 (279)
T cd08988 132 PWLSFGSFWG-G--IKLFELDKDTM-----KPAEPGELHSIAGRER--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCRGG 199 (279)
T ss_pred EEEEecccCC-C--EEEEEECcccC-----CccCCCcceEEeccCC--CCCceEeeE-EEE-cCCeEEEEEEcCcccCCC
Confidence 9999964321 1 12223344432 11000 0112322211 112345688 456 5899999886532
Q ss_pred CCcceEEEEEeCCCC-CCEE
Q 007857 215 DNEGMAFVYWSWDFI-HWTK 233 (587)
Q Consensus 215 ~~~G~~~ly~S~Dl~-~W~~ 233 (587)
+..-++.+++|+++. -|+.
T Consensus 200 ~~~y~v~~arS~~~~GPy~~ 219 (279)
T cd08988 200 DSTYKIAVGRSKNITGPYLD 219 (279)
T ss_pred CCCeEEEEEEeCCCCCCCCC
Confidence 112247788998874 3443
No 63
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.66 E-value=0.0027 Score=66.57 Aligned_cols=147 Identities=12% Similarity=0.125 Sum_probs=85.4
Q ss_pred CCCcceEEC----CEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEec-cCCC-CCCCc-cC-CCCeEeeeEEEccCC
Q 007857 69 DPNGPMYYK----GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHL-SHAL-CPSGP-YD-INSCWSGSVTILPGD 139 (587)
Q Consensus 69 DPnG~~~~~----G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~-~~al-~P~~~-~d-~~Gv~SGsav~~~dg 139 (587)
-|. +++++ |+|||||... ....+.|+|++.. .|+.+ +..| .+..+ .+ .....++++++++||
T Consensus 80 AP~-v~~~~~~~~gkyylyy~~~--------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG 150 (311)
T cd09003 80 APS-IAVKKINGKGKFYLYFANG--------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDG 150 (311)
T ss_pred CCc-eEEeccCCCCEEEEEEecC--------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCC
Confidence 455 78888 9999999631 3458999999955 89975 3222 22111 11 112568899888899
Q ss_pred eEEEEEeeecC----CCceeEEEEEec-CCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 140 KPFILYTGIDA----SGQQVQNLAMPE-NLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 140 ~~~l~YTg~~~----~~~~~q~~A~s~-D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
+.||+|.+... ...+...+|..+ |. .+. .+.++.-..+ ..+.-|. +++ .+|+|||++++..
T Consensus 151 ~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~~---~g~~~~i~~~----~~~Egp~-~~K-~~G~YYL~ys~~~ 216 (311)
T cd09003 151 QGYLYFGGGVPGGRWANPNTARVIKLGDDM-----ISV---DGSAVTIDAP----YFFEASG-LHK-INGTYYYSYCTNF 216 (311)
T ss_pred CEEEEECCccCCCccccCCCEEEEEeCCCc-----eec---cCCceEccCC----CceEeee-EEE-ECCEEEEEEeCCC
Confidence 99999975321 112334455333 33 222 2233331111 2456788 455 5899999987541
Q ss_pred -------CCcceEEEEEeCCCC-CCEEccccC
Q 007857 215 -------DNEGMAFVYWSWDFI-HWTKLDHPL 238 (587)
Q Consensus 215 -------~~~G~~~ly~S~Dl~-~W~~~~~~~ 238 (587)
....++...+|+++. -|+..+.++
T Consensus 217 ~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 217 GGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred CccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 123345566887754 587755433
No 64
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.63 E-value=0.00055 Score=70.23 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=100.3
Q ss_pred CCcccceeecCCCCCccCCCcceEEC-CEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEecc-CCCCCCCccCCCCeE
Q 007857 52 QPYLTSYHFRPPQNWINDPNGPMYYK-GVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLS-HALCPSGPYDINSCW 129 (587)
Q Consensus 52 ~~~Rp~yH~~p~~gw~nDPnG~~~~~-G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~-~al~P~~~~d~~Gv~ 129 (587)
.+|++.-.+..+.++.-||. ++.++ |+++|+|-..... ... ..-+....+.|..++...+ ..+.+.......++.
T Consensus 104 Gp~~~~~~~~~~~~~~iD~~-vf~d~dG~~Yl~~~~~~~~-~~~-~~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~ 180 (286)
T PF04616_consen 104 GPWTDPGKIPIPGGNSIDPS-VFVDDDGKYYLYYGSWDNG-DPG-GGIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVV 180 (286)
T ss_dssp S-EEEEEEEEEESSSSSSEE-EEEETTSEEEEEEEESTTT-SSE-EEEEEEEEETTTSSEEEEECEEEEEESGSSTTTBE
T ss_pred cccccccceeeccccccCce-EEEecCCCcEEeCcccCCC-ccc-eeEEeecccCccccccCcccccccccccccCCccc
Confidence 67877766655577788998 77776 9999999765443 112 3456677789999988776 344444323345677
Q ss_pred eeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCC-CCCCCCCccCCeEEeecCCCeEEE
Q 007857 130 SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP-NGVKDDMFRDPTTAWQAPDGRWRV 208 (587)
Q Consensus 130 SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p-~~~~~~~fRDP~V~w~~~~g~~~m 208 (587)
-|..++..+|+++|+|.+..........+|.|++.. -.|+....+|++... .......-.-.. ++...+|+|+|
T Consensus 181 Egp~~~k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~----gp~~~~~~~~~~~~~~~~~~~~g~gH~~-~~~~~~g~~~~ 255 (286)
T PF04616_consen 181 EGPFVFKHGGKYYLFYSAGGTGSPYQVGYARSDSPL----GPWEWKKGNPILFSRDGENGVYGPGHGS-VFKDPDGRWYI 255 (286)
T ss_dssp EEEEEEEETTEEEEEEEESGSSTTTEEEEEEESSTT----SGGEETTTCBCEGTTBTTSSCEEEEEEE-EEEETTSEEEE
T ss_pred cceEEEEcCCCEEEEEeccCCCCCceEEEeeccCCC----CceeeccCCeEEEeeccCCccccCccCC-EEECCCCCEEE
Confidence 788888789999999997654333556789998864 356655567877531 111111222234 34556888998
Q ss_pred EEeeee
Q 007857 209 LVGGQI 214 (587)
Q Consensus 209 ~~g~~~ 214 (587)
++-+..
T Consensus 256 ~yh~~~ 261 (286)
T PF04616_consen 256 VYHARN 261 (286)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 886544
No 65
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.59 E-value=0.0005 Score=75.58 Aligned_cols=131 Identities=17% Similarity=0.221 Sum_probs=81.7
Q ss_pred ceEECCEEEEEEEECC-CCC--CCCCCce-EEEEEeCCCcccEec--cCCCCCCCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 73 PMYYKGVYHLFYQYNP-LGP--LFGDKMI-WAHSVSYDLINWIHL--SHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P-~~~--~~g~~~~-Wgha~S~Dlv~W~~~--~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
++..+|+|||||.-+- ..+ ..+ ... -.+|+|+|+++|+.. .++|.+...+.....-++.++..++|+++|++.
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~-~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g 152 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQ-RQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIG 152 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcc-cEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEE
Confidence 4456888999998752 211 122 222 367889999999997 355655432222334567776643468999988
Q ss_pred eecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCC-----eEEEEEeee
Q 007857 147 GIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG-----RWRVLVGGQ 213 (587)
Q Consensus 147 g~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g-----~~~m~~g~~ 213 (587)
+...+..-.+.++.|+|+ ++|+.. .++...+.+.....|--|- ++. -++ +|+|+++.+
T Consensus 153 ~~~~~~~G~i~ly~S~Dl-----~~W~~~--~~~~~~~~~~~g~~wECPd-lf~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 153 ASDEDKTGIALLYRSTDL-----KNWTLL--GELLHSGVGDTGGMWECPD-LFP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EEecCCCeEEEEEECCCc-----ccCeEC--CcccccCCCCccceEECCc-EEE-eCCCCCceeEEEEECcC
Confidence 765444556778888886 899874 3555331111124566776 333 344 999999875
No 66
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.56 E-value=0.0012 Score=72.37 Aligned_cols=173 Identities=20% Similarity=0.301 Sum_probs=97.8
Q ss_pred cCCCcceEECCEEEEEE---EECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCc-------cCCCCeEeeeEEEcc
Q 007857 68 NDPNGPMYYKGVYHLFY---QYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGP-------YDINSCWSGSVTILP 137 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfy---Q~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~-------~d~~Gv~SGsav~~~ 137 (587)
-||. ++..+..|++=- -|.|. -..+.|+||+||+.+.-.|.+... -+..|||.+++. .+
T Consensus 31 PDpS-i~rvg~dyYia~stF~~fpG---------l~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~ 99 (549)
T COG3507 31 PDPS-IVRVGDDYYIATSTFEWFPG---------LAIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YH 99 (549)
T ss_pred CCCc-eEecCCceEEEcceEEEcCc---------eeeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cC
Confidence 5666 666656666532 12232 345779999999998776666532 245689999987 58
Q ss_pred CCeEEEEEeeecCCC---ceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 138 GDKPFILYTGIDASG---QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 138 dg~~~l~YTg~~~~~---~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
||+++|+||...... ....+..++.+..+ -.|+. |+.-+- ..--||.+++ +++|+=||+.+...
T Consensus 100 dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~---G~WsD----pi~l~~-----~~~iDPslf~-D~dGr~wlv~~~w~ 166 (549)
T COG3507 100 DGKFWLYYTDVKRSGGPYKNAGNYLVTAESID---GPWSD----PIKLNG-----SNAIDPSLFF-DKDGRKWLVNGSWD 166 (549)
T ss_pred CCcEEEEEecccccCCcccccccEEEEecCCC---CCccc----ceecCC-----cCccCCceee-cCCCCEEEEecccC
Confidence 999999998764321 11122233322111 24643 444221 1245999655 47899999988764
Q ss_pred CC------cceEEEEEe---CCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeC
Q 007857 215 DN------EGMAFVYWS---WDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLF 281 (587)
Q Consensus 215 ~~------~G~~~ly~S---~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~ 281 (587)
.. .|.++-+.+ ..|..+.+ + .+..+......|-|-+++.+ | .++|..+..
T Consensus 167 ~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~~~G~~~~~~EGPhl~k~~--g-------------YYYL~~a~g 225 (549)
T COG3507 167 GGIFMHSFAGIILQEYDKTTQKLVGQGY-K-IIFDGGNGGLTEGPHLYKKT--G-------------YYYLYVAEG 225 (549)
T ss_pred CCcccccccceeeeeccccccccCCccc-e-eEeccCCCccccCceeeccC--C-------------EEEEEEEcC
Confidence 22 122222222 12333321 1 12223344578999888877 4 667766653
No 67
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.56 E-value=0.00037 Score=71.14 Aligned_cols=113 Identities=18% Similarity=0.255 Sum_probs=83.5
Q ss_pred CCCCC--ccCCC----CeEeeeEEEccCCeEEEEEeee-----cCCCceeEEEEEecCCCCCccce-eeeecCCcEEcC-
Q 007857 117 LCPSG--PYDIN----SCWSGSVTILPGDKPFILYTGI-----DASGQQVQNLAMPENLSDPLLKD-WVKFSGNPVMTP- 183 (587)
Q Consensus 117 l~P~~--~~d~~----Gv~SGsav~~~dg~~~l~YTg~-----~~~~~~~q~~A~s~D~~d~~l~~-w~k~~~nPvi~~- 183 (587)
|.|.. ++++. .+|-++++. .++++.|+|... .........+|.|+|+ .+ |++.+ +|++.|
T Consensus 14 i~~~~~~~~~~~~~~~~vFNpav~~-~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P~ 86 (314)
T COG2152 14 ITRSDYIPPHARFIVVSVFNPAVVL-VGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWPA 86 (314)
T ss_pred eeeccccCCCCceeEEEEecceeEE-ECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEecC
Confidence 55543 34444 689999987 489999998873 2235567789999997 55 98874 799966
Q ss_pred CCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEeCCCCCCEEccccC
Q 007857 184 PNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWDFIHWTKLDHPL 238 (587)
Q Consensus 184 p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~Dl~~W~~~~~~~ 238 (587)
...++....-||-|+. .+++|+|.+.+..+...+..+..++|+.+|++.+.++
T Consensus 87 ~~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 87 NYPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred CCchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 3234567789999654 4799999998875544467788999999999987543
No 68
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.53 E-value=0.0042 Score=64.20 Aligned_cols=125 Identities=14% Similarity=0.182 Sum_probs=71.4
Q ss_pred ceEECCEEEEEEEECCCCCCCCCCceEEEEEeCC----CcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeee
Q 007857 73 PMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD----LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (587)
Q Consensus 73 ~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~D----lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~ 148 (587)
+.+++|+|||||...-.+.. . ....+.++|++ +-.|+..+..+.+.. .....++++.+ +|+++|+|.+.
T Consensus 60 i~~~~g~yylyys~~~~~~~-~-~~~~~v~~a~~~~~~~Gpw~~~~~~~~~~~----~~~iDp~~~~d-dG~~Yl~~~~~ 132 (288)
T cd08980 60 LHYIDGKWYIYFAAGDGGGN-A-NHRMYVLENAGADPPTGPWTFKGRLADPTD----RWAIDGTVFEH-NGQLYFVWSGW 132 (288)
T ss_pred EEEECCEEEEEEEccCCCCC-c-ceeEEEEEeCCCCCCCCCceEeeEeccCCC----CeeeeeEEEEE-CCEEEEEEEcc
Confidence 67899999999985533211 1 34456666664 568998755442211 23578888875 79999999865
Q ss_pred cC--CCceeEEEEEecCCCCCccceeeeecCCcEE-cCC-CCCCC---CCccCCeEEeecCCCeEEEEEeeee
Q 007857 149 DA--SGQQVQNLAMPENLSDPLLKDWVKFSGNPVM-TPP-NGVKD---DMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 149 ~~--~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi-~~p-~~~~~---~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
.. ...+...++...+. .++. +.++. ..| ..++. .-.-=|++ ++ .+|.|||++++..
T Consensus 133 ~~~~~~~~~i~~~~l~~~-----~~~~---g~~~~i~~p~~~we~~~~~~~EgP~~-~k-~~G~yYl~yS~~~ 195 (288)
T cd08980 133 EGRTNGNQNLYIAKMSNP-----WTLT---GPRVLISRPEYDWERQGPGVNEGPAA-LK-RNGKVFLTYSASG 195 (288)
T ss_pred CCCCCCCccEEEEECCCC-----CccC---CcceEecCCCCCceecCceeeECcEE-EE-ECCEEEEEEECCC
Confidence 32 12233444544332 2232 22332 222 22221 12356774 44 4799999998653
No 69
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.51 E-value=0.0026 Score=65.24 Aligned_cols=133 Identities=11% Similarity=0.077 Sum_probs=80.0
Q ss_pred cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCc-ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEe
Q 007857 68 NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI-NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYT 146 (587)
Q Consensus 68 nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv-~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YT 146 (587)
--|. +.|.+|+|||||..+. .+.+.|+|++.. .|+..+... ...++++++++||+.||+|.
T Consensus 77 WAP~-v~~~~gkyy~yys~~~--------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~ 138 (269)
T cd09001 77 WAPS-LRYHNGTFYVFFCTNT--------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYG 138 (269)
T ss_pred ECCc-eEEECCEEEEEEEecC--------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeC
Confidence 3565 8889999999998751 124677777743 787654321 34678888888999999986
Q ss_pred eecCCCceeEEEE-EecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEe
Q 007857 147 GIDASGQQVQNLA-MPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS 225 (587)
Q Consensus 147 g~~~~~~~~q~~A-~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S 225 (587)
+. .+.++ .+.|. ..... ....++..+.. ......-|++ ++ .+|+|||++.+.......+.+++|
T Consensus 139 ~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~~~-~~~~~Egp~i-~k-~~G~YYl~~S~~~~~~~~~~~~~s 203 (269)
T cd09001 139 GG------TIRLVELSPDL-----TGVGG-KDQVIIDAGEE-IGLGAEGSHL-YK-INGYYYIFNIAWGGGGRTQTCLRS 203 (269)
T ss_pred CC------cEEEEEECccc-----CCcCC-CceEEEeCCCc-cccccccCeE-EE-ECCEEEEEEecCCCCCceEEEEEe
Confidence 43 23344 34443 22211 11233433321 1234567884 56 589999998765322234567899
Q ss_pred CCCCC-CEE
Q 007857 226 WDFIH-WTK 233 (587)
Q Consensus 226 ~Dl~~-W~~ 233 (587)
+++.. |+.
T Consensus 204 ~~~~GP~~~ 212 (269)
T cd09001 204 KSLTGPYES 212 (269)
T ss_pred CCCCCCcCC
Confidence 88653 544
No 70
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.28 E-value=0.0086 Score=61.91 Aligned_cols=143 Identities=15% Similarity=0.062 Sum_probs=84.7
Q ss_pred ccCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCC-cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEE
Q 007857 67 INDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILY 145 (587)
Q Consensus 67 ~nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dl-v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~Y 145 (587)
+.-|. +++++|+|||||...... + ....+.++|+|. -.|++. . +.+. .+..++++.++||+.||+|
T Consensus 68 ~WAP~-v~~~~g~yy~yy~~~~~~--~--~~~~~v~~s~~p~gpw~~~-~-~~~~------~~iDp~vf~d~dG~~Y~~~ 134 (288)
T cd09000 68 IWAPT-IRYHDGTFYLITTNVDGM--K--DGGNFIVTADDPAGPWSDP-V-WLDS------GGIDPSLFFDDDGKVYLVG 134 (288)
T ss_pred eEcce-EEEECCEEEEEEEecCCC--C--CCceEEEEeCCCCCCCcCC-E-ecCC------CccCCceeEcCCCCEEEEe
Confidence 44576 889999999999876532 2 345678889887 378742 2 2221 4568888887789999988
Q ss_pred eeecCC----CceeEEEEEecCCCCCccceeeeecCCc--EEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeC-Ccc
Q 007857 146 TGIDAS----GQQVQNLAMPENLSDPLLKDWVKFSGNP--VMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQID-NEG 218 (587)
Q Consensus 146 Tg~~~~----~~~~q~~A~s~D~~d~~l~~w~k~~~nP--vi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~-~~G 218 (587)
...... +...+.++-.+.. .++-. +.| +..... ....--|.| ++ .+|+|||++..... ..-
T Consensus 135 ~~~~~~~~~~~~~~i~~~~l~~~------~~~~~-~~~~~~~~~~~---~~~~Egp~v-~k-~~g~YYl~ys~~~~~~~~ 202 (288)
T cd09000 135 NGWDERRGYNGHGGIWLQEIDLE------TGKLL-GEPKVIWNGTG---GRWPEGPHL-YK-RDGWYYLLIAEGGTGYGH 202 (288)
T ss_pred cccCCccccCCCCcEEEEEEccc------cCCCC-CCcEEEEeCCC---CCCcccCeE-EE-ECCEEEEEEecCCCCCCe
Confidence 654221 1233445533221 12211 222 222111 123456884 56 58999999865421 123
Q ss_pred eEEEEEeCCCC-CCEEc
Q 007857 219 MAFVYWSWDFI-HWTKL 234 (587)
Q Consensus 219 ~~~ly~S~Dl~-~W~~~ 234 (587)
.+.+++|+++. -|+..
T Consensus 203 ~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 203 SVTVARSRSITGPYEPA 219 (288)
T ss_pred EEEEEEeCCCCCCCccC
Confidence 57788999886 67664
No 71
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.25 E-value=0.011 Score=62.62 Aligned_cols=167 Identities=19% Similarity=0.178 Sum_probs=100.0
Q ss_pred CCCcccceeecCCC---CCccCCCcceEEC-CEEEEEEEECCCCC-------CCCCCceEEEEEeCCC-cccEeccCCCC
Q 007857 51 NQPYLTSYHFRPPQ---NWINDPNGPMYYK-GVYHLFYQYNPLGP-------LFGDKMIWAHSVSYDL-INWIHLSHALC 118 (587)
Q Consensus 51 ~~~~Rp~yH~~p~~---gw~nDPnG~~~~~-G~YHlfyQ~~P~~~-------~~g~~~~Wgha~S~Dl-v~W~~~~~al~ 118 (587)
...|.+.--+.... ..+.||. ++... |+-+|||...|... .+. ..+..+..|+|. ..|.. |..|.
T Consensus 57 G~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~D~G~tW~~-p~~l~ 133 (351)
T cd00260 57 GKTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPS-NAYLVLVYSDDDGITWSS-PRDLT 133 (351)
T ss_pred CCcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCC-ceEEEEEEEEcCCceecC-CccCC
Confidence 35676654444432 3567898 77776 99999998877642 123 456678888776 89985 33344
Q ss_pred CCCc-cCCCCeE--eeeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCC
Q 007857 119 PSGP-YDINSCW--SGSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDP 195 (587)
Q Consensus 119 P~~~-~d~~Gv~--SGsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP 195 (587)
+... .+-...+ .|+.++..+|++++.+.+....+.....+.+|+|.| ++|+... +.. + ......|
T Consensus 134 ~~~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~~--~----~~~~~e~ 201 (351)
T cd00260 134 PSVKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GVN--D----AGGCSEC 201 (351)
T ss_pred ccccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CCC--C----CCCCcCC
Confidence 4321 1111222 233455568998775544333344566678899876 8997532 111 1 1233467
Q ss_pred eEEeecCCCeEEEEEeeeeCCcceEEEEEeCC-CCCCEEcc
Q 007857 196 TTAWQAPDGRWRVLVGGQIDNEGMAFVYWSWD-FIHWTKLD 235 (587)
Q Consensus 196 ~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S~D-l~~W~~~~ 235 (587)
.++-. .+|+.+|+..... .+...++.|.| ...|+...
T Consensus 202 ~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~ 239 (351)
T cd00260 202 SVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEAL 239 (351)
T ss_pred EEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCc
Confidence 76533 4788888765542 45667888876 58998653
No 72
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.20 E-value=0.017 Score=58.82 Aligned_cols=148 Identities=20% Similarity=0.218 Sum_probs=88.8
Q ss_pred ccCCCcceE-ECCEEEEEEEECCCCCCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEE
Q 007857 67 INDPNGPMY-YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 67 ~nDPnG~~~-~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
..||. +++ .+|+.||||........|. .....+.+|+| ..+|.... .|.+.......+...+.++...+|++++.
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~-~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~ 124 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWS-GSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAP 124 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCC-TCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCC-ceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEE
Confidence 46787 555 4999999996665554444 44555599998 89999864 23332222223444555455568988774
Q ss_pred -EeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEE
Q 007857 145 -YTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVY 223 (587)
Q Consensus 145 -YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly 223 (587)
|.. ........+.+|+|+| ++|+... ++. + ....--|.++.. .+|+.+|++... . .+.+.++
T Consensus 125 ~~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~--~----~~~~~e~~~~~~-~dG~l~~~~R~~-~-~~~~~~~ 187 (275)
T PF13088_consen 125 YYHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIP--D----GQGECEPSIVEL-PDGRLLAVFRTE-G-NDDIYIS 187 (275)
T ss_dssp EEEE--SSCEEEEEEEEESSTT----SSEEEEE--ECE--C----SEEEEEEEEEEE-TTSEEEEEEEEC-S-STEEEEE
T ss_pred Eeec--cccCcceEEEEeCCCC----ceeeccc--ccc--c----cCCcceeEEEEC-CCCcEEEEEEcc-C-CCcEEEE
Confidence 443 1234566788999987 8998742 221 0 112224453333 678888877553 1 2266777
Q ss_pred EeCC-CCCCEEc
Q 007857 224 WSWD-FIHWTKL 234 (587)
Q Consensus 224 ~S~D-l~~W~~~ 234 (587)
+|.| ..+|+..
T Consensus 188 ~S~D~G~TWs~~ 199 (275)
T PF13088_consen 188 RSTDGGRTWSPP 199 (275)
T ss_dssp EESSTTSS-EEE
T ss_pred EECCCCCcCCCc
Confidence 8876 8999874
No 73
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=96.95 E-value=0.047 Score=54.25 Aligned_cols=185 Identities=15% Similarity=0.244 Sum_probs=99.6
Q ss_pred ecCCCCCc--cCCCcceEECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEE-c
Q 007857 60 FRPPQNWI--NDPNGPMYYKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTI-L 136 (587)
Q Consensus 60 ~~p~~gw~--nDPnG~~~~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~-~ 136 (587)
..|..||. .||- ++++||+||+|....-.+..|| ...=.-+-+|.+..-| +..--+. +...+.+.. .
T Consensus 16 ~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~------sm~f~~Ftdws~~~sA--~q~~m~~-~~vAP~vFYFa 85 (271)
T PF03664_consen 16 AQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYG------SMNFGPFTDWSQMASA--SQNYMDQ-SAVAPQVFYFA 85 (271)
T ss_pred ccCCCCceeccCce-EEeECCEEEEEEEeccCCCccc------eEeeeccCCHHHhhcc--ccccCCc-ccccceEEEec
Confidence 34666885 6998 9999999999998764444444 3333345577765432 2111111 122333322 2
Q ss_pred cCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCC
Q 007857 137 PGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDN 216 (587)
Q Consensus 137 ~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~ 216 (587)
+.+..||.|.-.. ..-....+.|..+| ..|.. ..|++.....-.....-|..||-+ +..-||+.+..
T Consensus 86 Pk~~W~L~yQwg~----~~fsY~Ts~Dptnp--ngWSa--pq~lf~g~i~~~~~g~iD~~vI~D--~~n~yLFfa~D--- 152 (271)
T PF03664_consen 86 PKNIWYLAYQWGP----AAFSYSTSSDPTNP--NGWSA--PQPLFSGSISGSGTGPIDQWVICD--DTNMYLFFAGD--- 152 (271)
T ss_pred CCcEEEEEEecCC----CcceeecCCCCCCC--ccCCC--CcccccccccCCCCCceeeEEEec--CCceEEEEcCC---
Confidence 4677788887321 11123345676666 46876 356653211111245689887754 33445555432
Q ss_pred cceEEEEEeCC-CCCCEE----ccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCC
Q 007857 217 EGMAFVYWSWD-FIHWTK----LDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFS 282 (587)
Q Consensus 217 ~G~~~ly~S~D-l~~W~~----~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~ 282 (587)
.| .||+|.- +-+.-. ....+.+......+|.+++.++. | ..++.|++-..+
T Consensus 153 nG--kiYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G-----------~~~YLmiVEaiG 208 (271)
T PF03664_consen 153 NG--KIYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--G-----------QNQYLMIVEAIG 208 (271)
T ss_pred CC--cEEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--C-----------CceEEEEEEEec
Confidence 25 3898853 222210 00111122234478999999997 5 127777776543
No 74
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.68 E-value=0.043 Score=56.42 Aligned_cols=142 Identities=14% Similarity=0.209 Sum_probs=79.4
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc---ccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEE
Q 007857 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFI 143 (587)
Q Consensus 69 DPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv---~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l 143 (587)
-|. ++|+ +++|+|+||+. +...++|+|.. .|....+...+.......|..+-.+ +.+|+++||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~----------~~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YL 147 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWW----------PAAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYL 147 (303)
T ss_pred cCE-EeeeccCCEEEEEEecC----------ceEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEE
Confidence 565 7765 59999999962 24589998865 5776544333222222234555666 556999999
Q ss_pred EEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCC--eEEEEEeeeeCCcce-E
Q 007857 144 LYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDG--RWRVLVGGQIDNEGM-A 220 (587)
Q Consensus 144 ~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g--~~~m~~g~~~~~~G~-~ 220 (587)
|+.+-+. .+..|-...+ .|-..-..++.....+....-|.-|.| ++ .+| +|+|++-+.....++ .
T Consensus 148 ff~~dnG----~iyra~~~~~------nFp~~~~~~~~~~~~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~rYf 215 (303)
T cd08987 148 FFSDDNG----KLYRSSTTLG------NFPNGGTETVIIMSDSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGGRYF 215 (303)
T ss_pred EEecCCC----eEEEEecchh------hCCCCCCccEEEecCCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCCCeE
Confidence 9987542 3444433221 121111123321110111245677884 55 445 999999775421222 2
Q ss_pred EEEEeCCCC-CCEEc
Q 007857 221 FVYWSWDFI-HWTKL 234 (587)
Q Consensus 221 ~ly~S~Dl~-~W~~~ 234 (587)
.-++|+.|. .|+..
T Consensus 216 rs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 216 RSWTATSLDGPWTPL 230 (303)
T ss_pred EEEEcCCCCCCceec
Confidence 336777765 78876
No 75
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.60 E-value=0.025 Score=58.96 Aligned_cols=79 Identities=13% Similarity=0.138 Sum_probs=47.8
Q ss_pred CeEeeeEEEccCCeEEEEEeeecCC-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCe
Q 007857 127 SCWSGSVTILPGDKPFILYTGIDAS-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGR 205 (587)
Q Consensus 127 Gv~SGsav~~~dg~~~l~YTg~~~~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~ 205 (587)
++.-|..+..++|+++|+|++.... ..-.+.+|+|++.- -.|++...|||+..+.+. ...--...+ ....+|+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~----GP~~~~~~~pil~~~~~~-~~g~GH~s~-v~~~~G~ 232 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPL----GPFTYQPHNPFSYKPGGF-ITGAGHGST-FQDKYGN 232 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCC----CCCCcCCCCccccCCCCe-EecCCcccE-EECCCCC
Confidence 3566777777899999999865322 22356788887653 346665568988544321 001112233 3446788
Q ss_pred EEEEEe
Q 007857 206 WRVLVG 211 (587)
Q Consensus 206 ~~m~~g 211 (587)
||+++=
T Consensus 233 ~~~~yh 238 (295)
T cd08982 233 YWHVGT 238 (295)
T ss_pred EEEEEE
Confidence 888763
No 76
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.58 E-value=0.084 Score=53.67 Aligned_cols=144 Identities=17% Similarity=0.112 Sum_probs=79.6
Q ss_pred CEEEEEEEECCCCCCCCCCceEEEEEe--CCC-cccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCC---
Q 007857 78 GVYHLFYQYNPLGPLFGDKMIWAHSVS--YDL-INWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS--- 151 (587)
Q Consensus 78 G~YHlfyQ~~P~~~~~g~~~~Wgha~S--~Dl-v~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~--- 151 (587)
|+...++.. +...+ ........| +|. .+|.....+..+. .....+..++++.+.+|+++|||+.....
T Consensus 1 G~l~a~~~~---~~~~~-~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~ 74 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEG-AIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGW 74 (275)
T ss_dssp SEEEEEEEE---SSCSC-CEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESC
T ss_pred CeEEEEEEC---CcccC-CCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCC
Confidence 556666655 33334 445555555 887 7899864434333 12245677777777799999999554321
Q ss_pred CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceEEEEEe-CCCCC
Q 007857 152 GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMAFVYWS-WDFIH 230 (587)
Q Consensus 152 ~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~~ly~S-~Dl~~ 230 (587)
........+|+|+| ++|.... .|...+........+.+- +-. .+|++++..-........+.++.| +..+.
T Consensus 75 ~~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~t 146 (275)
T PF13088_consen 75 SGSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGKT 146 (275)
T ss_dssp CTCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTSS
T ss_pred CceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCce
Confidence 12222248899976 8999753 333221111122334432 223 478887763222222344556555 55789
Q ss_pred CEEcc
Q 007857 231 WTKLD 235 (587)
Q Consensus 231 W~~~~ 235 (587)
|+...
T Consensus 147 W~~~~ 151 (275)
T PF13088_consen 147 WSSGS 151 (275)
T ss_dssp EEEEE
T ss_pred eeccc
Confidence 98765
No 77
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=96.23 E-value=0.12 Score=54.00 Aligned_cols=117 Identities=17% Similarity=0.234 Sum_probs=69.0
Q ss_pred eeEEEccCCeEEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEE
Q 007857 131 GSVTILPGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWR 207 (587)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~ 207 (587)
+..++..+|+++|||.-+... +...-++|+|+|+ +||+..+ ++|.+...++....-...++-. +++++
T Consensus 12 PnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~~--~aL~P~~~~d~~g~~SGs~~~~--~~~~~ 82 (308)
T PF00251_consen 12 PNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDL-----VHWEHLP--VALPPDEEYDADGCFSGSAVVD--DDNLV 82 (308)
T ss_dssp EEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSS-----SSEEEEE--EEE-SSSGGGTTEEEEEEEEEE--TTCEE
T ss_pred CccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCC-----CCceeCC--ceEcccccCCcCccCcceEEEE--CCEEE
Confidence 333444699999999876532 3455689999997 8999863 6665543222222223343333 45788
Q ss_pred EEEeeeeCC-cceEEEEEe-CCCCCCEEcc--ccCccC-C--CCCccccCeEEEec
Q 007857 208 VLVGGQIDN-EGMAFVYWS-WDFIHWTKLD--HPLYSV-Q--ETGMWECPDIFPVS 256 (587)
Q Consensus 208 m~~g~~~~~-~G~~~ly~S-~Dl~~W~~~~--~~~~~~-~--~~~~wECPdlf~l~ 256 (587)
|++.+.... .-...+..| +|..+|+... .|+... . ...-|-=|.+|...
T Consensus 83 ~~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 83 LFYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EEEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 888766532 333455666 8899999864 344432 1 22346666665444
No 78
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=94.48 E-value=6.7 Score=41.39 Aligned_cols=146 Identities=14% Similarity=0.141 Sum_probs=83.5
Q ss_pred CceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeeecCC----------CceeEEEEEecCC
Q 007857 96 KMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGIDAS----------GQQVQNLAMPENL 164 (587)
Q Consensus 96 ~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~~~~----------~~~~q~~A~s~D~ 164 (587)
.+......|.| ..+|.... ++..... ....+..++.+.+.+|+++|||...... ....+.+.+|+|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 35577788887 58999853 3444332 2345788888886449999999875431 2345678889887
Q ss_pred CCCccceeeeecCCcEEcCC--CCCCCCCccCC--eEEeecCCCeEEEEEeeeeCC--cceEEEEEeCCCCCCEEccccC
Q 007857 165 SDPLLKDWVKFSGNPVMTPP--NGVKDDMFRDP--TTAWQAPDGRWRVLVGGQIDN--EGMAFVYWSWDFIHWTKLDHPL 238 (587)
Q Consensus 165 ~d~~l~~w~k~~~nPvi~~p--~~~~~~~fRDP--~V~w~~~~g~~~m~~g~~~~~--~G~~~ly~S~Dl~~W~~~~~~~ 238 (587)
| ++|.+. ..+.... ..+ ...++-| -+. . .+|++++.+-..... .-..++|..++.+.|+... ..
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~-l-~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~-~~ 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ-M-KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGE-GV 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE-e-cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECC-CC
Confidence 6 899753 2222111 111 1122333 222 2 378887766443321 2234455556689998643 22
Q ss_pred ccCCCCCccccCeEEEec
Q 007857 239 YSVQETGMWECPDIFPVS 256 (587)
Q Consensus 239 ~~~~~~~~wECPdlf~l~ 256 (587)
.. .....| |.+++++
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 11 133456 7789996
No 79
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=92.36 E-value=0.99 Score=47.39 Aligned_cols=143 Identities=19% Similarity=0.243 Sum_probs=69.9
Q ss_pred CCCcceEECCEEEEEE-EECCCCCCCCCCceEE--EEEeCC-CcccEeccCCCCCCCccCC-CCeE--eeeEEEccCCeE
Q 007857 69 DPNGPMYYKGVYHLFY-QYNPLGPLFGDKMIWA--HSVSYD-LINWIHLSHALCPSGPYDI-NSCW--SGSVTILPGDKP 141 (587)
Q Consensus 69 DPnG~~~~~G~YHlfy-Q~~P~~~~~g~~~~Wg--ha~S~D-lv~W~~~~~al~P~~~~d~-~Gv~--SGsav~~~dg~~ 141 (587)
.|- .+-.++..+|+. .|+... + ...|+ +++|+| .+.|.+... |..... .. .+.+ =||.|+.+||++
T Consensus 62 rPT-tvvkgn~IymLvG~y~~~~---~-~~~~~llLvks~~~g~~W~~~~~-l~~~~~-~~~~~figgGGSGV~m~dGTL 134 (310)
T PF13859_consen 62 RPT-TVVKGNKIYMLVGSYSRSA---G-ADDWGLLLVKSTDGGIKWGDTKS-LPSTSF-QSWKQFIGGGGSGVVMEDGTL 134 (310)
T ss_dssp EEE-EEEETTEEEEEEEEESS-----S-STTEEEEEEEEESSSSEE---EE--GGGS--EEEEEEEE-SEE-EE-TTS-E
T ss_pred eee-eeecceeEEEEEEEEeccc---c-ccccceeeeeccCCcceeeeccc-CCchhc-cccceeecCCCCceEEcCCCE
Confidence 454 334456666665 555322 3 33454 566665 468987422 211110 10 1211 244466679998
Q ss_pred EEEEeeecCCCc-eeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeeeCCcceE
Q 007857 142 FILYTGIDASGQ-QVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQIDNEGMA 220 (587)
Q Consensus 142 ~l~YTg~~~~~~-~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~~~~G~~ 220 (587)
++=-.+...+.. ..-.|.+|+|.+ .+|+-..+ + .....+||.|+.. ++|+-.|+.... .|+-
T Consensus 135 VFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg--~-------s~~gC~~psv~EW-e~gkLlM~~~c~---~g~r 197 (310)
T PF13859_consen 135 VFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG--M-------SPAGCSDPSVVEW-EDGKLLMMTACD---DGRR 197 (310)
T ss_dssp EEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE--TTEEEEEEE-T---TS--
T ss_pred EEEEeeeccCccceEEEEEEECCCc----cceEeccc--c-------CCCCcceEEEEec-cCCeeEEEEecc---cceE
Confidence 876666555445 366788999865 79975321 1 1246789997744 478877775432 2544
Q ss_pred EEEEeCC-CCCCEEcc
Q 007857 221 FVYWSWD-FIHWTKLD 235 (587)
Q Consensus 221 ~ly~S~D-l~~W~~~~ 235 (587)
.+|+|.| ...|+..-
T Consensus 198 rVYeS~DmG~tWtea~ 213 (310)
T PF13859_consen 198 RVYESGDMGTTWTEAL 213 (310)
T ss_dssp -EEEESSTTSS-EE-T
T ss_pred EEEEEcccceehhhcc
Confidence 6999977 47899854
No 80
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=92.22 E-value=2.1 Score=47.72 Aligned_cols=150 Identities=15% Similarity=0.133 Sum_probs=76.5
Q ss_pred CCCCCccCCCcceEECCEEEEEEEECCCC-CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCeEeeeEEEccCC
Q 007857 62 PPQNWINDPNGPMYYKGVYHLFYQYNPLG-PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSCWSGSVTILPGD 139 (587)
Q Consensus 62 p~~gw~nDPnG~~~~~G~YHlfyQ~~P~~-~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg 139 (587)
|-.|=+--|+ ++|+||+|+|+|.--+.. ..|- +++=-..+.++ .=.|.+. +.+ |.. +.+++|...|+||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k-~~~nyl~t~~s~~G~WsDp-i~l-~~~-----~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYK-NAGNYLVTAESIDGPWSDP-IKL-NGS-----NAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCccc-ccccEEEEecCCCCCcccc-eec-CCc-----CccCCceeecCCC
Confidence 3344444576 889999999999543332 1222 33333333332 2256542 212 221 2578889999999
Q ss_pred eEEEEEeeecCC--CceeEEEEEecCCCCCccceeeeecC--CcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-
Q 007857 140 KPFILYTGIDAS--GQQVQNLAMPENLSDPLLKDWVKFSG--NPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI- 214 (587)
Q Consensus 140 ~~~l~YTg~~~~--~~~~q~~A~s~D~~d~~l~~w~k~~~--nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~- 214 (587)
+.+|+|-+.+.. ....-.+-.+... .+=.|..+ -.++-. +.+..--.-|. +.+ .+|.|||+++.+.
T Consensus 157 r~wlv~~~w~~~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~~--G~~~~~~EGPh-l~k-~~gYYYL~~a~gG~ 227 (549)
T COG3507 157 RKWLVNGSWDGGIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIFD--GGNGGLTEGPH-LYK-KTGYYYLYVAEGGL 227 (549)
T ss_pred CEEEEecccCCCcccccccceeeeecc-----ccccccCCccceeEec--cCCCccccCce-eec-cCCEEEEEEEcCCC
Confidence 999999987642 1111111222111 01111111 112211 10111223465 566 6888898886543
Q ss_pred CCcc-eEEEEEeCCCC
Q 007857 215 DNEG-MAFVYWSWDFI 229 (587)
Q Consensus 215 ~~~G-~~~ly~S~Dl~ 229 (587)
...| .+.+.||+.+.
T Consensus 228 t~~gh~~~vaRSKsid 243 (549)
T COG3507 228 TTYGHAIRVARSKSID 243 (549)
T ss_pred CccceeEEEEeccCCC
Confidence 3334 47788998774
No 81
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=89.91 E-value=1.8 Score=42.36 Aligned_cols=102 Identities=23% Similarity=0.378 Sum_probs=64.5
Q ss_pred ceEECCE-EEEEEEECCCCCCCCCCceEEEEEeCCCcccEec--cCCCC-CCCccCCCCeE--eeeEEEccCCeEEEEEe
Q 007857 73 PMYYKGV-YHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHL--SHALC-PSGPYDINSCW--SGSVTILPGDKPFILYT 146 (587)
Q Consensus 73 ~~~~~G~-YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~--~~al~-P~~~~d~~Gv~--SGsav~~~dg~~~l~YT 146 (587)
.++++|+ |+++-|-.|.-. | +.....|.-.+ .|+-. |+.|. |.-+|+..|.| -|.||+.++|++++-|.
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--g-nsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ys 211 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--G-NSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYS 211 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--C-CcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEe
Confidence 5667774 888889888643 4 56666665443 46654 44444 44467777755 68888888999999998
Q ss_pred eecCCCceeEEEEEe---cCCCCCccceeeeecCCcEEc
Q 007857 147 GIDASGQQVQNLAMP---ENLSDPLLKDWVKFSGNPVMT 182 (587)
Q Consensus 147 g~~~~~~~~q~~A~s---~D~~d~~l~~w~k~~~nPvi~ 182 (587)
+...+..--.++-+. .|.-|+ .+|+|.+ .||+.
T Consensus 212 asatd~nycmgllwanen~dlldp--aswtksp-tpvf~ 247 (324)
T COG3940 212 ASATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFK 247 (324)
T ss_pred ccccccceeeeeeeecccCCcCCc--hhcccCC-Cccee
Confidence 764322222233332 333344 5899974 78884
No 82
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=87.24 E-value=18 Score=39.44 Aligned_cols=129 Identities=12% Similarity=0.185 Sum_probs=81.5
Q ss_pred CCEEEEEEEECCCC-CCCCC----CceEEEEEeCC----CcccEeccCCCCCCCccCC-------CCeEeeeEEEc-cCC
Q 007857 77 KGVYHLFYQYNPLG-PLFGD----KMIWAHSVSYD----LINWIHLSHALCPSGPYDI-------NSCWSGSVTIL-PGD 139 (587)
Q Consensus 77 ~G~YHlfyQ~~P~~-~~~g~----~~~Wgha~S~D----lv~W~~~~~al~P~~~~d~-------~Gv~SGsav~~-~dg 139 (587)
+|+..|||.....+ ..-.. ...-|++.+.| +-.|+.+-+.+.||+.+-+ ...-.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999873221 11010 23457777777 5678877777888865332 23458888886 589
Q ss_pred eEEEEEeeecCC--------------------------------CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCC
Q 007857 140 KPFILYTGIDAS--------------------------------GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGV 187 (587)
Q Consensus 140 ~~~l~YTg~~~~--------------------------------~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~ 187 (587)
+.||++.|+... ....++||...+.. ...|+-++ |+|....
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~~--PL~~a~~-- 295 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELLP--PLLSANG-- 295 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEEE--EEEEETT--
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEeC--cceeccc--
Confidence 999999987531 01246788877642 25688764 9996532
Q ss_pred CCCCccCCeEEeecCCCeEEEEEeeee
Q 007857 188 KDDMFRDPTTAWQAPDGRWRVLVGGQI 214 (587)
Q Consensus 188 ~~~~fRDP~V~w~~~~g~~~m~~g~~~ 214 (587)
-.....=|.||.+ +|+||++..++.
T Consensus 296 v~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 296 VNDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TBS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred ccccccCCcEEEE--CCEEEEEEEecc
Confidence 1345556887766 899999998765
No 83
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=85.06 E-value=25 Score=37.13 Aligned_cols=156 Identities=15% Similarity=0.162 Sum_probs=88.2
Q ss_pred CccCCCcceEECCEEEEEEEECCC-C---CCCCCCceEEEEEeCC-CcccEeccCCCCCCCccCCCCe------EeeeEE
Q 007857 66 WINDPNGPMYYKGVYHLFYQYNPL-G---PLFGDKMIWAHSVSYD-LINWIHLSHALCPSGPYDINSC------WSGSVT 134 (587)
Q Consensus 66 w~nDPnG~~~~~G~YHlfyQ~~P~-~---~~~g~~~~Wgha~S~D-lv~W~~~~~al~P~~~~d~~Gv------~SGsav 134 (587)
+.==|.+.|-.+|+-+|.|+..-. + ..|. ...=+.+.|+| ..+|+..+.++.+..+.- .|+ |.=++.
T Consensus 93 ~t~iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~-tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~ 170 (316)
T PF13810_consen 93 TTVIPTDGISVGGRQYLHYMSVRNWGNVPGSWT-TNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAF 170 (316)
T ss_pred eEEcccceEEECCcEEEEEEEEccCCCCCCccc-cCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccc
Confidence 444588899999999999986411 1 1233 22347899999 789999986666654211 121 222233
Q ss_pred EccCCeEEEEEeeecCCCceeEEEEEe-c-CCCCCc------cce--eeeec--CCcEEcCCCCCCCCCccCCeEEeecC
Q 007857 135 ILPGDKPFILYTGIDASGQQVQNLAMP-E-NLSDPL------LKD--WVKFS--GNPVMTPPNGVKDDMFRDPTTAWQAP 202 (587)
Q Consensus 135 ~~~dg~~~l~YTg~~~~~~~~q~~A~s-~-D~~d~~------l~~--w~k~~--~nPvi~~p~~~~~~~fRDP~V~w~~~ 202 (587)
...||-.|+|=|...+ .....||.. . +..|+. ... |.+.. ..||+..+.+ -..|.|.+.
T Consensus 171 ~~~dgyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~vg-------ElSv~~~~~ 241 (316)
T PF13810_consen 171 VKDDGYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPVG-------ELSVRYNEY 241 (316)
T ss_pred cCCCCEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCcc-------ceEEEEeCC
Confidence 3346655666564432 223334432 1 111100 012 65422 1466644321 235677777
Q ss_pred CCeEEEEEeeeeCCcceEEEEEeCCCC-CCEEc
Q 007857 203 DGRWRVLVGGQIDNEGMAFVYWSWDFI-HWTKL 234 (587)
Q Consensus 203 ~g~~~m~~g~~~~~~G~~~ly~S~Dl~-~W~~~ 234 (587)
.|+|+|+.... ..+.|.+.++++.. .|...
T Consensus 242 ~gk~Vl~~~~~--~~~~I~~RtA~~P~GpWs~~ 272 (316)
T PF13810_consen 242 LGKWVLSYFDA--GTGGIVLRTAPSPTGPWSEP 272 (316)
T ss_pred CCEEEEEEecc--cCCcEEEEecCCCCCCCCCC
Confidence 89999998653 33568888898887 58644
No 84
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=80.74 E-value=44 Score=33.81 Aligned_cols=70 Identities=20% Similarity=0.363 Sum_probs=41.4
Q ss_pred CCCcceEE--CCEEEEEEEECCCCCCCCCCceEEEEEeCCCc---ccEeccCCCCCCCcc-CCCCeEeeeEEEccCCeEE
Q 007857 69 DPNGPMYY--KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLI---NWIHLSHALCPSGPY-DINSCWSGSVTILPGDKPF 142 (587)
Q Consensus 69 DPnG~~~~--~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv---~W~~~~~al~P~~~~-d~~Gv~SGsav~~~dg~~~ 142 (587)
-|. |+|+ +..|+|.|||.| ......+|+|.- -|....+ |..+..- ...|..+--+|- ++-..|
T Consensus 78 AP~-vFYFaPk~~W~L~yQwg~--------~~fsY~Ts~DptnpngWSapq~-lf~g~i~~~~~g~iD~~vI~-D~~n~y 146 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQWGP--------AAFSYSTSSDPTNPNGWSAPQP-LFSGSISGSGTGPIDQWVIC-DDTNMY 146 (271)
T ss_pred cce-EEEecCCcEEEEEEecCC--------CcceeecCCCCCCCccCCCCcc-cccccccCCCCCceeeEEEe-cCCceE
Confidence 355 7776 789999999654 335667888865 3765332 4333211 122334444443 366789
Q ss_pred EEEeeec
Q 007857 143 ILYTGID 149 (587)
Q Consensus 143 l~YTg~~ 149 (587)
||+++-+
T Consensus 147 LFfa~Dn 153 (271)
T PF03664_consen 147 LFFAGDN 153 (271)
T ss_pred EEEcCCC
Confidence 9998754
No 85
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=80.24 E-value=28 Score=38.83 Aligned_cols=98 Identities=14% Similarity=0.148 Sum_probs=57.7
Q ss_pred EccCCeEEEEEeeecC---CCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEe
Q 007857 135 ILPGDKPFILYTGIDA---SGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVG 211 (587)
Q Consensus 135 ~~~dg~~~l~YTg~~~---~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g 211 (587)
+..+|++++||.-+.. .+...=+.|+|+|. +||+..+ +++.|...++.....--.+|-+ .++.+.|+-|
T Consensus 48 iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dl-----v~W~~~p--iaL~Pd~~~d~~g~ySGSAV~~-~~~l~lfytg 119 (486)
T COG1621 48 IYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDL-----VHWEHLP--IALAPDDDYDSHGCYSGSAVVD-DGNLSLFYTG 119 (486)
T ss_pred eEECCEEEEEEecCCCCCCCCCceeeeeccCCc-----ccceECC--ceecCCCccccCCceeeeEEEe-CCcEEEEEcc
Confidence 3358999999986542 13334468999886 8998752 3554443333444444443333 4667777766
Q ss_pred eeeC---Ccc-eEEEEEeCCCCCCEE-ccccCcc
Q 007857 212 GQID---NEG-MAFVYWSWDFIHWTK-LDHPLYS 240 (587)
Q Consensus 212 ~~~~---~~G-~~~ly~S~Dl~~W~~-~~~~~~~ 240 (587)
...+ .+. .=.+..|+|..++++ .+.++..
T Consensus 120 ~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~ 153 (486)
T COG1621 120 NVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIID 153 (486)
T ss_pred ceeccCCcceeEEEEEEEcCCCceEeccCCceec
Confidence 5441 122 234667888778777 3555543
No 86
>PTZ00334 trans-sialidase; Provisional
Probab=76.87 E-value=23 Score=41.69 Aligned_cols=88 Identities=19% Similarity=0.201 Sum_probs=55.1
Q ss_pred eeEEEccCCeEEEEEeeecCCCceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEE
Q 007857 131 GSVTILPGDKPFILYTGIDASGQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLV 210 (587)
Q Consensus 131 Gsav~~~dg~~~l~YTg~~~~~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~ 210 (587)
||.|+..||++++=-.+...++...-.|.||+|.+ +|+=.. +....+.+||.|+.. ++|+-.|+.
T Consensus 263 GSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls~---------g~s~~gC~~P~I~EW-e~gkLlM~t 327 (780)
T PTZ00334 263 GSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLSK---------GMSADGCSDPSVVEW-KEGKLMMMT 327 (780)
T ss_pred cCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEcC---------CCCCCCCCCCEEEEE-cCCeEEEEE
Confidence 44456678998765555544455556788998863 484221 112246789997744 367877765
Q ss_pred eeeeCCcceEEEEEeCCC-CCCEEccc
Q 007857 211 GGQIDNEGMAFVYWSWDF-IHWTKLDH 236 (587)
Q Consensus 211 g~~~~~~G~~~ly~S~Dl-~~W~~~~~ 236 (587)
... .|+=.+|+|.|+ ..|+..-.
T Consensus 328 ~C~---dG~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 328 ACD---DGRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred EeC---CCCEEEEEECCCCCChhhCCC
Confidence 442 244469999885 78987543
No 87
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=72.41 E-value=19 Score=37.99 Aligned_cols=92 Identities=13% Similarity=0.252 Sum_probs=53.2
Q ss_pred ccCCeEEEEEeeecCCC-------ceeEEEEEecCCCCCccceeeeecCCcEEcCC---CCCCCCCccCCeE--EeecCC
Q 007857 136 LPGDKPFILYTGIDASG-------QQVQNLAMPENLSDPLLKDWVKFSGNPVMTPP---NGVKDDMFRDPTT--AWQAPD 203 (587)
Q Consensus 136 ~~dg~~~l~YTg~~~~~-------~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p---~~~~~~~fRDP~V--~w~~~~ 203 (587)
..+|+.||.|..+..-. .....||+|+|.| .+|++.+ ..+-.+. ++... .-.++. -+. .+
T Consensus 102 ~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~~g~~~--~~~~fq~~a~~-~~ 173 (316)
T PF13810_consen 102 SVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFHPGFNQ--GNWNFQMAAFV-KD 173 (316)
T ss_pred EECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-CcccccccccCCccc--ccccccccccc-CC
Confidence 35899999999875311 2256799999986 8999864 2222221 11100 011221 122 24
Q ss_pred CeEEEEEeeeeCCcceEEEEEe-----CCCCCCEEcc
Q 007857 204 GRWRVLVGGQIDNEGMAFVYWS-----WDFIHWTKLD 235 (587)
Q Consensus 204 g~~~m~~g~~~~~~G~~~ly~S-----~Dl~~W~~~~ 235 (587)
+.|+-++|......|.+.|+|- .|+..|+|-.
T Consensus 174 dgyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~ 210 (316)
T PF13810_consen 174 DGYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWD 210 (316)
T ss_pred CCEEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccC
Confidence 5577777775555667788875 4555676643
No 88
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=69.52 E-value=26 Score=38.87 Aligned_cols=91 Identities=20% Similarity=0.293 Sum_probs=54.8
Q ss_pred cCCeEEEEEeeecCC---CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCC-CCCccCCeEEeecCCCeEEEEEee
Q 007857 137 PGDKPFILYTGIDAS---GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVK-DDMFRDPTTAWQAPDGRWRVLVGG 212 (587)
Q Consensus 137 ~dg~~~l~YTg~~~~---~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~-~~~fRDP~V~w~~~~g~~~m~~g~ 212 (587)
.+|.++|||.-+... +...=++|+|+|. ++|+.++ |-|.|....+ ..-|----++ . .+|.=.|+..+
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkDL-----inW~~lp--~Ai~Ps~~~ding~wSGSati-~-~~~~~vilytg 138 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKDL-----INWEALP--PAIAPSEWFDINGCWSGSATI-D-PNNSPVILYTG 138 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchhh-----ccccccC--cccCCCCccccCccccceEEE-c-cCCCeEEEecc
Confidence 489999999976542 3344579999997 8999864 5554432111 1223222222 2 46777777766
Q ss_pred eeCCcceEEEEEe------CCCCCCEEccc
Q 007857 213 QIDNEGMAFVYWS------WDFIHWTKLDH 236 (587)
Q Consensus 213 ~~~~~G~~~ly~S------~Dl~~W~~~~~ 236 (587)
......++..|.- +=|+.|...+.
T Consensus 139 ~d~~~rqVqn~a~p~d~sdp~l~~w~k~~g 168 (571)
T KOG0228|consen 139 IDPNNRQVQNYAYPKDVSDPQLIAWSKDGG 168 (571)
T ss_pred cCcCceEEEEEeccCCCCchhhheeecCCC
Confidence 5544567777753 22567876543
No 89
>PF06905 FAIM1: Fas apoptotic inhibitory molecule (FAIM1); InterPro: IPR010695 This family consists of several fas apoptotic inhibitory molecule (FAIM) proteins. FAIM expression is upregulated in B cells by anti-Ig treatment that induces Fas-resistance, and overexpression of FAIM diminishes sensitivity to Fas-mediated apoptosis of B and non-B cell lines. FAIM is highly evolutionarily conserved and is widely expressed in murine tissues, suggesting that FAIM plays an important role in cellular physiology [].; GO: 0043066 negative regulation of apoptosis; PDB: 3MX7_A 2KW1_A 2KD2_A.
Probab=45.70 E-value=69 Score=30.86 Aligned_cols=31 Identities=13% Similarity=0.239 Sum_probs=26.4
Q ss_pred EEEEEEEeCceEEEEcCCCceEEEEEeecCCc
Q 007857 516 VSLRSLVDHSIVESFAARGKTCITTRVYPKVA 547 (587)
Q Consensus 516 ~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~ 547 (587)
.+.||++|...++||+| |+..=|.+-|....
T Consensus 108 ~~~RIvLdk~t~~vwvn-G~~iet~~eFvd~G 138 (177)
T PF06905_consen 108 QEYRIVLDKDTMDVWVN-GEKIETEGEFVDDG 138 (177)
T ss_dssp EEEEEEEETTTTEEEET-TCEE--EEEEETTC
T ss_pred CEEEEEEEcceEEEEEC-CEEccccceecCCC
Confidence 58999999999999998 78899999999876
No 90
>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain. EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s
Probab=45.43 E-value=3.2e+02 Score=27.11 Aligned_cols=57 Identities=23% Similarity=0.314 Sum_probs=35.7
Q ss_pred CeEEEEEEEeC--ceEEEEcCCCceEEEEEe--ecCCccCCccEEEEEecCc-eeEEEeEEEeee
Q 007857 514 GKVSLRSLVDH--SIVESFAARGKTCITTRV--YPKVAVENEAHLFAFNNGT-QSVVISSLNAWN 573 (587)
Q Consensus 514 ~~~~LrifvD~--S~vEvFvNdG~~~~T~rv--yp~~~~~~~~~i~~~~~g~-~~~~v~~l~~w~ 573 (587)
...++||--++ ..++|.|+ ++.|+++.- .|... -..++.|...+. ..-.|.++++|+
T Consensus 152 ~p~~iri~Y~~~~~~l~v~vd-~~~Cf~~~~v~lP~~~--y~fGiSAaTg~~~d~hdIl~~~~~~ 213 (215)
T cd06903 152 VPSTIRLSYDALNSLFKVQVD-NRLCFQTDKVQLPQGG--YRFGITAANADNPESFEILKLKVWN 213 (215)
T ss_pred CCEEEEEEEECCCCEEEEEEC-CCEEEecCCeecCCCC--CEEEEEEcCCCCCCcEEEEEEEEec
Confidence 45677777777 99999996 688887643 34222 136777744331 234566666664
No 91
>PF02012 BNR: BNR/Asp-box repeat; InterPro: IPR002860 Members of this entry contain multiple BNR (bacterial neuraminidase repeat) repeats or Asp-boxes. The repeats are short, however the repeats are never found closer than 40 residues together suggesting that the repeat is structurally longer. These repeats are found in a variety of non-homologous proteins, including bacterial ribonucleases, sulphite oxidases, reelin, netrins, sialidases, neuraminidases, some lipoprotein receptors, and a variety of glycosyl hydrolases [].; PDB: 2JKB_A 2VW0_A 2VW2_A 2VW1_A 2CN2_D 2CN3_B 2VK7_B 2VK5_A 2VK6_A 2BF6_A ....
Probab=32.57 E-value=35 Score=18.12 Aligned_cols=11 Identities=27% Similarity=0.522 Sum_probs=7.2
Q ss_pred EecCCCCCccceeee
Q 007857 160 MPENLSDPLLKDWVK 174 (587)
Q Consensus 160 ~s~D~~d~~l~~w~k 174 (587)
+|+|+| ++|++
T Consensus 2 ~S~D~G----~TW~~ 12 (12)
T PF02012_consen 2 YSTDGG----KTWKK 12 (12)
T ss_dssp EESSTT----SS-EE
T ss_pred EeCCCc----ccCcC
Confidence 577876 88974
No 92
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements. Members of the galectins family are found in mammals, birds, amphibians, fish, nematodes, sponges, and some fungi. Galectins are known to carry out intra- and extracellular functions through glycoconjugate-mediated recogntion. From the cytosol they may be secreted by non-classical pathways, but they may also be targeted to the nucleus or specific sub-cytosolic sites. Within the same peptide chain some galectins have a CRD with only a few additional amino acids, whereas others have two CRDs joined by a link peptide, and one (galectin-3) has one CRD joined to a different type of domain [, ]. The galectin carbohydrate recognition domain (CRD) is a beta-sandwich of about 135 amino acid. The two sheets are slightly bent with 6 strands forming the concave side and 5 strands forming the convex side. The concave side forms a groove in which carbohydrate is bound, and which is long enough to hold about a linear tetrasaccharide [, ].; GO: 0005529 sugar binding; PDB: 2WSU_B 2WT0_A 2WT1_A 2WT2_B 2WSV_A 1HLC_A 2ZGQ_A 3M3Q_B 1WW5_C 3M3E_A ....
Probab=31.73 E-value=3.7e+02 Score=23.86 Aligned_cols=24 Identities=17% Similarity=0.230 Sum_probs=20.7
Q ss_pred CCeEEEEEEEeCceEEEEcCCCceE
Q 007857 513 HGKVSLRSLVDHSIVESFAARGKTC 537 (587)
Q Consensus 513 ~~~~~LrifvD~S~vEvFvNdG~~~ 537 (587)
++..+|+|.+..+..+|++| |+..
T Consensus 82 g~~F~i~I~~~~~~f~I~vn-g~~~ 105 (133)
T PF00337_consen 82 GQPFEIRIRVEEDGFKIYVN-GKHF 105 (133)
T ss_dssp TSEEEEEEEEESSEEEEEET-TEEE
T ss_pred CceEEEEEEEecCeeEEEEC-CeEE
Confidence 56799999999999999998 5544
No 93
>PTZ00449 104 kDa microneme/rhoptry antigen; Provisional
Probab=29.89 E-value=1.6e+02 Score=33.12 Aligned_cols=54 Identities=20% Similarity=0.357 Sum_probs=38.0
Q ss_pred ECCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCCccCCCCeEeeeEEEccCCeEEEEEeee
Q 007857 76 YKGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSGPYDINSCWSGSVTILPGDKPFILYTGI 148 (587)
Q Consensus 76 ~~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~Gv~SGsav~~~dg~~~l~YTg~ 148 (587)
..|.=+|-.|+.|.-.. ...+--|.|-|+..... .|++.+|. .++.+||.|--.
T Consensus 56 magvkylq~q~~~~v~i-------hk~veg~iviwen~~~p-----------lyt~aivt-~n~~pymayve~ 109 (943)
T PTZ00449 56 MAGVKYLQLQHGPGVNI-------HKLVEGDIVIWENAEMP-----------LYTCAIVT-NNDGPYMAYVEL 109 (943)
T ss_pred hccceeEEeecCCCcce-------eEeeeccEEEEecCCCc-----------ceeEEEEe-cCCCCeeeeeee
Confidence 46878888898885544 34788899999975432 47777665 577778887654
No 94
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=29.01 E-value=1.3e+02 Score=28.11 Aligned_cols=55 Identities=13% Similarity=0.098 Sum_probs=35.3
Q ss_pred CCeEEEEEEEeCceEEEEcCCCceEEEEEeecCCc---cCCccEEEEEecCceeEEEeEEEe
Q 007857 513 HGKVSLRSLVDHSIVESFAARGKTCITTRVYPKVA---VENEAHLFAFNNGTQSVVISSLNA 571 (587)
Q Consensus 513 ~~~~~LrifvD~S~vEvFvNdG~~~~T~rvyp~~~---~~~~~~i~~~~~g~~~~~v~~l~~ 571 (587)
++=.+++|.+..+.|.+||| |+.+++..--.... ....++|.+ .+ ..+.+.++++
T Consensus 127 ~~W~~~~I~~~g~~i~v~vn-G~~v~~~~d~~~~~~~~~~G~Igl~~--~~-~~~~frNi~I 184 (185)
T PF06439_consen 127 GEWNTVRIVVKGNRITVWVN-GKPVADFTDPSFPYSNPTKGPIGLQT--HG-SEVQFRNIKI 184 (185)
T ss_dssp TSEEEEEEEEETTEEEEEET-TEEEEEEETTSHHHHHHSSBEEEEEC--SS-STEEEEEEEE
T ss_pred CceEEEEEEEECCEEEEEEC-CEEEEEEEcCCCCCCCCCceEEEEEe--CC-CeEEEEEEEE
Confidence 56689999999999999997 77776665421100 112455543 33 3567777664
No 95
>cd00070 GLECT Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.
Probab=27.33 E-value=4.4e+02 Score=23.33 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=20.6
Q ss_pred CCeEEEEEEEeCceEEEEcCCCceE
Q 007857 513 HGKVSLRSLVDHSIVESFAARGKTC 537 (587)
Q Consensus 513 ~~~~~LrifvD~S~vEvFvNdG~~~ 537 (587)
+...+|+|.++....+|||| |+..
T Consensus 77 g~~F~l~i~~~~~~f~i~vn-g~~~ 100 (127)
T cd00070 77 GQPFELTILVEEDKFQIFVN-GQHF 100 (127)
T ss_pred CCeEEEEEEEcCCEEEEEEC-CEeE
Confidence 57889999999999999998 5544
No 96
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=22.15 E-value=8e+02 Score=24.51 Aligned_cols=202 Identities=15% Similarity=0.213 Sum_probs=99.3
Q ss_pred cCCCcceEE-CCEEEEEEEECCCCCCCCCCceEEEEEeCCCcccEeccCCCCCCC--ccCCCCeEeeeEEEccCCeEEEE
Q 007857 68 NDPNGPMYY-KGVYHLFYQYNPLGPLFGDKMIWAHSVSYDLINWIHLSHALCPSG--PYDINSCWSGSVTILPGDKPFIL 144 (587)
Q Consensus 68 nDPnG~~~~-~G~YHlfyQ~~P~~~~~g~~~~Wgha~S~Dlv~W~~~~~al~P~~--~~d~~Gv~SGsav~~~dg~~~l~ 144 (587)
.||. +..+ || |+.|--.-|. .. ......|.|-+.+.=.+ |++++... .--+.-+|.+..-. .+|+.|++
T Consensus 14 adp~-iykh~dg-~yyftasvpe---yd-rie~rraktleglr~ae-pvvvwrk~esgpms~liwapeih~-ingkwyiy 85 (324)
T COG3940 14 ADPM-IYKHNDG-YYYFTASVPE---YD-RIEVRRAKTLEGLRNAE-PVVVWRKHESGPMSNLIWAPEIHF-INGKWYIY 85 (324)
T ss_pred cCce-EEEccCc-cEEEEeccCc---cc-eeeeeeccchhhhhccC-ceeEEeccCCCchhhcccccceeE-EcceEEEE
Confidence 4775 4444 56 5555444443 33 56677787766543211 22222211 01123467777655 49999999
Q ss_pred EeeecC----C-CceeEEEEEecCCCCCccceeeeecCCcEEcCCCCCCCCCccCCeEEeecCCCeEEEEEeeee-CCcc
Q 007857 145 YTGIDA----S-GQQVQNLAMPENLSDPLLKDWVKFSGNPVMTPPNGVKDDMFRDPTTAWQAPDGRWRVLVGGQI-DNEG 218 (587)
Q Consensus 145 YTg~~~----~-~~~~q~~A~s~D~~d~~l~~w~k~~~nPvi~~p~~~~~~~fRDP~V~w~~~~g~~~m~~g~~~-~~~G 218 (587)
+.+... . --+....+.-....+|+--.|... +-|.++-. ..--|... |. ..|+-|.+.+-.. +-.|
T Consensus 86 faaa~ta~~k~g~f~hrmfvlene~anpltg~w~ek--gqikt~we----sfsldatt-fe-h~gk~yyvwaqkdp~i~g 157 (324)
T COG3940 86 FAAAPTANIKDGTFNHRMFVLENENANPLTGNWVEK--GQIKTAWE----SFSLDATT-FE-HNGKLYYVWAQKDPNIKG 157 (324)
T ss_pred EeecCcccccccccceeEEEEecCCCCCCcccceec--ceeccchh----cceeeeee-ee-eCCEEEEEEeccCCCccC
Confidence 876532 1 112223333333345555567642 23333221 12236664 44 3555444444333 3345
Q ss_pred eEEEEEeCCCCCCEEccccCccCCCCCccccCeEEEeccCCccceeeccCCCCceeEEEEeeCCCCeeeEEEEee
Q 007857 219 MAFVYWSWDFIHWTKLDHPLYSVQETGMWECPDIFPVSINGTIGVDTSVLNPGVKHVLKTSLFSDKHDYYVLGTY 293 (587)
Q Consensus 219 ~~~ly~S~Dl~~W~~~~~~~~~~~~~~~wECPdlf~l~~~g~~g~~~~~~~~~~k~vl~~s~~~~~~~~Y~vG~~ 293 (587)
.--+|-.+----|+-.+++..-...-.-|||--|.--. |+..+- .+.|-.+.+|... ....|++|-+
T Consensus 158 nsniyiaemenpwtikgepvmlskpe~dwe~~gfwvne--gpav~k-----~ngkifi~ysasa-td~nycmgll 224 (324)
T COG3940 158 NSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNE--GPAVLK-----KNGKIFITYSASA-TDVNYCMGLL 224 (324)
T ss_pred CcceEEEeccCCceecCceEEecCCCcccEEEEEEecC--CceEEE-----ECCEEEEEEeccc-cccceeeeee
Confidence 44456554444699888765333334568887654333 532221 1124444455532 2346888864
No 97
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=21.30 E-value=69 Score=27.58 Aligned_cols=12 Identities=33% Similarity=0.337 Sum_probs=6.3
Q ss_pred cchhHHHHHHHH
Q 007857 9 MTSPALMVLLCC 20 (587)
Q Consensus 9 ~~~~~~~~~~~~ 20 (587)
|+|-.+++|.++
T Consensus 1 MaSK~~llL~l~ 12 (95)
T PF07172_consen 1 MASKAFLLLGLL 12 (95)
T ss_pred CchhHHHHHHHH
Confidence 556655554443
Done!