Query 007862
Match_columns 587
No_of_seqs 155 out of 1538
Neff 7.5
Searched_HMMs 46136
Date Thu Mar 28 16:20:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.5E-54 3.2E-59 480.2 33.6 535 12-570 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 4.5E-39 9.7E-44 341.7 27.3 465 6-563 10-489 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1.3E-37 2.8E-42 343.3 34.1 457 11-566 8-481 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 1.4E-37 3.1E-42 342.0 33.5 453 9-565 2-472 (475)
5 PRK15462 dipeptide/tripeptide 100.0 2.3E-35 4.9E-40 322.7 32.0 455 11-553 3-469 (493)
6 PRK09584 tppB putative tripept 100.0 6.9E-35 1.5E-39 322.7 32.7 459 13-566 17-484 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 2.4E-29 5.2E-34 283.9 32.5 332 31-441 1-339 (654)
8 PRK05122 major facilitator sup 99.9 4.4E-23 9.4E-28 221.0 27.5 380 11-561 9-389 (399)
9 PRK10489 enterobactin exporter 99.9 1.8E-23 4E-28 225.7 24.6 399 17-578 17-416 (417)
10 PRK03545 putative arabinose tr 99.9 2.4E-23 5.2E-28 222.8 25.1 375 13-562 5-381 (390)
11 PF00854 PTR2: POT family; In 99.9 5.7E-25 1.2E-29 234.6 9.7 367 84-504 1-370 (372)
12 PRK12382 putative transporter; 99.9 1.1E-22 2.4E-27 217.5 26.4 373 17-560 15-388 (392)
13 PRK11551 putative 3-hydroxyphe 99.9 2E-22 4.3E-27 216.3 26.8 174 14-233 12-185 (406)
14 PRK10504 putative transporter; 99.9 1.8E-22 3.9E-27 221.2 26.3 176 16-237 9-184 (471)
15 PRK11646 multidrug resistance 99.9 9.4E-23 2E-27 219.6 23.3 168 20-233 13-180 (400)
16 PRK10054 putative transporter; 99.9 1.1E-22 2.4E-27 218.7 23.0 174 15-234 5-178 (395)
17 PRK10077 xylE D-xylose transpo 99.9 1.9E-22 4.1E-27 221.2 24.0 189 13-235 8-212 (479)
18 PRK14995 methyl viologen resis 99.9 2.8E-22 6.1E-27 221.9 23.3 397 15-519 4-412 (495)
19 TIGR00893 2A0114 d-galactonate 99.9 2.9E-22 6.2E-27 210.8 22.1 156 36-236 12-167 (399)
20 TIGR01299 synapt_SV2 synaptic 99.9 5.8E-22 1.3E-26 226.8 25.6 154 36-234 185-351 (742)
21 PRK11663 regulatory protein Uh 99.9 3.7E-22 8.1E-27 217.1 23.1 164 23-232 29-192 (434)
22 PRK09874 drug efflux system pr 99.9 5.4E-22 1.2E-26 212.5 22.2 391 8-563 4-400 (408)
23 PRK15402 multidrug efflux syst 99.9 2E-21 4.3E-26 208.9 25.9 176 14-235 7-185 (406)
24 TIGR00892 2A0113 monocarboxyla 99.9 8.2E-22 1.8E-26 215.9 23.2 151 40-236 41-192 (455)
25 PRK09705 cynX putative cyanate 99.9 1.7E-21 3.6E-26 209.3 25.1 370 22-566 14-386 (393)
26 COG2814 AraJ Arabinose efflux 99.9 3.1E-21 6.7E-26 203.5 25.9 186 8-239 4-189 (394)
27 PRK09556 uhpT sugar phosphate 99.9 3E-22 6.5E-27 219.9 18.1 177 19-235 27-209 (467)
28 TIGR00879 SP MFS transporter, 99.9 1.2E-21 2.7E-26 211.9 22.2 153 40-234 50-213 (481)
29 PRK10642 proline/glycine betai 99.9 3.7E-21 8E-26 212.7 26.2 176 16-229 15-204 (490)
30 TIGR00903 2A0129 major facilit 99.9 3.7E-21 7.9E-26 205.2 24.6 157 34-236 7-163 (368)
31 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.7E-21 3.7E-26 210.6 21.4 178 13-236 4-187 (412)
32 TIGR00711 efflux_EmrB drug res 99.9 2.3E-21 5.1E-26 212.5 22.5 391 21-519 6-409 (485)
33 TIGR00890 2A0111 Oxalate/Forma 99.9 1.4E-21 3E-26 205.2 19.6 154 37-236 22-175 (377)
34 PRK10406 alpha-ketoglutarate t 99.9 8.8E-21 1.9E-25 206.1 26.5 168 25-230 30-211 (432)
35 TIGR00891 2A0112 putative sial 99.9 3E-21 6.4E-26 205.5 21.9 175 11-231 6-182 (405)
36 PRK12307 putative sialic acid 99.9 1.3E-21 2.9E-26 211.2 19.1 168 13-226 14-181 (426)
37 PRK10213 nepI ribonucleoside t 99.9 8.6E-21 1.9E-25 204.0 25.0 174 12-231 15-188 (394)
38 TIGR00900 2A0121 H+ Antiporter 99.9 3.6E-21 7.8E-26 201.4 21.6 359 21-519 3-362 (365)
39 PRK03699 putative transporter; 99.9 2.5E-20 5.4E-25 200.0 28.2 176 13-234 3-179 (394)
40 cd06174 MFS The Major Facilita 99.9 9.6E-21 2.1E-25 196.3 23.9 345 21-558 3-349 (352)
41 PF07690 MFS_1: Major Facilita 99.9 4.4E-22 9.4E-27 207.5 13.9 166 24-234 3-168 (352)
42 TIGR00899 2A0120 sugar efflux 99.9 1.1E-20 2.3E-25 199.8 24.3 171 23-236 3-174 (375)
43 PRK11273 glpT sn-glycerol-3-ph 99.9 3.9E-21 8.4E-26 210.2 21.1 173 20-234 28-204 (452)
44 TIGR00710 efflux_Bcr_CflA drug 99.9 1.1E-20 2.4E-25 200.2 23.2 175 16-236 4-178 (385)
45 TIGR00897 2A0118 polyol permea 99.9 8.6E-20 1.9E-24 196.4 29.5 176 8-225 4-180 (402)
46 PRK09952 shikimate transporter 99.9 9.5E-20 2.1E-24 198.6 28.1 180 12-229 17-211 (438)
47 PRK10091 MFS transport protein 99.9 4E-20 8.6E-25 197.6 24.4 171 17-233 3-173 (382)
48 TIGR00895 2A0115 benzoate tran 99.9 2.4E-20 5.2E-25 197.5 22.5 174 13-232 13-186 (398)
49 TIGR00887 2A0109 phosphate:H+ 99.9 3.9E-20 8.4E-25 205.1 25.0 146 49-233 52-220 (502)
50 PRK03633 putative MFS family t 99.9 3.1E-20 6.8E-25 198.2 23.1 157 16-218 5-161 (381)
51 TIGR00898 2A0119 cation transp 99.9 1.3E-20 2.8E-25 208.5 20.8 147 42-236 113-262 (505)
52 PRK03893 putative sialic acid 99.9 3.2E-20 7E-25 204.5 23.5 170 13-228 16-185 (496)
53 PRK15403 multidrug efflux syst 99.9 8.7E-20 1.9E-24 197.4 25.5 148 43-235 41-188 (413)
54 KOG1330 Sugar transporter/spin 99.9 1.3E-21 2.9E-26 206.0 10.9 184 10-239 26-210 (493)
55 TIGR00894 2A0114euk Na(+)-depe 99.9 3.9E-20 8.5E-25 202.7 22.1 147 47-236 70-217 (465)
56 PRK11652 emrD multidrug resist 99.9 1.3E-19 2.8E-24 194.0 25.6 176 12-233 3-178 (394)
57 PLN00028 nitrate transmembrane 99.8 4.3E-20 9.3E-25 203.5 21.0 173 17-236 36-217 (476)
58 PRK11195 lysophospholipid tran 99.8 1.7E-19 3.7E-24 193.8 24.5 163 18-230 4-166 (393)
59 PRK15011 sugar efflux transpor 99.8 3.2E-19 7E-24 191.4 26.4 181 12-236 10-192 (393)
60 PRK09528 lacY galactoside perm 99.8 8.1E-20 1.8E-24 197.6 21.3 392 17-561 10-403 (420)
61 TIGR00881 2A0104 phosphoglycer 99.8 4.7E-20 1E-24 193.7 18.9 155 36-235 13-168 (379)
62 TIGR00712 glpT glycerol-3-phos 99.8 8.4E-20 1.8E-24 198.8 21.0 157 38-236 47-204 (438)
63 PRK15075 citrate-proton sympor 99.8 2.8E-19 6E-24 194.5 23.8 173 15-225 13-199 (434)
64 COG2271 UhpC Sugar phosphate p 99.8 5.2E-20 1.1E-24 192.4 17.0 172 20-236 28-204 (448)
65 PRK11043 putative transporter; 99.8 5.8E-19 1.3E-23 189.4 25.2 162 29-235 15-178 (401)
66 PRK10473 multidrug efflux syst 99.8 1.7E-18 3.6E-23 185.3 25.8 168 21-234 7-174 (392)
67 PRK11102 bicyclomycin/multidru 99.8 6.3E-19 1.4E-23 186.9 20.9 153 36-234 10-162 (377)
68 TIGR00882 2A0105 oligosacchari 99.8 1.9E-18 4.1E-23 185.3 24.3 389 17-558 2-392 (396)
69 KOG2532 Permease of the major 99.8 2.7E-19 5.8E-24 195.4 16.6 377 46-561 66-447 (466)
70 PRK10133 L-fucose transporter; 99.8 4.9E-18 1.1E-22 185.3 26.5 159 7-211 15-177 (438)
71 TIGR00902 2A0127 phenyl propri 99.8 6.6E-18 1.4E-22 180.5 27.0 359 20-555 7-373 (382)
72 KOG0254 Predicted transporter 99.8 1.5E-18 3.3E-23 193.0 20.6 417 35-574 64-496 (513)
73 PRK08633 2-acyl-glycerophospho 99.8 4.4E-18 9.5E-23 206.1 25.5 157 15-213 7-165 (1146)
74 KOG0569 Permease of the major 99.8 4.3E-19 9.3E-24 192.5 13.7 398 55-572 62-465 (485)
75 PRK15034 nitrate/nitrite trans 99.8 6.7E-18 1.4E-22 183.6 21.6 174 23-237 39-231 (462)
76 PRK11010 ampG muropeptide tran 99.8 5.2E-17 1.1E-21 179.8 29.1 176 15-235 10-192 (491)
77 TIGR00889 2A0110 nucleoside tr 99.8 3.6E-17 7.9E-22 177.3 27.2 394 21-563 6-404 (418)
78 PRK11128 putative 3-phenylprop 99.8 4E-17 8.7E-22 174.4 26.6 156 26-231 13-172 (382)
79 PRK06814 acylglycerophosphoeth 99.8 1.3E-17 2.7E-22 202.3 23.8 144 45-232 43-189 (1140)
80 COG2223 NarK Nitrate/nitrite t 99.8 9.3E-18 2E-22 175.8 19.1 392 11-563 8-403 (417)
81 TIGR00792 gph sugar (Glycoside 99.8 8.8E-17 1.9E-21 174.1 27.6 354 28-521 10-381 (437)
82 TIGR00883 2A0106 metabolite-pr 99.8 3.1E-17 6.7E-22 173.2 23.5 157 39-232 14-185 (394)
83 TIGR00886 2A0108 nitrite extru 99.8 2.7E-18 5.8E-23 181.0 15.0 164 18-226 2-176 (366)
84 TIGR00896 CynX cyanate transpo 99.8 1.5E-17 3.2E-22 175.5 19.7 155 28-229 10-166 (355)
85 PF05977 MFS_3: Transmembrane 99.8 5.3E-17 1.1E-21 180.1 24.3 360 17-520 10-369 (524)
86 TIGR00901 2A0125 AmpG-related 99.7 2.5E-16 5.5E-21 166.0 22.6 159 34-235 4-175 (356)
87 PF00083 Sugar_tr: Sugar (and 99.7 5.8E-21 1.2E-25 207.9 -14.0 138 53-232 46-186 (451)
88 TIGR00885 fucP L-fucose:H+ sym 99.7 6.5E-16 1.4E-20 167.2 24.8 158 34-233 19-202 (410)
89 PRK11902 ampG muropeptide tran 99.7 2.7E-15 5.8E-20 161.5 28.5 152 36-232 18-176 (402)
90 PRK09848 glucuronide transport 99.7 1.7E-14 3.6E-19 157.6 27.6 151 24-210 15-174 (448)
91 TIGR01301 GPH_sucrose GPH fami 99.7 5.2E-15 1.1E-19 162.0 23.4 435 22-564 9-474 (477)
92 TIGR00788 fbt folate/biopterin 99.7 2.7E-14 5.9E-19 157.2 28.7 176 13-232 21-203 (468)
93 KOG0255 Synaptic vesicle trans 99.7 1.1E-14 2.3E-19 162.2 25.6 141 45-233 110-250 (521)
94 PRK09669 putative symporter Ya 99.7 2.4E-14 5.1E-19 156.3 25.5 184 15-235 7-201 (444)
95 PRK10429 melibiose:sodium symp 99.6 3.1E-14 6.8E-19 156.8 26.2 172 24-233 13-196 (473)
96 PF06609 TRI12: Fungal trichot 99.6 5.3E-14 1.2E-18 156.6 27.6 152 38-236 64-215 (599)
97 KOG0252 Inorganic phosphate tr 99.6 9.3E-16 2E-20 161.5 10.8 403 50-572 81-508 (538)
98 KOG2504 Monocarboxylate transp 99.6 1.6E-14 3.5E-19 159.7 20.3 419 20-561 45-476 (509)
99 TIGR00805 oat sodium-independe 99.6 4.1E-15 8.8E-20 169.3 15.8 204 14-236 29-279 (633)
100 KOG2615 Permease of the major 99.6 9.1E-15 2E-19 150.9 16.5 118 49-212 64-181 (451)
101 TIGR02718 sider_RhtX_FptX side 99.6 2E-13 4.3E-18 146.2 26.6 171 22-236 6-182 (390)
102 KOG3764 Vesicular amine transp 99.6 1.5E-14 3.3E-19 150.1 14.7 149 46-238 99-247 (464)
103 TIGR00806 rfc RFC reduced fola 99.6 9.2E-14 2E-18 149.6 21.3 156 35-237 43-202 (511)
104 COG0738 FucP Fucose permease [ 99.6 3.2E-13 6.9E-18 141.1 22.8 159 11-212 6-165 (422)
105 PF13347 MFS_2: MFS/sugar tran 99.6 1.4E-13 3E-18 149.6 20.7 357 27-522 11-386 (428)
106 PTZ00207 hypothetical protein; 99.6 1.3E-12 2.9E-17 146.1 27.6 177 13-234 24-201 (591)
107 PF03825 Nuc_H_symport: Nucleo 99.5 1.6E-12 3.4E-17 140.2 25.2 382 20-562 5-396 (400)
108 KOG0253 Synaptic vesicle trans 99.5 9.6E-13 2.1E-17 135.2 21.0 198 24-271 84-283 (528)
109 PRK11462 putative transporter; 99.5 3.3E-12 7.2E-17 140.4 25.1 173 24-233 16-199 (460)
110 KOG2533 Permease of the major 99.5 6.1E-13 1.3E-17 146.1 18.7 151 44-239 72-228 (495)
111 PF01306 LacY_symp: LacY proto 99.5 1.3E-12 2.9E-17 139.5 20.6 393 17-562 7-401 (412)
112 COG2807 CynX Cyanate permease 99.4 1.7E-11 3.6E-16 126.7 22.5 174 16-237 11-185 (395)
113 PRK15011 sugar efflux transpor 99.4 4.6E-12 1E-16 136.0 13.4 177 14-236 213-389 (393)
114 COG2211 MelB Na+/melibiose sym 99.3 6.1E-10 1.3E-14 120.5 25.7 373 11-521 6-397 (467)
115 PRK10642 proline/glycine betai 99.3 1.6E-11 3.4E-16 135.9 12.9 178 16-236 249-428 (490)
116 PRK05122 major facilitator sup 99.3 1.1E-11 2.3E-16 132.9 10.2 167 28-242 227-393 (399)
117 TIGR00899 2A0120 sugar efflux 99.3 1.7E-11 3.6E-16 129.5 11.4 171 20-236 202-372 (375)
118 cd06174 MFS The Major Facilita 99.3 2.7E-11 5.9E-16 125.4 12.1 172 18-234 176-348 (352)
119 TIGR00890 2A0111 Oxalate/Forma 99.3 1.7E-11 3.7E-16 128.6 10.3 168 20-231 208-375 (377)
120 PRK09556 uhpT sugar phosphate 99.3 1.7E-11 3.7E-16 134.8 10.5 175 18-235 259-446 (467)
121 PF11700 ATG22: Vacuole efflux 99.2 1.7E-09 3.7E-14 119.1 25.3 84 461-559 383-466 (477)
122 PRK03699 putative transporter; 99.2 3.4E-11 7.5E-16 129.2 10.6 170 19-234 207-376 (394)
123 PRK12382 putative transporter; 99.2 3.2E-11 6.9E-16 129.0 10.2 161 28-236 227-387 (392)
124 PRK09874 drug efflux system pr 99.2 5.7E-11 1.2E-15 127.2 11.6 170 22-236 224-396 (408)
125 PF03209 PUCC: PUCC protein; 99.2 3E-09 6.4E-14 112.5 23.8 346 44-521 6-364 (403)
126 PRK09952 shikimate transporter 99.2 6.1E-11 1.3E-15 129.4 11.5 180 16-236 249-431 (438)
127 TIGR00893 2A0114 d-galactonate 99.2 1.3E-10 2.8E-15 122.1 13.6 172 17-234 215-395 (399)
128 TIGR00889 2A0110 nucleoside tr 99.2 5.9E-11 1.3E-15 128.8 10.3 178 20-239 211-403 (418)
129 TIGR00891 2A0112 putative sial 99.2 8E-11 1.7E-15 125.2 10.4 157 22-222 243-400 (405)
130 TIGR00883 2A0106 metabolite-pr 99.2 5.3E-11 1.1E-15 125.6 8.4 168 18-227 220-390 (394)
131 PRK09705 cynX putative cyanate 99.2 2.8E-10 6E-15 122.3 13.3 175 19-239 207-382 (393)
132 PRK03545 putative arabinose tr 99.1 3.3E-10 7.1E-15 121.3 13.7 174 20-239 208-381 (390)
133 TIGR00880 2_A_01_02 Multidrug 99.1 2E-11 4.4E-16 109.1 3.4 132 60-236 5-136 (141)
134 PRK03893 putative sialic acid 99.1 3.3E-10 7.1E-15 125.0 13.4 149 34-225 292-440 (496)
135 PRK09528 lacY galactoside perm 99.1 9.5E-11 2.1E-15 126.8 8.8 159 31-234 237-399 (420)
136 PRK11551 putative 3-hydroxyphe 99.1 3.1E-10 6.8E-15 121.7 11.9 164 26-235 229-393 (406)
137 KOG4686 Predicted sugar transp 99.1 1.5E-10 3.2E-15 115.5 8.4 135 39-214 65-199 (459)
138 TIGR00902 2A0127 phenyl propri 99.1 2.5E-10 5.3E-15 122.1 10.9 169 17-233 205-374 (382)
139 TIGR01299 synapt_SV2 synaptic 99.1 2.1E-10 4.5E-15 132.1 10.2 134 57-236 599-732 (742)
140 PRK10489 enterobactin exporter 99.1 3.2E-10 7E-15 122.5 11.1 159 33-236 239-397 (417)
141 PRK03633 putative MFS family t 99.1 2.9E-10 6.3E-15 121.4 10.6 160 28-236 211-370 (381)
142 TIGR00892 2A0113 monocarboxyla 99.1 6.9E-10 1.5E-14 121.8 12.9 172 19-235 243-418 (455)
143 PRK11273 glpT sn-glycerol-3-ph 99.1 3.6E-10 7.8E-15 123.8 10.1 175 18-235 254-432 (452)
144 PRK15075 citrate-proton sympor 99.1 6.5E-10 1.4E-14 121.0 10.9 153 24-217 245-398 (434)
145 TIGR00897 2A0118 polyol permea 99.0 1.4E-09 2.9E-14 117.3 12.9 175 19-236 224-399 (402)
146 TIGR00879 SP MFS transporter, 99.0 1.2E-09 2.6E-14 118.2 12.2 168 36-237 302-469 (481)
147 PRK11663 regulatory protein Uh 99.0 9.1E-10 2E-14 120.0 11.2 172 19-236 245-422 (434)
148 PF11700 ATG22: Vacuole efflux 99.0 1.1E-09 2.3E-14 120.8 11.3 182 17-236 281-466 (477)
149 PRK11010 ampG muropeptide tran 99.0 1.4E-09 3E-14 120.7 12.2 180 19-239 224-404 (491)
150 KOG2325 Predicted transporter/ 99.0 5.5E-10 1.2E-14 121.1 8.7 159 11-210 28-188 (488)
151 TIGR01272 gluP glucose/galacto 99.0 9.3E-09 2E-13 107.2 17.7 81 143-229 8-104 (310)
152 COG2271 UhpC Sugar phosphate p 99.0 1.1E-09 2.3E-14 115.5 10.2 178 17-236 252-432 (448)
153 COG2223 NarK Nitrate/nitrite t 99.0 1.4E-09 3.1E-14 114.7 10.9 185 16-239 217-402 (417)
154 PRK10406 alpha-ketoglutarate t 99.0 1.8E-09 3.8E-14 117.5 11.7 168 27-236 253-422 (432)
155 KOG2563 Permease of the major 99.0 9.9E-09 2.1E-13 109.0 15.6 162 39-240 66-237 (480)
156 COG2814 AraJ Arabinose efflux 99.0 5.6E-09 1.2E-13 110.9 13.2 178 17-240 211-388 (394)
157 PF03092 BT1: BT1 family; Int 99.0 4E-08 8.7E-13 107.3 20.3 161 40-239 12-176 (433)
158 TIGR00712 glpT glycerol-3-phos 99.0 3E-09 6.6E-14 115.9 11.5 180 18-239 252-434 (438)
159 PF03137 OATP: Organic Anion T 99.0 9.7E-11 2.1E-15 130.7 -0.4 202 21-241 6-253 (539)
160 KOG4686 Predicted sugar transp 98.9 6.9E-09 1.5E-13 103.7 11.6 168 13-226 260-430 (459)
161 PLN00028 nitrate transmembrane 98.9 8.9E-09 1.9E-13 113.7 13.1 164 28-238 263-433 (476)
162 PRK10077 xylE D-xylose transpo 98.9 1.2E-08 2.5E-13 112.1 13.6 157 40-237 293-456 (479)
163 TIGR01272 gluP glucose/galacto 98.9 4.2E-09 9.2E-14 109.8 9.6 161 18-226 141-303 (310)
164 TIGR02332 HpaX 4-hydroxyphenyl 98.9 5.6E-09 1.2E-13 113.1 10.9 163 19-226 244-409 (412)
165 COG2270 Permeases of the major 98.9 3.5E-08 7.5E-13 104.4 16.2 131 35-206 33-170 (438)
166 TIGR00881 2A0104 phosphoglycer 98.9 4E-09 8.7E-14 110.6 9.3 161 18-220 217-379 (379)
167 PRK10091 MFS transport protein 98.9 5.1E-09 1.1E-13 111.9 10.2 170 20-234 202-372 (382)
168 TIGR00900 2A0121 H+ Antiporter 98.9 3.7E-09 7.9E-14 110.5 8.8 154 18-215 211-365 (365)
169 KOG2816 Predicted transporter 98.9 1.8E-07 4E-12 102.4 22.3 361 19-521 20-393 (463)
170 PRK11128 putative 3-phenylprop 98.9 6.6E-09 1.4E-13 111.1 10.6 166 17-230 205-371 (382)
171 TIGR00792 gph sugar (Glycoside 98.9 4.4E-09 9.5E-14 113.9 9.1 160 18-216 223-383 (437)
172 PRK15402 multidrug efflux syst 98.9 2.1E-08 4.4E-13 107.9 14.1 172 20-232 218-389 (406)
173 PRK10504 putative transporter; 98.9 1E-08 2.3E-13 112.5 11.7 158 17-216 261-418 (471)
174 TIGR00882 2A0105 oligosacchari 98.8 9.5E-09 2.1E-13 110.2 10.0 167 20-231 218-388 (396)
175 KOG3626 Organic anion transpor 98.8 7E-08 1.5E-12 109.0 16.3 208 14-241 93-346 (735)
176 TIGR00887 2A0109 phosphate:H+ 98.8 9.8E-09 2.1E-13 114.0 9.4 164 28-233 299-484 (502)
177 TIGR00895 2A0115 benzoate tran 98.8 8E-09 1.7E-13 109.3 8.1 145 20-210 253-397 (398)
178 TIGR00711 efflux_EmrB drug res 98.8 9.5E-09 2E-13 112.8 8.9 156 17-213 255-410 (485)
179 TIGR00894 2A0114euk Na(+)-depe 98.8 2.3E-08 4.9E-13 109.8 11.8 177 17-236 261-448 (465)
180 TIGR02718 sider_RhtX_FptX side 98.8 2.1E-08 4.6E-13 107.3 11.2 175 18-232 209-385 (390)
181 PF13347 MFS_2: MFS/sugar tran 98.8 3.8E-08 8.3E-13 106.9 12.4 162 17-216 225-387 (428)
182 PRK12307 putative sialic acid 98.8 2.7E-08 5.8E-13 107.5 11.1 142 34-219 248-389 (426)
183 TIGR00896 CynX cyanate transpo 98.8 2E-08 4.3E-13 105.9 9.3 151 19-215 199-350 (355)
184 PRK10054 putative transporter; 98.8 2.1E-08 4.6E-13 108.0 9.4 172 17-233 206-379 (395)
185 TIGR00710 efflux_Bcr_CflA drug 98.8 6.3E-08 1.4E-12 102.5 12.8 162 20-223 209-371 (385)
186 PRK11902 ampG muropeptide tran 98.8 5.5E-08 1.2E-12 104.7 12.2 170 21-235 213-387 (402)
187 PRK10133 L-fucose transporter; 98.7 4.1E-08 9E-13 107.3 11.0 165 21-233 262-428 (438)
188 PF05977 MFS_3: Transmembrane 98.7 5.1E-08 1.1E-12 108.7 11.8 172 19-235 220-391 (524)
189 PRK08633 2-acyl-glycerophospho 98.7 6.2E-08 1.3E-12 117.9 12.6 162 20-226 235-398 (1146)
190 PRK14995 methyl viologen resis 98.7 3.5E-08 7.6E-13 109.5 9.6 153 18-212 260-412 (495)
191 PRK10213 nepI ribonucleoside t 98.7 1.1E-07 2.3E-12 102.4 12.3 165 19-229 218-382 (394)
192 PRK09848 glucuronide transport 98.7 4.3E-08 9.2E-13 107.2 8.6 163 17-216 228-391 (448)
193 PRK06814 acylglycerophosphoeth 98.7 1E-07 2.3E-12 116.1 12.1 182 17-226 225-410 (1140)
194 COG2270 Permeases of the major 98.6 8.5E-08 1.8E-12 101.5 8.7 172 17-233 252-424 (438)
195 PRK11646 multidrug resistance 98.6 1.3E-07 2.9E-12 101.9 10.4 153 36-233 227-383 (400)
196 PRK15034 nitrate/nitrite trans 98.6 1.6E-07 3.5E-12 102.7 10.8 185 18-237 253-453 (462)
197 KOG3762 Predicted transporter 98.6 3.7E-06 8E-11 91.3 20.0 139 382-562 409-548 (618)
198 TIGR00901 2A0125 AmpG-related 98.6 7.9E-08 1.7E-12 101.3 7.0 143 19-197 211-355 (356)
199 PF07690 MFS_1: Major Facilita 98.6 1.5E-07 3.2E-12 98.0 8.0 141 22-204 211-352 (352)
200 PRK10429 melibiose:sodium symp 98.5 1.8E-07 3.9E-12 103.3 9.0 165 17-216 231-396 (473)
201 PRK11195 lysophospholipid tran 98.5 8.8E-07 1.9E-11 95.3 12.8 158 30-233 218-375 (393)
202 KOG3098 Uncharacterized conser 98.5 3.1E-05 6.6E-10 84.3 23.8 160 382-566 278-440 (461)
203 PF05631 DUF791: Protein of un 98.5 1.1E-06 2.5E-11 91.7 12.2 156 43-239 59-217 (354)
204 TIGR00898 2A0119 cation transp 98.5 1.9E-07 4.2E-12 103.3 7.0 143 46-236 351-493 (505)
205 PRK11102 bicyclomycin/multidru 98.5 1.2E-06 2.6E-11 92.8 12.5 146 21-208 198-344 (377)
206 PRK10473 multidrug efflux syst 98.5 6.5E-07 1.4E-11 95.7 10.5 62 34-96 220-281 (392)
207 TIGR00903 2A0129 major facilit 98.5 1.2E-06 2.5E-11 93.8 11.9 166 17-234 192-361 (368)
208 KOG2532 Permease of the major 98.4 1.8E-06 4E-11 94.8 13.2 176 17-236 258-445 (466)
209 PRK09669 putative symporter Ya 98.4 8.8E-07 1.9E-11 96.8 10.3 160 19-216 231-391 (444)
210 PF03825 Nuc_H_symport: Nucleo 98.4 1.7E-06 3.6E-11 93.6 11.5 179 19-237 209-394 (400)
211 KOG2504 Monocarboxylate transp 98.3 7.8E-07 1.7E-11 98.9 7.7 176 17-238 298-476 (509)
212 PRK11043 putative transporter; 98.3 2.8E-06 6.1E-11 91.1 11.4 148 29-218 215-362 (401)
213 TIGR00880 2_A_01_02 Multidrug 98.3 1.5E-05 3.4E-10 70.7 14.4 132 387-560 6-137 (141)
214 COG2807 CynX Cyanate permease 98.3 4.9E-06 1.1E-10 86.7 11.4 165 19-228 210-375 (395)
215 TIGR00886 2A0108 nitrite extru 98.3 2.3E-06 5E-11 90.0 8.9 139 19-199 227-365 (366)
216 TIGR00924 yjdL_sub1_fam amino 98.2 2.5E-06 5.4E-11 94.4 8.1 185 18-237 273-467 (475)
217 TIGR00885 fucP L-fucose:H+ sym 98.2 4.4E-06 9.5E-11 90.6 9.0 162 19-228 234-402 (410)
218 KOG0569 Permease of the major 98.2 8.4E-06 1.8E-10 89.4 11.1 185 18-239 270-455 (485)
219 COG2211 MelB Na+/melibiose sym 98.2 2.1E-05 4.5E-10 85.7 13.2 155 22-213 241-396 (467)
220 PRK11652 emrD multidrug resist 98.1 2.1E-05 4.6E-10 84.1 12.2 141 37-220 227-367 (394)
221 PRK11462 putative transporter; 98.1 1.8E-05 4E-10 87.1 11.5 158 21-216 232-390 (460)
222 COG0477 ProP Permeases of the 98.1 1.9E-05 4.2E-10 78.3 10.6 147 40-228 24-175 (338)
223 KOG3764 Vesicular amine transp 98.0 1.2E-05 2.5E-10 84.7 8.1 144 382-567 109-253 (464)
224 PF06813 Nodulin-like: Nodulin 98.0 5.1E-05 1.1E-09 76.5 11.7 133 39-211 23-155 (250)
225 KOG1330 Sugar transporter/spin 98.0 1.6E-06 3.4E-11 92.8 0.7 145 382-567 71-215 (493)
226 KOG0253 Synaptic vesicle trans 98.0 2.2E-05 4.8E-10 81.8 8.9 169 18-233 327-514 (528)
227 PF01306 LacY_symp: LacY proto 97.9 2.3E-05 5E-10 84.3 7.2 173 17-234 220-396 (412)
228 PRK15403 multidrug efflux syst 97.9 0.00018 4E-09 77.9 14.4 136 387-564 59-194 (413)
229 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00012 2.6E-09 60.2 8.7 69 24-94 7-75 (77)
230 PF03209 PUCC: PUCC protein; 97.8 7.4E-05 1.6E-09 79.5 9.3 169 25-234 216-394 (403)
231 PF00083 Sugar_tr: Sugar (and 97.8 4.2E-07 9.1E-12 99.0 -8.5 179 18-234 253-432 (451)
232 PRK10207 dipeptide/tripeptide 97.7 4.1E-05 8.9E-10 85.0 6.2 175 26-236 278-474 (489)
233 PF02487 CLN3: CLN3 protein; 97.7 0.0066 1.4E-07 65.3 21.8 131 55-235 61-192 (402)
234 TIGR00788 fbt folate/biopterin 97.7 6.7E-05 1.5E-09 82.9 6.4 134 45-215 280-415 (468)
235 PRK09584 tppB putative tripept 97.6 9.6E-05 2.1E-09 82.3 7.5 169 26-230 281-471 (500)
236 KOG4332 Predicted sugar transp 97.6 0.00069 1.5E-08 68.0 11.5 142 42-231 61-213 (454)
237 TIGR00805 oat sodium-independe 97.5 0.00037 8E-09 79.9 10.6 127 382-519 71-233 (633)
238 PRK15462 dipeptide/tripeptide 97.5 0.00066 1.4E-08 75.3 11.5 130 393-563 59-191 (493)
239 KOG3762 Predicted transporter 97.5 7.2E-05 1.6E-09 81.5 3.7 162 34-240 387-549 (618)
240 TIGR01301 GPH_sucrose GPH fami 97.5 0.00039 8.4E-09 76.8 9.4 205 13-239 254-472 (477)
241 TIGR00806 rfc RFC reduced fola 97.4 0.0027 5.8E-08 69.6 14.7 106 386-518 69-174 (511)
242 KOG2533 Permease of the major 97.4 0.00021 4.5E-09 79.2 5.5 163 19-223 275-441 (495)
243 COG0738 FucP Fucose permease [ 97.3 0.00064 1.4E-08 72.1 8.5 147 34-228 253-399 (422)
244 KOG0254 Predicted transporter 97.3 0.0011 2.3E-08 74.2 9.8 187 13-232 290-476 (513)
245 KOG0637 Sucrose transporter an 97.1 0.00017 3.8E-09 77.2 1.3 168 17-210 32-202 (498)
246 PTZ00207 hypothetical protein; 97.1 0.0072 1.6E-07 68.5 14.2 124 405-562 83-206 (591)
247 PF01770 Folate_carrier: Reduc 96.9 0.0083 1.8E-07 64.6 12.3 156 36-237 22-181 (412)
248 PF06609 TRI12: Fungal trichot 96.9 0.0085 1.8E-07 67.7 12.4 138 381-561 80-217 (599)
249 PF06963 FPN1: Ferroportin1 (F 96.7 0.16 3.5E-06 55.4 19.9 60 456-515 354-413 (432)
250 KOG0252 Inorganic phosphate tr 96.6 0.0016 3.4E-08 70.2 3.4 170 25-235 312-495 (538)
251 TIGR00926 2A1704 Peptide:H+ sy 96.6 0.02 4.4E-07 65.8 12.7 316 48-445 15-340 (654)
252 KOG2615 Permease of the major 96.5 0.0046 9.9E-08 65.3 6.5 151 18-212 261-413 (451)
253 KOG3574 Acetyl-CoA transporter 96.5 0.22 4.8E-06 52.8 18.6 112 460-571 371-498 (510)
254 PF05978 UNC-93: Ion channel r 96.5 0.014 3E-07 54.7 8.5 112 51-208 35-146 (156)
255 KOG2325 Predicted transporter/ 96.4 0.055 1.2E-06 59.6 13.9 160 382-565 74-233 (488)
256 KOG0255 Synaptic vesicle trans 96.3 0.013 2.9E-07 65.3 9.2 126 386-556 125-250 (521)
257 PF00854 PTR2: POT family; In 95.8 0.05 1.1E-06 58.0 10.1 125 421-567 2-129 (372)
258 COG3104 PTR2 Dipeptide/tripept 95.8 0.019 4E-07 62.8 6.6 122 418-568 90-213 (498)
259 KOG3626 Organic anion transpor 95.7 0.052 1.1E-06 62.3 10.3 169 381-566 134-348 (735)
260 PRK03612 spermidine synthase; 95.7 0.084 1.8E-06 59.2 11.6 175 22-236 19-196 (521)
261 TIGR00769 AAA ADP/ATP carrier 95.5 0.7 1.5E-05 51.1 17.8 163 16-211 6-189 (472)
262 PF06813 Nodulin-like: Nodulin 95.5 0.18 4E-06 50.9 12.1 92 418-518 64-155 (250)
263 PF06779 DUF1228: Protein of u 95.5 0.023 4.9E-07 47.5 4.6 66 39-117 13-78 (85)
264 KOG2563 Permease of the major 95.3 0.036 7.9E-07 59.8 6.7 156 46-244 294-456 (480)
265 PF03137 OATP: Organic Anion T 95.0 0.0053 1.1E-07 69.0 -0.9 168 382-566 41-255 (539)
266 KOG2816 Predicted transporter 94.9 0.02 4.4E-07 63.1 3.7 152 14-211 237-390 (463)
267 KOG3880 Predicted small molecu 93.2 9.3 0.0002 39.9 18.3 116 18-172 13-142 (409)
268 PF06963 FPN1: Ferroportin1 (F 92.4 0.59 1.3E-05 51.1 9.2 137 35-208 276-413 (432)
269 PF03092 BT1: BT1 family; Int 92.3 1.5 3.2E-05 48.0 12.3 118 418-563 57-177 (433)
270 PF05978 UNC-93: Ion channel r 91.9 1.9 4.1E-05 40.4 10.7 62 457-518 88-149 (156)
271 KOG1479 Nucleoside transporter 87.1 49 0.0011 35.9 19.8 58 457-514 342-399 (406)
272 KOG0637 Sucrose transporter an 86.2 3.4 7.4E-05 45.1 8.8 128 382-515 70-200 (498)
273 PF05631 DUF791: Protein of un 85.8 11 0.00023 40.1 12.3 95 455-563 118-218 (354)
274 TIGR00769 AAA ADP/ATP carrier 84.4 43 0.00093 37.2 16.8 58 461-518 131-189 (472)
275 KOG3097 Predicted membrane pro 83.9 6.8 0.00015 41.1 9.4 121 10-177 22-142 (390)
276 KOG3098 Uncharacterized conser 80.8 15 0.00032 40.5 11.3 114 68-209 294-410 (461)
277 PF01770 Folate_carrier: Reduc 80.6 51 0.0011 35.9 15.1 63 456-519 92-154 (412)
278 KOG4830 Predicted sugar transp 78.9 3.1 6.8E-05 42.1 4.8 74 11-87 12-94 (412)
279 COG3202 ATP/ADP translocase [E 75.8 93 0.002 34.6 15.3 141 44-212 49-209 (509)
280 PF13000 Acatn: Acetyl-coenzym 70.2 41 0.00089 37.5 11.1 41 477-517 137-177 (544)
281 PF02487 CLN3: CLN3 protein; 69.7 27 0.00059 37.9 9.6 110 418-562 87-196 (402)
282 PF03219 TLC: TLC ATP/ADP tran 69.1 2E+02 0.0043 32.2 18.1 49 471-519 157-205 (491)
283 COG0477 ProP Permeases of the 66.6 48 0.001 32.0 10.2 62 457-518 93-156 (338)
284 PF07672 MFS_Mycoplasma: Mycop 65.7 1.1E+02 0.0024 31.2 12.3 59 183-241 2-65 (267)
285 KOG4332 Predicted sugar transp 64.4 9.1 0.0002 39.2 4.3 85 143-233 342-426 (454)
286 TIGR00939 2a57 Equilibrative N 62.6 8.1 0.00018 42.4 4.0 56 146-207 373-428 (437)
287 TIGR00939 2a57 Equilibrative N 58.0 2.9E+02 0.0063 30.3 29.4 59 457-515 371-429 (437)
288 PRK03612 spermidine synthase; 52.9 2.4E+02 0.0051 31.8 13.7 53 466-519 118-170 (521)
289 COG3202 ATP/ADP translocase [E 52.3 3.8E+02 0.0082 30.0 14.5 49 471-519 161-209 (509)
290 KOG1237 H+/oligopeptide sympor 44.4 84 0.0018 35.9 8.4 134 418-567 102-251 (571)
291 KOG3574 Acetyl-CoA transporter 41.0 79 0.0017 34.3 6.9 110 389-511 77-186 (510)
292 COG5336 Uncharacterized protei 39.6 2.2E+02 0.0047 25.0 8.0 35 486-520 34-68 (116)
293 PF13000 Acatn: Acetyl-coenzym 31.5 1.9E+02 0.004 32.5 8.1 60 461-520 408-467 (544)
294 PF09527 ATPase_gene1: Putativ 28.2 1.3E+02 0.0027 22.6 4.5 37 60-96 7-43 (55)
295 PF06645 SPC12: Microsomal sig 27.5 95 0.0021 25.3 3.9 54 187-243 8-61 (76)
296 COG5336 Uncharacterized protei 25.7 1.5E+02 0.0032 26.0 4.8 38 59-96 48-85 (116)
297 PF03219 TLC: TLC ATP/ADP tran 24.9 1E+02 0.0022 34.5 4.9 69 156-229 293-361 (491)
298 PF07857 DUF1632: CEO family ( 22.6 2.9E+02 0.0063 28.0 7.2 23 489-511 74-96 (254)
299 KOG3810 Micronutrient transpor 21.9 2.3E+02 0.0049 30.5 6.3 95 456-560 324-420 (433)
300 PRK11469 hypothetical protein; 21.8 3.9E+02 0.0084 25.7 7.7 48 48-96 129-177 (188)
301 PF06912 DUF1275: Protein of u 21.8 6.7E+02 0.015 24.0 9.6 37 191-228 166-202 (209)
302 PF11872 DUF3392: Protein of u 20.8 2.1E+02 0.0047 24.9 5.0 64 9-79 41-105 (106)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-54 Score=480.23 Aligned_cols=535 Identities=45% Similarity=0.786 Sum_probs=486.0
Q ss_pred CCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHH
Q 007862 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (587)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 91 (587)
+.+.|++++++++++.+|++++|++..++..|++.++|.+...+...++.|.+...+.++++++++|.|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccc
Q 007862 92 IAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGV 171 (587)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 171 (587)
++..+ |+.++.+++.+|.+.++.| ..++.-..|+.++..+...++.++.+.++|+|+.+|+..++.+
T Consensus 112 ~i~~~------------G~~~lt~~a~~~~l~p~~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGa 178 (571)
T KOG1237|consen 112 LISLL------------GLFGLTLSAMIPALLPFMC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGA 178 (571)
T ss_pred HHHHH------------HHHHHHHHHHhhhcCCccc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcc
Confidence 99999 9999999999999999887 3333345799999999999999999999999999999999999
Q ss_pred ccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChh
Q 007862 172 DQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIF 251 (587)
Q Consensus 172 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (587)
||+|+..+++++.+.++|+|+|+..++|..++.++..|++++.+|.+.|.++.+.+.+++++++...+.|+.++|.++|+
T Consensus 179 dQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~ 258 (571)
T KOG1237|consen 179 DQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPK 258 (571)
T ss_pred cccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCch
Confidence 99998777788888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCcccccccee
Q 007862 252 SGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQ 331 (587)
Q Consensus 252 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 331 (587)
..+.+++..+.++++...+. ++... ...........+.++++++|++.+..+... .++...++|+.|+.++
T Consensus 259 t~i~~Vlvaa~~k~~~~~~~---~~~~~----~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~--~~~~~~~~w~lct~~~ 329 (571)
T KOG1237|consen 259 TRIGQVLVAAAFKRKAVVSL---DPEEL----YYDCTDSVAIEGTKPFRFLDKAALKTSDDL--KDGLDANPWRLCTVTQ 329 (571)
T ss_pred hHHHHHHHHHHHHHhccCCC---cchhc----cccccccccccCCcccchhhHhhccCCccc--ccccccCCccCCCcee
Confidence 99999999999999988776 43321 011111122344678899999988776333 5566778999999999
Q ss_pred eehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhh
Q 007862 332 VEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKIT 411 (587)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~ 411 (587)
+||.|++++.+|+|...+.+++++.|+.++.+.|...+|+..++.+++|++.+.....+..+++.|++|++..|+.+|++
T Consensus 330 Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t 409 (571)
T KOG1237|consen 330 VEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLT 409 (571)
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhc
Confidence 99999999999999999999999999999999999999999985599999999999999999999999999999999999
Q ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--CCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCc
Q 007862 412 KHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHL--HPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD 489 (587)
Q Consensus 412 ~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~--~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~ 489 (587)
+++.+++.++++.+|+++..+++...+..|..|.+.+.+ ....++|++|++|+|+++|++|.+.....+|+.++++|+
T Consensus 410 ~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~ 489 (571)
T KOG1237|consen 410 GNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPE 489 (571)
T ss_pred CCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCH
Confidence 988788999999999999999999999999988877654 224679999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCcc-CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007862 490 HMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLT-NDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKS 568 (587)
Q Consensus 490 ~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~~~ 568 (587)
+||+.+++++.+...+|++++.++..++...+.. ..+|+. +++|.++++++||+++....+....+..+.+++++++
T Consensus 490 sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~ 567 (571)
T KOG1237|consen 490 SMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKD 567 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecc
Confidence 9999999999999999999999999998876533 458999 9999999999999999999999999999998887765
Q ss_pred Cc
Q 007862 569 GI 570 (587)
Q Consensus 569 ~~ 570 (587)
.+
T Consensus 568 ~~ 569 (571)
T KOG1237|consen 568 DK 569 (571)
T ss_pred cc
Confidence 43
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-39 Score=341.71 Aligned_cols=465 Identities=20% Similarity=0.285 Sum_probs=351.7
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhC----CChhhHHHHHHHHHHHHHHHhhhhHHHhhccc
Q 007862 6 KQKDQKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYH----MNQTSAANILNIWGGVTNFAPLLGAFISDTYI 81 (587)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~----~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~ 81 (587)
++.+++.-++||.++.++.+|+.||++|||+...+..|+..+++ +|++++..+.+++....++.+++|||++||++
T Consensus 10 ~~~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~L 89 (498)
T COG3104 10 TTLEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVL 89 (498)
T ss_pred cccccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34455666899999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHhhhcccccccccceEEEeeec-cCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccc
Q 007862 82 GRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTA-WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTG 160 (587)
Q Consensus 82 Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g 160 (587)
|+||++..+.+++++ |.++++.+. . ....++++..++++|+|
T Consensus 90 G~~~tI~lGail~~i------------Gh~~L~~~~~~-------------------------~~~gl~i~L~~I~iG~G 132 (498)
T COG3104 90 GTRRTIVLGAILMAI------------GHLVLAISSVS-------------------------GPGGLYIGLALIIVGTG 132 (498)
T ss_pred chhHHHHHHHHHHHH------------HHHHHhccccc-------------------------cccHHHHHHHHHHhccc
Confidence 999999999999999 999888763 1 34569999999999999
Q ss_pred cccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccce
Q 007862 161 GIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKL 240 (587)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 240 (587)
+++|++.++++|++|+++| +|..+|+++|++.|+|++++|.+.+++.+.+||...|.++++-+.++++.++.+++.
T Consensus 133 l~K~NiS~llg~ly~~~Dp----rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 133 LFKPNISSLLGELYPKDDP----RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred cccccHHHHHHHhcCCCCc----ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccch
Confidence 9999999999999998764 399999999999999999999999999999999999999999999999999988876
Q ss_pred eeeeCC--CCChhh------hHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhH-HHHHhhhccC
Q 007862 241 YVLVEP--EGSIFS------GIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRF-LNKAAMIVDN 311 (587)
Q Consensus 241 ~~~~~~--~~~~~~------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~ 311 (587)
+..... +..+.. ....++....... .. . +...+..+. +....+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~---------------------~l~~~~~~~~~~~~~i~~~~ 264 (498)
T COG3104 209 VKGIGGVPDPNPLSFNFLLPVLGGLVVMILAAL-LT--L---------------------LLNQNTFSGVLLVISILIAI 264 (498)
T ss_pred hcCCCCCCCccchhhhhhhhhHHHHHHHHHHHH-HH--H---------------------HHHHHHHHHHHHHHHHHHHH
Confidence 654332 111110 0000000000000 00 0 000000000 0000000000
Q ss_pred CCCCCCCCCCCccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeee-ccccccCCCccccCcccccccchh
Q 007862 312 NELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQA-MKMNRHLGPKFQIPPGTVGVISMI 390 (587)
Q Consensus 312 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~i~~i 390 (587)
... ....+| .+.. +|+|+++..+++++...+||+.+.|+++.+..+. ...+++.. ++++|+++++++|++
T Consensus 265 ~~~----~~~~~~---~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~ 335 (498)
T COG3104 265 IYF----AEAFRS---PKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPF 335 (498)
T ss_pred HHH----HHHhcc---CccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHH
Confidence 000 000111 1112 6789999999999999999999999999654443 44555534 689999999999999
Q ss_pred hhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHH
Q 007862 391 TIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGF 470 (587)
Q Consensus 391 ~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ 470 (587)
.++++.|+.+++..|+.++. +.++...++..|+++++.+++.+........ +. ....|.+|++++|+++++
T Consensus 336 ~Iii~~pI~a~l~~~l~~~~----~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~---~~--~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 336 FIILFSPILAALWTKLGRGN----KQPSTPIKFALGLILAGLGFLILLLAGIWFG---GP--SGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHHHHHHHHHHHhHhhcCC----CCCCcchHHHHHHHHHHHHHHHHHHHHHhhc---CC--CCCcCHHHHHHHHHHHHH
Confidence 99999999999977766553 2357888999999999999988876633211 11 245799999999999999
Q ss_pred HHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHH
Q 007862 471 CEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLG 550 (587)
Q Consensus 471 ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~ 550 (587)
||.+.+|...+++++.+|+++++.++|+|.+.+..|+.++..+.+.... +.. ..+.......|+.++...
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~~---------~~~~~~~~~~F~~~g~v~ 476 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-TDP---------AYTAFIEGRVFGTIGVVA 476 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-cch---------hhhhhhhhhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999877663221 000 001112345677777777
Q ss_pred HHHHHHHHHHHhh
Q 007862 551 GLNIVYFLYCARR 563 (587)
Q Consensus 551 ~l~~v~~~~~~~~ 563 (587)
++..+..+...++
T Consensus 477 i~~~~~~~~~~~~ 489 (498)
T COG3104 477 IVIGILLLLLSPK 489 (498)
T ss_pred HHHHHHHHHhhHH
Confidence 7766665555544
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1.3e-37 Score=343.27 Aligned_cols=457 Identities=12% Similarity=0.178 Sum_probs=332.1
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHH
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 90 (587)
++++|||.++.++..+++||+++|++..+++.|+++++|+++++++++.+.+....++.++++|+++||++||||+++++
T Consensus 8 ~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 8 GLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred chhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999955999999999
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
.+++.+ |.+.++++.. ....++++|.++++|.|...|+..+++
T Consensus 88 ~~~~~~------------g~~~~~~~~~-------------------------~~~ll~~~~~l~~ig~g~~~~~~~~li 130 (489)
T PRK10207 88 AIVLAI------------GYFMTGMSLL-------------------------KPDLIFIALGTIAVGNGLFKANPASLL 130 (489)
T ss_pred HHHHHH------------HHHHHHHhcc-------------------------chhHHHHHHHHHHhccccccCCHHHHH
Confidence 999999 8888777542 223466899999999999999999999
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeee--CCCC
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLV--EPEG 248 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~ 248 (587)
+|++|+++ ++|.+.++++|+..|+|.++||.+++++.++.|||++|+++.+.++++++.+...++.+++. +|++
T Consensus 131 ~~~~p~~~----~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (489)
T PRK10207 131 SKCYPPKD----PRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDH 206 (489)
T ss_pred HHhcCCCc----hhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCc
Confidence 99998754 34788999999999999999999999999999999999998776666666666665554332 2222
Q ss_pred ChhhhHHHHHHH-------HHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHH-HH------HhhhccCCCC
Q 007862 249 SIFSGIGQVLVA-------AYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFL-NK------AAMIVDNNEL 314 (587)
Q Consensus 249 ~~~~~~~~~~~~-------a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~------~~~~~~~~~~ 314 (587)
++. +....+.. ...-.. ..+ . .+..... .. .....++
T Consensus 207 ~~~-d~~~~~l~~~~~~~~~~~~~~--~~~----~-------------------~~~~~~~~~~~~~i~~~~f~~~~--- 257 (489)
T PRK10207 207 KPM-SFSKLLLVLLGSVVMIFVCAW--LMH----N-------------------VEVANLVLIVLSIVVTIIFFREA--- 257 (489)
T ss_pred cch-hhhhHHHHHHHHHHHHHHHHH--HHh----h-------------------hhHHHHHHHHHHHHHHHHHHHHH---
Confidence 221 11110000 000000 000 0 0000000 00 0000000
Q ss_pred CCCCCCCCccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeec-cccccCCCccccCcccccccchhhhh
Q 007862 315 KPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAM-KMNRHLGPKFQIPPGTVGVISMITIG 393 (587)
Q Consensus 315 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~i~~~ 393 (587)
.+.+ ..++++.+..+.++.....+|..+.|..+....+.. ..+.... ++.++++.++++|++.++
T Consensus 258 ------------~~~~-~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~ii 323 (489)
T PRK10207 258 ------------FKLD-KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVV 323 (489)
T ss_pred ------------hcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHH
Confidence 0001 123445555666677788899999888665433333 3455444 677888999999999999
Q ss_pred hhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHH
Q 007862 394 LWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEA 473 (587)
Q Consensus 394 l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~ 473 (587)
+..|+.+++ .+|+++|+..++...++..|+++.+++++.+....... ... ....+.+|+++.+++.++||.
T Consensus 324 i~~pl~~~l----~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~---~~~--~~~~s~~~~i~~~~l~g~Ge~ 394 (489)
T PRK10207 324 VASPILAGI----YTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWF---ADA--QGLTSPWFIVLVYLFQSLGEL 394 (489)
T ss_pred HHHHHHHHH----HHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhh---cCC--CCccCHHHHHHHHHHHHHHHH
Confidence 999987665 88887776667888999999999998887654322110 011 124678899999999999999
Q ss_pred HHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHH
Q 007862 474 FNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLN 553 (587)
Q Consensus 474 ~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~ 553 (587)
+..|+.++++++.+|++++|.++|++++.+++|+.++..+........ ...++. . ....+..+|..+++.+++.
T Consensus 395 ~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~--~~~~~~---~-~~~~~~~~f~~~~~~~~~~ 468 (489)
T PRK10207 395 FISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPD--NITDPL---E-TLPVYTNVFGKIGLVTLGV 468 (489)
T ss_pred HHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccccch---h-hhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988876553110 000110 0 0123567788888888877
Q ss_pred HHHHHHHHhhhcc
Q 007862 554 IVYFLYCARRYRY 566 (587)
Q Consensus 554 ~v~~~~~~~~~~~ 566 (587)
.++++++.|+.++
T Consensus 469 ~v~~~~~~~~~~~ 481 (489)
T PRK10207 469 AVVMALMVPWLNR 481 (489)
T ss_pred HHHHHHHHHHHHH
Confidence 7777776665543
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=1.4e-37 Score=342.03 Aligned_cols=453 Identities=15% Similarity=0.184 Sum_probs=334.5
Q ss_pred cccCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHh--hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhh
Q 007862 9 DQKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKE--YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKT 86 (587)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~ 86 (587)
|+++.++||.++.+...+++||+++|++.++++.|++++ +|+|..+++++.+.+.++..++++++|+++||++||||+
T Consensus 2 ~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 2 EKTFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT 81 (475)
T ss_pred CCcccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH
Confidence 345568999999999999999999999999999999988 999999999999999999999999999999994599999
Q ss_pred hhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccc
Q 007862 87 ITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCS 166 (587)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 166 (587)
+.++.+++.+ +.++++++. +...++.+|.+.|+|.|+..|+.
T Consensus 82 l~~~~~~~~~------------g~~~~~~~~--------------------------~~~~~~~~~~l~g~g~g~~~~~~ 123 (475)
T TIGR00924 82 MVLGGIVLML------------GHFMLAMSI--------------------------YPDLIFYGLGTIAVGSGLFKANP 123 (475)
T ss_pred HHHHHHHHHH------------HHHHHHhcc--------------------------cHhHHHHHHHHHHhccccccCCH
Confidence 9999999999 887777654 45678889999999999999999
Q ss_pred cccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCC
Q 007862 167 IPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEP 246 (587)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~ 246 (587)
.++++|++|++++ ++|+++++++|+..|+|.++||.+++++.++.||++.|.++++.++++++.++..++.+++.++
T Consensus 124 ~~~~a~~~~~~~~---~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~ 200 (475)
T TIGR00924 124 SSMVGKLYERGDM---PRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGS 200 (475)
T ss_pred HHHHHHhcCCCCc---ccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCC
Confidence 9999999986432 3488899999999999999999999999999999999999887777776666665555433222
Q ss_pred CCChhhhHH----H-------HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHH----HHhhhccC
Q 007862 247 EGSIFSGIG----Q-------VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLN----KAAMIVDN 311 (587)
Q Consensus 247 ~~~~~~~~~----~-------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~ 311 (587)
++++..... . .+....+.... ..+ ....+... -+......
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------------~~~~~~~~~~~~~~~~~~~~ 255 (475)
T TIGR00924 201 VPDPLSGQGKTYGKLLLALLAALALVFFCAWL-MHH------------------------VVIANILLMTVTLAVIIFFF 255 (475)
T ss_pred CCCCcchhhhhhHHHHHHHHHHHHHHHHHHHH-Hhc------------------------cHHHHHHHHHHHHHHHHHHH
Confidence 222111000 0 00000000000 000 00000000 00000000
Q ss_pred CCCCCCCCCCCccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccce-eeeeeccccccCCCccccCcccccccchh
Q 007862 312 NELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTF-TVSQAMKMNRHLGPKFQIPPGTVGVISMI 390 (587)
Q Consensus 312 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~i~~i 390 (587)
+.. ..| +.++ .++++....+++++....+|..+.|..+. ..++...++...+ ++++|++.++++|.+
T Consensus 256 ~~~------~~~----~~~~-~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~ 323 (475)
T TIGR00924 256 RLA------FKP----RLDA-VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPF 323 (475)
T ss_pred HHH------Hhc----cCCH-HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHH
Confidence 000 000 0011 22344445677888889999999998884 4455555666665 788999999999999
Q ss_pred hhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHH
Q 007862 391 TIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGF 470 (587)
Q Consensus 391 ~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ 470 (587)
.++++.|+.+++ ..++.+|+.+++...++..|+++.++++..+++.... .+. ....+++|+++++++.++
T Consensus 324 ~iil~~p~~~~~----~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~----~~~--~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 324 WVVVGSPVLAMI----WTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWF----ADA--GGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHHHHHHHH----HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh----cCC--CCccCHHHHHHHHHHHHH
Confidence 999999997765 5555555444577778999999999999887765221 111 124799999999999999
Q ss_pred HHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHH
Q 007862 471 CEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLG 550 (587)
Q Consensus 471 ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~ 550 (587)
||.+..|..+++.++.+|++.||+++|++.+...+|+.+++.+........ +....|..+++++
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~----------------~~~~~~~~~~~~~ 457 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ----------------GVTGVFGKIGLVT 457 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------------chhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999998887654321 2345667777777
Q ss_pred HHHHHHHHHHHhhhc
Q 007862 551 GLNIVYFLYCARRYR 565 (587)
Q Consensus 551 ~l~~v~~~~~~~~~~ 565 (587)
++..+++++..|+.+
T Consensus 458 ~~~~~~~~~~~~~~~ 472 (475)
T TIGR00924 458 LLVGVVMALMVPWLN 472 (475)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777666666665543
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=2.3e-35 Score=322.70 Aligned_cols=455 Identities=15% Similarity=0.202 Sum_probs=325.4
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHH
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 90 (587)
|+.+|||.++.+...+++||+++|++...++.|+++++|+++.+++.+.+.+.....++++++|+++||++||||++.++
T Consensus 3 ~~~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG 82 (493)
T PRK15462 3 KHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLG 82 (493)
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHH
Confidence 44569999999999999999999999999999999999999999999999999999999999999999944999999999
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
.++..+ |.++++.... +...++.+..+..+|.|...|+..+++
T Consensus 83 ~il~~l------------g~lll~~~~~-------------------------~~~~~~l~l~li~iG~G~~~~~~~alv 125 (493)
T PRK15462 83 ALLMAI------------GHVVLGASEI-------------------------HPSFLYLSLAIIVCGYGLFKSNVSCLL 125 (493)
T ss_pred HHHHHH------------HHHHHHHhhc-------------------------chhHHHHHHHHHHHhcccccccHHHHH
Confidence 999998 7654433210 123355666677789999999999999
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCC-CCC
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEP-EGS 249 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 249 (587)
+|++|+++ ++|.++++++|+..|+|+.++|.+.+++.+++||++.|.++++.++++++.++..++.+.+... .+.
T Consensus 126 ~elfp~~~----~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~ 201 (493)
T PRK15462 126 GELYEPTD----PRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKK 201 (493)
T ss_pred HHHCCCCC----ccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCC
Confidence 99998754 3589999999999999999999999999999999999999888888887777776655433211 111
Q ss_pred hhhh--HHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHH------Hh-hhccCCCCCCCCCC
Q 007862 250 IFSG--IGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNK------AA-MIVDNNELKPDGTP 320 (587)
Q Consensus 250 ~~~~--~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~-~~~~~~~~~~~~~~ 320 (587)
+... ..........---...+. +. . ... ..+....+.. .. +...
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~-----~---~~~-~~~~~~~~~~~~~~~~~~~~~~~---------- 254 (493)
T PRK15462 202 VLRATNFLLPNWGWLLVLLVATPA--------LI-----T---VLF-WKEWSVYALIVATIIGLGVLAKI---------- 254 (493)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHH--------HH-----H---HHH-HHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 1110 000000000000000000 00 0 000 0000000000 00 0000
Q ss_pred CCccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccce-eeeeeccccccCCCccccCcccccccchhhhhhhhhch
Q 007862 321 VNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTF-TVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFY 399 (587)
Q Consensus 321 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~ 399 (587)
. ......+|+|++...++++...+.||..+.|.++. ..+...++|++.. ++++|+++++++|++.++++.|+.
T Consensus 255 ----~-~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~ 328 (493)
T PRK15462 255 ----Y-RKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFL 328 (493)
T ss_pred ----H-HhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHH
Confidence 0 00012356888888888999999999999999884 4555577888877 899999999999999999999997
Q ss_pred hhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhh
Q 007862 400 DTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQ 479 (587)
Q Consensus 400 ~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~ 479 (587)
.++ ..|..+|++.++...++..|+++.+++++++....... +.+ ...+.+|++..++++++||.+..|..
T Consensus 329 a~l----w~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~----~~~--~~~s~~wl~~~~~~~t~gEl~~sPvg 398 (493)
T PRK15462 329 AWV----VKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWS----AMY--GHSSLPLMVLGLAVMGFAELFIDPVA 398 (493)
T ss_pred HHH----HHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhc----CCC--CCcCHHHHHHHHHHHHHHHHHHChHH
Confidence 776 56654444346888899999999999998876654321 111 24789999999999999999999999
Q ss_pred HHHHHhhCCchhhHHHHHHHHHHH-HHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHH
Q 007862 480 IEFFNKQFPDHMKSIANSLLFCSF-GFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLN 553 (587)
Q Consensus 480 ~~~~~~~~P~~~rg~~~gl~~~~~-~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~ 553 (587)
.+.+.+.+|++.||+++|.+++.. .+|+.+++.+.......+.....+ ..+ ....+..+|..++.+.++.
T Consensus 399 ls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~-~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 399 MSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGA---INY-SINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcccc---ccc-hhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999998854 788888877766553211000000 000 1124566777777666655
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=6.9e-35 Score=322.71 Aligned_cols=459 Identities=15% Similarity=0.199 Sum_probs=326.6
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
.+++|.++.++..+++||+++|++..+++.|+++++|++.++++++.+.+.......++++|+++||++|||++++++.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 47888999999999999999999999999999999999999999999998888888888999999994499999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +.++++++.. +...++++|.++++|.|...|+..++++|
T Consensus 97 ~~~i------------g~~l~~~~~~-------------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~ 139 (500)
T PRK09584 97 VLAI------------GYALVAWSGH-------------------------DAGIVYMGMATIAVGNGLFKANPSSLLST 139 (500)
T ss_pred HHHH------------HHHHHHHhcc-------------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHH
Confidence 9999 8776666431 34567788999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeee--CCCCCh
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLV--EPEGSI 250 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 250 (587)
++|+++ ++|.++++++|+..|+|+.++|.+++++.+++|||+.|++.++.++++++.+++.++.+++. ++++++
T Consensus 140 ~f~~~~----~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~ 215 (500)
T PRK09584 140 CYEKDD----PRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEP 215 (500)
T ss_pred hcCCCc----hhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccc
Confidence 998643 34667899999999999999999999999999999999998887777766655555443332 122211
Q ss_pred hhh--H----HHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCcc
Q 007862 251 FSG--I----GQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQW 324 (587)
Q Consensus 251 ~~~--~----~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w 324 (587)
... . ............. ... + + .....-.......... .+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-~~~----~----------~-------~~~~~~~~~~~~~~~~------------~~ 261 (500)
T PRK09584 216 INYRKLLLTIVGVVALIAIATWL-LHN----Q----------E-------IARMALGVVALGIVVI------------FG 261 (500)
T ss_pred cchhhHHHHHHHHHHHHHHHHHH-Hhc----c----------h-------HHHHHHHHHHHHHHHH------------HH
Confidence 110 0 0000000000000 000 0 0 0000000000000000 00
Q ss_pred ccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeec-cccccCCCccccCcccccccchhhhhhhhhchhhhh
Q 007862 325 RLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAM-KMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVL 403 (587)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~ 403 (587)
+........++++.+..+.++...+.||+.+.|.++.+..+.. ..+.... ++.+++++++++|.+.++++.|+.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~- 339 (500)
T PRK09584 262 KEAFAMKGAARRKMIVAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAI- 339 (500)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHH-
Confidence 0000011234555556677778889999999999987655432 3444444 677889999999999999999998776
Q ss_pred HHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHH
Q 007862 404 VPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFF 483 (587)
Q Consensus 404 ~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~ 483 (587)
.+|+++|. +..+++..|+++.+++++........ +++ ...++.+|++++++++++||++..|...+++
T Consensus 340 ---~~~l~~r~---~~~~~~~~G~~l~~l~f~~l~~~~~~----~~~--~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~ 407 (500)
T PRK09584 340 ---YNKMGDRL---PMPHKFAIGMVLCSGAFLVLPLGAKF----AND--AGIVSVNWLIASYGLQSIGELMISGLGLAMV 407 (500)
T ss_pred ---HHHhCcCC---CcHHHHHHHHHHHHHHHHHHHHHHHh----cCC--CCccCHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 66665553 67789999999999999887765431 111 1246788999999999999999999999999
Q ss_pred HhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007862 484 NKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 563 (587)
Q Consensus 484 ~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~ 563 (587)
.+.+|+++||+++|++.+...+|+.+++.+........ ...++. ...+++..+|...++++++..++.+...++
T Consensus 408 ~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~--~~~~~~----~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~ 481 (500)
T PRK09584 408 AQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPD--NVTDPL----MSLEVYGRVFLQIGIATAVIAVLMLLTAPK 481 (500)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887765332100 000010 011236677888887777666666666665
Q ss_pred hcc
Q 007862 564 YRY 566 (587)
Q Consensus 564 ~~~ 566 (587)
.++
T Consensus 482 ~~k 484 (500)
T PRK09584 482 LNR 484 (500)
T ss_pred HHH
Confidence 544
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.97 E-value=2.4e-29 Score=283.94 Aligned_cols=332 Identities=27% Similarity=0.523 Sum_probs=269.8
Q ss_pred HHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccce
Q 007862 31 LATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGM 110 (587)
Q Consensus 31 ~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~ 110 (587)
++||++..++..|+++.+|++++++..+.+.+.....+.++++|+++|+++||+|++.++.+++.+ |.
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~l------------G~ 68 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVV------------GH 68 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH------------HH
Confidence 478999999999999999999999999999999999999999999999999999999999999999 88
Q ss_pred EEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhh
Q 007862 111 LTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFN 190 (587)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 190 (587)
+++++++..+.. ...+....+.+..+.++|+|+++|+..++.+|++++++ +++|.++|+
T Consensus 69 ~llai~a~~~~~------------------~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~ 127 (654)
T TIGR00926 69 ALLSFGAIPSSG------------------HPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFS 127 (654)
T ss_pred HHHHhccCcccc------------------cchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHH
Confidence 777765421100 01134557889999999999999999999999998643 356999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcccc-------cchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHHHHHHHH
Q 007862 191 WYYTTFTVVILITQTVLVYIQDS-------VSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYK 263 (587)
Q Consensus 191 ~~~~~~~~g~~i~~~~~~~i~~~-------~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 263 (587)
|+|+++|+|+++++++.+++.+. .+|..+|.++++.++++++++...+++++..+|.+++...+.+++..+.+
T Consensus 128 ~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~ 207 (654)
T TIGR00926 128 FFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALR 207 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999844 36999999999999999999998888887777777766667777777666
Q ss_pred hccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhhhhH
Q 007862 264 KRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIP 343 (587)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 343 (587)
+++..... + ....|+|++.... ..+.++++|+++++++
T Consensus 208 ~~~~~~~~---~---------------------~~~~~ld~a~~~~------------------~~~~V~evkrll~il~ 245 (654)
T TIGR00926 208 KRFSTRSE---H---------------------WPLHWLDYAKDKH------------------DIRMIRSTKRLLRVLV 245 (654)
T ss_pred HhhccCCc---c---------------------cchhHHHHhcccc------------------ccchHHHHHHHHHHHH
Confidence 54322111 0 0123444432211 1234677899999999
Q ss_pred HHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHH
Q 007862 344 IWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRI 423 (587)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i 423 (587)
++.....+|..+.|+.+.+..|...++...+ ++.+|+.+++.+|.+.++++.|++++.+.|..+|.+ ...++..++
T Consensus 246 l~i~~~ifw~~~~Q~~s~~~~qa~~m~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~---~~ls~l~k~ 321 (654)
T TIGR00926 246 LFIPLPMFWALFDQQGSRWTLQATRMDGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCG---TRFTSLRKM 321 (654)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHhcCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcC---CCCChHHHH
Confidence 9999999999999999988888877777665 678899999999999999999999877777766543 235889999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007862 424 GIGMIFSILSMIVAGLVE 441 (587)
Q Consensus 424 ~~G~i~~~~s~~~~~~~~ 441 (587)
.+|+++.+++++++...+
T Consensus 322 ~iG~~la~la~~va~~ve 339 (654)
T TIGR00926 322 AVGGLLAALSFFVAALVQ 339 (654)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998887744
No 8
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.92 E-value=4.4e-23 Score=221.01 Aligned_cols=380 Identities=14% Similarity=0.040 Sum_probs=248.2
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHH
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 90 (587)
+..+.+|.+..+....++..++.....+.++.|+.+++|.|..+.+++.+++.++..+++++.|+++|| +||||++.++
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~ 87 (399)
T PRK05122 9 SGLRLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADT-LGPKKAVVFG 87 (399)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhc-cCCcchHHHH
Confidence 455666777778888888888888888899999999999999999999999999999999999999999 5999999999
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
.+++.+ +.+.+.++.... .....+...+++.|+++|+|.+...++....+
T Consensus 88 ~~~~~~------------~~~~~~~~~~~~------------------~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~ 137 (399)
T PRK05122 88 LCGCAL------------SGLLYLLAGLLA------------------AWPVLSLLLLLLGRLLLGIGESLAGTGSILWG 137 (399)
T ss_pred HHHHHH------------HHHHHHHhhhhh------------------ccchhHHHHHHHHHHHHHhhHHhhcchHHHHH
Confidence 988776 544333322100 00011466789999999999999999999999
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCCh
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSI 250 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (587)
.|.+|+++ |+++++++....++|..+++.+++++.+..||++.|++..+..++.+... ++ .++.++++++
T Consensus 138 ~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~ 207 (399)
T PRK05122 138 IGRVGALH------TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RP-RPAVPPVKGE 207 (399)
T ss_pred HhhcChhh------hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hc-CCCCCCCCcc
Confidence 99998755 99999999999999999999999999999999999887665544332221 11 0000000000
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccce
Q 007862 251 FSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQ 330 (587)
Q Consensus 251 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 330 (587)
+ .++.
T Consensus 208 --------------------~---------------------------~~~~---------------------------- 212 (399)
T PRK05122 208 --------------------R---------------------------LPFR---------------------------- 212 (399)
T ss_pred --------------------c---------------------------hhHH----------------------------
Confidence 0 0000
Q ss_pred eeehhhhhhhhhH-HHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhh
Q 007862 331 QVEEVKCLIKIIP-IWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRK 409 (587)
Q Consensus 331 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r 409 (587)
+..|..+.... .......+.........+.. +.... ..+.......++.++..++.+++ .||
T Consensus 213 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l----~~r 275 (399)
T PRK05122 213 --RVLGRVWPYGMGLALASIGFGTIATFITLYYA------ARGWD-----GAALALTLFGVAFVGARLLFGNL----INR 275 (399)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------Hcccc-----cchHHHHHHHHHHHHHHHHHHHH----HHH
Confidence 00011111000 01111111111111111110 00000 01112222333334444443333 555
Q ss_pred hhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCc
Q 007862 410 ITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD 489 (587)
Q Consensus 410 ~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~ 489 (587)
++ +++.+..+.++.+++.+..... .+.+.+++..++.+++.+...+.......+.+|+
T Consensus 276 ~~-------~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 333 (399)
T PRK05122 276 LG-------GLRVAIVSLLVEILGLLLLWLA---------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPP 333 (399)
T ss_pred hc-------cHHHHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH
Confidence 43 3345556666666665554432 2444556667888999998888888888899999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007862 490 HMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 561 (587)
Q Consensus 490 ~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~ 561 (587)
+.||+++|+++....+|..+++.+.+.+.+.. ++...|...+++.+++.+..++..
T Consensus 334 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 334 QNRGAALGAYSVFLDLSLGITGPLAGLVASWF----------------GYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999888888776422 356677777777777766655443
No 9
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=1.8e-23 Score=225.69 Aligned_cols=399 Identities=12% Similarity=-0.016 Sum_probs=246.5
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|....++...++..++.......++.+ .++++.+..+.+++.+...++..++.++.|+++|| +||||++.++.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr-~g~~~~l~~~~~~~~~ 94 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQ-IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADR-YDRKKLILLARGTCGL 94 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhh-cCCceEEEehHHHHHH
Confidence 344455555666666665555555555 56788899999999999999999999999999999 5999999998877766
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.+++....... ..+++.+++.|++.|++.+...++..+.+.|.+|+
T Consensus 95 ------------~~~~~~~~~~~~---------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 141 (417)
T PRK10489 95 ------------GFIGLALNAFLP---------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGR 141 (417)
T ss_pred ------------HHHHHHHHHHcC---------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCH
Confidence 554433211000 01567788899999999998889999999999987
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQ 256 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (587)
++ |+++.++.+...++|..+||.+++++.+..+|++.|.+..+..++++++.+..+ +. ++++...
T Consensus 142 ~~------~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~---~~~~~~~----- 206 (417)
T PRK10489 142 EN------LMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLP-AL---PPPPQPR----- 206 (417)
T ss_pred HH------HHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC-CC---CCCCccc-----
Confidence 54 899999999999999999999999999888999999887776665554433221 11 1100000
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhh
Q 007862 257 VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVK 336 (587)
Q Consensus 257 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 336 (587)
+ ++ ..+..+.... ....+
T Consensus 207 --------------~---~~---------------------~~~~~~~~~~------------------------~~~~~ 224 (417)
T PRK10489 207 --------------E---HP---------------------LRSLLAGFRF------------------------LLASP 224 (417)
T ss_pred --------------c---cc---------------------hHHHHHHHHH------------------------HHcCh
Confidence 0 00 0000000000 00001
Q ss_pred hhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccc-cCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCC
Q 007862 337 CLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEG 415 (587)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~ 415 (587)
.+...+................+. ......+ .+ ...+.+.....++.++...+.+++ .+| .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~p~-------~~~~~~g--~~~~~~g~~~~~~~~g~~ig~~~~~~l----~~~----~- 286 (417)
T PRK10489 225 VVGGIALLGGLLTMASAVRVLYPA-------LADEVWQ--MGAAQIGLLYAAVPLGAALGALTSGWL----AHS----A- 286 (417)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhHH-------HHHhccC--CChhHhHHHHHHHHHHHHHHHHHHHHh----hhc----c-
Confidence 111111110110001111111111 1111111 00 012233333444444444443332 332 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHH
Q 007862 416 GITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIA 495 (587)
Q Consensus 416 ~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~ 495 (587)
++.+.+..+.++.+++++.+... .+.+......++.+++.+...+...++..+..|++.||++
T Consensus 287 --~~~~~l~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~ 349 (417)
T PRK10489 287 --RPGLLMLLSTLGSFLAVGLFGLM---------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRI 349 (417)
T ss_pred --CcchHHHHHHHHHHHHHHHHHcc---------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 22344556666666665554422 2334455566777888888788888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccccCcccccc
Q 007862 496 NSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGIQSLED 575 (587)
Q Consensus 496 ~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~ 575 (587)
+|+++..+.+|..+++.+.+.+.+.. +....+...+++.++..++.....+++|++++|+.+++
T Consensus 350 ~g~~~~~~~~g~~~g~~l~G~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 350 NGLWTAQNVTGDAIGAALLGGLGAMM----------------TPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHHhhhHhHHHHHHHHHHHHh----------------chhhHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 99999999999999999999887532 23345666666666666666666677777777776666
Q ss_pred ccc
Q 007862 576 QND 578 (587)
Q Consensus 576 ~~~ 578 (587)
..|
T Consensus 414 ~~~ 416 (417)
T PRK10489 414 ASD 416 (417)
T ss_pred CCC
Confidence 443
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.92 E-value=2.4e-23 Score=222.78 Aligned_cols=375 Identities=12% Similarity=0.057 Sum_probs=241.6
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
.++|...+.+....++.....+. ...+.+.+.+++|.|+++.+++.+.+.++..+++++.|+++|| +||||++.++.+
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~ 82 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFV-PVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSN-VERRKLLIGLFV 82 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHH-HHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHH
Confidence 34565555555555554444443 3333456788999999999999999999999999999999999 599999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +.+.++++. +++.++++|+++|++.+...|...+++.|
T Consensus 83 ~~~~------------~~~~~~~~~--------------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~ 124 (390)
T PRK03545 83 LFIA------------SHVLSALAW--------------------------NFTVLLISRIGIAFAHAIFWSITASLAIR 124 (390)
T ss_pred HHHH------------HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 877766655 77889999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhh
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFS 252 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (587)
++|+++ |+++++++....++|..++|.+++.+.+..|||+.|++.+++.++..++.+...|+.++ +++++.+
T Consensus 125 ~~~~~~------r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~ 196 (390)
T PRK03545 125 VAPAGK------KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS--EHSGSLK 196 (390)
T ss_pred hCChhh------hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCcchHH
Confidence 999755 99999999999999999999999999998999999999887766554443332221100 0000000
Q ss_pred hHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceee
Q 007862 253 GIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQV 332 (587)
Q Consensus 253 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 332 (587)
+.....
T Consensus 197 --------------------------------------------------~~~~~~------------------------ 202 (390)
T PRK03545 197 --------------------------------------------------SLPLLF------------------------ 202 (390)
T ss_pred --------------------------------------------------HHHHHH------------------------
Confidence 000000
Q ss_pred ehhhhhhhhh-HHHHHHHHHHhhhccccceeeeeeccccccCCCcccc-CcccccccchhhhhhhhhchhhhhHHHhhhh
Q 007862 333 EEVKCLIKII-PIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQI-PPGTVGVISMITIGLWLPFYDTVLVPALRKI 410 (587)
Q Consensus 333 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~ 410 (587)
. .+.++... ..+......+........+.. ...+ .+. ..+.......+..++...+.+++ .||.
T Consensus 203 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~g--~s~~~~~~~~~~~~~~~~~g~~~~g~l----~dr~ 268 (390)
T PRK03545 203 R-RPALVSLYLLTVVVVTAHFTAYSYIEPFVQ-------QVAG--LSENFATLLLLLFGGAGIIGSVLFSRL----GNRH 268 (390)
T ss_pred h-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhcC--CCccHHHHHHHHHHHHHHHHHHHHHHH----hhcc
Confidence 0 01111111 111111111111111111111 1111 000 01222222333444444433332 4443
Q ss_pred hcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCch
Q 007862 411 TKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDH 490 (587)
Q Consensus 411 ~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~ 490 (587)
+ + +.+..+..+..++....... ..+.+.++...++.+++.....+.......+..|+
T Consensus 269 ~-------~-~~~~~~~~~~~~~~~~l~~~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~- 325 (390)
T PRK03545 269 P-------S-GFLLIAIALLLVCLLLLLPA--------------ANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD- 325 (390)
T ss_pred c-------h-hHHHHHHHHHHHHHHHHHHH--------------hchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-
Confidence 2 1 23444554444444333221 12445556667788888888888888888888875
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007862 491 MKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCAR 562 (587)
Q Consensus 491 ~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~ 562 (587)
.|++++|+.+....+|..+|+.+.+.+.+.. ++...|...+.+.+++.+.++...+
T Consensus 326 ~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 326 ATDVAMALFSGIFNIGIGAGALLGNQVSLHL----------------GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 7899999999999999999999999887532 4556778888888888777766654
No 11
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.91 E-value=5.7e-25 Score=234.64 Aligned_cols=367 Identities=35% Similarity=0.575 Sum_probs=242.2
Q ss_pred hhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccc
Q 007862 84 FKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIR 163 (587)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~ 163 (587)
.|++.++.+++++ |.+++.+++..+. .+++.+.+.+++++.++++|+|+.+
T Consensus 1 yktI~~g~~~~~~------------G~~ll~l~~~~~~-----------------~~~~~~~~~~~~gL~lia~G~G~~K 51 (372)
T PF00854_consen 1 YKTILLGSIVYLL------------GHVLLTLSAIPPS-----------------LPSGIQLGLFYIGLALIAVGTGGIK 51 (372)
T ss_dssp HHHHHHHHHHHHH------------HHHH--HHHTSSS-----------------C------CHHHHHHHHHHHHHHCCH
T ss_pred CHhhhHHHHHHHH------------HHHHhHHHHhcch-----------------hhhhHHHHHHHHHHHHHHhcccccc
Confidence 4899999999999 9999888774222 1233466789999999999999999
Q ss_pred ccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeee
Q 007862 164 PCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVL 243 (587)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 243 (587)
|+..++++||+++++ +++|.++|+|+|++.|+|+.+++.+.+++++++||.+.|+++.+.++++++.++..+++|..
T Consensus 52 ~ni~~~~~dq~~~~~---~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~ 128 (372)
T PF00854_consen 52 PNISPFGADQYDEDD---DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRK 128 (372)
T ss_dssp HHHHHHHHHCSSTTT---TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--
T ss_pred ccHHHHHHHHhcccc---hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcC
Confidence 999999999999763 36799999999999999999999999999999999999999999999999999999998877
Q ss_pred e-CCCCChhhh-HHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCC
Q 007862 244 V-EPEGSIFSG-IGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPV 321 (587)
Q Consensus 244 ~-~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (587)
. ++.+++... ...+...+.+++....+. +....... .... ......+.........+... ..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~---------~~ 192 (372)
T PF00854_consen 129 VAPPGGSPLTNFIKLVLVAAFKKRKLAVPK---GSSWLDWA---LFQY-SERSIFGIIVFIRAAVIFFP---------EI 192 (372)
T ss_dssp S-----S--S--SHHHHHHHHHHHCCCH-H---HHHHHHHH---HHHH-CCCCCCCCCCHHHHHHHHCC---------CH
T ss_pred cCccCCcccchhHHHHHHHHHHHhhccccc---chHHHHHh---hhhh-hhhhhhhhhhhccchhhhhh---------hh
Confidence 7 566666666 444444555555443322 11000000 0000 00000000001110110000 00
Q ss_pred Ccccc-ccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchh
Q 007862 322 NQWRL-CSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYD 400 (587)
Q Consensus 322 ~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~ 400 (587)
..|.. ++.+++++.+.+.+.++.+.+.+.+.....+...+...+...+++...+.+++|+..++.+|.+.++++.|+.|
T Consensus 193 ~~~~~~~~~~~~~~~k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~ 272 (372)
T PF00854_consen 193 FFWALFCQVQRVEELKALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILD 272 (372)
T ss_dssp HHHTTTSSTTTHHHCCHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHH
T ss_pred hhcccCCccceeeeeeeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHH
Confidence 11221 33455666777778888777778888888887777777777776666623889999999999999999999999
Q ss_pred hhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhH
Q 007862 401 TVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQI 480 (587)
Q Consensus 401 ~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~ 480 (587)
++.+|+.++ +...+...++..|+++..+++++....+..+.+.....+ ..+.+|.++.+++.+++|.+..+...
T Consensus 273 ~~~~p~~~~----~~~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~e~~l~~~g~ 346 (372)
T PF00854_consen 273 RVVYPLLRR----GIQPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG--KVSPWWQVPMYIFWLIPEYFLSGTGE 346 (372)
T ss_dssp HHCCCTTTT----------HHHHHHH-HHHHHHHHTTTHHHH---HH----T--T--THHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHhHHhhh----cccchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC--CCChhhHHHHHHHHHHHHHHhhHHHH
Confidence 999988872 223588899999999999999988877765544444332 34558888999999999999999999
Q ss_pred HHHHhhCCchhhHHHHHHHHHHHH
Q 007862 481 EFFNKQFPDHMKSIANSLLFCSFG 504 (587)
Q Consensus 481 ~~~~~~~P~~~rg~~~gl~~~~~~ 504 (587)
+..+|.+|++..+.++|+++....
T Consensus 347 ~~~~~~a~~~~p~~m~~~~~~~~~ 370 (372)
T PF00854_consen 347 SAAYEFAPSRAPSSMMGIWFALSA 370 (372)
T ss_dssp HHHHHHTTTT-SSSSTHHHHHHH-
T ss_pred HHHHHhhHHhhhHHHHHHHHHHhc
Confidence 988888888888888888776554
No 12
>PRK12382 putative transporter; Provisional
Probab=99.91 E-value=1.1e-22 Score=217.46 Aligned_cols=373 Identities=11% Similarity=0.042 Sum_probs=238.6
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+.++.+....++..++.....+.++.|+.+++|.|..+.+++.+++.+...++++++|+++|| +||||+++++.++..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr-~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQ-YGAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHh-hcchHHHHHHHHHHHH
Confidence 445556666667777777777888889999999999999999999999999999999999999 5999999999887766
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.+...+....+. ....+...++++|+++|+|.+...+...+++.|.+|+
T Consensus 94 ------------~~~~~~~~~~~~~------------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 143 (392)
T PRK12382 94 ------------AGLAYLLAAILPV------------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGP 143 (392)
T ss_pred ------------HHHHHHhhhcccc------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 4432211110000 0012678899999999999999999999999999987
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQ 256 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (587)
++ |+++++++....++|..++|.+++++.+.+||++.+.+..+..++.+. ..+ +.++.+++++
T Consensus 144 ~~------r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~------- 206 (392)
T PRK12382 144 KH------SGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA---FNG-TVRKVPAHAG------- 206 (392)
T ss_pred cc------cchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH---HHH-hccCCCCCcc-------
Confidence 54 999999999999999999999999998889999887765544332221 111 1100000000
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhh
Q 007862 257 VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVK 336 (587)
Q Consensus 257 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 336 (587)
+ .+ +..+ ..|
T Consensus 207 --------------~---~~-----------------------~~~~------------------------------~~~ 216 (392)
T PRK12382 207 --------------E---RP-----------------------SLWS------------------------------VVG 216 (392)
T ss_pred --------------c---Cc-----------------------hHHH------------------------------HHH
Confidence 0 00 0000 000
Q ss_pred hhhhh-hHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCC
Q 007862 337 CLIKI-IPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEG 415 (587)
Q Consensus 337 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~ 415 (587)
.++.. .........+.......+.+.. +.... ..+.......++.++..++.+++ .||+++|
T Consensus 217 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l----~~r~g~~-- 279 (392)
T PRK12382 217 LIWKPGLGLALQGVGFAVIGTFVSLYFA------SKGWA-----MAGFTLTAFGGAFVLMRVLFGWM----PDRFGGV-- 279 (392)
T ss_pred HHHHhHHHHHHHHHHHhHHHHHHHHHHH------hcCCc-----hhHHHHHHHHHHHHHHHHHHHHH----HHhcCCC--
Confidence 00000 0001111111111111111110 01110 01111222333334444444443 6665433
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHH
Q 007862 416 GITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIA 495 (587)
Q Consensus 416 ~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~ 495 (587)
+.+..+..+.+++++..... .+.++..+..++.+++++...+.......+.+|++.||++
T Consensus 280 -----~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 339 (392)
T PRK12382 280 -----KVAIVSLLVETVGLLLLWLA---------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTA 339 (392)
T ss_pred -----eehHHHHHHHHHHHHHHHHc---------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHH
Confidence 33555556666665544432 2344555667788899988888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 007862 496 NSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYC 560 (587)
Q Consensus 496 ~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~ 560 (587)
.|+.+....+|..+++.+.+.+.+.. ++...|...+++.+++.+..+..
T Consensus 340 ~g~~~~~~~~g~~ig~~~~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 340 LGGYAAFQDIAYGVSGPLAGMLATSF----------------GYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh----------------CchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998887532 34567777777777777665544
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.91 E-value=2e-22 Score=216.26 Aligned_cols=174 Identities=14% Similarity=0.066 Sum_probs=145.8
Q ss_pred CCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHH
Q 007862 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 93 (587)
++|..+.......+++.+..+..-... +.+.+++|.|+.+.+++.++..++..+++++.|+++|| +||||++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAA-PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADR-IGRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHH
Confidence 556666666667777766666544444 46678999999999999999999999999999999999 5999999999988
Q ss_pred HHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 94 AILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 94 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
..+ +.+...++. ++..+++.|++.|++.+...|...+++.|.
T Consensus 90 ~~~------------~~~~~~~~~--------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~ 131 (406)
T PRK11551 90 FGL------------FSLATAQAW--------------------------DFPSLLVARLLTGVGLGGALPNLIALTSEA 131 (406)
T ss_pred HHH------------HHHHHHHhc--------------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 888 665555543 677889999999999999999999999999
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 174 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
+|+++ |++++++++...++|..+++.+++.+.+..+|++.|++.++..++.+++
T Consensus 132 ~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK11551 132 VGPRL------RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPL 185 (406)
T ss_pred cCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence 98755 9999999999999999999999999988899999999877655544433
No 14
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=1.8e-22 Score=221.23 Aligned_cols=176 Identities=13% Similarity=0.030 Sum_probs=147.9
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
.+..+.+....++..+..+.+...++.| .+++|.|..+.+++.+.+.++..++.+++|+++|| +||||+++++.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSM-AQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADR-VGVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHH
Confidence 3356666666777777777777766665 56799999999999999999999999999999999 599999999988888
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.+.++++. +...++++|+++|+|.|+..|....++.|.+|
T Consensus 87 ~------------~~~~~~~~~--------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~ 128 (471)
T PRK10504 87 L------------GSLFCALSG--------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVP 128 (471)
T ss_pred H------------HHHHHHHhC--------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcC
Confidence 8 776655543 66778999999999999999999999999998
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhc
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
+++ |++++++.....++|..++|.+++++.+..+||+.|.+..+...+..+.....
T Consensus 129 ~~~------~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 129 REQ------YMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred HHH------HHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 744 89999999999999999999999999999999999999877666555544433
No 15
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.91 E-value=9.4e-23 Score=219.61 Aligned_cols=168 Identities=12% Similarity=0.126 Sum_probs=150.8
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+.++...++.+++++.+.+.++.|+++++|+|..+.|.+.++..+...+..+++|+++|| +|||+++.++.++..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr-~g~k~~l~~~~~~~~~--- 88 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADR-FGAKPMIVTGMLMRAA--- 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHH-hCchHHHHHHHHHHHH---
Confidence 677788889999999999999999999999999999999999999999999999999999 5999999999999998
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+.+...++. +++.++..|.++|++.+...|...+++.|.+|+++
T Consensus 89 ---------~~~~~~~~~--------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~- 132 (400)
T PRK11646 89 ---------GFATMAIAH--------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ- 132 (400)
T ss_pred ---------HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-
Confidence 777665543 66778999999999999999999999999998754
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
|++++++.+...++|..+||.+++++. .++|++.|++.++..++..++
T Consensus 133 -----~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 133 -----RGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 689999999887766655444
No 16
>PRK10054 putative transporter; Provisional
Probab=99.90 E-value=1.1e-22 Score=218.71 Aligned_cols=174 Identities=12% Similarity=0.163 Sum_probs=150.9
Q ss_pred CccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHH
Q 007862 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAA 94 (587)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 94 (587)
.+|+.+.++...++...+++...++++.|+++++|+|..+.+++.+++.++..+.+++.|+++|| +|||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADK-FDKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcchhHHHHHHHH
Confidence 34457788888999999999999999999999999999999999999999999999999999999 69999999999888
Q ss_pred HHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC
Q 007862 95 ILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 174 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 174 (587)
.+ +.++..+++ +.+.+++.|.+.+.+.+...|+......|.+
T Consensus 84 ~~------------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 125 (395)
T PRK10054 84 AS------------GFIAIPLVN--------------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNL 125 (395)
T ss_pred HH------------HHHHHHHHh--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88 776665544 5666777888888888888888899999999
Q ss_pred CCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 175 DATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 175 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
|+++ |++++++.+...++|..++|.+++++.+ .+|+..|.+.+++.++.+++.
T Consensus 126 ~~~~------~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 126 SSTS------KTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred CHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 8744 9999999999999999999999999875 799999998877766665443
No 17
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.90 E-value=1.9e-22 Score=221.16 Aligned_cols=189 Identities=12% Similarity=0.047 Sum_probs=137.3
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhh--------CCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccch
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEY--------HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRF 84 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~--------~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~ 84 (587)
+.+.+..+...+..+...+... +.......+++++ |.+..+.+++.+++.++..++++++|+++|| +|||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr-~Grr 85 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTA-VISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNR-FGRR 85 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccc-eehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccH
Confidence 3344444444444444433333 2233334456655 8999999999999999999999999999999 5999
Q ss_pred hhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccc
Q 007862 85 KTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRP 164 (587)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 164 (587)
|+++++.+++.+ +.+..+++...-. ....++......++++|+++|++.|+..|
T Consensus 86 ~~~~~~~~l~~i------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~R~l~G~~~g~~~~ 139 (479)
T PRK10077 86 DSLKIAAVLFFI------------SALGSAWPEFGFT--------------SIGPDNTGYVPEFVIYRIIGGIGVGLASM 139 (479)
T ss_pred HHHHHHHHHHHH------------HHHHHHhhccccc--------------cccccchhHHHHHHHHHHHHhhhHhHHhh
Confidence 999999999888 6655443210000 00001122456789999999999999999
Q ss_pred cccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcc--------cccchhhHHHHHHHHHHHHHHHHH
Q 007862 165 CSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~--------~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
....+++|++|+++ |++++++......+|..+++.++..+. +..|||+.|++.++..++.++..+
T Consensus 140 ~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~ 212 (479)
T PRK10077 140 LSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLY 212 (479)
T ss_pred HHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999855 999999999999999999887765443 457999999988776666554433
No 18
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.90 E-value=2.8e-22 Score=221.89 Aligned_cols=397 Identities=14% Similarity=0.085 Sum_probs=240.0
Q ss_pred CccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHH
Q 007862 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAA 94 (587)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 94 (587)
.|..+..+.+..++..+..-. .....+.+.+++|.+.++.+|+.+.+.++...+.+++|+++|| +|||++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~ti-v~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~-~Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATV-LHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDR-IGFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHH
Confidence 344445555555555444443 3444456688999999999999999999999999999999999 59999999999999
Q ss_pred HHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC
Q 007862 95 ILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 174 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 174 (587)
.+ +.+.++++. +.+.++++|.++|+|.++..|.....+.+.+
T Consensus 82 ~~------------~~~~~~~a~--------------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~ 123 (495)
T PRK14995 82 GL------------ASLAAAFSP--------------------------TASWLIATRALLAIGAAMIVPATLAGIRATF 123 (495)
T ss_pred HH------------HHHHHHHcC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99 888887765 7788999999999999999998888887877
Q ss_pred CCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhH
Q 007862 175 DATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGI 254 (587)
Q Consensus 175 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (587)
+++ ++|+++++++....++|..+||.+++++.+..+|||.|++..++.++.+++.+...++.+.++.++.+....
T Consensus 124 ~~~-----~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~ 198 (495)
T PRK14995 124 TEE-----KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHA 198 (495)
T ss_pred CCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhH
Confidence 431 349999999999999999999999999999999999999987766666555444333321111111111110
Q ss_pred H----H--HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcch-hH-----HHHHhhhccCCCCCCCCCCCC
Q 007862 255 G----Q--VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQF-RF-----LNKAAMIVDNNELKPDGTPVN 322 (587)
Q Consensus 255 ~----~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----l~~~~~~~~~~~~~~~~~~~~ 322 (587)
. . .+....+.. .. +.. ...... .. +......++ . ....+..
T Consensus 199 ~~~~~~~~~l~~~~~~~----~~---~~~----------------~~~~~~~~~~~~~~~l~~f~~~e---~-~~~~p~~ 251 (495)
T PRK14995 199 LMLIVAILLLVYSAKTA----LK---GFL----------------SLWVTSLTLLTGALLLGLFIRTQ---L-AASRPMI 251 (495)
T ss_pred HHHHHHHHHHHHHHHhc----cc---cCC----------------chHHHHHHHHHHHHHHHHHHHHH---h-cCCCCCc
Confidence 0 0 000111110 00 000 000000 00 000001110 0 0111222
Q ss_pred ccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhh
Q 007862 323 QWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTV 402 (587)
Q Consensus 323 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l 402 (587)
|++.+++ |.+.............+.........+.......+. ...+.......+...+..++..++
T Consensus 252 ~~~lf~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~-------~~ag~~~~~~~~~~~~~~~~~g~l 318 (495)
T PRK14995 252 DMRLFTH------RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSP-------LEAGMFMLPVMVASGFSGPIAGIL 318 (495)
T ss_pred CHHHhCC------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221 111111111111110011111000111100001110 111222223344444555554443
Q ss_pred hHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHH
Q 007862 403 LVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEF 482 (587)
Q Consensus 403 ~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~ 482 (587)
.+|+++ ++.+..|+++.+++...+.... ...+.+......++.++|.+...++....
T Consensus 319 ----~~r~g~-------~~~~~~g~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~ 375 (495)
T PRK14995 319 ----VSRLGL-------RLVATGGMALSALSFYGLAMTD------------FSTQQWQAWGLMALLGFSAASALLASTSA 375 (495)
T ss_pred ----HHHcCc-------hHHHHHHHHHHHHHHHHHHHhc------------CCCchHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 666532 3456677777776665544321 12244445567788899999999999999
Q ss_pred HHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007862 483 FNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 519 (587)
Q Consensus 483 ~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~ 519 (587)
+.+.+|++.++.++++.++.+.+|+.+|..+.+.+.+
T Consensus 376 ~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 376 IMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998888764
No 19
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.90 E-value=2.9e-22 Score=210.83 Aligned_cols=156 Identities=16% Similarity=0.093 Sum_probs=136.5
Q ss_pred hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEee
Q 007862 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTL 115 (587)
Q Consensus 36 ~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 115 (587)
......+++.+++|.|..+.+++.+++.++..++.++.|+++|| +|||+++.++.++..+ +..+.++
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~~------------~~~~~~~ 78 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDR-FGARKTLAVFIVIWGV------------FTGLQAF 78 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHh-cCcceeeHHHHHHHHH------------HHHHHHH
Confidence 33445556899999999999999999999999999999999999 5999999999999888 7766666
Q ss_pred eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHH
Q 007862 116 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 195 (587)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 195 (587)
+. +++.++++|++.|++.+...++...++.|.+|+++ |++.+++....
T Consensus 79 ~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~ 126 (399)
T TIGR00893 79 AG--------------------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSA 126 (399)
T ss_pred Hc--------------------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHh
Confidence 54 67889999999999999999999999999999754 99999999999
Q ss_pred HHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 196 FTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 196 ~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
.++|..+++.+++++.+..+||+.|.+.++..++..+..++
T Consensus 127 ~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 127 QGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred chHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999988999999999877766655544433
No 20
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.89 E-value=5.8e-22 Score=226.77 Aligned_cols=154 Identities=11% Similarity=0.087 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEee
Q 007862 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTL 115 (587)
Q Consensus 36 ~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 115 (587)
+.....+++.+++|++..+.+++.+++.++..++++++|+++|| +|||+++++++++..+ +.++.++
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR-~GRR~~lii~lil~~i------------~~ll~af 251 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADK-LGRKQCLLICLSVNGF------------FAFFSSF 251 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH------------HHHHHHH
Confidence 45566678889999999999999999999999999999999999 6999999999998888 7766666
Q ss_pred eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHH
Q 007862 116 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 195 (587)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 195 (587)
+. +++.++++|+++|+|.|+..|+...+++|.+|++. |++.+++..+.
T Consensus 252 a~--------------------------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~ 299 (742)
T TIGR01299 252 VQ--------------------------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMF 299 (742)
T ss_pred Hh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHH
Confidence 54 67889999999999999999999999999999754 99999999999
Q ss_pred HHHHHHHHhhhhhhcccc-------------cchhhHHHHHHHHHHHHHHHH
Q 007862 196 FTVVILITQTVLVYIQDS-------------VSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 196 ~~~g~~i~~~~~~~i~~~-------------~~w~~~f~i~~~~~~~~~~~~ 234 (587)
..+|.++++.++..+... .+||+.|++.++..++.+++.
T Consensus 300 ~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~ 351 (742)
T TIGR01299 300 WMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGAL 351 (742)
T ss_pred HHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999998876555432 368999988777666555443
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.89 E-value=3.7e-22 Score=217.11 Aligned_cols=164 Identities=12% Similarity=0.077 Sum_probs=136.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhccc
Q 007862 23 LGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFV 102 (587)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~ 102 (587)
+...++..+..+.....+ +.+.+++|+|.++.+++.+++.++..++.+++|+++|| +|||+++.++.++..+
T Consensus 29 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~~~~~~~~~~~------ 100 (434)
T PRK11663 29 YLGYALFYFTRKSFNAAM-PEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR-SNARYFMGIGLIATGI------ 100 (434)
T ss_pred HHHHHHHHHhhhhHHHhh-HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh-cCCchhHHHHHHHHHH------
Confidence 333333333333444444 45567899999999999999999999999999999999 5999999999999998
Q ss_pred ccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccc
Q 007862 103 TKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGV 182 (587)
Q Consensus 103 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 182 (587)
+.++.+++. +++.+++.|++.|++.|...+....++.|++|+++
T Consensus 101 ------~~~~~~~~~--------------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~---- 144 (434)
T PRK11663 101 ------INILFGFSS--------------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE---- 144 (434)
T ss_pred ------HHHHHHHHh--------------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH----
Confidence 877666654 67788899999999999999999999999999755
Q ss_pred cchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 007862 183 KGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 183 ~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~ 232 (587)
|++++++++...++|..+++.+.+++.+.++||+.|++.++..++..+
T Consensus 145 --rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 145 --RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987766554433
No 22
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.89 E-value=5.4e-22 Score=212.47 Aligned_cols=391 Identities=13% Similarity=0.087 Sum_probs=241.1
Q ss_pred ccccCCCCccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhh-----HHHHHHHHHHHHHHHhhhhHHHhhccc
Q 007862 8 KDQKKPGGWKA-MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTS-----AANILNIWGGVTNFAPLLGAFISDTYI 81 (587)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~-----~~~i~~~~~~~~~~~~~~~G~laD~~~ 81 (587)
+|+..+.+|+. ........++...++......++.|+ +++|.+..+ .+++.++..+...++.++.|+++|| +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~ 81 (408)
T PRK09874 4 CENDTPINWKRNLTVAWLGCFLTGAAFSLVMPFLPLYV-EQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADR-K 81 (408)
T ss_pred CcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-h
Confidence 34444455655 44445666677777777777777776 568988655 4888999999999999999999999 5
Q ss_pred cchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccc
Q 007862 82 GRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGG 161 (587)
Q Consensus 82 Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 161 (587)
|||+++.++.++..+ +.+++.+.. +++.+++.|++.|++.+
T Consensus 82 g~r~~~~~~~~~~~~------------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~- 122 (408)
T PRK09874 82 GRKIMLLRSALGMGI------------VMVLMGLAQ--------------------------NIWQFLILRALLGLLGG- 122 (408)
T ss_pred CcHHHHHHHHHHHHH------------HHHHHHHHh--------------------------hHHHHHHHHHHHHHhhh-
Confidence 999999999988888 766555433 67788999999999865
Q ss_pred ccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhcccee
Q 007862 162 IRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLY 241 (587)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 241 (587)
..+....++.|.+|+++ |+++.++.....++|..++|.+++.+.+..+|++.|++..+..++..+..++..++.
T Consensus 123 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 123 FVPNANALIATQVPRNK------SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hHHhHHHHHHHhcCHhh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 46777788889888754 899999999999999999999999999889999999988776665554433322211
Q ss_pred eeeCCCCChhhhHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCC
Q 007862 242 VLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPV 321 (587)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (587)
.. +.+++... +..+....
T Consensus 197 ~~--~~~~~~~~----------------------------------------------~~~~~~~~-------------- 214 (408)
T PRK09874 197 FQ--PVSKKEML----------------------------------------------HMREVVTS-------------- 214 (408)
T ss_pred cc--cccchhhh----------------------------------------------HHHHHHHh--------------
Confidence 00 00000000 00000000
Q ss_pred CccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhh
Q 007862 322 NQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDT 401 (587)
Q Consensus 322 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~ 401 (587)
..+.+.....+... ..+........+.............. ......+.+..+..++.++..+..++
T Consensus 215 ----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~l~~~~~~~~~g~ 280 (408)
T PRK09874 215 ----------LKNPKLVLSLFVTT---LIIQVATGSIAPILTLYVRELAGNVS-NIAFISGMIASVPGVAALLSAPRLGK 280 (408)
T ss_pred ----------CcCCchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111011100 11111111111110000000000000 00000111112223333344443333
Q ss_pred hhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHH
Q 007862 402 VLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIE 481 (587)
Q Consensus 402 l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~ 481 (587)
+ .||+++ ++.+..+..+..++++..... .+.+.+.+..++.+++.+...|...+
T Consensus 281 l----~dr~g~-------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (408)
T PRK09874 281 L----GDRIGP-------EKILITALIFSVLLLIPMSFV---------------QTPLQLGILRFLLGAADGALLPAVQT 334 (408)
T ss_pred H----Hhcccc-------chhHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHhhhHhhHHHHHH
Confidence 3 555533 344555555555444443322 23445556677889999999999999
Q ss_pred HHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007862 482 FFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 561 (587)
Q Consensus 482 ~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~ 561 (587)
...+..|++.+|+..++.+....+|..+++.+.+.+.+.. ++...|...+++.+++.+..+...
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~----------------g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 335 LLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY----------------GFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc----------------chhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888876422 356778888888888777665544
Q ss_pred hh
Q 007862 562 RR 563 (587)
Q Consensus 562 ~~ 563 (587)
++
T Consensus 399 ~~ 400 (408)
T PRK09874 399 RR 400 (408)
T ss_pred HH
Confidence 33
No 23
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=2e-21 Score=208.92 Aligned_cols=176 Identities=15% Similarity=0.105 Sum_probs=141.4
Q ss_pred CCccchhHHHHHHHHHHHHhh---hhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHH
Q 007862 14 GGWKAMPYILGNETFERLATI---GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 90 (587)
.+.+..+......+++.+.++ ...+.++ .+.+++|.|..+.++..+++.++..++.++.|+++|| +||||+++++
T Consensus 7 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~ 84 (406)
T PRK15402 7 LGRQALLFPLCLVLFEFATYIANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDR-IGRRPVMLAG 84 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHH
Confidence 344455555555555544443 3333333 4678999999999999999999999999999999999 5999999999
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
.++..+ +.+....+. +.+.++..|+++|++.+...+...+.+
T Consensus 85 ~~~~~~------------~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i 126 (406)
T PRK15402 85 VAFFIL------------TCLAILLAQ--------------------------SIEQFTLLRFLQGIGLCFIGAVGYAAI 126 (406)
T ss_pred HHHHHH------------HHHHHHHHc--------------------------cHHHHHHHHHHHHhHhhhHHHHHHHHH
Confidence 988888 766655543 667789999999999999889999999
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
.|.+|+++ |.+..++.+....++..++|.+++++.+..+||+.|++.++..++..+..+
T Consensus 127 ~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 127 QESFEEAD------AIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHhChhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 99998754 788888888888899999999999999889999999987776665555433
No 24
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.89 E-value=8.2e-22 Score=215.91 Aligned_cols=151 Identities=15% Similarity=0.089 Sum_probs=126.7
Q ss_pred HHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccC
Q 007862 40 FMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWL 119 (587)
Q Consensus 40 ~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 119 (587)
+...+.+++|.+.++.+++.+.+.++..++.+++|+++|| +|||++++.+.++..+ +.++++++.
T Consensus 41 ~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~g~r~~l~~~~~~~~~------------~~~~~~~~~-- 105 (455)
T TIGR00892 41 FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR-FGCRPVVIAGGLLASL------------GMILASFSS-- 105 (455)
T ss_pred hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH-cCchHHHHhhHHHHHH------------HHHHHHHhh--
Confidence 3456788999999999999999999999999999999999 6999999999988888 777766654
Q ss_pred CCCCCCCCCCCCCCCCcccCCcchhHHHHH-HHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHH
Q 007862 120 PQLHPPKCDVAKPPFGQCKSANSMQLGVLV-MGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 198 (587)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 198 (587)
+...++ ..|++.|++.|...+.....+.|+++ + +|+++.++.+.+.++
T Consensus 106 ------------------------~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~------~r~~a~g~~~~~~~~ 154 (455)
T TIGR00892 106 ------------------------NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-R------RRPLANGLAMAGSPV 154 (455)
T ss_pred ------------------------hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-h------hHHHHHHHHHhcccH
Confidence 455554 45789999999876667778888885 3 389999999999999
Q ss_pred HHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 199 VILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 199 g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
|..++|.+++++.+.+|||+.|++.+++.+++.+..++
T Consensus 155 g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 155 FLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988876665554443
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.89 E-value=1.7e-21 Score=209.27 Aligned_cols=370 Identities=9% Similarity=-0.013 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcc
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHF 101 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~ 101 (587)
.+.+.++.+..++.+.+.+| .+.+++|.|+++.+++.+++.++..+++++.|+++|| +||||++..+.+++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr-~G~r~~l~~~~~l~~~----- 86 (393)
T PRK09705 14 LVLIGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQH-VSERRSVAISLLLIAV----- 86 (393)
T ss_pred HHHHHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCchHHHHHHHHHHHH-----
Confidence 34555555555555554444 6789999999999999999999999999999999999 5999999999999999
Q ss_pred cccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccc
Q 007862 102 VTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 181 (587)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 181 (587)
+.+.+++++ ++..++.+|+++|+|.|...++....+.|++| ++
T Consensus 87 -------~~~~~~~a~--------------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~--- 129 (393)
T PRK09705 87 -------GALMRELYP--------------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR--- 129 (393)
T ss_pred -------HHHHHHHCc--------------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc---
Confidence 999888876 66778999999999999999999999999886 33
Q ss_pred ccchhhhhhHHHHHHHHHHHHHhhhhhhccccc-chhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHHHHH
Q 007862 182 VKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVA 260 (587)
Q Consensus 182 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (587)
|+++++.+....++|..+++.+++++.+.. +||+.+.+..+..++++...+...++ +|++++
T Consensus 130 ---~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------- 192 (393)
T PRK09705 130 ---TPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAR----EVASSH---------- 192 (393)
T ss_pred ---chhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCcccc----------
Confidence 899999999999999999999999988775 89998876555444333332221111 111000
Q ss_pred HHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhh
Q 007862 261 AYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIK 340 (587)
Q Consensus 261 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 340 (587)
++. . .+.+ ... .+..+.
T Consensus 193 --------------~~~--------~-----------------------------------~~~~-----~l~-~~~~~~ 209 (393)
T PRK09705 193 --------------KTT--------T-----------------------------------TPVR-----VVF-TPRAWT 209 (393)
T ss_pred --------------CCC--------c-----------------------------------CCcc-----ccc-CHhHHH
Confidence 000 0 0000 000 011111
Q ss_pred hhH-HHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCCh
Q 007862 341 IIP-IWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITL 419 (587)
Q Consensus 341 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~ 419 (587)
... .......++....+.+.+.. + ...+.. ..+....+..++.++..++.+++ .||.+ +
T Consensus 210 l~~~~~~~~~~~~~~~~~lp~~l~-~-~g~s~~-------~ag~~~~~~~i~~i~g~~~~g~l----~~r~~-------~ 269 (393)
T PRK09705 210 LGVYFGLINGGYASLIAWLPAFYI-E-IGASAQ-------YSGSLLALMTLGQAAGALLMPAM----ARHQD-------R 269 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-H-cCCChh-------hhhHHHHHHHHHHHHHHHHHHHH----Hhhcc-------c
Confidence 111 11111222222222222221 1 111111 12233334445555555544333 55543 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCC-chhhHHHHHH
Q 007862 420 LQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFP-DHMKSIANSL 498 (587)
Q Consensus 420 ~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P-~~~rg~~~gl 498 (587)
++.+..++.+..++...+.... .+...+ ..++.+++.+...|.......+..+ ++.+|+..|+
T Consensus 270 ~~~~~~~~~l~~~~~~~~~~~~--------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~ 333 (393)
T PRK09705 270 RKLLMLALVLQLVGFCGFIWLP--------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAF 333 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHcc--------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHH
Confidence 3445556656555554433221 111112 2234567777777877777777775 6789999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 499 LFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRY 566 (587)
Q Consensus 499 ~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~ 566 (587)
.+....++..+++.+.+.+.+.+ +++...|.+.++.+++..+..+.+.+|++.
T Consensus 334 ~~~~~~~~~~~gp~~~G~l~~~~---------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 334 MQGIGFIIAGLAPWFSGVLRSIS---------------GNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---------------CCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 99999999999999999888643 234556677777777776666666665443
No 26
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=3.1e-21 Score=203.54 Aligned_cols=186 Identities=11% Similarity=0.136 Sum_probs=163.2
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhh
Q 007862 8 KDQKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI 87 (587)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~ 87 (587)
.+++.+..|..++.+-+..+.-...-|.... +.+-+.+++|.|..++|++++++..+..++.|+...+.|| +.||+++
T Consensus 4 ~~~~~~~~~~~l~aLa~~~F~igttEfv~~g-LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r-~~Rr~lL 81 (394)
T COG2814 4 PATARKPMWLALLALALAAFAIGTTEFVPVG-LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGR-LERRRLL 81 (394)
T ss_pred cccccccchHHHHHHHHHHHHHHhHHHHHHh-chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cchHHHH
Confidence 3445666777777666666666555564444 4456799999999999999999999999999999999999 6999999
Q ss_pred hHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccc
Q 007862 88 TFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSI 167 (587)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 167 (587)
+..+.++++ |.++.+++. ++..++++|++.|+..|.+.+...
T Consensus 82 l~~l~lFi~------------~n~l~alAp--------------------------~f~~Ll~aR~~~g~a~G~f~~i~~ 123 (394)
T COG2814 82 LGLLALFIV------------SNLLSALAP--------------------------SFAVLLLARALAGLAHGVFWSIAA 123 (394)
T ss_pred HHHHHHHHH------------HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 999999987 889999999999999999999999
Q ss_pred ccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 168 PFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 168 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
+..+|..|+++ |+++.+....+.+++..+|..++.++.+.+|||..|++-+++.+++++..+...|
T Consensus 124 ~~a~~lvpp~~------~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 124 ALAARLVPPGK------RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHcCccc------hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999866 9999999999999999999999999999999999999988887777766655444
No 27
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=3e-22 Score=219.88 Aligned_cols=177 Identities=12% Similarity=0.044 Sum_probs=135.6
Q ss_pred hhHHHHHHHHHHHHhhh---hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 19 MPYILGNETFERLATIG---LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~---~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
.+.++...++..+..|. ......+.+.+++|+|.++.+++.+++.+++.++++++|+++|| +||||++.++.+++.
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~ 105 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADG-KNTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhc-cCccchHHHHHHHHH
Confidence 44444444444443333 23344567889999999999999999999999999999999999 599999988887766
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.+..++... ..+.+...+++.|+++|++.|...|+...+++|++|
T Consensus 106 ~------------~~~~~~~~~~---------------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 152 (467)
T PRK09556 106 I------------CMLGFGASLG---------------------SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTP 152 (467)
T ss_pred H------------HHHHHHHHHh---------------------cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcC
Confidence 6 4444332100 001178889999999999999999999999999999
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccccc---chhhHHHHHHHHHHHHHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV---SWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~---~w~~~f~i~~~~~~~~~~~~~ 235 (587)
+++ |+++++++....++|.++++.+..++.+.. +|+..|.+.+++.++..++.+
T Consensus 153 ~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 153 RRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred ccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 865 999999999999999999999887766543 699988887766555444433
No 28
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.88 E-value=1.2e-21 Score=211.86 Aligned_cols=153 Identities=17% Similarity=0.265 Sum_probs=128.3
Q ss_pred HHHHHHHhhCCC--------hhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceE
Q 007862 40 FMVYLLKEYHMN--------QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGML 111 (587)
Q Consensus 40 ~~~yl~~~~~~s--------~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 111 (587)
....+..+++.+ ..+.+++.+++.++..++.+++|+++|| +|||++++++.+++.+ +.+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~-~grr~~~~~~~~~~~~------------~~~ 116 (481)
T TIGR00879 50 ALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDR-FGRKKSLLIIALLFVI------------GAI 116 (481)
T ss_pred hhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhh-hhhHHHHHHHHHHHHH------------HHH
Confidence 334455666666 8999999999999999999999999999 5999999999999888 777
Q ss_pred EEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhH
Q 007862 112 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 191 (587)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 191 (587)
+..+... ..+.+.++++|+++|+|.|...+....+++|.+|+++ |++++++
T Consensus 117 ~~~~~~~-----------------------~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~ 167 (481)
T TIGR00879 117 LMGLAAF-----------------------ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSL 167 (481)
T ss_pred HHHHhcc-----------------------ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhH
Confidence 6654331 1145679999999999999999999999999999865 9999999
Q ss_pred HHHHHHHHHHHHhhhh---hhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 192 YYTTFTVVILITQTVL---VYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 192 ~~~~~~~g~~i~~~~~---~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
++...++|..+++.++ +.+.+..+||+.|++.++..++.++..
T Consensus 168 ~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~ 213 (481)
T TIGR00879 168 YQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGL 213 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 777778899999999666555554443
No 29
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.88 E-value=3.7e-21 Score=212.67 Aligned_cols=176 Identities=14% Similarity=0.077 Sum_probs=130.7
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhh-HHH-----HHHHHHHHHHHHhhhhHHHhhccccchhhhhH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTS-AAN-----ILNIWGGVTNFAPLLGAFISDTYIGRFKTITF 89 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~-~~~-----i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 89 (587)
+|......+..++|.+.+. +..+..+++.++++.+.++ .++ +.++..++..++++++|+++|| +|||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDK-YGRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHH
Confidence 4455555566667766554 4566677889998754322 122 2466678889999999999999 599999999
Q ss_pred HHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccc
Q 007862 90 ASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPF 169 (587)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 169 (587)
+.+++.+ +.++++++.++.+++ ...+..+++.|+++|+|.|+..|+...+
T Consensus 93 ~~~l~~i------------~~~~~a~~~~~~~~g------------------~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 93 TIVIMSI------------STFCIGLIPSYATIG------------------IWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHH------------HHHHHHhcccHHHHH------------------HHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 9999999 888888866311000 0011258999999999999999999999
Q ss_pred ccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcc--------cccchhhHHHHHHHHHHH
Q 007862 170 GVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIG 229 (587)
Q Consensus 170 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~--------~~~~w~~~f~i~~~~~~~ 229 (587)
++|++|+++ |+++.++...+.++|..+++.+...+. ..+|||+.|++..+..++
T Consensus 143 ~~e~~p~~~------Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 143 VAEYSPDRK------RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHhCCCCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999999855 999999988888888888876554332 258999999997655443
No 30
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.88 E-value=3.7e-21 Score=205.18 Aligned_cols=157 Identities=8% Similarity=-0.030 Sum_probs=125.4
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
+.......+.+++++|+|+++.+++.+++.+++.++++++|+++|| +|||+++..+...... +.. .
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~------------~~~-~ 72 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDR-AFKRWFLFGSLATFAA------------AAG-R 72 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHH------------HHH-H
Confidence 3445566667899999999999999999999999999999999999 5999887655544444 322 1
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
.... .++..+++.|+++|+|.|.. +.....++|++|+++ |+++.++..
T Consensus 73 ~~~~-------------------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~ 120 (368)
T TIGR00903 73 LLDP-------------------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLS 120 (368)
T ss_pred HHHh-------------------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 1211 16788999999999999974 555566799999754 999999999
Q ss_pred HHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 194 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
...++|..+++.+++++.+.+|||+.|.+.+++.++..++++.
T Consensus 121 ~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 121 FAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999866665555444433
No 31
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.88 E-value=1.7e-21 Score=210.63 Aligned_cols=178 Identities=11% Similarity=0.017 Sum_probs=146.2
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
|.+|+..+.+...-+++..... ......+++++++|+|.++.+++.+++.++..++++++|+++|| +||||++..+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRI-NIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAI-IGARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhh-hHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hChHHHHHHHHH
Confidence 3456655555554444444433 33445558999999999999999999999999999999999999 599999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
++.+ +.++.+++. +...+++.|+++|++.|+..|+...++.|
T Consensus 82 ~~~~------------~~~~~~~~~--------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~ 123 (412)
T TIGR02332 82 LWGI------------ASTATMFAT--------------------------GPESLYLLRILVGIAEAGFLPGILLYLTF 123 (412)
T ss_pred HHHH------------HHHHHHHhc--------------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999 887777755 67789999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc------ccchhhHHHHHHHHHHHHHHHHHh
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD------SVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~------~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
++|+++ |++..+++....++|..+++.+++++.+ ..|||+.|.+.++..++..++.++
T Consensus 124 ~~~~~~------rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 124 WFPAYF------RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred HcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 999754 9999999999999999999999998863 469999999977766554444433
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.88 E-value=2.3e-21 Score=212.49 Aligned_cols=391 Identities=13% Similarity=0.125 Sum_probs=236.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
.+....++..+.. .+.....+++.+++|.+..+.+++.+.+.++..++.+++|+++|| +|||++++++.++..+
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~---- 79 (485)
T TIGR00711 6 VLMLGTFMAVLDS-TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKR-FGTRRLFLISTFAFTL---- 79 (485)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHH-hCcHHHHHHHHHHHHH----
Confidence 3334444444443 344555667789999999999999999999999999999999999 5999999999999999
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
+.++++.+. +...++++|+++|++.+...|...+++.|.+|+++
T Consensus 80 --------~~~~~~~~~--------------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~-- 123 (485)
T TIGR00711 80 --------GSLLCGVAP--------------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK-- 123 (485)
T ss_pred --------HHHHHhCcC--------------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH--
Confidence 887776654 67889999999999999999999999999999754
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhH--HH--
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGI--GQ-- 256 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 256 (587)
|++++++++...++|..++|.+++++.+.++||+.|++..+..++.+++.++..++.++.+.++...... ..
T Consensus 124 ----r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~ 199 (485)
T TIGR00711 124 ----RGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVG 199 (485)
T ss_pred ----HHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999877766655554443333221111111111000 00
Q ss_pred --HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhH-HH-----HHhhhccCCCCCCCCCCCCcccccc
Q 007862 257 --VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRF-LN-----KAAMIVDNNELKPDGTPVNQWRLCS 328 (587)
Q Consensus 257 --~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~-----~~~~~~~~~~~~~~~~~~~~w~~~~ 328 (587)
.+.....+.. + .+ +.. ....... .. .....++.+ ...+..+++.++
T Consensus 200 ~~~~~~~~~~~~----~---~~----~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 253 (485)
T TIGR00711 200 LGSLLYGLSEGP----E---RG----WFD-----------SNEILILSITGLVAIIAFVVWELT----DDNPLVDLRLFK 253 (485)
T ss_pred HHHHHHHHhhCC----C---CC----CCC-----------chHHHHHHHHHHHHHHHHHHHHHc----CCCCccCHHHHc
Confidence 0000000000 0 00 000 0000000 00 000000000 001111111111
Q ss_pred ceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccc-cCcccccccchhhhhhhhhchhhhhHHHh
Q 007862 329 IQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPAL 407 (587)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~i~~i~~~l~~~l~~~l~~~l~ 407 (587)
+ ++.....+..+.....++......+.+. ....+ .+ ...+.......++.++..++..++ .
T Consensus 254 ~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~~~~g--~s~~~~g~~~~~~~~~~~~~~~~~g~l----~ 315 (485)
T TIGR00711 254 Y-----RNFTIGCVYMSLLGLGLYGSFYLLPLYL-------QQVLG--YTALQAGLHILPVGLAPMLSSPIAGRM----G 315 (485)
T ss_pred C-----CChHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHHH----H
Confidence 1 1111111111111111111111111111 11111 00 011233333445555555554443 5
Q ss_pred hhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhC
Q 007862 408 RKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQF 487 (587)
Q Consensus 408 ~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~ 487 (587)
+|+ ++++.+..|.++.+++..++.... ....+.+.+....++.++|.+...++......+..
T Consensus 316 ~r~-------~~~~~~~~g~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~ 377 (485)
T TIGR00711 316 DKI-------DPRKLVTIGLILYAVGFYWRAFTF-----------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGL 377 (485)
T ss_pred hhc-------CcHHHHHHHHHHHHHHHHHHhccC-----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 554 334556667777776666554211 11234455666678899999998888888888999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007862 488 PDHMKSIANSLLFCSFGFASYLSSLLITIVHG 519 (587)
Q Consensus 488 P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~ 519 (587)
|++.+|+++|+.++.+.+|+.+++.+.+.+.+
T Consensus 378 ~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 378 PPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred CHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887764
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.88 E-value=1.4e-21 Score=205.15 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=132.0
Q ss_pred HHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeee
Q 007862 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLT 116 (587)
Q Consensus 37 ~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 116 (587)
...+.+++.+++|+|..+.+++.+++.++..++++++|+++|| +|||+++.++.++..+ +.+..+++
T Consensus 22 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~-~G~r~~~~~~~~~~~~------------~~~~~~~~ 88 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADK-FGPRAVAMLGGILYGL------------GFTFYAIA 88 (377)
T ss_pred hhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHH-cCccchhHHhHHHHHH------------HHHHHHHH
Confidence 3456678899999999999999999999999999999999999 5999999999999999 88776665
Q ss_pred ccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHH
Q 007862 117 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 196 (587)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 196 (587)
. +.+.+++.|.+.|++.|...++..+.+.+++|+ +|+++.+++....
T Consensus 89 ~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 135 (377)
T TIGR00890 89 D--------------------------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPD-------KRGLASGIIIGGY 135 (377)
T ss_pred H--------------------------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCc-------ccHHHHHHHHHhc
Confidence 5 778899999999999999888888888888863 3899999999999
Q ss_pred HHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 197 TVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 197 ~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
++|..+++.+.+.+.+..+||+.|++.+++.++..+..++
T Consensus 136 ~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 136 GLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred chhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999877777777777789999999988776665554433
No 34
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.88 E-value=8.8e-21 Score=206.13 Aligned_cols=168 Identities=16% Similarity=0.184 Sum_probs=126.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhC---CChhhHHHHHHHHHHHHH---HHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 25 NETFERLATIGLLANFMVYLLKEYH---MNQTSAANILNIWGGVTN---FAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~yl~~~~~---~s~~~~~~i~~~~~~~~~---~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
..++|.+.... ...+.+++.++++ .+..+.+.+..++..+.. ++++++|+++|| +||||++.++.+++.+
T Consensus 30 ~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr-~Grr~~l~~~~~~~~~-- 105 (432)
T PRK10406 30 GNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADK-HGRKKSMLISVCMMCF-- 105 (432)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHH--
Confidence 35566555554 6677778999984 566655554555544444 999999999999 5999999999999999
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
++++++++.++.+. ...++..+++.|+++|+|.|+..|.+.++++|.+|+++
T Consensus 106 ----------~~~~~~~~~~~~~~------------------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~ 157 (432)
T PRK10406 106 ----------GSLVIACLPGYETI------------------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR 157 (432)
T ss_pred ----------HHHHHhhcCCchhH------------------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc
Confidence 88777665421100 00134578999999999999999999999999999855
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhcc--------cccchhhHHHHHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIGA 230 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~--------~~~~w~~~f~i~~~~~~~~ 230 (587)
|+++.++.+...+.|..+++.+...+. +.+|||+.|++.++..++.
T Consensus 158 ------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 158 ------KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 899999988888888888887655443 2579999999877765544
No 35
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.88 E-value=3e-21 Score=205.45 Aligned_cols=175 Identities=14% Similarity=0.161 Sum_probs=149.5
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHH
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 90 (587)
.++.+|+.+.......+++.+..+.+....+ .+.+++|.|..+.+++.+++.++..++.++.|+++|| +|||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDR-YGRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHH
Confidence 4467788877778888888777776555544 6789999999999999999999999999999999999 5999999999
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
.++..+ +.++++++. ++..++..|++.|++.+...+...+++
T Consensus 84 ~~~~~~------------~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i 125 (405)
T TIGR00891 84 IVLFSA------------GTLACGFAP--------------------------GYITMFIARLVIGIGMGGEYGSSAAYV 125 (405)
T ss_pred HHHHHH------------HHHHHHHhc--------------------------cHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 998888 776666544 677899999999999999999999999
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc--hhhHHHHHHHHHHHHH
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS--WVIGFGIPTVLMIGAI 231 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~--w~~~f~i~~~~~~~~~ 231 (587)
.|.+|+++ |+++.+++....++|..+++.+++.+.+..+ ||+.|.+..+..++.+
T Consensus 126 ~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 126 IESWPKHL------RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 99999755 9999999999999999999999998887665 9999988665554443
No 36
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.88 E-value=1.3e-21 Score=211.22 Aligned_cols=168 Identities=13% Similarity=0.153 Sum_probs=143.4
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
+.+|+......+..+...+..+.. ....+++++++|.|+.+.+++.+++.++..++++++|+++|| +|||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr-~g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK-FGRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHH
Confidence 345565655565555555555543 555567889999999999999999999999999999999999 599999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +.+..+++. +.+.++++|+++|+|.|...++...++.|
T Consensus 92 ~~~~------------~~~~~~~~~--------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~ 133 (426)
T PRK12307 92 AYSV------------GTGLSGLAS--------------------------GVIMLTLSRFIVGMGMAGEYACASTYAVE 133 (426)
T ss_pred HHHH------------HHHHHHHHh--------------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999 877766654 77889999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVL 226 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~ 226 (587)
.+|+++ |+++.+++..+.++|..+++.+.+++.+..+||+.|++..+.
T Consensus 134 ~~~~~~------r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 134 SWPKHL------KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred hCCHhH------hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 999855 999999999999999999999999999989999999885543
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.88 E-value=8.6e-21 Score=203.98 Aligned_cols=174 Identities=13% Similarity=0.214 Sum_probs=147.2
Q ss_pred CCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHH
Q 007862 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (587)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 91 (587)
.+..|+.+..+....++.....|.....++. +.+++|.++++.++..+++.++..+++++.|+++|| +||||+++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQA-TDRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCcHHHHHHHH
Confidence 3457766555555555454555655555554 578999999999999999999999999999999999 69999999999
Q ss_pred HHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccc
Q 007862 92 IAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGV 171 (587)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 171 (587)
++..+ +.++..++. +++.+++.|+++|++.|...|...+++.
T Consensus 93 ~~~~~------------~~~~~~~~~--------------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 134 (394)
T PRK10213 93 VLLTL------------SCLLVSFAN--------------------------SFSLLLIGRACLGLALGGFWAMSASLTM 134 (394)
T ss_pred HHHHH------------HHHHHHHHC--------------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999 877766654 7888999999999999999999999999
Q ss_pred ccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHH
Q 007862 172 DQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAI 231 (587)
Q Consensus 172 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~ 231 (587)
|++|+++ |+++.++.....++|..++|.+++++.+.+|||+.|++.+++.++.+
T Consensus 135 ~~~~~~~------~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 135 RLVPPRT------VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHcCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 9998754 99999999999999999999999999999999999998776555443
No 38
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.88 E-value=3.6e-21 Score=201.38 Aligned_cols=359 Identities=10% Similarity=0.002 Sum_probs=227.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
.++...++..++.......++.|. .+++.+..+.+++.+++.++..++.++.|+++|| +||||++.++.++..+
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~~~~~~~~~~~---- 76 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYV-LAGTGSASVLSLAALAGMLPYVVLSPIAGALADR-YDRKKVMIGADLIRAV---- 76 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHH-HHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHh-hchhHHHHHHHHHHHH----
Confidence 345666677777766667777665 4689999999999999999999999999999999 5999999999888777
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
+.++..+.... +..+.+.+++.|+++|++.+...|+..+++.|.+|+++
T Consensus 77 --------~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-- 125 (365)
T TIGR00900 77 --------LVAVLPFVALL---------------------GGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ-- 125 (365)
T ss_pred --------HHHHHHHHHHc---------------------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH--
Confidence 55554443310 01267889999999999999999999999999999754
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHHHHH
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVA 260 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (587)
|++.+++.....++|..++|.+++++.+..+|++.|++.++..+++.+..+..+.+... ++++++..
T Consensus 126 ----~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------- 192 (365)
T TIGR00900 126 ----LTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELA-ASEIQALS-------- 192 (365)
T ss_pred ----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCC-Cccccccc--------
Confidence 99999999999999999999999999998999999998777665554443332211000 00000000
Q ss_pred HHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhh
Q 007862 261 AYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIK 340 (587)
Q Consensus 261 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 340 (587)
+ ....+..+. ++... . .|.+..
T Consensus 193 ----------~------------------------~~~~~~~~~-------------------~~~~~----~-~~~~~~ 214 (365)
T TIGR00900 193 ----------N------------------------AVLRDTREG-------------------IKFVL----K-NPLLRT 214 (365)
T ss_pred ----------h------------------------hHHHHHHhH-------------------HHHHH----c-CcHHHH
Confidence 0 000000000 00000 0 011111
Q ss_pred hhHHH-HHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCCh
Q 007862 341 IIPIW-AAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITL 419 (587)
Q Consensus 341 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~ 419 (587)
.+... .....+........+++.....+.+. ...+.+.....++.++..++..++ .+|. .+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l----~~~~-------~~ 276 (365)
T TIGR00900 215 LLLLALLFNLVFAPAIVALFPYVQSKYLGRGS-------THYGWVLAAFGLGALLGALLLGLL----GRYF-------KR 276 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch-------HHHHHHHHHHHHHHHHHHHHHHHH----HHHh-------ch
Confidence 11111 11111111110111111110000000 011223333444444444443332 4443 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHH
Q 007862 420 LQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLL 499 (587)
Q Consensus 420 ~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~ 499 (587)
++.+..+..+.+++....... .. +.+......++.+++.+...+...++..+.+|++.||++.|+.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (365)
T TIGR00900 277 MALMTGAIFVIGLAILVVGLT-------------PP-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQ 342 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHhh-------------ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 344555555555555544432 11 3455566778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q 007862 500 FCSFGFASYLSSLLITIVHG 519 (587)
Q Consensus 500 ~~~~~lg~~l~~~l~~~v~~ 519 (587)
+....++..+++.+.+.+.+
T Consensus 343 ~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 343 FSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998887764
No 39
>PRK03699 putative transporter; Provisional
Probab=99.87 E-value=2.5e-20 Score=199.95 Aligned_cols=176 Identities=13% Similarity=0.156 Sum_probs=142.8
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
..+||..+...+.-++.....+.. ..+.+.+.+++|+|.++.+++.+++.++..++.+++|+++|| +||||++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr-~g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVT-GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI-IPLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 345566666666555555554444 344445788999999999999999999999999999999999 599999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +.++..++. +...+++.|+++|++.|...++..+.+.|
T Consensus 81 ~~~i------------~~~l~~~~~--------------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~ 122 (394)
T PRK03699 81 LMIL------------AVAGLMFSH--------------------------SLALFSIAMFVLGVVSGITMSIGTFLITH 122 (394)
T ss_pred HHHH------------HHHHHHHcc--------------------------hHHHHHHHHHHHHHhhHhhccchhHHhhh
Confidence 8888 777666654 67788999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-ccchhhHHHHHHHHHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-SVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
.+|+++ |++..+..+...++|..++|.+.+++.+ ..+||+.|.+.++..++.+++.
T Consensus 123 ~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 123 VYEGKQ------RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred hcccch------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 998744 8999998888889999999999888754 5799999998777665554443
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.87 E-value=9.6e-21 Score=196.32 Aligned_cols=345 Identities=16% Similarity=0.220 Sum_probs=249.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
......++...+++......+.|. +++|.+..+.+++.+...+...++.++.|+++|| +||||++.++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~-~g~r~~~~~~~~~~~~---- 76 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDR-FGRRRVLLLGLLLFAL---- 76 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCCchhhHHHHHHHHH----
Confidence 445566677777777777777664 6789999999999999999999999999999999 5999999999999988
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
+.+...+.. +.+.++..|++.|++.+...+...+++.|.+|+++
T Consensus 77 --------~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~-- 120 (352)
T cd06174 77 --------GSLLLAFAS--------------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE-- 120 (352)
T ss_pred --------HHHHHHHhc--------------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc--
Confidence 777666543 67889999999999999999999999999999855
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHHHHH
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVA 260 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (587)
|++.+++.+...++|..++|.+++.+.+..+|++.|.+..+..++..+.....+| .
T Consensus 121 ----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~------- 176 (352)
T cd06174 121 ----RGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLR-------------L------- 176 (352)
T ss_pred ----hhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-------------H-------
Confidence 9999999999999999999999999999889999999888776666554433210 0
Q ss_pred HHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhh
Q 007862 261 AYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIK 340 (587)
Q Consensus 261 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 340 (587)
++.
T Consensus 177 -----------------------------------------------------------------------------~~~ 179 (352)
T cd06174 177 -----------------------------------------------------------------------------LLL 179 (352)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 000
Q ss_pred hhHH-HHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCCh
Q 007862 341 IIPI-WAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITL 419 (587)
Q Consensus 341 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~ 419 (587)
.... ..............+.+.. ...+.+. ...+.......++..+..++..++ .+|.++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~------ 241 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQ-EVLGLSA-------AEAGLLLSLFGLGGILGALLGGLL----SDRLGRR------ 241 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH-HhcCCCH-------HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhh------
Confidence 0000 0000000110000011110 0000000 112333444555666666654444 6776443
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHH
Q 007862 420 LQ-RIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSL 498 (587)
Q Consensus 420 ~~-~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl 498 (587)
+ .+..+.++..++.+..... .+.+......++.+++++...+...++..+..|++.|++.+|+
T Consensus 242 -~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (352)
T cd06174 242 -RLLLLIGLLLAALGLLLLALA---------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGL 305 (352)
T ss_pred -hHHHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHH
Confidence 3 5667777777776666543 2355667788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 007862 499 LFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFL 558 (587)
Q Consensus 499 ~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~ 558 (587)
.+....++..+++.+.+.+.+.. ++...|...+++.+++.+..+
T Consensus 306 ~~~~~~~~~~i~~~i~g~l~~~~----------------~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 306 FNTFGSLGGALGPLLAGLLLDTG----------------GYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc----------------CcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999998876421 334567777777777666543
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.87 E-value=4.4e-22 Score=207.53 Aligned_cols=166 Identities=18% Similarity=0.259 Sum_probs=143.3
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccc
Q 007862 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVT 103 (587)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~ 103 (587)
...++..++.......++.++.+++|.|..+.+++.+++.++..++.+++|+++|| +||||++.++.++..+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~------- 74 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDR-FGRRRVLIIGLLLFAL------- 74 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHH-S-HHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCeeeEeehhhhhhh-------
Confidence 44556666666666666668899999999999999999999999999999999999 5999999999999999
Q ss_pred cccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccccc
Q 007862 104 KYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 183 (587)
Q Consensus 104 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (587)
+.+...++. +.+.+++.|++.|++.+...++..+++.|.+|+++
T Consensus 75 -----~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~----- 118 (352)
T PF07690_consen 75 -----GSLLLAFAS--------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE----- 118 (352)
T ss_dssp -----HHHHHHHHC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC-----
T ss_pred -----HHHHhhhhh--------------------------hHHHHhhhccccccccccccccccccccccchhhh-----
Confidence 744433432 45589999999999999999999999999999855
Q ss_pred chhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 184 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 184 ~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
|++.+++.....++|..++|.+++++.+..+||+.|++.+++.++..++.
T Consensus 119 -~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 119 -RGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHH
T ss_pred -hhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhH
Confidence 99999999999999999999999999999999999999988888776643
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.87 E-value=1.1e-20 Score=199.77 Aligned_cols=171 Identities=15% Similarity=0.079 Sum_probs=134.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhH-HHHHHHHhhhcc
Q 007862 23 LGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITF-ASIAAILLAEHF 101 (587)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~-~~~~~~~~~~~~ 101 (587)
++..++..++.....+.++.|+++++|.|..+.+++.+++.+...+..++.|+++|| +||||.+++ +.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~----- 76 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDY-QGDRKGLILFCCLLAAL----- 76 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHHHHHHHHH-----
Confidence 456777888888888999999999999999999999999999999999999999999 599987665 4444445
Q ss_pred cccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccc
Q 007862 102 VTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 181 (587)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 181 (587)
+.++..++. +++.+++.|.+++.+.+...|....+..|..|++.
T Consensus 77 -------~~~~~~~~~--------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~--- 120 (375)
T TIGR00899 77 -------ACLLFAWNR--------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG--- 120 (375)
T ss_pred -------HHHHHHhcc--------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc---
Confidence 444444433 66778888999988888888888888888776532
Q ss_pred ccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 182 VKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 182 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+.+....++.+...++|..++|.+++++.+..+||+.|++.++..++..++.+.
T Consensus 121 -~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 121 -REAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred -hhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 122233677778889999999999999999899999999988766655554433
No 43
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.87 E-value=3.9e-21 Score=210.21 Aligned_cols=173 Identities=16% Similarity=0.054 Sum_probs=130.7
Q ss_pred hHHHHHHHHHHHHhhhh---HHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 20 PYILGNETFERLATIGL---LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~---~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+.++...++....+|.. .....+|+.++ |+|..+.+++.+++.++..++++++|+++|| +|||++++++.++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr-~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCCchhHHHHHHHHHH
Confidence 33444444444444432 34455678888 9999999999999999999999999999999 5999999999998888
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.+.+++... ...+...+++.|++.|++.|...|.....+.|++|+
T Consensus 106 ------------~~~~~~~~~~----------------------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~ 151 (452)
T PRK11273 106 ------------VMLFMGFVPW----------------------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQ 151 (452)
T ss_pred ------------HHHHHHhhhc----------------------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCCh
Confidence 6665554321 011567788999999999999999888889999987
Q ss_pred CCcccccchhhhhhHHHHHHHHHHH-HHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVIL-ITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~-i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
++ |++++++++.+.++|.. .+|.++..+....+||+.|++.+++.++..++.
T Consensus 152 ~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 152 KE------RGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred HH------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 54 99999999999999874 556544334334599999999777655544443
No 44
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.87 E-value=1.1e-20 Score=200.19 Aligned_cols=175 Identities=14% Similarity=0.087 Sum_probs=145.5
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
.+.++.+.+..++..++.....+.+ +++.+++|.|+.+.+++.+++.++..++.++.|+++|| +||||++.++.++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAF-PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDR-YGRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHHHHHH
Confidence 3444555555555555555444444 45688999999999999999999999999999999999 599999999999888
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.+....+. +...+++.|++.|++.+...+...+++.|.+|
T Consensus 82 ~------------~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 123 (385)
T TIGR00710 82 L------------SSLGLALSN--------------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYP 123 (385)
T ss_pred H------------HHHHHHHHc--------------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcC
Confidence 8 777665544 67788999999999999999999999999999
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+++ |++.+++.+...++|..++|.+++++.+..+||+.|++.++..++..+..+.
T Consensus 124 ~~~------~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 124 GEE------LSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred cHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 754 9999999999999999999999999999899999999877766655554443
No 45
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.87 E-value=8.6e-20 Score=196.43 Aligned_cols=176 Identities=10% Similarity=0.121 Sum_probs=144.7
Q ss_pred ccccCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhh
Q 007862 8 KDQKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI 87 (587)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~ 87 (587)
++.+|.+-||++....+..++..++.+....++++|+ +++|.|.++.+++.+.+.++..++.+++|+++|| +||||++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr-~g~k~~l 81 (402)
T TIGR00897 4 NNLQKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEI-IGPLKTM 81 (402)
T ss_pred ccHHHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHH
Confidence 3456778889999999999998888887888888887 6799999999999999999999999999999999 5999999
Q ss_pred hHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccc
Q 007862 88 TFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSI 167 (587)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 167 (587)
..+.++..+ +.+++.+.... ..++..+++.|.++|+|.+...+...
T Consensus 82 ~~~~~~~~~------------~~~~~~~~~~~----------------------~~~~~~l~~~~~i~G~g~~~~~~~~~ 127 (402)
T TIGR00897 82 MIGLLLWCV------------GHAAFIVFGLG----------------------HANYPLILLFYGIRGLGYPLFAYSFL 127 (402)
T ss_pred HHHHHHHHH------------HHHHHHHHhcc----------------------CccHHHHHHHHHHHHcchHHHHhHHH
Confidence 999999888 65433211100 01567788899999999998888888
Q ss_pred ccccccCCCCCcccccchhhhhhHHHHHHHHHH-HHHhhhhhhcccccchhhHHHHHHH
Q 007862 168 PFGVDQFDATTDEGVKGINSFFNWYYTTFTVVI-LITQTVLVYIQDSVSWVIGFGIPTV 225 (587)
Q Consensus 168 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~i~~~~~~~i~~~~~w~~~f~i~~~ 225 (587)
+.+.|.+|+++ |+++.+++....++|. .++|.+++++.+..||+..++....
T Consensus 128 ~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~ 180 (402)
T TIGR00897 128 VWVVYNTKQDN------LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALA 180 (402)
T ss_pred HHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 88889888754 9999999999999996 6899999999888897655554433
No 46
>PRK09952 shikimate transporter; Provisional
Probab=99.86 E-value=9.5e-20 Score=198.59 Aligned_cols=180 Identities=11% Similarity=0.093 Sum_probs=132.5
Q ss_pred CCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhh--CCChhhHHHHH-----HHHHHHHHHHhhhhHHHhhccccch
Q 007862 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEY--HMNQTSAANIL-----NIWGGVTNFAPLLGAFISDTYIGRF 84 (587)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~--~~s~~~~~~i~-----~~~~~~~~~~~~~~G~laD~~~Gr~ 84 (587)
.+.+||.........++|...........+.++.+++ +.++.+ +++. ++..++..++.++.|+++|| +|||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr-~Grr 94 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDR-LGRK 94 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHh-hccH
Confidence 3556666666666777776666654445555677776 677663 5443 23344566788889999999 5999
Q ss_pred hhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccc
Q 007862 85 KTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRP 164 (587)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~ 164 (587)
+++.++.+++.+ ++++++++.++.+. .......++..|+++|++.|+..|
T Consensus 95 ~~l~~~~~~~~~------------~~~~~~~~~~~~~~------------------~~~~~~~l~~~R~l~G~~~g~~~~ 144 (438)
T PRK09952 95 RMLMLTVWMMGI------------ATALIGLLPSFSTI------------------GWWAPVLLVTLRAIQGFAVGGEWG 144 (438)
T ss_pred HHHHHHHHHHHH------------HHHHHhcCCcHHHH------------------HHHHHHHHHHHHHHHHhhhcccHH
Confidence 999999999999 88887776531100 000123588899999999999999
Q ss_pred cccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcc--------cccchhhHHHHHHHHHHH
Q 007862 165 CSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIG 229 (587)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~--------~~~~w~~~f~i~~~~~~~ 229 (587)
++..++.|.+|+++ |+...+....+..+|..++..+...+. ..+|||+.|++.++..++
T Consensus 145 ~~~~~~~e~~p~~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 145 GAALLAVESAPKNK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHHHhCCCCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 99999999999855 898888888888999888877766554 357999999987765443
No 47
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.86 E-value=4e-20 Score=197.59 Aligned_cols=171 Identities=13% Similarity=0.142 Sum_probs=144.1
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|..+......+......+...+.++ .+.+++|.|.++.+++.+++.++..++++++|+++|| +|||+++.++.++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLT-ELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSR-YSLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChH-HHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHHHHHH
Confidence 3445555555555555565555554 5688999999999999999999999999999999999 5999999999999999
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.++.+++. +++.+++.|++.|++.|...+....++.|.+|+
T Consensus 81 ------------~~~l~~~~~--------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 122 (382)
T PRK10091 81 ------------GNAMFTLSS--------------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKP 122 (382)
T ss_pred ------------HHHHHHHhC--------------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCh
Confidence 887777655 778899999999999999988888888998887
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
++ |++.++.+..+.++|..++|.+++++.+..+||+.|.+.++..++..+.
T Consensus 123 ~~------~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 123 GK------VTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HH------hhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 44 8899999999999999999999999999899999999987766555443
No 48
>TIGR00895 2A0115 benzoate transport.
Probab=99.86 E-value=2.4e-20 Score=197.49 Aligned_cols=174 Identities=11% Similarity=0.112 Sum_probs=141.7
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
+..|+.+.......+....... ......+++.+++|.+..+.+++.++..++..++.++.|+++|| +|||+++.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLA-AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR-IGRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHH-HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH-hhhHHHHHHHHH
Confidence 3445544444444444444443 44455667788999999999999999999999999999999999 599999999998
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +.++..++. +.+.+++.|++.|++.+...+...+++.|
T Consensus 91 ~~~~------------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 132 (398)
T TIGR00895 91 LFSV------------FTLLCALAT--------------------------NVTQLLILRFLAGLGLGGLMPNLNALVSE 132 (398)
T ss_pred HHHH------------HHHHHHHcc--------------------------chHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 8888 766655543 66778999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~ 232 (587)
.+|+++ |+++++++....++|..+++.+++++.+..+|++.|++.++...+..+
T Consensus 133 ~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 186 (398)
T TIGR00895 133 YAPKRF------RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLL 186 (398)
T ss_pred HcCHHh------hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHH
Confidence 999754 999999999999999999999999999999999999887544443333
No 49
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.86 E-value=3.9e-20 Score=205.09 Aligned_cols=146 Identities=17% Similarity=0.160 Sum_probs=119.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCC
Q 007862 49 HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCD 128 (587)
Q Consensus 49 ~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 128 (587)
+.++.+.+++.+.+.++..++.+++|+++|| +|||+++.++.+++.+ +.++.+++..
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~-~Grr~~~~~~~~~~~v------------~~~~~~~~~~---------- 108 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADK-LGRKRVYGMELIIMII------------ATVASGLSPG---------- 108 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH------------HHHHHHHccC----------
Confidence 4566778899999999999999999999999 5999999999999888 7765555431
Q ss_pred CCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhh
Q 007862 129 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 208 (587)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 208 (587)
..+..+...++++|+++|++.|+..+....+++|.+|+++ |+++.++.+....+|..+++.++.
T Consensus 109 ----------~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 109 ----------SSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred ----------cccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011236789999999999999999999999999999865 999999999999999999988876
Q ss_pred hccc-----------------------ccchhhHHHHHHHHHHHHHHH
Q 007862 209 YIQD-----------------------SVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 209 ~i~~-----------------------~~~w~~~f~i~~~~~~~~~~~ 233 (587)
.+.. .++||+.|.+.++..++.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF 220 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence 5421 247999998877766555444
No 50
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.86 E-value=3.1e-20 Score=198.21 Aligned_cols=157 Identities=13% Similarity=0.067 Sum_probs=135.6
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
.|.++.+++..++..++...+.+.++.|+. ++|.|..++|++.+++.++..+++++.|+++|| +||||++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr-~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKR-IGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHH
Confidence 345788888888888888878788887765 789999999999999999999999999999999 599999999999999
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.+..+++. +++.+++.|+++|++.+...|...+.+.|..+
T Consensus 83 ~------------~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 124 (381)
T PRK03633 83 A------------GCAGLGLMV--------------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGT 124 (381)
T ss_pred H------------HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8 777666644 67889999999999999998888887888877
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhh
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVI 218 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~ 218 (587)
+++ |++.++++....++|..+||.+++.+.+...|..
T Consensus 125 ~~~------~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~ 161 (381)
T PRK03633 125 SRN------RGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVL 161 (381)
T ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHHHhcccccccchH
Confidence 644 9999999999999999999999999887643333
No 51
>TIGR00898 2A0119 cation transport protein.
Probab=99.86 E-value=1.3e-20 Score=208.46 Aligned_cols=147 Identities=12% Similarity=0.155 Sum_probs=128.0
Q ss_pred HHHHHhhCCC---hhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeecc
Q 007862 42 VYLLKEYHMN---QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAW 118 (587)
Q Consensus 42 ~yl~~~~~~s---~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 118 (587)
.-+.+|+|++ ..+.+++.+++.++..++.++.|+++|| +|||++++++.++..+ +.++.+++.
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr-~Grr~~~~~~~~~~~i------------~~~~~~~~~- 178 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDR-FGRKKVLLLSTLVTAV------------SGVLTAFSP- 178 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhh-ccchHHHHHHHHHHHH------------HHHHHHHcc-
Confidence 3467899999 9999999999999999999999999999 5999999999999888 776666654
Q ss_pred CCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHH
Q 007862 119 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 198 (587)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 198 (587)
+++.+++.|++.|++.++..++...++.|.+|+++ |+.+.++......+
T Consensus 179 -------------------------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~ 227 (505)
T TIGR00898 179 -------------------------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSL 227 (505)
T ss_pred -------------------------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999855 99999999899999
Q ss_pred HHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 199 VILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 199 g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
|.++++.++..+.+ ||+.|++.++..++..+..++
T Consensus 228 g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~ 262 (505)
T TIGR00898 228 GLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWF 262 (505)
T ss_pred HHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHh
Confidence 99999998877654 999999887766665555433
No 52
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.86 E-value=3.2e-20 Score=204.53 Aligned_cols=170 Identities=15% Similarity=0.215 Sum_probs=142.5
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
+.+|+.+..+....++..+... ....+.+++.+++|.|..+.+++.+.+.++..++.+++|+++|| +|||+++.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFV-LITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDR-YGRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHH
Confidence 3455555555555555555554 44455567889999999999999999999999999999999999 599999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +.+..+++. +.+.+++.|++.|++.++..++...++.|
T Consensus 94 ~~~~------------~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~ 135 (496)
T PRK03893 94 LFSV------------GTLACGFAP--------------------------GYWTLFIARLVIGMGMAGEYGSSATYVIE 135 (496)
T ss_pred HHHH------------HHHHHHHHh--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888 777766654 67889999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMI 228 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~ 228 (587)
.+|+++ |++++++++...++|..++|.+.+++.+.++||+.|++..+..+
T Consensus 136 ~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 136 SWPKHL------RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 999754 99999999999999999999999999999999999987554433
No 53
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.85 E-value=8.7e-20 Score=197.43 Aligned_cols=148 Identities=14% Similarity=0.125 Sum_probs=130.7
Q ss_pred HHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCC
Q 007862 43 YLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQL 122 (587)
Q Consensus 43 yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 122 (587)
.+.+++|.+..+.++..+++.++..++++++|+++|| +||||+++++.+++.+ +.+++.++.
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~------------~~~~~~~a~----- 102 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDR-IGRRPVLITGALIFTL------------ACAATLFTT----- 102 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHH-cCchHHHHHHHHHHHH------------HHHHHHHcC-----
Confidence 4778999999999999999999999999999999999 5999999999999988 887776654
Q ss_pred CCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHH
Q 007862 123 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 202 (587)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 202 (587)
+...++++|+++|++.+...+....++.|.+|+++ |++.++++....++|..+
T Consensus 103 ---------------------~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 155 (413)
T PRK15403 103 ---------------------SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPII 155 (413)
T ss_pred ---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHH
Confidence 67889999999999998777777788889998754 889999999999999999
Q ss_pred HhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 007862 203 TQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 203 ~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
||.+++++.+..|||+.|++.++..+++++..+
T Consensus 156 g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 156 GPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888999999998877666655433
No 54
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.3e-21 Score=205.97 Aligned_cols=184 Identities=12% Similarity=0.144 Sum_probs=164.7
Q ss_pred ccCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhH
Q 007862 10 QKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITF 89 (587)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 89 (587)
.+.+..++.+..+.+.+++++..=|.+-. ...-+++.+|.+++..|.+...+.+...++.|++|+++||| .||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iag-v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAG-VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhh-hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEee
Confidence 46677778888888888888888886655 44467888999999999999999999999999999999996 99999999
Q ss_pred HHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccc
Q 007862 90 ASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPF 169 (587)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 169 (587)
|..++.+ ++++.+++. +++.+++.|.+.|+|++.+.|.++++
T Consensus 104 G~~iW~~------------Av~~~~fs~--------------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~ 145 (493)
T KOG1330|consen 104 GIFIWTL------------AVFASGFSN--------------------------HFWQVLLCRGFVGIGEASYSPIAPSL 145 (493)
T ss_pred HHHHHHH------------HHHHHHHHH--------------------------HHHHHHHHHHHhccchhhhcccchhH
Confidence 9999999 988888875 88999999999999999999999999
Q ss_pred ccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHHHHhccc
Q 007862 170 GVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 170 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
++|.||+.+ |++.++++|+..++|..+|.+++.++.+..+ |||+|...+++.++..++.++..+
T Consensus 146 IaD~f~~~~------Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 146 IADSFPDDK------RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred hhhcCcchh------hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 999999876 9999999999999999999999999988766 999999999888877777655444
No 55
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.85 E-value=3.9e-20 Score=202.69 Aligned_cols=147 Identities=10% Similarity=0.090 Sum_probs=128.1
Q ss_pred hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCC
Q 007862 47 EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPK 126 (587)
Q Consensus 47 ~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 126 (587)
++|++.++.|++.+++.++..++++++|+++|| +|||+++.++.++..+ +.++..++..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~l~~~~~~~~~------------~~~~~~~~~~-------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGK-YVFKWSIGIGMFLSSV------------ISIVIPWAAG-------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHH-hCcchhhHHHHHHHHH------------HHHHHHHHHH--------
Confidence 789999999999999999999999999999999 5999999999998888 6655443321
Q ss_pred CCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhh
Q 007862 127 CDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTV 206 (587)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~ 206 (587)
.+...+++.|+++|++.++..|....++.|++|+++ |+++.++...+.++|..+++.+
T Consensus 129 ----------------~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l 186 (465)
T TIGR00894 129 ----------------GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPI 186 (465)
T ss_pred ----------------cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 145678999999999999999999999999999855 9999999999999999999999
Q ss_pred hhhccccc-chhhHHHHHHHHHHHHHHHHHh
Q 007862 207 LVYIQDSV-SWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 207 ~~~i~~~~-~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
++++.+.. +||+.|++.++..++..++++.
T Consensus 187 ~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 187 SGWLCESWGGWPMIFYVFGIVGCAWSLLWFV 217 (465)
T ss_pred HHHHHhccCCCCeehhhhhHHHHHHHHHHHH
Confidence 99999884 9999999988876666555444
No 56
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.85 E-value=1.3e-19 Score=193.98 Aligned_cols=176 Identities=14% Similarity=0.161 Sum_probs=144.7
Q ss_pred CCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHH
Q 007862 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (587)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 91 (587)
+++++|..+.......+...+.....+.+ +++.+++|.|+.+.+++.+++.+...++++++|+++|| +||||++.++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~grr~~~~~~~ 80 (394)
T PRK11652 3 RQRNVNLLFMLVLLVAVGQMAQTIYVPAI-ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDR-VGRRPVILVGM 80 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHh-cCChHHHHHHH
Confidence 44577877777777777666555444444 45678999999999999999999999999999999999 59999999999
Q ss_pred HHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccc
Q 007862 92 IAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGV 171 (587)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 171 (587)
++..+ +.+...++. +.+.+++.|++.|++.+...+....+..
T Consensus 81 ~~~~~------------~~~~~~~~~--------------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 122 (394)
T PRK11652 81 SIFIL------------GTLVALFAH--------------------------SLTVLIAASAIQGLGTGVGGVMARTLPR 122 (394)
T ss_pred HHHHH------------HHHHHHHHc--------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 98888 766655543 6778999999999999988888888888
Q ss_pred ccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 172 DQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 172 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
|.+++++ ++++.++...+..++..++|.+++++.+..+||+.|++.++..++..++
T Consensus 123 ~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 123 DLYEGTQ------LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred HhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH
Confidence 8887643 8888899889999999999999999998899999999877665544333
No 57
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.85 E-value=4.3e-20 Score=203.55 Aligned_cols=173 Identities=13% Similarity=0.055 Sum_probs=131.2
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+.+.......++..+..+... .+.+++.+++|+|.++.+++.+.+.++..++++++|+++|| +|||+++.++.+++.+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAA-PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDL-YGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHH
Confidence 344444444444444444443 33457789999999999999999999999999999999999 5999999999998888
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.++.+++. +...+++.|+++|++.+...+ ...+++|++|+
T Consensus 114 ------------~~~~~~~~~--------------------------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~ 154 (476)
T PLN00028 114 ------------AVFCMSLVS--------------------------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNG 154 (476)
T ss_pred ------------HHHHHHHhc--------------------------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcCh
Confidence 776666654 567788899999999887544 45578899997
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcc----c-----ccchhhHHHHHHHHHHHHHHHHHh
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ----D-----SVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~----~-----~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
++ |+++.++.....++|..+++.+.+.+. + ..|||+.|++.+++.++..++.++
T Consensus 155 ~~------rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 155 KI------VGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred hh------eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 55 999999988878888887776665442 1 258999999988776655544433
No 58
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.84 E-value=1.7e-19 Score=193.81 Aligned_cols=163 Identities=17% Similarity=0.193 Sum_probs=133.8
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.++.++...++..++.......++. +.+++|.++.+.+++.+++.+...++.+++|+++|| +||||+++++.+++.+
T Consensus 4 ~f~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr-~grr~vl~~~~~~~~~- 80 (393)
T PRK11195 4 GFYAIMAAQFFSALADNALLFAAIA-LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADS-FPKGRVMFIANGIKLL- 80 (393)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhc-cCCchhhHHHHHHHHH-
Confidence 4556666677777765555444444 478999999999999999999999999999999999 5999999999999888
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.+.+.++. + .++.|+++|++.++..|+..+++.|.+|++
T Consensus 81 -----------~~~~~~~~~--------------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~ 120 (393)
T PRK11195 81 -----------GCLLMLFGI--------------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGE 120 (393)
T ss_pred -----------HHHHHHHHH--------------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 665544432 2 278899999999999999999999999985
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHH
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 230 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~ 230 (587)
+ |+++.++.....++|..+||.++|++.+. .|+..+.+.....+++
T Consensus 121 ~------~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 121 K------LVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 4 99999999999999999999999999874 4777777665544433
No 59
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.84 E-value=3.2e-19 Score=191.38 Aligned_cols=181 Identities=13% Similarity=0.080 Sum_probs=128.5
Q ss_pred CCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHH-HHHHHhhhhHHHhhccccchhhhh-H
Q 007862 12 KPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGG-VTNFAPLLGAFISDTYIGRFKTIT-F 89 (587)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~-~~~~~~~~~G~laD~~~Gr~~~~~-~ 89 (587)
.+..-+..+..+...++.+++...+.+.++.|+.+++|.|.++.|++.+.... ...++++++|+ +|| +||||.++ .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr-~g~r~~~~~~ 87 (393)
T PRK15011 10 AKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDK-RGDRKSLIVF 87 (393)
T ss_pred chhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-ccchhHHHHH
Confidence 33334455777788999999999899999999999999999999999876655 55566666666 999 59998765 4
Q ss_pred HHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccc
Q 007862 90 ASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPF 169 (587)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 169 (587)
+.++..+ +..+.+++. +++.+++.+.+.+...+...|....+
T Consensus 88 ~~~~~~~------------~~~~~~~~~--------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~ 129 (393)
T PRK15011 88 CCLLGVL------------ACTLFAWNR--------------------------NYFVLLFVGVFLSSFGSTANPQMFAL 129 (393)
T ss_pred HHHHHHH------------HHHHHHHhh--------------------------HHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4454445 444444433 45555444444443444667777777
Q ss_pred ccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 170 GVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 170 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
..|..++++ +..+.+.++.....++|..++|.+++++.+.+|||..|++.++..++..+..+.
T Consensus 130 ~~~~~~~~~----~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 130 AREHADKTG----REAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHhhhcc----chHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 777665422 122344578888999999999999999999899999999887766655554443
No 60
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.84 E-value=8.1e-20 Score=197.57 Aligned_cols=392 Identities=10% Similarity=0.028 Sum_probs=224.9
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+..+......++..+++....++++.|+++++|+|..+.+++.+++.++..+++++.|+++|| +||||+++++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr-~g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDK-LGLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH
Confidence 355666677778888888889999999999999999999999999999999999999999999 5999999887665554
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+..........+ ........+..+.++..|...+...+...++.++
T Consensus 89 ------------~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (420)
T PRK09528 89 ------------LFGPFFIYVFAP----------------------LLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER 134 (420)
T ss_pred ------------HHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH
Confidence 322111100000 0000112222333333333333333333333321
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQ 256 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (587)
. .++++..++..+...++|..++|.+++++.+ .+|++.|++.+++.++.+++.++.+++.+++ ++.+
T Consensus 135 ~----~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------- 201 (420)
T PRK09528 135 V----SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST-AKVA------- 201 (420)
T ss_pred H----HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch-hhhc-------
Confidence 1 1236778888888899999999999999876 5899999988777666655554433321110 0000
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhh
Q 007862 257 VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVK 336 (587)
Q Consensus 257 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 336 (587)
++.+ ++ . +.....+..... . .+
T Consensus 202 ------~~~~---~~---~---------------------~~~~~~~~~~~l------------------------~-~~ 223 (420)
T PRK09528 202 ------NALG---AN---A---------------------SAVSLKDALALL------------------------K-LP 223 (420)
T ss_pred ------cchh---cc---c---------------------ccccHHHHHHHc------------------------c-CC
Confidence 0000 00 0 000000000000 0 01
Q ss_pred hhhhhhHHHHHHHHHH-hhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCC
Q 007862 337 CLIKIIPIWAAGIISL-TSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEG 415 (587)
Q Consensus 337 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~ 415 (587)
.++............+ ....+.+.+..... .+...+ . ...+.+..++.+...+..++..++ .||+++|
T Consensus 224 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~-~~~g~~~~~~~~~~~~~~~~~g~l----~dr~g~~-- 292 (420)
T PRK09528 224 KFWFLVLYVIGVACFYDVFDQQFPNFFASFF--ATPEQG--T-RVFGYLNSFQVFLEALIMFFAPFI----INRIGAK-- 292 (420)
T ss_pred CeEeehHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcc--h-HHHHHHHHHHHHHHHHHHHHHHHH----HHHhCcc--
Confidence 1111111111111111 11112222211110 011110 0 011233344444555555555544 7776543
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHH
Q 007862 416 GITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIA 495 (587)
Q Consensus 416 ~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~ 495 (587)
+.+..+.++.++++...++. .+.++++...++.+++.....+...++..+..|++.+++.
T Consensus 293 -----~~~~~~~~l~~~~~~l~~~~---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~ 352 (420)
T PRK09528 293 -----NALLLAGTIMAVRIIGSGFA---------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATI 352 (420)
T ss_pred -----hhhHHHHHHHHHHHHHHHhc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeee
Confidence 44566666666666555532 2455666667778888888888888999999999999987
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007862 496 NSL-LFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 561 (587)
Q Consensus 496 ~gl-~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~ 561 (587)
.+. +++...+|..+++.+.+.+.+.. ++...|...+++.++..++.++..
T Consensus 353 ~~~~~~~~~~lg~~ig~~~~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 353 YLVGFQFAKQLGAVFLSTLAGNLYDSI----------------GFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred eeehHHHHHHHHHHHHHHHHHHHHHhh----------------CchHHHHHHHHHHHHHHHHHHHHh
Confidence 655 56778899999999888887532 345667777777766665555443
No 61
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.84 E-value=4.7e-20 Score=193.73 Aligned_cols=155 Identities=17% Similarity=0.151 Sum_probs=134.0
Q ss_pred hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEee
Q 007862 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTL 115 (587)
Q Consensus 36 ~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 115 (587)
......+++.+++|.|..+.+++.+++.++..++.+++|+++|| +|||+++.++.++..+ +.++..+
T Consensus 13 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~------------~~~~~~~ 79 (379)
T TIGR00881 13 NFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDR-SNPRVFLPIGLILCAI------------VNLFFGF 79 (379)
T ss_pred hhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHh-hCCeehhHHHHHHHHH------------HHHHHHH
Confidence 33445568899999999999999999999999999999999999 5999999999999888 7777666
Q ss_pred eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHH
Q 007862 116 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 195 (587)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 195 (587)
+. +.+.+++.|++.|++.+...|...+++.|.+|+++ |++++++....
T Consensus 80 ~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~ 127 (379)
T TIGR00881 80 ST--------------------------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCS 127 (379)
T ss_pred hh--------------------------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhcc
Confidence 54 67889999999999999999999999999999755 99999999999
Q ss_pred HHHHHHHHh-hhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 007862 196 FTVVILITQ-TVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 196 ~~~g~~i~~-~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
.++|..++| .+++.+.+..+|++.|++.+++.++..++.+
T Consensus 128 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 128 HNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICF 168 (379)
T ss_pred chhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh
Confidence 999999999 5777777788999999887766555444433
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.84 E-value=8.4e-20 Score=198.83 Aligned_cols=157 Identities=13% Similarity=0.086 Sum_probs=127.3
Q ss_pred HHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeec
Q 007862 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTA 117 (587)
Q Consensus 38 ~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 117 (587)
....+++++ .|+|+++.+++.+++.++..++++++|+++|| +|||+++.++.++..+ +.+..++..
T Consensus 47 ~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr-~g~~~~~~~~~~~~~~------------~~~~~~~~~ 112 (438)
T TIGR00712 47 ALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR-SNPRVFLPAGLILSAA------------VMLLMGFVP 112 (438)
T ss_pred HhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc-cCCceehHHHHHHHHH------------HHHHHhccc
Confidence 444567775 59999999999999999999999999999999 5999999999888888 666544432
Q ss_pred cCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHH
Q 007862 118 WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFT 197 (587)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 197 (587)
... .+...+.+.|++.|++.|...+.....+.|++|+++ |++++++++...+
T Consensus 113 ~~~----------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~ 164 (438)
T TIGR00712 113 WAT----------------------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHN 164 (438)
T ss_pred ccc----------------------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHH
Confidence 111 155677889999999999999988999999999855 9999999999999
Q ss_pred HHHHHHhhhhhhcc-cccchhhHHHHHHHHHHHHHHHHHh
Q 007862 198 VVILITQTVLVYIQ-DSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 198 ~g~~i~~~~~~~i~-~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+|..+++.+.+... +..+||+.|++.++..++..+..++
T Consensus 165 ~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 165 IGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred hHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999988876544 4578999999987776665444333
No 63
>PRK15075 citrate-proton symporter; Provisional
Probab=99.84 E-value=2.8e-19 Score=194.54 Aligned_cols=173 Identities=12% Similarity=0.118 Sum_probs=125.0
Q ss_pred CccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHH-HHHHHH-----HHHHhhhhHHHhhccccchhhhh
Q 007862 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANIL-NIWGGV-----TNFAPLLGAFISDTYIGRFKTIT 88 (587)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~-~~~~~~-----~~~~~~~~G~laD~~~Gr~~~~~ 88 (587)
+|+.........+++.+... ......+.+.++++.++++.+... +....+ ..+++++.|+++|| +||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr-~Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFF-LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDR-VGRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh-hchHHHHH
Confidence 34444444454555544444 345566688999999888765443 222222 23678899999999 59999999
Q ss_pred HHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccc
Q 007862 89 FASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIP 168 (587)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 168 (587)
.+.+++.+ +.++++++.++..+ .......++++|+++|++.|+..|+...
T Consensus 91 ~~~~~~~~------------~~~l~~~~~~~~~~------------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~ 140 (434)
T PRK15075 91 VTLSIMAS------------GTLLIAFVPGYATI------------------GLAAPLLVLLGRLLQGFSAGVELGGVSV 140 (434)
T ss_pred HHHHHHHH------------HHHHHHhCCcHHHH------------------HHHHHHHHHHHHHHhhccccccHHHHHH
Confidence 99999999 88887776521100 0000125789999999999999999999
Q ss_pred cccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhc--------ccccchhhHHHHHHH
Q 007862 169 FGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI--------QDSVSWVIGFGIPTV 225 (587)
Q Consensus 169 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i--------~~~~~w~~~f~i~~~ 225 (587)
+++|++|+++ |++..+++....++|..+++.+++.+ .+.+|||+.|++..+
T Consensus 141 ~~~e~~p~~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 141 YLAEIATPGR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHhhCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9999999865 99999998888888888877777665 256899999987543
No 64
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=5.2e-20 Score=192.44 Aligned_cols=172 Identities=13% Similarity=0.080 Sum_probs=154.8
Q ss_pred hHHHHHHHHHHHHhhhhHHH---HHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 20 PYILGNETFERLATIGLLAN---FMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~---~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+.++...++-..++|-+--+ ..+++.++.++|.+|.|++.+++++++.++-.+.|.++|| .+.|+.+-+++++..+
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr-~npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDR-SNPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccc-CCCceeehHHHHHHHH
Confidence 77788888888888876555 4588999999999999999999999999999999999999 5999999999999999
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
..+++++++ +...+.+.-.+.|+..|.-.|.+..+++.+|++
T Consensus 107 ------------~nil~Gfs~--------------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr 148 (448)
T COG2271 107 ------------VNILFGFSP--------------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSR 148 (448)
T ss_pred ------------HHHHHhhhh--------------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCc
Confidence 888888876 778889999999999999999999999999999
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhh--hhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVL--VYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~--~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+| ||+..++..+.-|+|+++.|.+. +++.++++||..|++|++..++..+..++
T Consensus 149 ~e------RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 149 KE------RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred cc------cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999999999999 99999999999999999876665554444
No 65
>PRK11043 putative transporter; Provisional
Probab=99.83 E-value=5.8e-19 Score=189.36 Aligned_cols=162 Identities=13% Similarity=0.121 Sum_probs=133.6
Q ss_pred HHHHhhhhHHHHHH--HHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhccccccc
Q 007862 29 ERLATIGLLANFMV--YLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQ 106 (587)
Q Consensus 29 ~~~~~~~~~~~~~~--yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~ 106 (587)
..+++++.....|. .+++++|.|+++.+++.+++.++..++.+++|+++|| +|||+++.++.++..+
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~---------- 83 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDR-YGRKPVLLAGLSLFAL---------- 83 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhh-cCCcHHHHHHHHHHHH----------
Confidence 33444443344443 3788999999999999999999999999999999999 5999999999988888
Q ss_pred ccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchh
Q 007862 107 GKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGIN 186 (587)
Q Consensus 107 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 186 (587)
+.+...++. +.+.+++.|+++|++.+...+...+++.|.+|+++ ++
T Consensus 84 --~~~~~~~~~--------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~ 129 (401)
T PRK11043 84 --GSLGMLWVE--------------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------AN 129 (401)
T ss_pred --HHHHHHHhc--------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HH
Confidence 776655544 67788999999999998888888889999998744 77
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 007862 187 SFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 187 ~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
+.++......+++..++|.+++++.+..+||+.|++..+..++..++.+
T Consensus 130 ~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 178 (401)
T PRK11043 130 RVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL 178 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999999999999999987776665554443
No 66
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.82 E-value=1.7e-18 Score=185.27 Aligned_cols=168 Identities=13% Similarity=0.101 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
..+...+....++...... .+.+.+++|.|..+.+++.+++.++..+++++.|+++|| +||||+++++.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr-~g~r~~l~~~~~~~~i---- 80 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVG-LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADR-SGRKPVAIPGAALFII---- 80 (392)
T ss_pred HHHHHHHHHHHHHHHHhhh-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHH-hCChHHHHHHHHHHHH----
Confidence 3445555555555544444 445678899999999999999999999999999999999 5999999999999888
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
+.+....+. +...+++.|+++|++.+...+...+++.|.+|+++
T Consensus 81 --------~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~-- 124 (392)
T PRK10473 81 --------ASLLCSLAE--------------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR-- 124 (392)
T ss_pred --------HHHHHHHhC--------------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH--
Confidence 776655543 56778889999999999999999999999998755
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
|+++.++.+...++|..++|.+++.+.+..+|++.|++.++..++..++.
T Consensus 125 ----r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 125 ----RAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888999999998776655554443
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.82 E-value=6.3e-19 Score=186.91 Aligned_cols=153 Identities=15% Similarity=0.146 Sum_probs=132.8
Q ss_pred hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEee
Q 007862 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTL 115 (587)
Q Consensus 36 ~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 115 (587)
..+.++.+ .+++|.|..+.+++.+++.++..++.+++|+++|| +|||+++.++.++..+ +.+.+.+
T Consensus 10 ~~p~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~~~i------------~~~~~~~ 75 (377)
T PRK11102 10 YLPALPVI-AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADS-FGRKPVILGGTLVFAL------------AAVACAL 75 (377)
T ss_pred HhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhh-cCChHHHHHHHHHHHH------------HHHHHHH
Confidence 34555554 56899999999999999999999999999999999 5999999999999888 7766655
Q ss_pred eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHH
Q 007862 116 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 195 (587)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 195 (587)
+. +.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+..
T Consensus 76 ~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 123 (377)
T PRK11102 76 AQ--------------------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLV 123 (377)
T ss_pred Hc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHH
Confidence 44 66778999999999999999999999999998755 99999999999
Q ss_pred HHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 196 FTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 196 ~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
.++|..++|.+++++.+..+|++.|++.++..++..++.
T Consensus 124 ~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 124 MTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998999999998777666554443
No 68
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.82 E-value=1.9e-18 Score=185.31 Aligned_cols=389 Identities=11% Similarity=0.033 Sum_probs=229.6
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|..|......++...++....++++.|+++++|+|..+.+++.++..++..+++++.|+++|| +||||.++.+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDK-LGLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 356777788888888888899999999999999999999999999999999999999999999 5999999987766555
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+..........+. ........+.+++++.+++.+...|....+..|..+
T Consensus 81 ------------~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 129 (396)
T TIGR00882 81 ------------LFAPFFIYVFGPL------------------LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR- 129 (396)
T ss_pred ------------HHHHHHHHHhhhH------------------HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh-
Confidence 3322111000000 000022345666788888888888877766655322
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQ 256 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (587)
+++..++......++|.+++|.+++.+.+ .+|+..|++.+++.++..++.+..+++. ++++...
T Consensus 130 -------~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---- 193 (396)
T TIGR00882 130 -------NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA----PSSATVA---- 193 (396)
T ss_pred -------hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC----chhhhhh----
Confidence 24567778888889999999999998865 5999999988777666554443322211 1100000
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhh
Q 007862 257 VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVK 336 (587)
Q Consensus 257 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 336 (587)
+ ..+.+. . .+ +..+...+. .+ |
T Consensus 194 -------~-~~~~~~---~--------------------~~--~~~~~~~~l------------------------~~-~ 215 (396)
T TIGR00882 194 -------N-ALGANA---S--------------------AF--SLKLALELF------------------------RQ-R 215 (396)
T ss_pred -------c-cccccc---C--------------------CC--CHHHHHHHH------------------------cC-C
Confidence 0 000000 0 00 000000000 00 1
Q ss_pred hhhhhhHHHHH-HHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCC
Q 007862 337 CLIKIIPIWAA-GIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEG 415 (587)
Q Consensus 337 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~ 415 (587)
.++..+..... ...+.....+...+...... +...+ . ...+....+..+...+...+..+ +.||+++|
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~~--~-~~~g~~~~~~~i~~~~~~~~~g~----l~~r~g~~-- 284 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFA--TPQQG--T-RVFGYVTTMGELLNALIMFCAPL----IINRIGAK-- 284 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccc--h-HHHHHHHHHHHHHHHHHHHHHHH----HHHHhccc--
Confidence 11111111111 11111111111111110000 00010 0 00122233333444444444333 36666433
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHH
Q 007862 416 GITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIA 495 (587)
Q Consensus 416 ~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~ 495 (587)
+.+..+.++.++.+..... ..+.+++....++.+++.........++..+..|++.+++.
T Consensus 285 -----~~l~~~~~l~~l~~~~~~~---------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~ 344 (396)
T TIGR00882 285 -----NALLIAGTIMSVRIIGSSF---------------ATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATI 344 (396)
T ss_pred -----hhHHHHHHHHHHHHHHHHh---------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEe
Confidence 4456666666665554432 13555666667778888777777777888888999998887
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 007862 496 NSL-LFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFL 558 (587)
Q Consensus 496 ~gl-~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~ 558 (587)
.+. ++....+|+.+++.+.+.+.+.. ++...|.+.+++.++......
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAGNMYDSI----------------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHHHHHHhc----------------ccHHHHHHHHHHHHHHHHHHH
Confidence 766 66788999999999988887532 456677777777777665543
No 69
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.81 E-value=2.7e-19 Score=195.36 Aligned_cols=377 Identities=14% Similarity=0.156 Sum_probs=236.0
Q ss_pred HhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCC
Q 007862 46 KEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPP 125 (587)
Q Consensus 46 ~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 125 (587)
.++++|.++.+++.+.+..++.++++++|+++|| +|-|+++.++.++..+ ++++..+++.
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k-~G~r~v~~~~~~~sa~------------~t~l~P~aa~------- 125 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADK-FGARRVFFISGLISAL------------LTLLTPLAAS------- 125 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHH-cCchHHHHHHHHHHHH------------HHHHHHHHHH-------
Confidence 3688999999999999999999999999999999 5999999999999999 8888777663
Q ss_pred CCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhh
Q 007862 126 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 205 (587)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~ 205 (587)
.+...+++.|+++|++.|...|+...+.+.++|++| |+++.++.+.+..+|.+++-.
T Consensus 126 -----------------~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp 182 (466)
T KOG2532|consen 126 -----------------IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMP 182 (466)
T ss_pred -----------------hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 133468999999999999999999999999999976 999999999999999999999
Q ss_pred hhhhcccc-cchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHHHHHHHHhccccCCCCCCCCCccccCCC
Q 007862 206 VLVYIQDS-VSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPP 284 (587)
Q Consensus 206 ~~~~i~~~-~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 284 (587)
++|++.++ +||+.+|++.++..++..++++....+ +|++++.....+
T Consensus 183 ~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d----~P~~h~~is~~E---------------------------- 230 (466)
T KOG2532|consen 183 VSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD----SPSKHPNISEKE---------------------------- 230 (466)
T ss_pred hHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC----CcccCCCCCHHH----------------------------
Confidence 99999998 999999999998888887776654432 344333321000
Q ss_pred CccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeee
Q 007862 285 PKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVS 364 (587)
Q Consensus 285 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (587)
+..+.....+.........||+ .+++-.++++..+..+........+..+
T Consensus 231 -------------------l~~I~~~k~~~~~~~~~~vP~~-----------~i~ts~~vwai~~~~f~~~~~~~~l~~y 280 (466)
T KOG2532|consen 231 -------------------LKYIEKGKSEAHVKKKPPVPYK-----------AILTSPPVWAIWISAFGGNWGFYLLLTY 280 (466)
T ss_pred -------------------HHHHHhcccccccCCCCCCCHH-----------HHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000011345663 2233333333222222222111122222
Q ss_pred eeccccccCCCccccC-cccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHH--HHHHHHHH
Q 007862 365 QAMKMNRHLGPKFQIP-PGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILS--MIVAGLVE 441 (587)
Q Consensus 365 ~~~~~~~~~~~~~~i~-~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s--~~~~~~~~ 441 (587)
++.++...+ ++.+. .+.+.++..+...+...+.+.+ .|++..|.-..+..+++.-.....+.+ ++.+++..
T Consensus 281 ~PtY~~~VL--~f~v~~~G~~salP~l~~~~~k~~~g~l----sD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 281 LPTYLKEVL--GFDVRETGFLSALPFLAMAIVKFVAGQL----SDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred hhHHHHHHh--CCChhhhhHHHHHHHHHHHHHHHHHHHH----HHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 233333322 22222 3444555555555555555555 555544322234445554444444433 44443331
Q ss_pred HhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhh-hHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 442 RGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIG-QIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGV 520 (587)
Q Consensus 442 ~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~-~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~ 520 (587)
. ...++.+..+.++.+....... .+.-..+.+|++ .+..+|+.++...++..++|.+.+.+..
T Consensus 355 ~--------------~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~-a~~l~g~~~~~~~~~~~~~P~~vg~~~~- 418 (466)
T KOG2532|consen 355 D--------------EHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH-AGFVMGIINFVGALAGFIAPLLVGIIVT- 418 (466)
T ss_pred C--------------CcchHHHHHHHHHHHHcccchhhhHhhhhhccchH-HHHHHHHHHHHHHHHHHHHHHheeeEeC-
Confidence 1 1112222222233222222222 222222336654 8999999999999999999988877663
Q ss_pred cccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007862 521 TARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 561 (587)
Q Consensus 521 ~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~ 561 (587)
. +.... ....|.+.+++.+++.++|.++.
T Consensus 419 ~--~t~~e----------W~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 419 D--NTREE----------WRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred C--CCHHH----------HHHHHHHHHHHHHHhchheeEee
Confidence 1 01223 35788888888888888777665
No 70
>PRK10133 L-fucose transporter; Provisional
Probab=99.81 E-value=4.9e-18 Score=185.27 Aligned_cols=159 Identities=11% Similarity=0.014 Sum_probs=122.9
Q ss_pred cccccC-CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchh
Q 007862 7 QKDQKK-PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFK 85 (587)
Q Consensus 7 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~ 85 (587)
+||.+. +.+...+..+..+-+...+....... +.+.+++++|.|+.+.+++.+.+.++..+++++.|+++|| +||||
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr-~G~r~ 92 (438)
T PRK10133 15 DKDAGQSRSYIIPFALLCSLFFLWAVANNLNDI-LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKK-LSYKA 92 (438)
T ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHH
Confidence 344422 33444444444444555555444444 4455699999999999999999999999999999999999 59999
Q ss_pred hhhHHHHHHHHhhhcccccccccceEEEe---eeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccc
Q 007862 86 TITFASIAAILLAEHFVTKYQGKGMLTVT---LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGI 162 (587)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~ 162 (587)
++.++.+++.+ +.+++. .+. ++..++++|+++|+|.|..
T Consensus 93 ~l~~g~~~~~~------------~~~l~~~~~~a~--------------------------~~~~ll~~r~l~G~g~g~~ 134 (438)
T PRK10133 93 GIITGLFLYAL------------GAALFWPAAEIM--------------------------NYTLFLVGLFIIAAGLGCL 134 (438)
T ss_pred HHHHHHHHHHH------------HHHHHHHHHhcC--------------------------CHHHHHHHHHHHHHHHHHH
Confidence 99999999999 876642 222 7788999999999999999
Q ss_pred cccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcc
Q 007862 163 RPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ 211 (587)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~ 211 (587)
.++..+++.|..++++ |...++.+.....+|..+++.+++.+.
T Consensus 135 ~~~~~~~v~~~~~~~~------~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 135 ETAANPFVTVLGPESS------GHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HhhHHHHHHHhCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998755432 555688888888999999998876543
No 71
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.81 E-value=6.6e-18 Score=180.55 Aligned_cols=359 Identities=12% Similarity=0.028 Sum_probs=220.0
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhh----hHHHHHHH
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI----TFASIAAI 95 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~----~~~~~~~~ 95 (587)
+.+....++...++-...++++.|+ +++|+|.++.+++.+++.+...+++++.|.++|| +||++.. .++.++..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKD-ANHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHH
Confidence 3344444555555555566777776 6789999999999999999999999999999999 5985433 33332222
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ . ....++ +++.+++.|.+++.+.+...|...++..|. +
T Consensus 85 ~------------~--~~~~~~--------------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~ 123 (382)
T TIGR00902 85 A------------A--FSAGAH--------------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW-Q 123 (382)
T ss_pred H------------H--HHHhhh--------------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH-H
Confidence 2 1 111222 678888999999999999889888876542 2
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIG 255 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (587)
++|++.++......++|..++|.+++++.+.+|||..|.+......+.++.+ ..+++. +++++..
T Consensus 124 -------~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~~---~~~~~~~---- 188 (382)
T TIGR00902 124 -------KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIGF-LIKPTI---PPKDAIP---- 188 (382)
T ss_pred -------HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HcCCCC---CCCcccc----
Confidence 2378899999999999999999999999999999999987655433322222 211110 0100000
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehh
Q 007862 256 QVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEV 335 (587)
Q Consensus 256 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 335 (587)
.+ +.. .. + ++. . -.. .
T Consensus 189 --------------~~---~~~----------------~~-~--~~~---~------------------------~l~-~ 204 (382)
T TIGR00902 189 --------------ED---ESQ----------------GD-S--AFI---A------------------------LLK-N 204 (382)
T ss_pred --------------cc---ccc----------------cc-h--hHH---H------------------------HHc-C
Confidence 00 000 00 0 000 0 000 1
Q ss_pred hhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCc---ccccccchhhhhhhhhchhhhhHHHhhhhhc
Q 007862 336 KCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPP---GTVGVISMITIGLWLPFYDTVLVPALRKITK 412 (587)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~ 412 (587)
|.++..+. ..........+..++.. ..... .+ .++ +....+..+..++..++.+++ .+|+
T Consensus 205 ~~~~~~l~---~~~l~~~~~~~~~~~~~---~~l~~-~g----~s~~~~g~l~~~~~~~~i~~~~~~~~l----~~r~-- 267 (382)
T TIGR00902 205 PMNLRFLA---AVCLIQGAHAAYYGFSA---IYWQA-AG----ISASATGLLWGIGVLAEIIIFAFSNKL----FQNC-- 267 (382)
T ss_pred hHHHHHHH---HHHHHHHHHHHHHHHHH---HHHHH-CC----CCHhHHHHHHHHHHHHHHHHHHHhHHH----HhhC--
Confidence 11111111 11111122222222111 00111 11 122 223333444444444443333 5554
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhh
Q 007862 413 HEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMK 492 (587)
Q Consensus 413 r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~r 492 (587)
+.++.+..|.++..+.+..+... .+.+.++..-++.+++.+...+....++.+. |++.|
T Consensus 268 -----g~~~~l~~~~~~~~~~~~~~~~~---------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~ 326 (382)
T TIGR00902 268 -----SARDLLLISAIACVGRWAIIGAI---------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEI 326 (382)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHhH---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhH
Confidence 55567778888888887776643 2455566667899999999999999999988 99999
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHH
Q 007862 493 SIANSLLF-CSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIV 555 (587)
Q Consensus 493 g~~~gl~~-~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v 555 (587)
+++.++++ ...++|..+++.+.+.+.+.. +. ..|+..+++.+++.+
T Consensus 327 ~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~----------------g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 327 AKLQALYNALAMGGLIAIFTAFAGFIYPTL----------------GA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------cH-HHHHHHHHHHHHHHH
Confidence 99999986 577899999999999887532 22 456777777765543
No 72
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.80 E-value=1.5e-18 Score=192.99 Aligned_cols=417 Identities=13% Similarity=0.115 Sum_probs=241.2
Q ss_pred hhHHHHHHHHHHhh-----CCCh--hhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccc
Q 007862 35 GLLANFMVYLLKEY-----HMNQ--TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQG 107 (587)
Q Consensus 35 ~~~~~~~~yl~~~~-----~~s~--~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 107 (587)
+....+..++.+.. ..+. .+.+++.+++.++..++++++|+++|+ +|||++++++.+++.+
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~-~GRk~~l~~~~~~~~i----------- 131 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDR-IGRKKTLLLAVVLFLI----------- 131 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHH-----------
Confidence 55555555655532 1222 345899999999999999999999999 5999999999999999
Q ss_pred cceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhh
Q 007862 108 KGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 187 (587)
Q Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 187 (587)
|.++++++. ++..++++|+++|+|.|+...+.+.+++|..|++. |+.
T Consensus 132 -G~ii~~~a~--------------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~ 178 (513)
T KOG0254|consen 132 -GAIIIALAP--------------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGT 178 (513)
T ss_pred -HHHHHHHhh--------------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHH
Confidence 999999987 78899999999999999999999999999999865 999
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhcccc-cchhhHHHHHHHHHHHHHHHHHhc--cceeeeeCCCCChhhhHHHHHHHHHHh
Q 007862 188 FFNWYYTTFTVVILITQTVLVYIQDS-VSWVIGFGIPTVLMIGAIILFLVG--KKLYVLVEPEGSIFSGIGQVLVAAYKK 264 (587)
Q Consensus 188 ~~~~~~~~~~~g~~i~~~~~~~i~~~-~~w~~~f~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~ 264 (587)
..+.++...++|..++..++....+. ++||..+++..+..++..+.+++. .|++..+ .++ .....+ .+++
T Consensus 179 l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~--~g~-~~~a~~----~l~~ 251 (513)
T KOG0254|consen 179 LVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIE--KGR-LEEAKR----SLKR 251 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH--cCC-hHHHHH----HHHH
Confidence 99999999999999995555544433 589998888776655555553331 1111111 000 000000 0000
Q ss_pred -ccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhhhhH
Q 007862 265 -RRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIP 343 (587)
Q Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 343 (587)
+... .. + .....+........+. ........|+++.. ....|+....+.
T Consensus 252 l~g~~-~~---~----------------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~--~~~~~~~~i~~~ 301 (513)
T KOG0254|consen 252 LRGLS-PE---D----------------------VEVELELLKIKLLVEA--EVAEGKASWGELFS--PKVRKRLIIGLL 301 (513)
T ss_pred HhCCC-Cc---c----------------------hHHHHHHHHHHHHHhh--hcccccccHHHhcC--cchHHHHHHHHH
Confidence 0000 00 0 0000000000000000 00000012222211 111222211111
Q ss_pred HHHHHHHHHhhhccccceeeeeeccccccCCCccccCc----ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCCh
Q 007862 344 IWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPP----GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITL 419 (587)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~ 419 (587)
+..++. +........+....... . +++.+. -....++.++.++.. -+.||++||
T Consensus 302 l~~fqq-----~tG~~~~~~Y~~~if~~-~--g~~~~~~~~~~~~~~v~~~~t~~~~--------~lvd~~gRr------ 359 (513)
T KOG0254|consen 302 LQLFQQ-----LTGINYVFYYSTTIFKS-A--GLKSDTFLASIILGVVNFLGTLVAT--------YLVDRFGRR------ 359 (513)
T ss_pred HHHHHH-----HhCCceEEeehHHHHHh-c--CCCCchHHHHHHHHHHHHHHHHHHH--------HHHHHhccH------
Confidence 111111 11111111111111111 1 222221 111222333333332 236666433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHH
Q 007862 420 LQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLL 499 (587)
Q Consensus 420 ~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~ 499 (587)
..+..|.+.+.+++++++........... ......+..++..+++.........|..+.+..|.+|.+.|+.+.++.
T Consensus 360 -~lll~s~~~m~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~ 436 (513)
T KOG0254|consen 360 -KLLLFGAAGMSICLVILAVVGVFALYYPN--SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLA 436 (513)
T ss_pred -HHHHHhHHHHHHHHHHHHHHHHHhccCCC--cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHH
Confidence 56777777777777776655432111000 011223333444445566666777788888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHH-HHHHHHhhhccccCccccc
Q 007862 500 FCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIV-YFLYCARRYRYKSGIQSLE 574 (587)
Q Consensus 500 ~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v-~~~~~~~~~~~~~~~~~~~ 574 (587)
...+++.+.+-....+...... +....|..+++++.+... +++++.+|+|+++.|+.++
T Consensus 437 ~~~n~~~~~~v~~~~~~~~~~~----------------~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 437 VAVNWLWNFLISFFFPFITEAL----------------GIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----------------cccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 9999998888766555544211 012456777777777776 7888899999998886654
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.80 E-value=4.4e-18 Score=206.09 Aligned_cols=157 Identities=11% Similarity=0.064 Sum_probs=127.0
Q ss_pred CccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChh--hHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQT--SAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~--~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
..+.+...+...++..++..+....+..++..+++.+.+ ..+++.+++.+...++++++|+++|| +|||++++++.+
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr-~grk~~l~~~~~ 85 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADK-FSKNRVIRIVKL 85 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccc-ccHHHHHHHHHH
Confidence 445566666777777777766666777777777776544 46899999999999999999999999 599999999887
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+.++ +.++..+... ..+++.+++.|+++|++.+...|+..++++|
T Consensus 86 ~~~~------------~~~~~~~~~~-----------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 130 (1146)
T PRK08633 86 FEVG------------LTLLIVLAYY-----------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPE 130 (1146)
T ss_pred HHHH------------HHHHHHHHHH-----------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHH
Confidence 7665 4443333211 0157889999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS 213 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~ 213 (587)
.+|+++ |+++++++..+.++|.++|+.+++++.+.
T Consensus 131 ~~~~~~------r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 131 LVGKEN------LSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hcCccc------chhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999855 99999999999999999999999998765
No 74
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.79 E-value=4.3e-19 Score=192.47 Aligned_cols=398 Identities=12% Similarity=0.057 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCC
Q 007862 55 AANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPF 134 (587)
Q Consensus 55 ~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (587)
-+.+++++.++..+++.++|+++|| +|||..++++.++..+ +.++..++...+
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~-~GRK~~l~~~~~l~~~------------~~~~~~~s~~~~-------------- 114 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADR-FGRKNALLLSNLLAVL------------AALLMGLSKSAP-------------- 114 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hcchHHHHHHHHHHHH------------HHHHHHHHHHhh--------------
Confidence 3567889999999999999999999 5999999999999988 877777665322
Q ss_pred CcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhh-hh-ccc
Q 007862 135 GQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL-VY-IQD 212 (587)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~-~~-i~~ 212 (587)
+..+++.+|++.|+..|......+.++.|..|++. ||..-....+..++|..+++.++ .. +.+
T Consensus 115 ---------~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt 179 (485)
T KOG0569|consen 115 ---------SFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGT 179 (485)
T ss_pred ---------hHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCC
Confidence 67899999999999999999999999999999866 99999999999999999996665 22 334
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcc--ceeeee-CCCCChhhhHHHHHHHHHHhccccCCCCCCCCCccccCCCCcccc
Q 007862 213 SVSWVIGFGIPTVLMIGAIILFLVGK--KLYVLV-EPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFV 289 (587)
Q Consensus 213 ~~~w~~~f~i~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (587)
.-.|++.+..+.+..++.+++..+.. |+|... +.+....+ .++|..+-. + +++
T Consensus 180 ~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~-------~sl~~y~G~--~---~~~------------ 235 (485)
T KOG0569|consen 180 EDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEAR-------KALKFYRGK--E---DVE------------ 235 (485)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHH-------HHHHHHhCC--C---cch------------
Confidence 45699999988887776666544422 222111 11100000 011110000 0 000
Q ss_pred ccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccc-cccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeecc
Q 007862 290 LSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWR-LCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMK 368 (587)
Q Consensus 290 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (587)
.....+.....++ +.++.....++ .+.+.. .++.+...+.+.+ ...+....... ++ .
T Consensus 236 --------~~~e~~~~e~~~~----~~~~~~~~sl~~~~~~~~--lR~~~~i~~~v~~-----~qq~sGi~ai~--~Y-s 293 (485)
T KOG0569|consen 236 --------AEIEEMLREIEEE----ELEKKKQISLRQLLKNPT--LRRPLLIGIVVSF-----AQQFSGINAIF--FY-S 293 (485)
T ss_pred --------hHHHHHHHHHHHh----ccccccCCcHHHHhcCcc--hhHHHHHHHHHHH-----HHHhcCcceeH--HH-H
Confidence 0000001111111 01111111111 111111 1111111111111 11111111111 10 0
Q ss_pred ccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007862 369 MNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASA 448 (587)
Q Consensus 369 ~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~ 448 (587)
.+.....|+. +......|..... ...+...+...+.||++|| ..++.++.++.+..+.+..........
T Consensus 294 t~i~~~aG~~--~~~a~~an~~~g~-v~~~~t~~~~~lid~~gRR-------pLll~~~~~~~~~~~~~~~~~~l~~~~- 362 (485)
T KOG0569|consen 294 TSIFKTAGFT--PEEAQYANLGIGI-VNLLSTLVSPFLIDRLGRR-------PLLLISLSLMAVALLLMSIALFLSNSF- 362 (485)
T ss_pred HHHHHHcCCC--HHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 0111100221 1111111111111 1111112222346776554 445555555555554444332211100
Q ss_pred ccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCC
Q 007862 449 HLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPD 528 (587)
Q Consensus 449 ~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~ 528 (587)
....++..++....+....+....|..+-+..|++|++.|+.+++...+.+++.+++-....+.+....
T Consensus 363 ----~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~------- 431 (485)
T KOG0569|consen 363 ----GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI------- 431 (485)
T ss_pred ----hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence 001111112223333444555668888999999999999999999999999999999998888877532
Q ss_pred CccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccccCccc
Q 007862 529 WLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGIQS 572 (587)
Q Consensus 529 w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~~~~~~~ 572 (587)
+. +.|..+.+.+++..++.+...||+|+|+-++.
T Consensus 432 ---------g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI 465 (485)
T KOG0569|consen 432 ---------GP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEI 465 (485)
T ss_pred ---------cc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHH
Confidence 11 57888899999999999999999999876654
No 75
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.79 E-value=6.7e-18 Score=183.61 Aligned_cols=174 Identities=13% Similarity=0.016 Sum_probs=132.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHH-hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcc
Q 007862 23 LGNETFERLATIGLLANFMVYLLK-EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHF 101 (587)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~yl~~-~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~ 101 (587)
....++-.+....+.+.+.+.+.+ ++|+|.+|.+++.+++.++..++.++.|++.|| +|.|+++.++.++..+
T Consensus 39 s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr-~G~R~v~~~~~ll~~i----- 112 (462)
T PRK15034 39 SVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPI-FGGRRWTVFSTAILII----- 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHH-----
Confidence 344445555555566666667665 899999999999999999999999999999999 5999999999999988
Q ss_pred cccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccc
Q 007862 102 VTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 181 (587)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 181 (587)
.++..+++..- ...++..+++.|++.|++ |+..+.....++++||+++
T Consensus 113 -------~~~~~~~a~~~---------------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~--- 160 (462)
T PRK15034 113 -------PCVWLGIAVQN---------------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK--- 160 (462)
T ss_pred -------HHHHHHHHHcc---------------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH---
Confidence 77766654100 001778899999999998 7788999999999999855
Q ss_pred ccchhhhhhHHHHHHHHHHHHHhhhhhhcc------------------cccchhhHHHHHHHHHHHHHHHHHhc
Q 007862 182 VKGINSFFNWYYTTFTVVILITQTVLVYIQ------------------DSVSWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 182 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~------------------~~~~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
|+++++++....|+|..+++.+...+. +..+||.++++..++.+++.++.++.
T Consensus 161 ---rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 161 ---QGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred ---hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998777788776666554422 13447777777666666666555553
No 76
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.79 E-value=5.2e-17 Score=179.80 Aligned_cols=176 Identities=11% Similarity=0.102 Sum_probs=134.0
Q ss_pred CccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccc-----cchhh-hh
Q 007862 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-----GRFKT-IT 88 (587)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-----Gr~~~-~~ 88 (587)
.||..+..+...+...+..+.....++.| .++.|.+..+.+... ..... .++.+++|.++|| + ||||. ++
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~-l~~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr-~~~~~~Grrr~~ll 85 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAW-MTVENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDR-YTPPFLGRRRGWLL 85 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHc-ccccCCCCchHHHH
Confidence 44556666677776766667666666766 445699999988862 22222 3688999999999 7 99986 55
Q ss_pred HHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccc
Q 007862 89 FASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIP 168 (587)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 168 (587)
++.++..+ +...+++.. +..+.+.+...+++.+++.+...+...+
T Consensus 86 ~~~i~~~~------------~~~~~a~~~-----------------------~~~~l~~l~~~~~l~~~~~a~~~i~~~a 130 (491)
T PRK11010 86 ATQLLLLV------------AIAAMGFLE-----------------------PGTQLRWLAALAVVIAFCSASQDIVFDA 130 (491)
T ss_pred HHHHHHHH------------HHHHHHHcC-----------------------CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666656 554444432 1126778888999999999999999999
Q ss_pred cccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-ccchhhHHHHHHHHHHHHHHHHH
Q 007862 169 FGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-SVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 169 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
+..|++|+++ |+++.++...+.++|..+++.+++++.+ ..|||..|++.+++.++..+..+
T Consensus 131 ~~~~~~~~~~------rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 131 WKTDVLPAEE------RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHhcChhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999755 9999999999999999999999999988 57999999998776665544433
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.79 E-value=3.6e-17 Score=177.35 Aligned_cols=394 Identities=12% Similarity=0.056 Sum_probs=219.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccc-hhhhhHHHHHHHHhhh
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR-FKTITFASIAAILLAE 99 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr-~~~~~~~~~~~~~~~~ 99 (587)
.+-...++..+++-...++++.|+++++|+|..+.|++.+++.++..++++++|+++|| +|| |+++.++.++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr-~g~~r~~~~~~~~~~~~--- 81 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADK-WLSAQKVYAVCHFAGAL--- 81 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHH---
Confidence 34455556656666667999999999999999999999999999999999999999999 565 7788877777766
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC-
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT- 178 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~- 178 (587)
+.....+.. ++..+++.|++.+++.+...|.+.+...+...+..
T Consensus 82 ---------~~~~~~~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~ 126 (418)
T TIGR00889 82 ---------LLFFAAQVT--------------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGL 126 (418)
T ss_pred ---------HHHHHHHhc--------------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCC
Confidence 554444433 56667888888888877777666554322221000
Q ss_pred -cccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHH
Q 007862 179 -DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQV 257 (587)
Q Consensus 179 -~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (587)
..+...|.+.++ ++|.+++|.+++.+.....|+. |++.++..++.+++.+. .++.++ +++++....
T Consensus 127 ~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~~-f~~~~~~~~~~~~~~~~-~~e~~~--~~~~~~~~~--- 193 (418)
T TIGR00889 127 DVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNIQ-LYITAGSSALLGVFALT-LPDIPV--AKSTAKMSI--- 193 (418)
T ss_pred CchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhHH-HHHHHHHHHHHHHHHhc-CCCCCC--CccccccCH---
Confidence 000011444444 4788888888888754434543 55555544444433222 221110 000000000
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhh
Q 007862 258 LVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKC 337 (587)
Q Consensus 258 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 337 (587)
+ +..+. +..... .+.+.
T Consensus 194 -----~---------------------------------~~~~~-~~~~~~------------------------k~~~~ 210 (418)
T TIGR00889 194 -----K---------------------------------VMLGL-DAFILF------------------------KNKRM 210 (418)
T ss_pred -----H---------------------------------HHhhh-hHHHHh------------------------cCCCe
Confidence 0 00000 000000 00111
Q ss_pred hhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccc-cCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCC
Q 007862 338 LIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGG 416 (587)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~ 416 (587)
....+..+...............+.. . ...+...+.++. ...+....+..+..++...+.+++ .||++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l----~dr~g----- 279 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLH-E-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFF----LKRFG----- 279 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHH-H-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH----HHHhC-----
Confidence 01111111111111111110000100 0 000000000000 011333344444555555554444 66663
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHH
Q 007862 417 ITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIAN 496 (587)
Q Consensus 417 ~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~ 496 (587)
+++.+..+.++.++++........ ...+.+.++...++.+++++...+....++.+.+|++.|+++.
T Consensus 280 --~r~~l~~~~~~~~v~~~l~~~~~~-----------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~ 346 (418)
T TIGR00889 280 --IKKVMLLSLVAWALRFGFFAYGDP-----------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQ 346 (418)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHcCc-----------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 345677777777776655543210 0112233455678889999999999999999999999999999
Q ss_pred HHHH-HHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007862 497 SLLF-CSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 563 (587)
Q Consensus 497 gl~~-~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~ 563 (587)
|+.+ ..+.+|+.+++.+.+.+.+.....+. .++...|...+++.++..+.++++.++
T Consensus 347 g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~----------~~~~~~f~~~~~~~~i~~~l~~~~~~~ 404 (418)
T TIGR00889 347 GLFTLMCNGFGSLLGYILSGVMVEKMFAYGT----------FDWQTMWLFFAGYIAILAVLFMIFFKY 404 (418)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhccccC----------CchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9997 67889999999999988764311100 135667778888878777777777654
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.78 E-value=4e-17 Score=174.40 Aligned_cols=156 Identities=12% Similarity=-0.009 Sum_probs=119.1
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccch----hhhhHHHHHHHHhhhcc
Q 007862 26 ETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRF----KTITFASIAAILLAEHF 101 (587)
Q Consensus 26 ~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~----~~~~~~~~~~~~~~~~~ 101 (587)
-++..+++....++++.|+ +++|.|..+.|++.+++.+...++++++|.++|| +||+ +.+.++.++..+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l-~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~----- 85 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWL-KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKD-PSQLIPALRLLALLTLLFAV----- 85 (382)
T ss_pred HHHHHHHHHHHhhhHHHHH-HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhh-hcchHHHHHHHHHHHHHHHH-----
Confidence 4444455566677788887 5689999999999999999999999999999999 5994 333333222222
Q ss_pred cccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccc
Q 007862 102 VTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 181 (587)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 181 (587)
.. .... .+.+.++..|.+.+++.+...|...++..|..+
T Consensus 86 -------~~---~~~~-------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~------ 124 (382)
T PRK11128 86 -------AF---WFGA-------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQK------ 124 (382)
T ss_pred -------HH---HHhc-------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHHh------
Confidence 11 1111 167888889999999999999988887776522
Q ss_pred ccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHH
Q 007862 182 VKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAI 231 (587)
Q Consensus 182 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~ 231 (587)
+|++.++......++|..+||.+++++.+.+|||..|++.++..++.+
T Consensus 125 --~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 125 --QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred --hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 277888888888999999999999999999999999988776544443
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.78 E-value=1.3e-17 Score=202.32 Aligned_cols=144 Identities=11% Similarity=0.018 Sum_probs=110.0
Q ss_pred HHhhCCCh-hhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHH--HHHhhhcccccccccceEEEeeeccCCC
Q 007862 45 LKEYHMNQ-TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA--AILLAEHFVTKYQGKGMLTVTLTAWLPQ 121 (587)
Q Consensus 45 ~~~~~~s~-~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 121 (587)
..+.+.+. ...++..+++.+...++.+++|+++|| +|||+++.....+ ... +....++..
T Consensus 43 ~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr-~~rk~~~~~~~~~~~~~~------------~~~~~~~~~---- 105 (1140)
T PRK06814 43 SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADK-YDKAKLAKILKFAEIGIA------------ALAIYGFHL---- 105 (1140)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhh-ccHHHHHHHHHHHHHHHH------------HHHHHHHHH----
Confidence 33444333 346778888999999999999999999 5999986432221 111 111111111
Q ss_pred CCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHH
Q 007862 122 LHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVIL 201 (587)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 201 (587)
.+++.+++.|+++|++.++..|+..+++.|++++++ |+++.++..++.++|.+
T Consensus 106 ---------------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~ 158 (1140)
T PRK06814 106 ---------------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAIL 158 (1140)
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHH
Confidence 167889999999999999999999999999999865 99999999999999999
Q ss_pred HHhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 007862 202 ITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 202 i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~ 232 (587)
+||.++|++.+..+|++.|.+..+..+++++
T Consensus 159 igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~ 189 (1140)
T PRK06814 159 LGTIIGGLATISGNFVILVALLMGIAVLGWL 189 (1140)
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998554444444433
No 80
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=9.3e-18 Score=175.80 Aligned_cols=392 Identities=13% Similarity=0.068 Sum_probs=252.8
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHH
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 90 (587)
.|+.++|+++... ..+.-.+..+.+.+.+.+++.+++|+|+.|.+++..+-.+...+..++-|++.|| +|.|++.+++
T Consensus 8 ~k~~~~~~L~~S~-~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr-fGgR~~~~~s 85 (417)
T COG2223 8 GKRIARRNLWLST-LAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR-FGGRKWTILS 85 (417)
T ss_pred cccchhHHHHHHH-HHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc-cCchHHHHHH
Confidence 4556666665544 4445556777788889999999999999999999999999999999999999999 6999999999
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
.++..+ -.+.++++...| +.+.+++.+++.|++.| ..++..+++
T Consensus 86 ~~l~~I------------P~~~~~~a~~~~-----------------------~~~~ll~~gll~G~~Ga-sFav~m~~~ 129 (417)
T COG2223 86 MLLLLI------------PCLGLAFAVTYP-----------------------STWQLLVIGLLLGLAGA-SFAVGMPNA 129 (417)
T ss_pred HHHHHH------------HHHHHHHHccCC-----------------------chHHHHHHHHHHhcccc-eehcccccc
Confidence 999888 777777666433 44678899999998854 577899999
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc---hhhHHHHHHHHHHHHHHHHHhccceeeeeCCC
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS---WVIGFGIPTVLMIGAIILFLVGKKLYVLVEPE 247 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~---w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
+.+||++. +|.+.+++. ..|+|..+.+.+++.+....+ |+..-.+..+.++++.+++++..++....++.
T Consensus 130 s~~fP~~~------qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~ 202 (417)
T COG2223 130 SFFFPKEK------QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRAS 202 (417)
T ss_pred cccCChhh------hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 99999855 999999999 899999999999999999988 99999999988888877777755432211111
Q ss_pred CChhhhHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccc
Q 007862 248 GSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLC 327 (587)
Q Consensus 248 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~ 327 (587)
.++.. + . .++.
T Consensus 203 ~~~~~-----------------~--------------------------~---~~~~----------------------- 213 (417)
T COG2223 203 VKPQL-----------------P--------------------------A---QLKA----------------------- 213 (417)
T ss_pred ccccc-----------------h--------------------------h---HHHH-----------------------
Confidence 00000 0 0 0000
Q ss_pred cceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccc-cCcccccccchhhhhhhhhchhhhhHHH
Q 007862 328 SIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPA 406 (587)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~i~~i~~~l~~~l~~~l~~~l 406 (587)
+...|..+..+.+.......++.++-..+ +....+.+ .. ...+.......+...+..|+.+++
T Consensus 214 ----v~~~~~~W~lsllY~~tFG~Fvgfs~~l~------~~~~~~fg--~~~~~Ag~~a~~f~~~g~l~Rp~GG~L---- 277 (417)
T COG2223 214 ----VFSNKDTWLLSLLYFATFGGFVGFSAYLP------MYLVTQFG--LSPVTAGLIAFLFPLIGALARPLGGWL---- 277 (417)
T ss_pred ----HhcCcchHHHHHHHHHHHHHHHHHHHHHH------HHHHHhcC--CChhhHHHHHHHHHHHHHHHHhccchh----
Confidence 00011222222222222222222221111 11112221 11 112344445556666677776666
Q ss_pred hhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 007862 407 LRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQ 486 (587)
Q Consensus 407 ~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~ 486 (587)
.||++++ +...+.++.++++....+...... ....+....+..++...+..++-.......+...
T Consensus 278 sDR~Gg~-------rv~~~~f~~~~~~~~~l~~~~~~~--------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~i 342 (417)
T COG2223 278 SDRIGGR-------RVTLAVFVGMALAAALLSLFLTGF--------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVI 342 (417)
T ss_pred hhhccch-------hHHHHHHHHHHHHHHHHHcccccc--------ccCcchHHHHHHHHHHHHHhccCcchheeechHH
Confidence 6666443 445555555555555554332110 0112333333334444444444444455555555
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007862 487 FPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 563 (587)
Q Consensus 487 ~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~ 563 (587)
+|+ +.|...|+......+|++.-+...+...+.| +.+...|+++..+.+++.+..+.+..|
T Consensus 343 f~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t---------------g~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 343 FPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT---------------GSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHh-hhhHHHHHHHHhccccccchhHHHHHHHHhc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554 5788889988888888888777777776654 235678888888888888877666554
No 81
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.77 E-value=8.8e-17 Score=174.07 Aligned_cols=354 Identities=9% Similarity=0.077 Sum_probs=211.7
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc---ccchh-hhhHHHHHHHHhhhcccc
Q 007862 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFK-TITFASIAAILLAEHFVT 103 (587)
Q Consensus 28 ~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Gr~~-~~~~~~~~~~~~~~~~~~ 103 (587)
.....+..+..+++.|+++++|+|..++|++..+..+...+..|+.|+++||. +|||| .++++.++..+
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i------- 82 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSI------- 82 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHH-------
Confidence 34455566677899999999999999999999999999999999999999972 48866 46667676766
Q ss_pred cccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccccc
Q 007862 104 KYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 183 (587)
Q Consensus 104 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (587)
+.+++......+ .......++..+++.+++.+...+...++..|..++. +
T Consensus 83 -----~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~-----~ 132 (437)
T TIGR00792 83 -----VLVLLFTTPDFS--------------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDP-----R 132 (437)
T ss_pred -----HHHHHHhCCCCC--------------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCH-----H
Confidence 555444332111 0113456677778888888888888888888887542 2
Q ss_pred chhhhhhHHHHHHHHHHHHHhhhhhhcc-------cccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHH
Q 007862 184 GINSFFNWYYTTFTVVILITQTVLVYIQ-------DSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQ 256 (587)
Q Consensus 184 ~r~~~~~~~~~~~~~g~~i~~~~~~~i~-------~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (587)
+|++..++.....++|..+++.+.+.+. +..+|++.|.+.+++.++..++.+...++..++.++++
T Consensus 133 ~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~------- 205 (437)
T TIGR00792 133 ERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNI------- 205 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccc-------
Confidence 4889999988888888877766654443 24689999988777766555444333332110000000
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhh
Q 007862 257 VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVK 336 (587)
Q Consensus 257 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 336 (587)
+ + +.+..+.... -.. .|
T Consensus 206 --------------~----~---------------------~~~~~~~~~~-----------------------l~~-~~ 222 (437)
T TIGR00792 206 --------------E----K---------------------KLSLKQIFKA-----------------------LFK-ND 222 (437)
T ss_pred --------------c----c---------------------CCCHHHHHHH-----------------------HhC-CH
Confidence 0 0 0000000000 000 11
Q ss_pred hhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCC
Q 007862 337 CLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGG 416 (587)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~ 416 (587)
.++..+.........+........++.... ... . ...+.+..+..+..++..++..++ .+|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~-----~~~~~~~~~~~i~~ii~~~~~~~l----~~r~g~---- 286 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYV--LGD-P-----ELFSYMGSIAIVAGLIGVLLFPRL----VKKFGR---- 286 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeee--cCC-h-----HHHHHHHHHHHHHHHHHHHHHHHH----HHHhCc----
Confidence 111111111111111111111112221111 110 0 001223333445555555554444 666643
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCC-------c
Q 007862 417 ITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFP-------D 489 (587)
Q Consensus 417 ~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P-------~ 489 (587)
++.+..+.++.+++.+...+. ..+.+.+....++.+++.+...+..+++..|..| +
T Consensus 287 ---~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (437)
T TIGR00792 287 ---KILFAGGILLMVLGYLIFFFA--------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGV 349 (437)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHc--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCc
Confidence 345666666666665554432 1133444556677888888888888888888765 5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007862 490 HMKSIANSLLFCSFGFASYLSSLLITIVHGVT 521 (587)
Q Consensus 490 ~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~ 521 (587)
+.+|.+.|+.++...+|..+++.+.+.+.+..
T Consensus 350 ~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 350 RAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 56899999999999999999999999887654
No 82
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.77 E-value=3.1e-17 Score=173.24 Aligned_cols=157 Identities=13% Similarity=0.154 Sum_probs=116.0
Q ss_pred HHHHHHHHhhC--CChhhHHHHHHHH--H---HHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceE
Q 007862 39 NFMVYLLKEYH--MNQTSAANILNIW--G---GVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGML 111 (587)
Q Consensus 39 ~~~~yl~~~~~--~s~~~~~~i~~~~--~---~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 111 (587)
+...++.+++. .++++.+.+.+.. . +...+++++.|+++|| +||||++.++.++..+ +.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr-~g~r~~l~~~~~~~~~------------~~~ 80 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDR-IGRKKTLVITLLMMGI------------GTL 80 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhh-hhhHHHHHHHHHHHHH------------HHH
Confidence 45566666654 4455555544432 2 2234678999999999 5999999999999988 777
Q ss_pred EEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhH
Q 007862 112 TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNW 191 (587)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 191 (587)
+.+++.+++.. .......+++.|+++|++.+...+....++.|.+|+++ |++..++
T Consensus 81 ~~~~~~~~~~~------------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 136 (394)
T TIGR00883 81 LIGLLPSYATI------------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSF 136 (394)
T ss_pred HHhhCCChhhh------------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHH
Confidence 76665521100 00012468899999999999999999999999999755 9999999
Q ss_pred HHHHHHHHHHHHhhhhhhcc--------cccchhhHHHHHHHHHHHHHH
Q 007862 192 YYTTFTVVILITQTVLVYIQ--------DSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 192 ~~~~~~~g~~i~~~~~~~i~--------~~~~w~~~f~i~~~~~~~~~~ 232 (587)
......+|..+++.++..+. +.++||+.|.+..+..+++..
T Consensus 137 ~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 137 QQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH
Confidence 99999999999988876553 357899999887766555443
No 83
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.77 E-value=2.7e-18 Score=180.99 Aligned_cols=164 Identities=12% Similarity=0.081 Sum_probs=130.9
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
..+......++.....+...+.++.++++++|+|..+.+++.+++.++..++++++|+++|| +||||++.++.++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~i- 79 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDK-FGPRYTTTLSLLLLAI- 79 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH-
Confidence 34555555556666666666677768999999999999999999999999999999999999 5999999999999999
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.++++++.. +++.++.+|+++|++.+.. +...++++|.+|++
T Consensus 80 -----------~~~~~~~~~~-------------------------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~ 122 (366)
T TIGR00886 80 -----------PCLWAGLAVQ-------------------------SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKK 122 (366)
T ss_pred -----------HHHHHHHHhh-------------------------hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHh
Confidence 7766655430 5677889999999996654 56788999999975
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc----------ccchhhHH-HHHHHH
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD----------SVSWVIGF-GIPTVL 226 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~----------~~~w~~~f-~i~~~~ 226 (587)
+ |+++.+++....++|..+++.+++.+.. ..+||+.| .+..+.
T Consensus 123 ~------r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~ 176 (366)
T TIGR00886 123 I------QGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGI 176 (366)
T ss_pred h------hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence 5 9999999998888888888777766553 34899999 443433
No 84
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.77 E-value=1.5e-17 Score=175.50 Aligned_cols=155 Identities=10% Similarity=0.104 Sum_probs=127.0
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccc
Q 007862 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQG 107 (587)
Q Consensus 28 ~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 107 (587)
++....+.....+.+.+.+++|+|.++.+++.+++.++..++.++.|+++|| +||||+++++.++..+
T Consensus 10 ~~~~~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~----------- 77 (355)
T TIGR00896 10 LNLRPALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARR-FGEERSVAAGLLLIAA----------- 77 (355)
T ss_pred hcccCccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hCchHHHHHHHHHHHH-----------
Confidence 4444444445556667899999999999999999999999999999999999 5999999999988777
Q ss_pred cceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhh
Q 007862 108 KGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 187 (587)
Q Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 187 (587)
+.+.. ... +...+++.|++.|+|.+...+.....+.|.+++ + |++
T Consensus 78 -~~~~~-~~~--------------------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~------~~~ 122 (355)
T TIGR00896 78 -GILIR-SAP--------------------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R------VGL 122 (355)
T ss_pred -HHHHH-Hhc--------------------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h------hhH
Confidence 66544 222 567788999999999999888888888888763 3 899
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhccccc--chhhHHHHHHHHHHH
Q 007862 188 FFNWYYTTFTVVILITQTVLVYIQDSV--SWVIGFGIPTVLMIG 229 (587)
Q Consensus 188 ~~~~~~~~~~~g~~i~~~~~~~i~~~~--~w~~~f~i~~~~~~~ 229 (587)
+++++....++|..+++.+++.+.+.. +||+.|.+.++..++
T Consensus 123 ~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 123 MTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999998887664 399998776554433
No 85
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.77 E-value=5.3e-17 Score=180.09 Aligned_cols=360 Identities=13% Similarity=0.051 Sum_probs=232.3
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.+..+....++.+++...-..-++-++ .++.-|+...+++..+..+-..+..+++|.++|| +.|||+++.+-++..+
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv-~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr-~drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLV-TQLTGSPLMVALVQAASTLPILLLSLFAGALADR-FDRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccchHHHHHHHHHHHH
Confidence 4556666777777777776555555454 4667889999999999999999999999999999 5999999999988766
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
..+.+++.... +..+.+.++..-++.|++.+...|+-.+++.|..|+
T Consensus 88 ------------~~~~L~~l~~~---------------------~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~ 134 (524)
T PF05977_consen 88 ------------VALLLAVLAFF---------------------GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK 134 (524)
T ss_pred ------------HHHHHHHHHHh---------------------CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 44433332210 122678888899999999999999999999999998
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQ 256 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (587)
++ ...+.++..+..|+.-.+||.++|.+....|-.+.|.+.++..++.+.+....++... ++..+.....+
T Consensus 135 ~~------L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~---~~~~~~e~~~~ 205 (524)
T PF05977_consen 135 ED------LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP---PSSLPRERFFS 205 (524)
T ss_pred hh------HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc---ccccchhhhhh
Confidence 65 8899999999999999999999999998889899999988877766554443332211 11000000000
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhh
Q 007862 257 VLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVK 336 (587)
Q Consensus 257 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 336 (587)
+. .+..++. . ..+
T Consensus 206 ----~l---------------------------------~~G~ryv------~------------------------~~~ 218 (524)
T PF05977_consen 206 ----AL---------------------------------REGLRYV------R------------------------SSP 218 (524)
T ss_pred ----hH---------------------------------HHHHHHH------h------------------------cch
Confidence 00 0000000 0 001
Q ss_pred hhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCC
Q 007862 337 CLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGG 416 (587)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~ 416 (587)
.+...+.. ...+........... +.......+ +-....+.+.....++.+++..+..++ .+++
T Consensus 219 ~l~~~l~~---~~~~~l~~~a~~aLl---Pl~a~~~l~-~~a~~yGll~a~~gvGai~Gal~~~~l----~~~~------ 281 (524)
T PF05977_consen 219 PLRSVLLR---SFLFNLFASAVWALL---PLFARDVLG-GGASGYGLLLAAFGVGAILGALLLPRL----RRRL------ 281 (524)
T ss_pred HHHHHHHH---HHHHHHhhhHHHHhh---hHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHHHh----hccc------
Confidence 11111110 111111100000111 111111111 000112333334445555554432222 2222
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHH
Q 007862 417 ITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIAN 496 (587)
Q Consensus 417 ~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~ 496 (587)
+..+.+..+.++.+++++.+++. .+.+...+.+++.|++.........+...+..|+++||+.+
T Consensus 282 -~~~~lv~~~~~~~a~~~~~lal~---------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~ 345 (524)
T PF05977_consen 282 -SSRRLVLLASLLFALALLLLALS---------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVF 345 (524)
T ss_pred -CcchhhHHHHHHHHHHHHHHhcc---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHH
Confidence 33455666777777776666543 34555666778889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 497 SLLFCSFGFASYLSSLLITIVHGV 520 (587)
Q Consensus 497 gl~~~~~~lg~~l~~~l~~~v~~~ 520 (587)
|++.+....+..+|+.+.+.+.+.
T Consensus 346 si~~~~~~g~~~lGsll~G~la~~ 369 (524)
T PF05977_consen 346 SIYQMVFFGGMPLGSLLWGFLADH 369 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988999999888887753
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.73 E-value=2.5e-16 Score=166.05 Aligned_cols=159 Identities=14% Similarity=0.189 Sum_probs=121.4
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc----ccchhhh-hHHHHHHHHhhhccccccccc
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY----IGRFKTI-TFASIAAILLAEHFVTKYQGK 108 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~----~Gr~~~~-~~~~~~~~~~~~~~~~~~~~~ 108 (587)
+++.....+.+.+++|+|.++.++.... .....+ .+++|.++||+ +||||.+ +.+.++..+
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~------------ 69 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLS------------ 69 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHH------------
Confidence 3455666677788999999999999655 344444 88999999994 3999975 556665555
Q ss_pred ceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhh
Q 007862 109 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 188 (587)
Q Consensus 109 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 188 (587)
.++.+++... ..+.+.+....++.+++.+...+...+++.|.+|+++ |+++
T Consensus 70 ~~~~l~~~~~-----------------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~ 120 (356)
T TIGR00901 70 LLLILSFLVP-----------------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYG 120 (356)
T ss_pred HHHHHHcCCc-----------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchH
Confidence 4434433321 1255666667777888888889999999999998754 9999
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcccccc--------hhhHHHHHHHHHHHHHHHHH
Q 007862 189 FNWYYTTFTVVILITQTVLVYIQDSVS--------WVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 189 ~~~~~~~~~~g~~i~~~~~~~i~~~~~--------w~~~f~i~~~~~~~~~~~~~ 235 (587)
.++...+.++|.++++.+++++.+..+ ||..|++.++..+++++..+
T Consensus 121 ~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~ 175 (356)
T TIGR00901 121 STIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTL 175 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888777 99999998887766555444
No 87
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.73 E-value=5.8e-21 Score=207.93 Aligned_cols=138 Identities=13% Similarity=0.178 Sum_probs=117.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCC
Q 007862 53 TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKP 132 (587)
Q Consensus 53 ~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 132 (587)
...+++.++..++..++.+++|+++|| +|||++++++.++..+ |.++.+++...
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~-~GRk~~~~~~~~~~~i------------~~~~~~~~~~~------------- 99 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADR-YGRKPALIISALLMII------------GSILIAFAPSY------------- 99 (451)
T ss_pred HHHHHHHHHHHhhhccccccccccccc-cccccccccccccccc------------ccccccccccc-------------
Confidence 457899999999999999999999999 5999999999999999 99998887621
Q ss_pred CCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc
Q 007862 133 PFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD 212 (587)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~ 212 (587)
.++..+.++|+++|+|.|+..+.+..++.|..|++. |+...++......+|..++..++....+
T Consensus 100 ----------~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 100 ----------NNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred ----------cccccccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccc
Confidence 156779999999999999999999999999999865 9999999999999999988777654433
Q ss_pred ---ccchhhHHHHHHHHHHHHHH
Q 007862 213 ---SVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 213 ---~~~w~~~f~i~~~~~~~~~~ 232 (587)
..+||+.+.++.+..++.++
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~~ 186 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVLL 186 (451)
T ss_pred ccccccccccccccccccccccc
Confidence 34599999887776654443
No 88
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.73 E-value=6.5e-16 Score=167.20 Aligned_cols=158 Identities=15% Similarity=0.106 Sum_probs=131.4
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
+++...+.+.+++++|+|+.+.+++.+.+.++..++.+++|++.|| +||||++.++.+++.+ +.++.
T Consensus 19 ~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r-~G~r~~~~~g~~l~~~------------g~~l~ 85 (410)
T TIGR00885 19 NDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKK-LSYKAGILLGLFLYAL------------GAFLF 85 (410)
T ss_pred HHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH------------HHHHH
Confidence 4566666678899999999999999999999999999999999999 5999999999999999 87664
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
..+.. ..+++.++.+|++.|+|.|...+...+++.+..|+++ |++..++..
T Consensus 86 ~~~~~-----------------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 136 (410)
T TIGR00885 86 WPAAE-----------------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQ 136 (410)
T ss_pred HHHHh-----------------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHH
Confidence 33221 1267889999999999999999999999999888754 888899999
Q ss_pred HHHHHHHHHHhhhhhhcccc--------------------------cchhhHHHHHHHHHHHHHHH
Q 007862 194 TTFTVVILITQTVLVYIQDS--------------------------VSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~~i~~~--------------------------~~w~~~f~i~~~~~~~~~~~ 233 (587)
...++|..++|.+++.+... .+||++|.+.+++.++..++
T Consensus 137 ~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 137 SFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998877422 46999998777655544333
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.72 E-value=2.7e-15 Score=161.47 Aligned_cols=152 Identities=9% Similarity=0.096 Sum_probs=118.6
Q ss_pred hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccc-----cchh-hhhHHHHHHHHhhhcccccccccc
Q 007862 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-----GRFK-TITFASIAAILLAEHFVTKYQGKG 109 (587)
Q Consensus 36 ~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-----Gr~~-~~~~~~~~~~~~~~~~~~~~~~~g 109 (587)
...-+|.|+. +.|+|.++.|++..+... .+..+++|+++|| + |||| .++++.++..+ +
T Consensus 18 ~~~~~~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr-~~~~~~g~rr~~l~~~~~~~~l------------~ 81 (402)
T PRK11902 18 TSGTLQAWMT-VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDR-YTPPLLGRRRGWLLLTQVGLAA------------S 81 (402)
T ss_pred HHHHHHHHHH-HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHc-ccccCCCcchhHHHHHHHHHHH------------H
Confidence 4455666665 569999999999666654 6889999999999 7 8876 67777777766 5
Q ss_pred eEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhh
Q 007862 110 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 189 (587)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 189 (587)
...+++.. +..+.+.++...++.++..+...|...+++.|.+|+++ |+++.
T Consensus 82 ~~~l~~~~-----------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~ 132 (402)
T PRK11902 82 IAAMAFCP-----------------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGA 132 (402)
T ss_pred HHHHHhcC-----------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHH
Confidence 55444432 11256667777677788889999999999999998755 99999
Q ss_pred hHHHHHHHHHHHHHhhhhhhcccc-cchhhHHHHHHHHHHHHHH
Q 007862 190 NWYYTTFTVVILITQTVLVYIQDS-VSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 190 ~~~~~~~~~g~~i~~~~~~~i~~~-~~w~~~f~i~~~~~~~~~~ 232 (587)
++..++.++|..+++.+++++.+. .|||..|++.++..++..+
T Consensus 133 ~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 133 AVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988875 5999999987776655444
No 90
>PRK09848 glucuronide transporter; Provisional
Probab=99.67 E-value=1.7e-14 Score=157.60 Aligned_cols=151 Identities=10% Similarity=0.047 Sum_probs=99.7
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc---ccchhhh-hHHHHHHHHhhh
Q 007862 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTI-TFASIAAILLAE 99 (587)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~-~~~~~~~~~~~~ 99 (587)
..++..++++..+..+++.|+++.+|++..++|.+..+..+...+..++.|+++||. +||||.+ .++.+...+.
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~-- 92 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF-- 92 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH--
Confidence 455566777777778888999999999999999999999999999999999999993 3777755 4454444330
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+.++....... ++......++....+.+++.+...+...++..+..++.+
T Consensus 93 ---------~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~- 142 (448)
T PRK09848 93 ---------SVLVFWVPTDW--------------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ- 142 (448)
T ss_pred ---------HHHHHhCcCCC--------------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-
Confidence 21111111000 011123334555567788888888877887777666522
Q ss_pred ccccchhhhhhHHHHH-----HHHHHHHHhhhhhhc
Q 007862 180 EGVKGINSFFNWYYTT-----FTVVILITQTVLVYI 210 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~-----~~~g~~i~~~~~~~i 210 (587)
+|.+..++..++ .+++..++|.+.+..
T Consensus 143 ----~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 143 ----SRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 366666555443 345666677666544
No 91
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.67 E-value=5.2e-15 Score=161.97 Aligned_cols=435 Identities=11% Similarity=0.003 Sum_probs=242.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhc---cccchhhhhHH-HHHHHHh
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDT---YIGRFKTITFA-SIAAILL 97 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~---~~Gr~~~~~~~-~~~~~~~ 97 (587)
+....+--.+++-...+++++| .+++|.+....+++..+..+...+.+|+.|+++|| .+||||.++++ .+...+
T Consensus 9 ~~~~~~Giq~~~~l~~~~l~~y-l~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~- 86 (477)
T TIGR01301 9 VASVAAGVQFGWALQLSLLTPY-VQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF- 86 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH-
Confidence 3333444455555566666666 47899999999999999999999999999999994 25999999886 444444
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.++++++..+........ ++ .........++.+..+.-++....++...++++|.+|++
T Consensus 87 -----------~l~ll~~~~~~~~~~~~~~-~~--------~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~ 146 (477)
T TIGR01301 87 -----------AVILIGFAADIGHLFGDNL-DK--------KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGD 146 (477)
T ss_pred -----------HHHHHHhCchhhhhccccc-cc--------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCch
Confidence 5455444332110000000 00 001112244555666667788888888899999999986
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhc--ccc-------------cchhhHHHHHHHHHHHHHHHHHhccceee
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYI--QDS-------------VSWVIGFGIPTVLMIGAIILFLVGKKLYV 242 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i--~~~-------------~~w~~~f~i~~~~~~~~~~~~~~~~~~~~ 242 (587)
+ ++++.++++.....++|..+|+.++++. .+. .+.+..|.+.+++.++..++..+..|+++
T Consensus 147 ~----~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 147 A----RRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred h----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 5 3357899999999999999999998865 111 15688999988877777666555444432
Q ss_pred eeCCCCChhhhHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCC
Q 007862 243 LVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVN 322 (587)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 322 (587)
..++++.+.. ...+ .+ + ......+.+..
T Consensus 223 ~~~~~~~~~~---------------~~~~---~~----------~-------~~~~~~~~~i~----------------- 250 (477)
T TIGR01301 223 LIGSDDFINS---------------EAAP---PS----------K-------HGEEAFFGELF----------------- 250 (477)
T ss_pred CCccccchhh---------------hccc---cc----------c-------cchhhhHHHHH-----------------
Confidence 1111100000 0000 00 0 00000000000
Q ss_pred ccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccc-cccCCCccccC---cccccccchhhhhhhhhc
Q 007862 323 QWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKM-NRHLGPKFQIP---PGTVGVISMITIGLWLPF 398 (587)
Q Consensus 323 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~---~~~~~~i~~i~~~l~~~l 398 (587)
+... ..-|.+.+++...++...-|..+..+.+.++-+...- +......++-. ..+....+.+... +
T Consensus 251 --~~~~----~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~----i 320 (477)
T TIGR01301 251 --GAFK----YLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLG----I 320 (477)
T ss_pred --HHHH----HCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHH----H
Confidence 0000 0012233344444444444555444444332211000 00000000000 0111122333333 3
Q ss_pred hhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhh---hcccccCC--Cccee-ehHHHHHHHHHHHHH
Q 007862 399 YDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGR---RASAHLHP--MSQVS-VFWLAPQLILMGFCE 472 (587)
Q Consensus 399 ~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~---~~~~~~~~--~~~~s-~~~li~~~~l~~~ge 472 (587)
.+.++.++.+++++| +..-..+.++.++++....+..... +.....+. ..... .+..++.+.+.|+..
T Consensus 321 ~s~~l~~l~~~~g~~------k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~ 394 (477)
T TIGR01301 321 TSIGMEKLCRGWGAG------KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPL 394 (477)
T ss_pred HHHHHHHHHHHhccc------hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHH
Confidence 333444556666422 1233566667777776665543210 00000000 01111 245666778889999
Q ss_pred HHHhhhhHHHHHhhCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHH
Q 007862 473 AFNIIGQIEFFNKQFPD--HMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLG 550 (587)
Q Consensus 473 ~~~~~~~~~~~~~~~P~--~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~ 550 (587)
+.....-++.+.+..|+ +..|..+|+.|++..+...+.+...+.+....+ ++....+.+.++..
T Consensus 395 A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g--------------~~~~~~~~~~gv~~ 460 (477)
T TIGR01301 395 AITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG--------------GGNLPAFVVGAVAA 460 (477)
T ss_pred HHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC--------------CCCeeHHHHHHHHH
Confidence 99999999999999995 455999999999999999998877666443221 12235667777777
Q ss_pred HHHHHHHHHHHhhh
Q 007862 551 GLNIVYFLYCARRY 564 (587)
Q Consensus 551 ~l~~v~~~~~~~~~ 564 (587)
+++.+..++..++.
T Consensus 461 ~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 461 FVSGLLALILLPRP 474 (477)
T ss_pred HHHHHHHHHhCCCC
Confidence 78877777666654
No 92
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.67 E-value=2.7e-14 Score=157.17 Aligned_cols=176 Identities=10% Similarity=-0.010 Sum_probs=134.5
Q ss_pred CCCccchhHHHH-HHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcccc-----chhh
Q 007862 13 PGGWKAMPYILG-NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG-----RFKT 86 (587)
Q Consensus 13 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G-----r~~~ 86 (587)
..+++..+.++. ..+.+.+. +.+...+..++.+++|+|.++.+...+...+...+-++ +|.++|| ++ ||+.
T Consensus 21 ~~~~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~-~~i~G~rRr~~ 97 (468)
T TIGR00788 21 SFHPRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDT-FPLFGYTKRWY 97 (468)
T ss_pred cCCcchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHh-cCCCCccchHH
Confidence 344555544444 55666666 66777788888889999999999999999888888766 9999999 58 7887
Q ss_pred hhHHHHHH-HHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccc
Q 007862 87 ITFASIAA-ILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPC 165 (587)
Q Consensus 87 ~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 165 (587)
+.++.++. .+ +...++...+ +.....+.+++.+++.+....+
T Consensus 98 l~~~~~l~~~~------------~~~~l~~~~~-------------------------~~~~~~~~~~l~~~~~a~~dv~ 140 (468)
T TIGR00788 98 LVLSGLLGSAI------------LYGLLPGKVS-------------------------SAKVAAAFIFLAALAKALYDVL 140 (468)
T ss_pred HHHHHHHHHHH------------HHHhcccccc-------------------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 78877766 34 4333332221 2334445788999999999999
Q ss_pred ccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 007862 166 SIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~ 232 (587)
.-++..|..+ +++ +.++...++.|...++|..+++.++|++.+..+|+..|++.+.+.++...
T Consensus 141 ~da~~~e~~~-~~~---~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~ 203 (468)
T TIGR00788 141 VDSLYSERIR-ESP---SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF 203 (468)
T ss_pred HHHHHhhhhh-cCC---CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH
Confidence 9999999998 321 44667788888889999999999999999999999999988777666643
No 93
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=1.1e-14 Score=162.24 Aligned_cols=141 Identities=13% Similarity=0.006 Sum_probs=127.0
Q ss_pred HHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCC
Q 007862 45 LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHP 124 (587)
Q Consensus 45 ~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 124 (587)
.+.++.+.....+..+++.++..+++++.|+++|| +|||+++++++++.++ +.+..+++.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i------------~~~~~a~a~------- 169 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFII------------FGILTAFAP------- 169 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHH------------HHHHHHHhC-------
Confidence 35677889999999999999999999999999999 6999999999999999 777777766
Q ss_pred CCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHh
Q 007862 125 PKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQ 204 (587)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~ 204 (587)
++..+++.|++.|++.++...+...+++|.+++++ |+.+.++ +.....++.+++
T Consensus 170 -------------------~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~ 223 (521)
T KOG0255|consen 170 -------------------NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLP 223 (521)
T ss_pred -------------------cHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHH
Confidence 88999999999999999999999999999999866 9999999 888888888899
Q ss_pred hhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 205 TVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 205 ~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
.+++++.. +||+.+++..+..++.++.
T Consensus 224 ~~~a~~~~--~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 224 AGAAYITR--DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHh--hHHHHHHHHHHHHHHHHHH
Confidence 99999887 8999999988777766555
No 94
>PRK09669 putative symporter YagG; Provisional
Probab=99.65 E-value=2.4e-14 Score=156.32 Aligned_cols=184 Identities=11% Similarity=0.031 Sum_probs=122.2
Q ss_pred CccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc---ccchhhhh-HH
Q 007862 15 GWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTIT-FA 90 (587)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~~-~~ 90 (587)
++|+.+.=-...+..+..+..+..+++.|+++++|+|..++|.+..+.-+.-.+..|+.|+++||. +||||..+ ++
T Consensus 7 ~~~~~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~ 86 (444)
T PRK09669 7 TTKDKIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWF 86 (444)
T ss_pred cHHHHHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHH
Confidence 344333222334555666666778899999999999999999999999999999999999999992 38866555 55
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
.+...+ +..++......+ .......+++..++.+++..+......++.
T Consensus 87 ~~~~~i------------~~~l~f~~p~~~--------------------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~ 134 (444)
T PRK09669 87 AIPFGV------------VCLLTFYTPDFG--------------------ATGKIIYACVTYILLSLVYTAINVPYCAMP 134 (444)
T ss_pred HHHHHH------------HHHHHHhCCCCC--------------------cchHHHHHHHHHHHHHHHHHhhcchHHHhH
Confidence 555555 433222211100 112344555555666766667777777888
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-------ccchhhHHHHHHHHHHHHHHHHH
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-------SVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-------~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
+|..++. ++|.+..++.....++|..+++.+...+.. ..+|+..+.+.+++.++..+..+
T Consensus 135 ~~~t~~~-----~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 135 GAITNDP-----RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred HHhcCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9987542 238888888888888888887765433321 34688777776665555444333
No 95
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.65 E-value=3.1e-14 Score=156.83 Aligned_cols=172 Identities=8% Similarity=-0.016 Sum_probs=116.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhh----ccccchhhh-hHHHHHHHHhh
Q 007862 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISD----TYIGRFKTI-TFASIAAILLA 98 (587)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD----~~~Gr~~~~-~~~~~~~~~~~ 98 (587)
...+..++.+..+..+++.|+++.+|+|...+|.+..+.-+.-.+..|+.|+++| | +||||.. +++.+...+
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr-~Grrrp~il~g~i~~~i-- 89 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSR-WGKFKPWILIGTLANSV-- 89 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCC-CCCcchhHhhhhHHHHH--
Confidence 3345556667777788999999999999999999999999999999999999999 6 5995554 456666566
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+..++...... ++......+++.-++.+++.........++..|..++.
T Consensus 90 ----------~~~llf~~p~~--------------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~- 138 (473)
T PRK10429 90 ----------VLFLLFSAHLF--------------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDK- 138 (473)
T ss_pred ----------HHHHHHcCCCC--------------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCH-
Confidence 44333221110 01112344455556677888888888889999988542
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhcc-------cccchhhHHHHHHHHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ-------DSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~-------~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
++|.+.+++.....++|+.+.+.+...+. +..+|++...+.+++.++....
T Consensus 139 ----~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 139 ----REREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 23888888877777887666655543321 1235666665555554444333
No 96
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.65 E-value=5.3e-14 Score=156.56 Aligned_cols=152 Identities=13% Similarity=0.149 Sum_probs=122.8
Q ss_pred HHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeec
Q 007862 38 ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTA 117 (587)
Q Consensus 38 ~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 117 (587)
.....++.+++|-+ ....|+...+.+...+..++.|.++|. +|||..++++.++.++ |++..+-+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDl-fGRr~~~i~g~~l~vv------------G~Iv~atA~ 129 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDL-FGRRYFFIIGSLLGVV------------GSIVCATAQ 129 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHH-hcchHHHHHHHHHHHh------------HHHHhhcCC
Confidence 56678999999976 566789999999999999999999999 6999999999999999 999988776
Q ss_pred cCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHH
Q 007862 118 WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFT 197 (587)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 197 (587)
+...++.+-.+.|+|.|.... ....++|..|.+. |..+..+.....-
T Consensus 130 --------------------------~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~------R~~~~~~~~~~~i 176 (599)
T PF06609_consen 130 --------------------------NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKW------RGLGLAIASIPFI 176 (599)
T ss_pred --------------------------cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccch------hhhHhHHHHHHHH
Confidence 667799999999999887764 5556899998744 7776666665554
Q ss_pred HHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 198 VVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 198 ~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+...+++.++..+....+|||.|++..+...+++++.++
T Consensus 177 ~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 177 ITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred hhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 555566777766666679999999988877766655433
No 97
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.63 E-value=9.3e-16 Score=161.50 Aligned_cols=403 Identities=15% Similarity=0.045 Sum_probs=218.9
Q ss_pred CChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCC
Q 007862 50 MNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDV 129 (587)
Q Consensus 50 ~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 129 (587)
++....+.+.++..++..+++++.||++|+ +|||+++...++++++ +++.++++..
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~-~GRK~vYG~~liImIi------------~t~~~~~s~~----------- 136 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDK-FGRKKVYGKELIIMII------------CSALSGLSVG----------- 136 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hcchhhhhHHHHHHHH------------HHHHhccCCC-----------
Confidence 567788899999999999999999999999 5999999999999999 8886666442
Q ss_pred CCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhh--
Q 007862 130 AKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL-- 207 (587)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~-- 207 (587)
.+++..-...+...|.++|+|.|+-+|++.+..+|..-.. +||...++.......|...|.++.
T Consensus 137 --------~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~------~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 137 --------TTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKK------TRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred --------CCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhc------cccceeEEEEEecchhHhhccHHHHH
Confidence 1222234567899999999999999999999999988764 488877776655555555444433
Q ss_pred --hhccc-----------ccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhh-HHHHHHHHHHhccccCCCCC
Q 007862 208 --VYIQD-----------SVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSG-IGQVLVAAYKKRRLTLPQGQ 273 (587)
Q Consensus 208 --~~i~~-----------~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~ 273 (587)
...-. ..=||..|.+.++..++.+..-+.. |+...... +.+-..++.+..++....
T Consensus 203 v~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M--------~Et~~Y~al~~~~~~~a~~d~~k~~~~-- 272 (538)
T KOG0252|consen 203 VSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKM--------PETARYTALVSKKLKQAAGDMKKVLSV-- 272 (538)
T ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcC--------CcchhHHHHhhcCHhhhhhcccccccc--
Confidence 22211 1239999998877655443321111 11111110 000000000000000000
Q ss_pred CCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhhhhHHHHHHHHHHh
Q 007862 274 MDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLT 353 (587)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (587)
+ +... .+...+..+...|..+.... . ..++-..++. ....|.
T Consensus 273 ------------------------~--------~~~~-~~~~~~~~~~~~~~~~F~~~---f-~~~hg~~Llg-t~~~WF 314 (538)
T KOG0252|consen 273 ------------------------D--------IEAE-STAESDVPPPSNSFGLFSRL---F-LRWHGKHLLG-TAGTWF 314 (538)
T ss_pred ------------------------c--------cchh-hccccCCCCcccccchHHHH---H-HHHHHHHHHH-HHHHHH
Confidence 0 0000 00000000111111100000 0 0001111111 122222
Q ss_pred hh-ccccceeeeeeccccccCCCccccCcc-cc------cccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHH
Q 007862 354 SI-SQQGTFTVSQAMKMNRHLGPKFQIPPG-TV------GVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGI 425 (587)
Q Consensus 354 ~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~------~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~ 425 (587)
.+ .-.++..+.|..-.+. .+ + +|.. .. .-.+.+.........-++...+.|+.+| .+.-+.
T Consensus 315 llDiafy~~nL~~s~I~~~-ig--~-~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGR-------k~iq~~ 383 (538)
T KOG0252|consen 315 LLDIAFYGQNLFQSVIFSA-IG--V-IPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGR-------KYIQLM 383 (538)
T ss_pred hhhhhhhccccHHHHHHHh-hc--c-CCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhh-------HHHHHh
Confidence 21 1112222222111110 10 0 1110 00 0112222222222222333334555543 356777
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCCcceeehH-HHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHH
Q 007862 426 GMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFW-LAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFG 504 (587)
Q Consensus 426 G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~-li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 504 (587)
|++++.+-++..+..-+. ..+... .+.-.+.+-+++-.-..+.-.+..|.+|.+.||+.-|++-.+.-
T Consensus 384 GF~~~~i~~~~~~~~y~~-----------~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK 452 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQ-----------LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGK 452 (538)
T ss_pred hHHHHHHHHHHHcCCccc-----------ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhcc
Confidence 888887777766643220 011111 22222334456666666677788999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccccCccc
Q 007862 505 FASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGIQS 572 (587)
Q Consensus 505 lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~~~~~~~ 572 (587)
+|..++........+. + +....+..+.|+++++++++++++.+++. |+++++.|+.
T Consensus 453 ~GAivg~~~F~~~t~~-------~----yp~~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei 508 (538)
T KOG0252|consen 453 AGAIVGAFGFLYLTDH-------N----YPPNIGVRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEI 508 (538)
T ss_pred chHHHHHHHhhHhhhc-------c----CCccccchHHHHHHHHHHHHhHheeEEee-cccccCHHHh
Confidence 9999998766554431 1 11123566789999999999998887664 8888887765
No 98
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=1.6e-14 Score=159.70 Aligned_cols=419 Identities=15% Similarity=0.092 Sum_probs=255.2
Q ss_pred hHHHHHHHHHHHHhhhhHH---HHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 20 PYILGNETFERLATIGLLA---NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~---~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.+.+..++.++.++++.. .+-..++++++.+..+++|+.++......++.|+.+.+.|| +|.|.+.+.+.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~r-fg~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNR-FGCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhh-cCchHHHHHHHHHHHH
Confidence 6667777777777766544 34566889999999999999999999999999999999999 5999999999999999
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHH-HHHHHHHhccccccccccccccccCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLV-MGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
|+++..++. +.+.++ ..=++.|+|.|.++..+...+..+|+
T Consensus 124 ------------g~~lssF~~--------------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~ 165 (509)
T KOG2504|consen 124 ------------GLLLSSFAT--------------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE 165 (509)
T ss_pred ------------HHHHHHHHh--------------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhH
Confidence 999888877 454444 44466789999999999999998888
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIG 255 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (587)
|+|+.+.++...+..+|..+-|.+.-++.+.+|||+.+++-..+.+-.++.....++......+.+ .
T Consensus 166 -------kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~--~---- 232 (509)
T KOG2504|consen 166 -------KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNE--E---- 232 (509)
T ss_pred -------HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchh--h----
Confidence 469999999999999999999999999999999999999877666555554444444222211110 0
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccce-----
Q 007862 256 QVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQ----- 330 (587)
Q Consensus 256 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~----- 330 (587)
...++.....+. . ..+..........+..+ ....+.....+ ....|+....+
T Consensus 233 ----~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 289 (509)
T KOG2504|consen 233 ----KDLRNSAASVES---T-----PKPVELRISERDSGLKK-LSLSNLATLKR----------GPDKWRNSPLQAFLSM 289 (509)
T ss_pred ----hhhccccccccc---c-----ccccccccccCCCCCCc-ccccchhhhhh----------CCccccccchhhhhhh
Confidence 000000000000 0 00000000000000000 00000000000 00011100000
Q ss_pred ----eeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHH
Q 007862 331 ----QVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPA 406 (587)
Q Consensus 331 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l 406 (587)
...+...+...+...+....+...+...+.+.. ....+.. ..+....+..+..+++.+....+
T Consensus 290 ~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~--~~g~~~~-------~aa~l~Siigi~~i~gRi~~G~l---- 356 (509)
T KOG2504|consen 290 LDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK--SLGLSSN-------DAAFLLSIIGVSDIIGRIILGLL---- 356 (509)
T ss_pred hhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCChh-------hhHHHHHHHHHhhhhhhhhhhhh----
Confidence 001111111111111111111111111111111 1111111 11233334444445555544444
Q ss_pred hhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhh
Q 007862 407 LRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQ 486 (587)
Q Consensus 407 ~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~ 486 (587)
.++.. ++.......++++.+++.++..+. .+++.++...++++++.+...........+.
T Consensus 357 aD~~~-----~~~~~~~~~~ll~~gl~~~~~p~~---------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~ 416 (509)
T KOG2504|consen 357 ADKPG-----IRALVLFLLTLLIAGLARLFLPFA---------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDL 416 (509)
T ss_pred cCccc-----cchHHHHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44421 244555666666666666444432 4566677777889999999988888999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007862 487 FPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 561 (587)
Q Consensus 487 ~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~ 561 (587)
.+.+.-+.+.|+..+.+.++..+++.+.+.+.+.+ ++|+..|...++..+++.+..++..
T Consensus 417 ~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~t---------------g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 417 VGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDIT---------------GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cChhhcchHHHHHHHHhHHHHHcCcccceeeeecc---------------CCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999999999999888777654 2467778888888888887766655
No 99
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.62 E-value=4.1e-15 Score=169.26 Aligned_cols=204 Identities=15% Similarity=0.159 Sum_probs=153.3
Q ss_pred CCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHH
Q 007862 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 93 (587)
..||.+...+....+....+.+......+.+.++++++.++.|++.+.+.++..++.++.|+++|| +||||.+.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r-~~r~~~i~~g~ll 107 (633)
T TIGR00805 29 SKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTK-LHRPIVIGIGCAI 107 (633)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcc-cCcceEEEecHHH
Confidence 445555555555666666667777778888999999999999999999999999999999999999 5999999999999
Q ss_pred HHHhhhcccccccccceEEEeeeccCCCCCCCC------C-CCCCCCCC----------------cccCCc--chhHHHH
Q 007862 94 AILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPK------C-DVAKPPFG----------------QCKSAN--SMQLGVL 148 (587)
Q Consensus 94 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~-~~~~~~~~----------------~~~~~~--~~~~~~~ 148 (587)
+.+ |.++.++..++..-+... . .+...+.. .|.... +..+..+
T Consensus 108 ~~l------------g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (633)
T TIGR00805 108 MGL------------GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLF 175 (633)
T ss_pred HHH------------HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhh
Confidence 999 887777654321111000 0 00000011 111111 2246678
Q ss_pred HHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccccc--------------
Q 007862 149 VMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-------------- 214 (587)
Q Consensus 149 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-------------- 214 (587)
+++|+++|+|.+...+...+++.|.+|+++ |+..+++++....+|.++|+++++++.+.+
T Consensus 176 ~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~ 249 (633)
T TIGR00805 176 LVSQLLRGIGATPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILT 249 (633)
T ss_pred HHHHHHHhccCCcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCC
Confidence 899999999999999999999999999865 999999999999999999999999887532
Q ss_pred --------chhhHHHHHHHHHHHHHHHHHh
Q 007862 215 --------SWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 215 --------~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+|+..|++.+++.++..+.+++
T Consensus 250 ~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 250 PTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3777888877766665544444
No 100
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.62 E-value=9.1e-15 Score=150.90 Aligned_cols=118 Identities=16% Similarity=0.099 Sum_probs=105.4
Q ss_pred CCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCC
Q 007862 49 HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCD 128 (587)
Q Consensus 49 ~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 128 (587)
+.+..-+|.+-+.|++...+.++++|.+|||| |||.++++|++...+ ..++.+.+.
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~------------s~ll~~~S~----------- 119 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVAL------------SYLLWALSR----------- 119 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHH------------HHHHHHHHH-----------
Confidence 34557789999999999999999999999996 999999999999888 877777766
Q ss_pred CCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhh
Q 007862 129 VAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 208 (587)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 208 (587)
++..++++|++.|+.-|-..+ +.++++|.+++++ |+.+++...+...+|..+||.++|
T Consensus 120 ---------------~F~afv~aR~l~Gi~kgnl~v-~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGg 177 (451)
T KOG2615|consen 120 ---------------NFAAFVLARFLGGIFKGNLSV-IRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGG 177 (451)
T ss_pred ---------------HHHHHHHHHHhhhhccCchHH-HHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhh
Confidence 677788889999999887655 7889999999855 999999999999999999999999
Q ss_pred hccc
Q 007862 209 YIQD 212 (587)
Q Consensus 209 ~i~~ 212 (587)
|+..
T Consensus 178 yla~ 181 (451)
T KOG2615|consen 178 YLAQ 181 (451)
T ss_pred HHHh
Confidence 9987
No 101
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.61 E-value=2e-13 Score=146.19 Aligned_cols=171 Identities=11% Similarity=-0.022 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHH--HHHHHHHHHHHhhhh-HHHhhccccchhhhhHHHHHH-H--
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANI--LNIWGGVTNFAPLLG-AFISDTYIGRFKTITFASIAA-I-- 95 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i--~~~~~~~~~~~~~~~-G~laD~~~Gr~~~~~~~~~~~-~-- 95 (587)
+....+.+.+.+....+.+|.|+ ++.|.|.++.|.. .........+.+|+. ++.+|| .||||..++.+.+. .
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l-~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~-~g~r~~~i~~~~~~~~~~ 83 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLL-REDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWR-LGRRRSWVLPMQCLVSAC 83 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-CCcchhHHHHHHHHHHHH
Confidence 34444455555454556666665 5679999999997 355566666666666 668999 59999975555321 1
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+. +........ .....++....+.++..+...+....+..|..+
T Consensus 84 ~~-----------~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~ 127 (390)
T TIGR02718 84 LA-----------SLALVGPDV-------------------------AGAGWAVGLLACASLASATQDIATDGMAAEHFN 127 (390)
T ss_pred HH-----------HHHcCCcch-------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 10 111111111 012223344444555666666666666666555
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
++ +++.+.+...++..+|..+|+.+.+++.+..|||..|++.+++.++..+..++
T Consensus 128 ~~------~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 128 GR------TLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred Hh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 42 36667777777779999999998889999999999999988777665555444
No 102
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=1.5e-14 Score=150.06 Aligned_cols=149 Identities=11% Similarity=0.053 Sum_probs=136.8
Q ss_pred HhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCC
Q 007862 46 KEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPP 125 (587)
Q Consensus 46 ~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 125 (587)
++.+.++++.|++.++..+...+..++.|.+.|| +|+|-.++++++.+.+ ++++.++..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~------------sTilFafg~-------- 157 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFL------------STILFAFGN-------- 157 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHH------------HHHHHHHcc--------
Confidence 3567789999999999999999999999999999 7999999999999999 999999877
Q ss_pred CCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhh
Q 007862 126 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 205 (587)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~ 205 (587)
++++++++|.+||+|.++...+..++++|.||++. +|++++++.-.+..+|-.+||.
T Consensus 158 ------------------sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPp 214 (464)
T KOG3764|consen 158 ------------------SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPP 214 (464)
T ss_pred ------------------hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCC
Confidence 77889999999999999999999999999999865 4899999999999999999999
Q ss_pred hhhhcccccchhhHHHHHHHHHHHHHHHHHhcc
Q 007862 206 VLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGK 238 (587)
Q Consensus 206 ~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 238 (587)
++|.+-+..|.+.+|++.++++++...+.++..
T Consensus 215 fGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 215 FGGILYEFAGKSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred cccchHhhcCCcCcHHHHHHHHHHHHHHHHhee
Confidence 999999999999999998888887777655443
No 103
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.59 E-value=9.2e-14 Score=149.61 Aligned_cols=156 Identities=9% Similarity=0.045 Sum_probs=136.6
Q ss_pred hhHHHHHHHHHHhhCCChhh-HHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 35 GLLANFMVYLLKEYHMNQTS-AANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 35 ~~~~~~~~yl~~~~~~s~~~-~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
...++..+|+.+++|+|+++ .|.+..+|..++.++.+++|+++|| +|-|+++.++.+.+.+ ..+++
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDr-lG~K~vL~l~~l~Wsl------------~t~L~ 109 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDY-LRYKPVLVLQALSFVC------------VWLLL 109 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHHH------------HHHHH
Confidence 34566778999999999999 9999999999999999999999999 6999999999999999 88887
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
+++. ++..+.+.|++.|+++|+.. +...++..++|+++ |+++.++..
T Consensus 110 ~fa~--------------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~ 156 (511)
T TIGR00806 110 LLGT--------------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSR 156 (511)
T ss_pred HHHH--------------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHH
Confidence 7765 67889999999999999999 99999999999865 999999999
Q ss_pred HHHHHHHHHHhhhhhhcccccchhhHH---HHHHHHHHHHHHHHHhc
Q 007862 194 TTFTVVILITQTVLVYIQDSVSWVIGF---GIPTVLMIGAIILFLVG 237 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~~i~~~~~w~~~f---~i~~~~~~~~~~~~~~~ 237 (587)
.+.++|.++++.++++ ..++|||+-+ .|+.....+++++.++.
T Consensus 157 sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~L 202 (511)
T TIGR00806 157 AAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFL 202 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999 4568998644 45566666666655543
No 104
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.57 E-value=3.2e-13 Score=141.12 Aligned_cols=159 Identities=13% Similarity=0.064 Sum_probs=129.0
Q ss_pred cCCCCccchhHHHHHHHHHHHHh-hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhH
Q 007862 11 KKPGGWKAMPYILGNETFERLAT-IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITF 89 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 89 (587)
...++.|. ..+++..+|--.++ ....-.+.+.+++.+++|..|++++..++..++.+++++.|++.+| +|+|+.++.
T Consensus 6 ~~~~~~~~-~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk-~gyk~gi~l 83 (422)
T COG0738 6 SSSKSVKL-AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKK-LGYKAGIVL 83 (422)
T ss_pred cccCCcee-HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHH-hhhHHHHHH
Confidence 33334443 34444444444444 5566678889999999999999999999999999999999999999 599999999
Q ss_pred HHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccc
Q 007862 90 ASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPF 169 (587)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 169 (587)
++.++++ |..+..=++ +..++..++.+.++.+.|.|..+....++
T Consensus 84 gL~l~av------------g~~lF~pAa-----------------------~~~~y~~FL~~lFila~Gi~~LetaaNp~ 128 (422)
T COG0738 84 GLLLYAV------------GAALFWPAA-----------------------SSKSYGFFLVALFILASGIGLLETAANPY 128 (422)
T ss_pred HHHHHHH------------HHHHHhhhh-----------------------hhhhHHHHHHHHHHHHhhhHHHHhccchH
Confidence 9999999 877654333 23478999999999999999999999999
Q ss_pred ccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc
Q 007862 170 GVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD 212 (587)
Q Consensus 170 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~ 212 (587)
++...++++ -.+=++.......+|+.++|.+++++..
T Consensus 129 v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp~~g~~lil 165 (422)
T COG0738 129 VTLLGKPES------AAFRLNLAQAFNGLGAILGPLLGSSLIL 165 (422)
T ss_pred HHHhCCchh------HHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 999999744 4455677777889999999999998876
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.57 E-value=1.4e-13 Score=149.58 Aligned_cols=357 Identities=9% Similarity=0.021 Sum_probs=218.3
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhh----ccccchhhhh-HHHHHHHHhhhcc
Q 007862 27 TFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISD----TYIGRFKTIT-FASIAAILLAEHF 101 (587)
Q Consensus 27 ~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD----~~~Gr~~~~~-~~~~~~~~~~~~~ 101 (587)
+.....+.....+++.|+++.+|+++..++.+..+.-+.-.+..|+.|+++| | +||||..+ ++.++..+
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~----- 84 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLAL----- 84 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHH-----
Confidence 4444555556678899999999999999999999999999999999999999 7 69888776 46666777
Q ss_pred cccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccc
Q 007862 102 VTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 181 (587)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 181 (587)
+..++.... |. +.........+.+..++..++.........+++.|..++.+
T Consensus 85 -------~~~llf~~~--p~----------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~--- 136 (428)
T PF13347_consen 85 -------SFFLLFSPP--PA----------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD--- 136 (428)
T ss_pred -------HHHHhhccc--cc----------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh---
Confidence 666555431 00 00011123344666666789999999999999999988643
Q ss_pred ccchhhhhhHHHHHHHHHHHHHhhhhhhccccc-------chhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhH
Q 007862 182 VKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-------SWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGI 254 (587)
Q Consensus 182 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-------~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (587)
+|.+..++.....++|..+...+.+.+.+.. +|++...+.+++.++..++.....|+...+.+++++.
T Consensus 137 --~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~--- 211 (428)
T PF13347_consen 137 --ERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKK--- 211 (428)
T ss_pred --hhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccc---
Confidence 3888888888888888876666655554321 6888877776666655555444444310000000000
Q ss_pred HHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeeh
Q 007862 255 GQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEE 334 (587)
Q Consensus 255 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 334 (587)
.++++...+-..+
T Consensus 212 -------------------------------------------------------------------~~~~~~~~~~~~n 224 (428)
T PF13347_consen 212 -------------------------------------------------------------------ISLRDSLRSLFRN 224 (428)
T ss_pred -------------------------------------------------------------------cccccchhhhccc
Confidence 0000000000001
Q ss_pred hhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCC
Q 007862 335 VKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHE 414 (587)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~ 414 (587)
|.+...+.........+........++... .+... -..+.+..+..+..++..++..++ .+|+++|
T Consensus 225 -r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~--vl~~~------~~~~~~~~~~~~~~~v~~~~~~~l----~~r~gk~- 290 (428)
T PF13347_consen 225 -RPFRILLLAFFLQWLAFALMNTFLPYYFTY--VLGNE------GLISIFMLIFFVASIVGSPLWGRL----SKRFGKK- 290 (428)
T ss_pred -chHHHHHHHHHHHHhhhhhhhhHHHHHHHH--HhcCc------hhhHHHHHHHHHHHHHHHHHHHHH----HHHccce-
Confidence 111111111111111111111111111100 01100 012233334455555566654444 7777554
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCc-----
Q 007862 415 GGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD----- 489 (587)
Q Consensus 415 ~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~----- 489 (587)
+.+..+.++.+++.++..+.. ..+.+++.+..++.+++.+......+++..|..+.
T Consensus 291 ------~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~t 351 (428)
T PF13347_consen 291 ------KVYIIGLLLAALGFLLLFFLG-------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKT 351 (428)
T ss_pred ------eehhhhHHHHHHHHHHHHHHH-------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhc
Confidence 456677777777776665542 14667788888899999999999999988888874
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007862 490 --HMKSIANSLLFCSFGFASYLSSLLITIVHGVTA 522 (587)
Q Consensus 490 --~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~ 522 (587)
+..|...|++++...++..+++.+.+.+....+
T Consensus 352 g~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 352 GRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred CCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 446899999999999999999998888776543
No 106
>PTZ00207 hypothetical protein; Provisional
Probab=99.56 E-value=1.3e-12 Score=146.08 Aligned_cols=177 Identities=15% Similarity=0.054 Sum_probs=128.9
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
.++|..+.....+..+... .|+.. .....+++++|+|+++.+++.++.. ...++.+++|+++|| +|||++++++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~-~y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr-~G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSF-MYAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDY-LGPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHH-hCcHHHHHHHHH
Confidence 4455444444444433322 23333 3445789999999999999988744 445677789999999 599999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
++.+ |+++++++..- . -..+.+.+++.|++.|+|.+...+....++.+
T Consensus 100 l~~i------------G~ll~ala~~~-~-------------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~ 147 (591)
T PTZ00207 100 VFCL------------GTLLFALTFQE-V-------------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLS 147 (591)
T ss_pred HHHH------------HHHHHHHHhcc-c-------------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 99887775210 0 00167889999999999999999999999999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHH-HhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILI-TQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i-~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
+||+ +|+++.++.....++|+++ +++..+++.+ +|+..|++.+++.++..++.
T Consensus 148 ~Fp~-------~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 148 VFPS-------NRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred hChh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHH
Confidence 9973 3899999999999999975 6666666553 57777776666555544443
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.54 E-value=1.6e-12 Score=140.20 Aligned_cols=382 Identities=11% Similarity=0.096 Sum_probs=204.1
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
.++....+++.+++-...++++.|+++ .|+|..|.|.+.++..+...+++++.|+++||+..+||.+.++.++..+
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~--- 80 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL--- 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH---
Confidence 445556666666666677888888764 7799999999999999999999999999999964567777776666555
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
..+...... +++.++...++..+......|...++..+...+
T Consensus 81 ---------~~~~~~~~~--------------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--- 122 (400)
T PF03825_consen 81 ---------ALLLLAFSS--------------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--- 122 (400)
T ss_pred ---------HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc---
Confidence 433333322 445566666667777777777777777766653
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhh-hhhccccc---chhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHH
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTV-LVYIQDSV---SWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIG 255 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~-~~~i~~~~---~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (587)
++.-++-...-.++|..++... ++.+.... +..+.+++.+...++.....+. .|+.+.++..+.+.+
T Consensus 123 -----~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~--- 193 (400)
T PF03825_consen 123 -----RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAKESVK--- 193 (400)
T ss_pred -----ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccCCCcc---
Confidence 2333333343444444444322 12222111 2234555554433322222222 121110000000000
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehh
Q 007862 256 QVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEV 335 (587)
Q Consensus 256 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 335 (587)
+ ....+. |+.. .+.
T Consensus 194 ---------------~---------------------------~~~~~~-------------------~~ll-----k~~ 207 (400)
T PF03825_consen 194 ---------------K---------------------------LLGLDA-------------------LKLL-----KNP 207 (400)
T ss_pred ---------------c---------------------------ccchHH-------------------HHHh-----cCc
Confidence 0 000000 0000 001
Q ss_pred hhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccc-cCcccccccchhhhhhhhhchhhhhHHHhhhhhcCC
Q 007862 336 KCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQ-IPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHE 414 (587)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~ 414 (587)
+.+.-.+..+..+......+.....++ +... +.. ...+....+..+.-++...+.+++ .+|+
T Consensus 208 ~~~~Fll~~~l~~~~~~~~~~f~~~yl-------~~~g--g~~~~~~g~~~~l~~~aEi~~f~~~~~~----~~r~---- 270 (400)
T PF03825_consen 208 RFLVFLLAAFLIGISHAAYYTFFSIYL-------QELG--GYSGSTIGILWALGVVAEIPFFFFSGRF----LKRF---- 270 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHcc--cchhhHHHHHHHHHHHHHHHHHHHHHHH----HHhc----
Confidence 111111111111111111111111111 1111 000 112223334444444554443333 5554
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHH----HHHHHHHHHHHHHHhhhhHHHHHhhCCch
Q 007862 415 GGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWL----APQLILMGFCEAFNIIGQIEFFNKQFPDH 490 (587)
Q Consensus 415 ~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~l----i~~~~l~~~ge~~~~~~~~~~~~~~~P~~ 490 (587)
+..+.+..+.+..++=+.++.... .+.++. .++.++.|+..++...+...|+.+.+|++
T Consensus 271 ---g~~~ll~~a~~~~~vR~~l~a~~~--------------~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~ 333 (400)
T PF03825_consen 271 ---GIKWLLLLALVAYAVRWLLYAYFS--------------DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE 333 (400)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHhc--------------CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc
Confidence 555677777777666666665431 122222 22234689999999999999999999999
Q ss_pred hhHHHHHHHHH-HHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007862 491 MKSIANSLLFC-SFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCAR 562 (587)
Q Consensus 491 ~rg~~~gl~~~-~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~ 562 (587)
.|+++.++++. ..++|..++..+.+.+.+....+.. -.+...+.+.+++.++..+.+++..|
T Consensus 334 ~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~----------~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 334 LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM----------FDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh----------hhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999998875 5789999999999998864311110 01233445556656666665555543
No 108
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.52 E-value=9.6e-13 Score=135.19 Aligned_cols=198 Identities=15% Similarity=0.094 Sum_probs=140.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccc
Q 007862 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVT 103 (587)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~ 103 (587)
+...++....-.......+-+...+|++.-+..++......++.+++..+|.++|+ +||||.+.+.....++
T Consensus 84 g~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~-~grr~~f~~T~l~t~v------- 155 (528)
T KOG0253|consen 84 GMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADT-IGRRKGFNLTFLVTGV------- 155 (528)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhh-hhcchhhhhhHHHHHH-------
Confidence 44445555555555666677888899999999999999999999999999999999 6999999998887777
Q ss_pred cccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccccc
Q 007862 104 KYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 183 (587)
Q Consensus 104 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (587)
.-..-+.+. |+..+...|.+.|+|.|+ .|...+.-.|..|..+
T Consensus 156 -----~~~is~~sp--------------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~----- 198 (528)
T KOG0253|consen 156 -----FGVISGASP--------------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH----- 198 (528)
T ss_pred -----HHHhhcCCC--------------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC-----
Confidence 333333333 677799999999999999 9999999999998855
Q ss_pred chhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHH-HHHHHHHHHHHHHhcc-ceeeeeCCCCChhhhHHHHHHHH
Q 007862 184 GINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGI-PTVLMIGAIILFLVGK-KLYVLVEPEGSIFSGIGQVLVAA 261 (587)
Q Consensus 184 ~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a 261 (587)
|....-.. ..+.+|.++...+.-....++||||.... ...+++.+...+|+.. ++|.. .++++.+ ..+.+...
T Consensus 199 -r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~--~~G~~~k-AletL~ki 273 (528)
T KOG0253|consen 199 -RWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYL--AKGDDYK-ALETLHKI 273 (528)
T ss_pred -CCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhh--hcCChHH-HHHHHHHH
Confidence 77666666 67788888888887777788899986544 4445555544444432 23321 1222222 23334444
Q ss_pred HHhccccCCC
Q 007862 262 YKKRRLTLPQ 271 (587)
Q Consensus 262 ~~~~~~~~~~ 271 (587)
.+..+..+|.
T Consensus 274 ArmNg~qlpl 283 (528)
T KOG0253|consen 274 ARMNGKQLPL 283 (528)
T ss_pred HHhcCCCCCc
Confidence 5555565554
No 109
>PRK11462 putative transporter; Provisional
Probab=99.50 E-value=3.3e-12 Score=140.39 Aligned_cols=173 Identities=8% Similarity=0.094 Sum_probs=120.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhc---cccchhhhhH-HHHHHHHhhh
Q 007862 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDT---YIGRFKTITF-ASIAAILLAE 99 (587)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~---~~Gr~~~~~~-~~~~~~~~~~ 99 (587)
..++..++.+..+..+++.|+++.+|++...+|.+..+.-+.=.+.-|+.|+++|| .+||||..++ +.+...+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i--- 92 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI--- 92 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH---
Confidence 44555566666677889999999999999999999999999999999999999996 2699877765 5456666
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+..++...... +.+....-+++.-++..++.........++.+|..++.
T Consensus 93 ---------~~~llf~~p~~--------------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~-- 141 (460)
T PRK11462 93 ---------VCVLAYSTPDL--------------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDP-- 141 (460)
T ss_pred ---------HHHHHHhCCCC--------------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCH--
Confidence 44333221100 01112333455555667888888878888888888753
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc-------cchhhHHHHHHHHHHHHHHH
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS-------VSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~-------~~w~~~f~i~~~~~~~~~~~ 233 (587)
++|.+..++...+.++|..+++.+...+... .+|+....+.+++.++...+
T Consensus 142 ---~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 142 ---TQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 3499999999999999888777665443322 35776655555544444333
No 110
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.50 E-value=6.1e-13 Score=146.12 Aligned_cols=151 Identities=13% Similarity=0.082 Sum_probs=126.1
Q ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCC
Q 007862 44 LLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLH 123 (587)
Q Consensus 44 l~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 123 (587)
+.+++|+...+.+.+.++|.++++++.+++|++.|| +.-.+.+..+.+++.++ +.+. +..
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r-~~ls~~l~~~~~~w~~~-----------~~~~-~~~------- 131 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDR-FPLSKGLSVSGILWGLF-----------GFLT-AAV------- 131 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHh-CChHHHHHHHHHHHHHH-----------HHHH-HHH-------
Confidence 447889999999999999999999999999999999 59788877777777662 2221 122
Q ss_pred CCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHH
Q 007862 124 PPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILIT 203 (587)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~ 203 (587)
++.+.+++.|++.|+.+++..|+...+++.+|.+++ |+.-+++++....+|.++|
T Consensus 132 -------------------~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~g 186 (495)
T KOG2533|consen 132 -------------------HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFG 186 (495)
T ss_pred -------------------hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHH
Confidence 278889999999999999999999999999999866 9999999999999999999
Q ss_pred hhhhhhcc------cccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 204 QTVLVYIQ------DSVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 204 ~~~~~~i~------~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
.++...+. ...||||.|+|.++++++..++.++..|
T Consensus 187 gliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 187 GLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred HHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 99988753 3578999999999877766655444333
No 111
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.50 E-value=1.3e-12 Score=139.54 Aligned_cols=393 Identities=11% Similarity=0.053 Sum_probs=223.7
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+..+......++..+++-...++++.+++++.|+|.++.|.+.++..+...+.+|+.|.++|| +|.||-++.......+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dk-lg~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDK-LGLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHH-CTTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcch-hhhhHHHHHHHHHHHH
Confidence 355666677777777777788899999999999999999999999999999999999999999 6988876655544333
Q ss_pred hhhcccccccccceEEE-eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 97 LAEHFVTKYQGKGMLTV-TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+. +-... .....+ ..-+.++.++.++..+.......+ +.|.+-
T Consensus 86 l~----------~pff~~v~~pll-------------------------~~n~~lg~iig~i~l~~~f~~~~~-~~Ea~~ 129 (412)
T PF01306_consen 86 LF----------GPFFIYVFGPLL-------------------------QSNFWLGAIIGGIYLGLVFNAGVP-LSEAYA 129 (412)
T ss_dssp TC----------HHHHHHTHHHHH-------------------------HTT-HHHHHHTTTTTTTTTTTHHH-HHHHHH
T ss_pred HH----------HHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHHHcccch-HHHHHH
Confidence 00 11111 011000 001234444445555554444444 224443
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIG 255 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (587)
+ +-+++.+-=+|-..+-..+|.+++..++|++.+ .+-+..|++.....++..++.+..++...++.+ ..
T Consensus 130 e---r~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~----~~--- 198 (412)
T PF01306_consen 130 E---RVSRRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAE----VA--- 198 (412)
T ss_dssp H---HHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-----SS---
T ss_pred H---HHHHHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhh----hh---
Confidence 2 122334445566678889999999999999876 455788888776655555554444432111000 00
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehh
Q 007862 256 QVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEV 335 (587)
Q Consensus 256 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 335 (587)
+.. . ...++.+..|-.. .-..
T Consensus 199 -------------------~~~---------~------~~~~~~~~~~~~~-------------------------l~k~ 219 (412)
T PF01306_consen 199 -------------------DAL---------G------AKKDKVSLKDVLS-------------------------LFKM 219 (412)
T ss_dssp -------------------TTS---------S------S------HHHHHH-------------------------HTTS
T ss_pred -------------------ccc---------c------cCCCCCcHHHHHH-------------------------Hhcc
Confidence 000 0 0000000000000 0012
Q ss_pred hhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCC
Q 007862 336 KCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEG 415 (587)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~ 415 (587)
|+++............+..+.|+...+...... +...+ - ...+..+++..+.-.+...+..++ .+|++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~-~~~~g--~-~~~G~l~s~~v~~E~~~m~~~p~l----i~rig---- 287 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQ-SAGQG--N-QMYGYLWSVQVFLEALMMFFSPWL----INRIG---- 287 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHH--H-HHHHHHHHHHHHHHHHHHHHHHHH----HHHH-----
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccC--h-hHHhHHHHHHHHHHHHHHHHHHHH----HHhcC----
Confidence 333333333333444555555554422111000 00010 0 012334444445555555554444 77764
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHH
Q 007862 416 GITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIA 495 (587)
Q Consensus 416 ~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~ 495 (587)
.++.+.++.+++.+=++..++. .+++++++.=.+-++-..+......-|..+.+|++..++.
T Consensus 288 ---~k~~Lllag~i~~iRi~~~~~~---------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~ 349 (412)
T PF01306_consen 288 ---AKNLLLLAGVIMAIRIIGSGFA---------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATL 349 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHT-----------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHH
T ss_pred ---hHhHHHHHHHHHHHHHHHHhhh---------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHH
Confidence 3445555555555555555543 4666777777888888888999999999999999999888
Q ss_pred HHHH-HHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007862 496 NSLL-FCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCAR 562 (587)
Q Consensus 496 ~gl~-~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~ 562 (587)
-.+. .+..++|..+.+.+.+.+.|.. ++..+|++++++.++..++..+..+
T Consensus 350 y~v~~~~~~~~~~~i~s~~~G~lyd~~----------------G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 350 YLVGFQFAKQIGIIILSPLAGYLYDRI----------------GFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhHhhc----------------CcHHHHHHHHHHHHHHHHHheeeec
Confidence 7774 5888999999988888888643 4566788888887777666665543
No 112
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.44 E-value=1.7e-11 Score=126.66 Aligned_cols=174 Identities=14% Similarity=0.133 Sum_probs=142.6
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
|-.+..+.++.+=-|..+-++ ..+..-+.+++|+|.+.+|++.++-.++..+.++++.+++.| +|-.+.+.+++++.+
T Consensus 11 ~~li~gIvlia~NLR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~-~g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARR-FGEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HhhHHHHHHHHHHHH
Confidence 333344444444444444433 344557899999999999999999999999999999999999 699999999999999
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ |.++=... +...++.+-++.|.|.+......++.+-+.||
T Consensus 89 ~------------G~~iR~~~---------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp 129 (395)
T COG2807 89 A------------GILIRSLG---------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP 129 (395)
T ss_pred H------------HHHHHhcc---------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc
Confidence 9 77653332 34568999999999999999999999999999
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccccc-chhhHHHHHHHHHHHHHHHHHhc
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
++ -+..++.|.+..++|+++++.+...+.++. |||..+.+-+.+.+++++.++..
T Consensus 130 k~-------~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq 185 (395)
T COG2807 130 KR-------VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ 185 (395)
T ss_pred cc-------hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence 64 588999999999999999999999998776 79999988888888888777654
No 113
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.36 E-value=4.6e-12 Score=136.00 Aligned_cols=177 Identities=14% Similarity=0.138 Sum_probs=133.6
Q ss_pred CCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHH
Q 007862 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 93 (587)
++++..+..+....+....++....+++.|+++++|+++.+++++.....+...++.+++|+++|| +|||+.+..+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr-~g~~~~~~~~~~~ 291 (393)
T PRK15011 213 RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR-LGKRFLMRVAAVA 291 (393)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHH
Confidence 344555555555555555555566788999999999999999999888888888899999999999 5999988877665
Q ss_pred HHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 94 AILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 94 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
..+ ......... +...++..+++.+++.|...+....+..|.
T Consensus 292 ~~~------------~~~~~~~~~--------------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~ 333 (393)
T PRK15011 292 GVC------------FYAGMLMAH--------------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDL 333 (393)
T ss_pred HHH------------HHHHHHHHh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 554 322211111 445566677777777776666666777888
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 174 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+|+ +|+++.+++....++|..++|.++|++.+.++|+..|.+..+..++++++.+.
T Consensus 334 ~p~-------~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK15011 334 MPG-------QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLR 389 (393)
T ss_pred CCC-------CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 774 27899999998899999999999999999999999999888777776665544
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.31 E-value=6.1e-10 Score=120.48 Aligned_cols=373 Identities=12% Similarity=0.067 Sum_probs=217.9
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc---ccchhhh
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTI 87 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~ 87 (587)
+++-++|+-+.=-.-.+..++.+--+..+++.|.+...|+|...+|.+..+.=+.-.+.-|+.|.+.||. +||||-.
T Consensus 6 ~~kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~ 85 (467)
T COG2211 6 SKKLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPW 85 (467)
T ss_pred cCcccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHH
Confidence 3455555554444556667777777888999999999999999999999999999999999999999963 5887776
Q ss_pred hHHH-HHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccc
Q 007862 88 TFAS-IAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCS 166 (587)
Q Consensus 88 ~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 166 (587)
+.-. +...+ ...++..+.. .+. ..+..-.++.-.+.++++..+.-.-
T Consensus 86 lL~g~ip~~i------------~~~l~F~~p~---------~~~-----------~~k~~ya~vtY~l~~l~YT~vniPy 133 (467)
T COG2211 86 LLWGAIPFAI------------VAVLLFITPD---------FSM-----------TGKLIYALVTYMLLGLGYTLVNIPY 133 (467)
T ss_pred HHHHhHHHHH------------HHHHHHcCCC---------ccc-----------CcchHHHHHHHHHHHHHHHheeCch
Confidence 5544 55555 3333333221 000 0133445566677889999998888
Q ss_pred cccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-------ccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 167 IPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-------SVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-------~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
.++.++..++.+ +|.+..+|-....++|.++...+.+.+.. ..||+..-++.++...+++...++..+
T Consensus 134 ~al~~~iT~d~~-----ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ 208 (467)
T COG2211 134 GALGPEITQDPQ-----ERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVK 208 (467)
T ss_pred hhcchhhcCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 899999887643 49999999999999997777666555432 345665544444444444333333222
Q ss_pred eeee-eCCCCChhhhHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCC
Q 007862 240 LYVL-VEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDG 318 (587)
Q Consensus 240 ~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (587)
+... ..+.++ ++...+.+.......
T Consensus 209 ER~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~-------- 234 (467)
T COG2211 209 ERVVETQPTKT----------------------------------------------GVKLKLKDSFLLIFK-------- 234 (467)
T ss_pred cccCccccCcc----------------------------------------------cccccHHHHHHHHHc--------
Confidence 2111 000000 000011111111000
Q ss_pred CCCCccccccceeeehhhhhhhhhHHHHHHHHHHhhhccccceeeeeeccccccCCCccccCcccccccchhhhhhhhhc
Q 007862 319 TPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLTSISQQGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPF 398 (587)
Q Consensus 319 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l 398 (587)
.|.++..+....+.............++.......+. ..+...........++..++
T Consensus 235 ----------------Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~-------l~~~~~~~~~~~~~l~~~~~ 291 (467)
T COG2211 235 ----------------NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPE-------LFAYLLLLASGAGLLIGLIL 291 (467)
T ss_pred ----------------cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChH-------HHHHHHHHHHHHHHHHHHHh
Confidence 1111112222221211111111111222211111111 11222222233333333343
Q ss_pred hhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhh
Q 007862 399 YDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIG 478 (587)
Q Consensus 399 ~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~ 478 (587)
..++.+|++|| +....|.++..++.+..-+.. ..+...+++..++.++|.+...+.
T Consensus 292 ----~p~L~~~~gkk-------~~~~~~~~~~~i~~~~~~f~~-------------~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 292 ----WPRLVKKFGKK-------KLFLIGLLLLAVGYLLLYFTP-------------AGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred ----HHHHHHHhchH-------HHHHHHHHHHHHHHHHHHhhc-------------CcchHHHHHHHHHHHHHhhccccc
Confidence 33346676444 566666776666666555431 235555666678889999999999
Q ss_pred hHHHHHhhCC-------chhhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007862 479 QIEFFNKQFP-------DHMKSIANSLLFCSFGFASYLSSLLITIVHGVT 521 (587)
Q Consensus 479 ~~~~~~~~~P-------~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~ 521 (587)
.++...|... .+..|..-|...++.=+|..++.++.+++.+..
T Consensus 348 ~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~ 397 (467)
T COG2211 348 PWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI 397 (467)
T ss_pred cHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9988887665 345677888899999999999999999988755
No 115
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.29 E-value=1.6e-11 Score=135.95 Aligned_cols=178 Identities=16% Similarity=0.161 Sum_probs=130.1
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
|+.........++....+|++..++|.|+++++|++..+.+++.....++..++.+++|+++|| +|||+++.++.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~~~~~~~~~~ 327 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR-FGRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHH
Confidence 3333333444455667889999999999999999999888888888888899999999999999 599999988876544
Q ss_pred HhhhcccccccccceEE-EeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC
Q 007862 96 LLAEHFVTKYQGKGMLT-VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 174 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 174 (587)
+ +... ..... ..+...+++++++.+++.++..+....+..|.+
T Consensus 328 ~------------~~~~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 371 (490)
T PRK10642 328 V------------LAIPAFILIN------------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMF 371 (490)
T ss_pred H------------HHHHHHHHHh------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3 2211 11111 014556778888888877777777778888999
Q ss_pred CCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccccc-chhhHHHHHHHHHHHHHHHHHh
Q 007862 175 DATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 175 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
|++. |+++.++.|....+++.++|.+.+++.+.. +|+..+++..+..+++++..++
T Consensus 372 p~~~------Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 372 PTHI------RYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred CCcc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 9865 999999877777777889999999988754 4676665555444444444433
No 116
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.28 E-value=1.1e-11 Score=132.91 Aligned_cols=167 Identities=14% Similarity=0.118 Sum_probs=130.6
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccc
Q 007862 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQG 107 (587)
Q Consensus 28 ~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 107 (587)
+..+++.....+++.|+. +.|.+ +.++....+.++..++.++.|+++|| +||||.+.++.++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~~~~~~~~----------- 291 (399)
T PRK05122 227 LASIGFGTIATFITLYYA-ARGWD--GAALALTLFGVAFVGARLLFGNLINR-LGGLRVAIVSLLVEIL----------- 291 (399)
T ss_pred HHHHHHHHHHHHHHHHHH-Hcccc--cchHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH-----------
Confidence 444556666677788865 45653 44566777888888999999999999 5999999988887777
Q ss_pred cceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhh
Q 007862 108 KGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 187 (587)
Q Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 187 (587)
+.+...... +...++..+++.|++.+...|.......|.+|+++ |++
T Consensus 292 -~~~~~~~~~--------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~ 338 (399)
T PRK05122 292 -GLLLLWLAP--------------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGA 338 (399)
T ss_pred -HHHHHHHhc--------------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHH
Confidence 655444432 44556778899999999988888888888888654 999
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceee
Q 007862 188 FFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYV 242 (587)
Q Consensus 188 ~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~ 242 (587)
++++++...++|..+++.+.|++.+..||+..|.+.++..+++++..+..+++.+
T Consensus 339 ~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 339 ALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999999999888877777666555544433
No 117
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.28 E-value=1.7e-11 Score=129.49 Aligned_cols=171 Identities=16% Similarity=0.145 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+......++...........++.|+.+++|.++.+.+++.....+...++.+++|+++|| +|||+++.++.++..+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~--- 277 (375)
T TIGR00899 202 RLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKR-FGKRRLMLLAALAGVA--- 277 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hcchhHHHHHHHHHHH---
Confidence 333334444444444555678889999999999999998888877788888999999999 5999999888776555
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
......... +.+.++..+.+.+++.|...+....+..|.+|+ +
T Consensus 278 ---------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~- 320 (375)
T TIGR00899 278 ---------FYTGLAADN--------------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R- 320 (375)
T ss_pred ---------HHHHHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h-
Confidence 433222222 455667778888998888888888888888764 2
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+++++++++...++|..++|.+.+++.+..||+..|++.++..+++.++.++
T Consensus 321 -----~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 321 -----AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 5699999999999999999999999999999999999888877776665443
No 118
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.26 E-value=2.7e-11 Score=125.38 Aligned_cols=172 Identities=20% Similarity=0.253 Sum_probs=149.1
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchh-hhhHHHHHHHH
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFK-TITFASIAAIL 96 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~-~~~~~~~~~~~ 96 (587)
.++......++...........++.|+.+.+|.++.+.+++.....++..++.++.|+++|| +|||+ .+.++.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR-LGRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHH
Confidence 44555566667777777788888889888889999999999999999999999999999999 59999 99999988888
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.+...... +....+....+.+++.+...+....++.|..|+
T Consensus 255 ------------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 296 (352)
T cd06174 255 ------------GLLLLALAP--------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPP 296 (352)
T ss_pred ------------HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCH
Confidence 666555543 456788899999999999999999999999997
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
++ |++.++......++|..+++.+.+++.+..+|+..|.+.+++.+++.+..
T Consensus 297 ~~------~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 297 EA------RGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 54 99999999999999999999999999999999999999888877766654
No 119
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.26 E-value=1.7e-11 Score=128.58 Aligned_cols=168 Identities=13% Similarity=0.123 Sum_probs=130.8
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+......++............+.| .+++|.++.+.+.+.....++..++.+++|+++|| +|||+.+.++.++..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~--- 282 (377)
T TIGR00890 208 WVLYLSFFLNAVSGLLLIGLYKPY-GQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDK-IGRQKTMSIVFGISAV--- 282 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHH---
Confidence 333333344444444455555666 46789999999999999999999999999999999 5999999999888877
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+.++..+... .+...++....+.+++.|...+..+.++.|.+|+++
T Consensus 283 ---------~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~- 328 (377)
T TIGR00890 283 ---------GMAAMLFIPM------------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN- 328 (377)
T ss_pred ---------HHHHHHHccc------------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh-
Confidence 6554443321 012234455677888888888888889999999855
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHH
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAI 231 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~ 231 (587)
|++.+++++...++|..++|.+.+++.+..||++.|.+.+++.++++
T Consensus 329 -----~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 329 -----SAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred -----hhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999988777666543
No 120
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.26 E-value=1.7e-11 Score=134.76 Aligned_cols=175 Identities=16% Similarity=0.068 Sum_probs=128.5
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.+|......++....++++..++|.|+++++|+|..++++......++..++.+++|+++|| +|||+.+.+...+..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~g~r~~~~~~~~~~~~- 336 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDL-ANGRRALVACIALALI- 336 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCchHHHHHHHHHH-
Confidence 35556666667777778888899999999999999999999999999999999999999999 5999987765544333
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.....+.. . .+.....+.+++.|+...+..........|.+|++
T Consensus 337 -----------~~~~~~~~~--~----------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~ 381 (467)
T PRK09556 337 -----------IFTLGVYQH--A----------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKK 381 (467)
T ss_pred -----------HHHHHHHHh--c----------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchh
Confidence 221111111 0 13344556666666543333322335566999875
Q ss_pred CcccccchhhhhhHHHHHHHH-HHHHHhhhhhhccc------------ccchhhHHHHHHHHHHHHHHHHH
Q 007862 178 TDEGVKGINSFFNWYYTTFTV-VILITQTVLVYIQD------------SVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~-g~~i~~~~~~~i~~------------~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
. |+++.++.....++ |..++|.+.|++.| ..+|+..|.+..+..+++++..+
T Consensus 382 ~------~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 382 A------IGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred h------HHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 5 99999999988886 77999999999999 57899999887777776655544
No 121
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.24 E-value=1.7e-09 Score=119.12 Aligned_cols=84 Identities=14% Similarity=0.199 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchh
Q 007862 461 LAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLD 540 (587)
Q Consensus 461 li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~ 540 (587)
+.+.-++.|+..+...+..-++..++.|++..+...|++.++....+.+||++.+.+.+.++ +..
T Consensus 383 f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg---------------~~r 447 (477)
T PF11700_consen 383 FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG---------------SQR 447 (477)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------Cch
Confidence 44445678889999999999999999999999999999999999999999999999987651 233
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007862 541 YFYFLIAGLGGLNIVYFLY 559 (587)
Q Consensus 541 ~~f~~~~~~~~l~~v~~~~ 559 (587)
+.+..+.++.+++.++...
T Consensus 448 ~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 448 YGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred hHHHHHHHHHHHHHHHHhh
Confidence 5567777777777766643
No 122
>PRK03699 putative transporter; Provisional
Probab=99.22 E-value=3.4e-11 Score=129.21 Aligned_cols=170 Identities=15% Similarity=0.102 Sum_probs=131.1
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
++......++...+.+++..++|.|+++++|+|..+++.+.+.+.++..++.+++|+++|| +|||+++..+..+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~l~~~~~~~~~-- 283 (394)
T PRK03699 207 VLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRF-FDLQRILTVLAGLALV-- 283 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHH--
Confidence 3444444455556677888999999999999999999999999999999999999999999 6999998887766555
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+..+..... +...+....++.|++.++..+...+...|..|.+
T Consensus 284 ----------~~~~~~~~~--------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~- 326 (394)
T PRK03699 284 ----------LMYLFVNTD--------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA- 326 (394)
T ss_pred ----------HHHHHHHcC--------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-
Confidence 433332222 3334555667788888888888777777766532
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
+++..++.....++|..++|.+.|++.+..||+..|++..+..+++.++.
T Consensus 327 ------~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 327 ------SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred ------CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 45667888888899999999999999999999999988776666665443
No 123
>PRK12382 putative transporter; Provisional
Probab=99.22 E-value=3.2e-11 Score=129.01 Aligned_cols=161 Identities=15% Similarity=0.150 Sum_probs=128.2
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccc
Q 007862 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQG 107 (587)
Q Consensus 28 ~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 107 (587)
+..+.+..+..+.+.|+.+ .|.+. .+.....+.++..++.++.|++.|| +||||.+.++.++..+
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~----------- 291 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDR-FGGVKVAIVSLLVETV----------- 291 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHH-----------
Confidence 3445555666677777654 56553 5566677778888999999999999 6999999999888877
Q ss_pred cceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhh
Q 007862 108 KGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 187 (587)
Q Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 187 (587)
+.++..+.. +...++....+.|++.+...|.......|.+|+++ |++
T Consensus 292 -~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 338 (392)
T PRK12382 292 -GLLLLWLAP--------------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGT 338 (392)
T ss_pred -HHHHHHHcc--------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHH
Confidence 665544432 44566778889999999888888888888888754 999
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 188 FFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 188 ~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
.+++++...++|..++|.+.+++.+..||+..|.+.+++.++++++.+.
T Consensus 339 ~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 339 ALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988877777666544
No 124
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.21 E-value=5.7e-11 Score=127.20 Aligned_cols=170 Identities=12% Similarity=0.054 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCChh---hHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQT---SAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~---~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
.+...++.......+...++.|+.+..+.... ..+.+..+..++..++.++.|+++|| +|||+++.++.++..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~-- 300 (408)
T PRK09874 224 LFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR-IGPEKILITALIFSVL-- 300 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccchhHHHHHHHHHH--
Confidence 33334444455555666777787765443221 24556666777788889999999999 6999999998887776
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+.+...... +.+.+++.+++.|++.+...|...+.+.|..|+++
T Consensus 301 ----------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (408)
T PRK09874 301 ----------LLIPMSFVQ--------------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI 344 (408)
T ss_pred ----------HHHHHHHhc--------------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc
Confidence 554433322 45667788899999999999998888888777644
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
|++.+++++...++|..+||.++|++.+..||++.|++.+++.+++.++.+.
T Consensus 345 ------~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 345 ------AGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred ------ceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988887777666544
No 125
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.21 E-value=3e-09 Score=112.46 Aligned_cols=346 Identities=11% Similarity=0.067 Sum_probs=199.1
Q ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcccc-----chhhhhH-HHHHHHHhhhcccccccccceEEEeeec
Q 007862 44 LLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG-----RFKTITF-ASIAAILLAEHFVTKYQGKGMLTVTLTA 117 (587)
Q Consensus 44 l~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G-----r~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 117 (587)
+-.|++++..-.+.+++....... ..+..|+.||++ + ||-.+++ +.++++. |..+...+.
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~------------g~~~ap~a~ 71 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAG------------GLAIAPFAL 71 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHH------------HHHHHHHHH
Confidence 345889988888888887776665 588899999995 7 6655554 4444444 443333222
Q ss_pred cCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHH
Q 007862 118 WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFT 197 (587)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 197 (587)
.+- .. .. ...+.+.........+...+.|+|.+....+..++.+|..|+++ |++..++.|.+.-
T Consensus 72 ~~l--~~-~~-------~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli 135 (403)
T PF03209_consen 72 LLL--AE-SG-------QQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLI 135 (403)
T ss_pred HHH--cc-cc-------cccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHH
Confidence 100 00 00 00112222334466777788899999999999999999999865 9999999999999
Q ss_pred HHHHHHhhhhhhcccccchh-h---HHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHHHHHHHHhccccCCCCC
Q 007862 198 VVILITQTVLVYIQDSVSWV-I---GFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQ 273 (587)
Q Consensus 198 ~g~~i~~~~~~~i~~~~~w~-~---~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 273 (587)
+|..++..+.+.+.+.++-. . .-..+.+...+.++..+=.+++..+..+ .++
T Consensus 136 ~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~----------------------~~~-- 191 (403)
T PF03209_consen 136 VGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAA----------------------AAE-- 191 (403)
T ss_pred HHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccc----------------------CCC--
Confidence 99999999999988877632 2 2122222222222222211111111000 000
Q ss_pred CCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccceeeehhhhhhhhhHHHHHHHHHHh
Q 007862 274 MDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQQVEEVKCLIKIIPIWAAGIISLT 353 (587)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (587)
.++.++.+....... ..+.|+++. .++.....+.+
T Consensus 192 ----------------------~~~~~f~~a~~~~~~---------------------~~~a~~f~~--fl~l~t~a~~~ 226 (403)
T PF03209_consen 192 ----------------------RPRPPFREAWRQVWA---------------------SPQARRFFV--FLFLGTLAFFM 226 (403)
T ss_pred ----------------------CCCccHHHHHHHHHh---------------------CCChhHHHH--HHHHHHHHHHh
Confidence 000111111110000 001122111 11121222222
Q ss_pred hhccccceeeeeeccccccCCCccccC---cccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHH
Q 007862 354 SISQQGTFTVSQAMKMNRHLGPKFQIP---PGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFS 430 (587)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~ 430 (587)
.-.-+-+ +-.+. |.++ ...++.....+.++...+..++. .++. .+.+....|....
T Consensus 227 QD~iLEP---ygg~V--------fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l---~~~~-------~~~~~a~~G~~~~ 285 (403)
T PF03209_consen 227 QDVILEP---YGGEV--------FGMSVGETTRLTAFWGGGTLLGMLLAGFLL---SRRL-------GKKRTAALGCLLG 285 (403)
T ss_pred hHHHcCC---chhHH--------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCC-------CchHHHHHHHHHH
Confidence 1111111 11111 1122 23444455666666666655542 1122 2233344555555
Q ss_pred HHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHH
Q 007862 431 ILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLS 510 (587)
Q Consensus 431 ~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~ 510 (587)
.+++....... ...+.+.+.+..+++|++.++......+..++..+++..|+.+|.|...+.++..++
T Consensus 286 ~~~f~lii~a~------------~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg 353 (403)
T PF03209_consen 286 ALAFALIILAG------------PLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLG 353 (403)
T ss_pred HHHHHHHHHHH------------hcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 55554444332 123566788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccc
Q 007862 511 SLLITIVHGVT 521 (587)
Q Consensus 511 ~~l~~~v~~~~ 521 (587)
..+.+.+.|..
T Consensus 354 ~~~GG~~~D~~ 364 (403)
T PF03209_consen 354 TFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 126
>PRK09952 shikimate transporter; Provisional
Probab=99.21 E-value=6.1e-11 Score=129.43 Aligned_cols=180 Identities=15% Similarity=0.051 Sum_probs=130.7
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
++.........++..+.+|....+++.|+++++|++......+..+......++.+++|+++|| +||||++..+.++..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr-~grr~~~~~~~~~~~ 327 (438)
T PRK09952 249 PGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR-FGRRRVYITGALIGT 327 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchHHHHHHHHHHH
Confidence 3333444455667778889899999999999999998877666667777778889999999999 699999988876655
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.+....... ...+...++...++.+++.+...+...+++.|.+|
T Consensus 328 ~------------~~~~~~~~~~----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p 373 (438)
T PRK09952 328 L------------SAFPFFMALE----------------------AQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFG 373 (438)
T ss_pred H------------HHHHHHHHHH----------------------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 5 3322211110 00023344455566688888888888999999999
Q ss_pred CCCcccccchhhhhhHHHHHH-HHHHHHHhhhhhhccccc--chhhHHHHHHHHHHHHHHHHHh
Q 007862 176 ATTDEGVKGINSFFNWYYTTF-TVVILITQTVLVYIQDSV--SWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~-~~g~~i~~~~~~~i~~~~--~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
++. |+++.++.+... .+|+.++|.+.+++.+.. +|+..|.+..+..+++.+..+.
T Consensus 374 ~~~------r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 431 (438)
T PRK09952 374 ASY------RYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL 431 (438)
T ss_pred cch------hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 854 888999877554 589999999999997743 4888887776666666555444
No 127
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.21 E-value=1.3e-10 Score=122.14 Aligned_cols=172 Identities=13% Similarity=0.058 Sum_probs=127.4
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhh--h------h
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKT--I------T 88 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~--~------~ 88 (587)
|.++......++....++....+++.|+.+++|.+..+.+++..+..+...++.+++|+++|| +|||+. + .
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL-LLRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH-HhhcccchhHHHHHHH
Confidence 345566677777778888888899999999999999999999999999999999999999999 599961 1 1
Q ss_pred HHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccc
Q 007862 89 FASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIP 168 (587)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 168 (587)
++.++..+ ......... +....+....+.+.+.+ ..+...+
T Consensus 294 ~~~~~~~~------------~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~-~~~~~~~ 334 (399)
T TIGR00893 294 IAGLVLSL------------LMFATNYVN--------------------------IPYAALALVALGFFGLG-AGAIGWA 334 (399)
T ss_pred HHHHHHHH------------HHHHhccch--------------------------hHHHHHHHHHHHHhchh-hhhHHHH
Confidence 11111111 111111110 22333333333334444 7899999
Q ss_pred cccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHHH
Q 007862 169 FGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 169 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~~ 234 (587)
+..|.+|+++ |++.+++.....++|..++|.+.+++.+..| |+..|.+.++..+++.+..
T Consensus 335 ~~~~~~~~~~------~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 335 LISDNAPGNI------AGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHhhcChhH------HHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999855 9999999999999999999999999999988 9999988777666665544
No 128
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.19 E-value=5.9e-11 Score=128.85 Aligned_cols=178 Identities=11% Similarity=-0.027 Sum_probs=135.5
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCCh--------hhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHH
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQ--------TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFAS 91 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~--------~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~ 91 (587)
+..+...++..........+++.|+. +.|.++ ...+.+.++..+...++.++.|+++|| +|||+++.++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr-~g~r~~l~~~~ 288 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKR-FGIKKVMLLSL 288 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHH
Confidence 44445555555555455566777765 455443 566888999999999999999999999 69999999999
Q ss_pred HHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccc
Q 007862 92 IAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGV 171 (587)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 171 (587)
++..+ +..+...... +..+...+++..++.|++.+...++...++.
T Consensus 289 ~~~~v------------~~~l~~~~~~----------------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~ 334 (418)
T TIGR00889 289 VAWAL------------RFGFFAYGDP----------------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVE 334 (418)
T ss_pred HHHHH------------HHHHHHHcCc----------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888 6544443220 0113456778899999999999999999999
Q ss_pred ccCCCCCcccccchhhhhhHHH-HHHHHHHHHHhhhhhhcccc------cchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 172 DQFDATTDEGVKGINSFFNWYY-TTFTVVILITQTVLVYIQDS------VSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 172 ~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~i~~~------~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
|.+|+++ |++++++.+ ....+|..+||.++|++.+. +||+..|.+.++..+++.+++++..+
T Consensus 335 ~~~p~~~------~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 335 KEVPVHI------RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHCCHHH------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999755 999999997 56789999999999999886 46999999887776666666554443
No 129
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.18 E-value=8e-11 Score=125.22 Aligned_cols=157 Identities=15% Similarity=0.124 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcc
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHF 101 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~ 101 (587)
......+...........++.|+.+++|++..+.+++.....++..++.++.|+++|| +|||+++.++.++..+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~~---- 317 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW-LGRRKAYVCSLLAGQLL---- 317 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCchhhhHHHHHHHHHH----
Confidence 3333444445555667788999999999999999999999999999999999999999 69999998887765330
Q ss_pred cccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccc
Q 007862 102 VTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEG 181 (587)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 181 (587)
......... +...+.++..+.++..++..+...+++.|.+|+++
T Consensus 318 -------~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 361 (405)
T TIGR00891 318 -------IIPVFAIGA--------------------------NVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ--- 361 (405)
T ss_pred -------HHHHHHhCC--------------------------chHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch---
Confidence 111111111 34455666667777777777888889999998755
Q ss_pred ccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHH
Q 007862 182 VKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGI 222 (587)
Q Consensus 182 ~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i 222 (587)
|++.+++.+...++|..++|.+.|++.|..| |+..|..
T Consensus 362 ---~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 362 ---RAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred ---hHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999999999999999988 8877665
No 130
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.17 E-value=5.3e-11 Score=125.64 Aligned_cols=168 Identities=15% Similarity=0.032 Sum_probs=129.6
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
..+......++....++.+..+++.|+++++|.+..+.+.+.....+...++.+++|+++|| +|||+++..+.++..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDR-IGRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHH
Confidence 35666666777778888888899999999999999999999999999999999999999999 59999887655544330
Q ss_pred hhcccccccccceEEE-eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 98 AEHFVTKYQGKGMLTV-TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.... .+.. ..+...++...++.+++.+...+...+++.|.+|+
T Consensus 299 -----------~~~~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 343 (394)
T TIGR00883 299 -----------AVPLLMALLD------------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPT 343 (394)
T ss_pred -----------HHHHHHHHhc------------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCc
Confidence 21111 1111 01445566777888999999999999999999998
Q ss_pred CCcccccchhhhhhHHH-HHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYY-TTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLM 227 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~ 227 (587)
++ |+++++..+ ....+|..++|.++|++.+..| |++.++...+..
T Consensus 344 ~~------~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 344 EV------RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred cc------eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 55 888888855 4456888999999999999888 887766555433
No 131
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.15 E-value=2.8e-10 Score=122.34 Aligned_cols=175 Identities=12% Similarity=0.097 Sum_probs=132.6
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
.+.+.....+...+++++..+++.|+.+ +|.+..+++.....+.++..++.++.|+++|| +|||+++.++..+..+
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r-~~~~~~~~~~~~l~~~-- 282 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARH-QDRRKLLMLALVLQLV-- 282 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhh-ccchHHHHHHHHHHHH--
Confidence 3444455556667888888999999875 89999999999999999999999999999999 6999999998877766
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+.+...... . +...+ ..++.|++.|...|.......|.++++
T Consensus 283 ----------~~~~~~~~~---~----------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~- 324 (393)
T PRK09705 283 ----------GFCGFIWLP---L----------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQP- 324 (393)
T ss_pred ----------HHHHHHHcc---c----------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCH-
Confidence 554322211 0 11112 224568888888887777777777532
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHHHHhccc
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
+.+++.+++.+...+++..++|.+.|++.|..| |...|.+.++..+++++..+...+
T Consensus 325 ----~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 325 ----AIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 238999999999999999999999999999876 788888877666666555444433
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=99.15 E-value=3.3e-10 Score=121.28 Aligned_cols=174 Identities=9% Similarity=-0.044 Sum_probs=131.6
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+......++.....++...++++|+.+++|+|..+++++..++.++..++.++.|+++|| +|||+.+ .+..+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~-~~~~~~~~--- 282 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNR-HPSGFLL-IAIALLLV--- 282 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHH-HHHHHHHH---
Confidence 334444455555666666778888888899999999999999999999999999999999 5988654 44443333
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+........ .+...++...++.|++.+...+.....+.+..|+ +
T Consensus 283 ---------~~~~l~~~~-------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~- 326 (390)
T PRK03545 283 ---------CLLLLLPAA-------------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A- 326 (390)
T ss_pred ---------HHHHHHHHh-------------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c-
Confidence 322211111 1455667777888888888777777777776653 3
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
|+++++++....++|..+||.++|++.+..|++..|.+.+++.+++++......+
T Consensus 327 -----~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 327 -----TDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 7899999999999999999999999999999999999988888777776655443
No 133
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.15 E-value=2e-11 Score=109.10 Aligned_cols=132 Identities=14% Similarity=0.159 Sum_probs=110.7
Q ss_pred HHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccC
Q 007862 60 NIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKS 139 (587)
Q Consensus 60 ~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (587)
..+.++..++.++.|+++|| +|||+++..+.++..+ +.+......
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~-~g~~~~~~~~~~~~~~------------~~~~~~~~~---------------------- 49 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDR-FGRKPVLLVGLFIFVL------------STAMFALSS---------------------- 49 (141)
T ss_pred EeehhHHHHHHhhHHHHHhh-cchhHHHHHHHHHHHH------------HHHHHHHhc----------------------
Confidence 44567788899999999999 5999999999888877 655444432
Q ss_pred CcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhH
Q 007862 140 ANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIG 219 (587)
Q Consensus 140 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~ 219 (587)
+.+.+.+.+.+.|++.+...+....+..|.+|+++ |++..++.+...++|..++|.+.+++.+..+|++.
T Consensus 50 ----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 119 (141)
T TIGR00880 50 ----NITVLIIARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAP 119 (141)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHH
Confidence 56678888999999999999999999999999865 99999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 007862 220 FGIPTVLMIGAIILFLV 236 (587)
Q Consensus 220 f~i~~~~~~~~~~~~~~ 236 (587)
|.+.....++..+..+.
T Consensus 120 ~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 120 FLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 98877766665555443
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.14 E-value=3.3e-10 Score=124.98 Aligned_cols=149 Identities=15% Similarity=0.096 Sum_probs=114.8
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
+.+..++|.|+++++|++..+++++.....++..++.+++|+++|| +|||+++.++.++..+ +.++.
T Consensus 292 ~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr-~g~~~~~~~~~~~~~~------------~~~~~ 358 (496)
T PRK03893 292 WPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW-LGTRKAYVCSLLISQL------------LIIPV 358 (496)
T ss_pred chHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHH------------HHHHH
Confidence 3466788999999999999999999999999999999999999999 6999999888776665 44332
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
..... .+.+.+....++.+....+..+..+.++.|.+|+++ |++.+++++
T Consensus 359 ~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~ 408 (496)
T PRK03893 359 FAIGG------------------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTY 408 (496)
T ss_pred hhccc------------------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhh
Confidence 22110 133333333444443333445667778889998754 999999999
Q ss_pred HHHHHHHHHHhhhhhhcccccchhhHHHHHHH
Q 007862 194 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTV 225 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~ 225 (587)
...++|..+||.++|++.+.+||+..+.+...
T Consensus 409 ~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 409 NVGALGGALAPILGALIAQRLDLGTALASLSF 440 (496)
T ss_pred hhhhHHHHHHHHHHHHHhccCChHHHHHHHHH
Confidence 99999999999999999999999987765443
No 135
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.14 E-value=9.5e-11 Score=126.80 Aligned_cols=159 Identities=8% Similarity=0.009 Sum_probs=125.3
Q ss_pred HHhhhhHHHHHHHHHHhh---CCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccc
Q 007862 31 LATIGLLANFMVYLLKEY---HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQG 107 (587)
Q Consensus 31 ~~~~~~~~~~~~yl~~~~---~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 107 (587)
..+......++.|+.+.+ +.+..+.+.+.++..+...++.+++|+++|| +||||.+.++.++..+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~l~~~----------- 304 (420)
T PRK09528 237 CFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINR-IGAKNALLLAGTIMAV----------- 304 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcchhhHHHHHHHHH-----------
Confidence 333344445777776554 5667788999999999999999999999999 6999999999888887
Q ss_pred cceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhh
Q 007862 108 KGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 187 (587)
Q Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 187 (587)
+.++.+++. +.+.+++.+.+.+++.+...+....++.|.+|++. |++
T Consensus 305 -~~~l~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~ 351 (420)
T PRK09528 305 -RIIGSGFAT--------------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SAT 351 (420)
T ss_pred -HHHHHHhcc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eee
Confidence 766655544 55667888999999988888888888899888744 777
Q ss_pred hhhH-HHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 188 FFNW-YYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 188 ~~~~-~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
.++. +....++|..++|.+.|++.|..||+..|.+.+++.++..++.
T Consensus 352 ~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 352 IYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHH
Confidence 7655 5567889999999999999999999999998776655544443
No 136
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.12 E-value=3.1e-10 Score=121.73 Aligned_cols=164 Identities=9% Similarity=-0.027 Sum_probs=125.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccc
Q 007862 26 ETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKY 105 (587)
Q Consensus 26 ~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~ 105 (587)
.++....++....+++.|+. +.|++..+.+.+.....++..++.++.|+++|| +|||+++..+.+...+
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~--------- 297 (406)
T PRK11551 229 YFFTLIVLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDR-LRPRRVVLLIYAGILA--------- 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH---------
Confidence 33444555666677787765 579999999999999999999999999999999 5999999887766655
Q ss_pred cccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccch
Q 007862 106 QGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 185 (587)
Q Consensus 106 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 185 (587)
+.+...... +...+.+..++.|++.++..+...++..|.+|+++ |
T Consensus 298 ---~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~ 342 (406)
T PRK11551 298 ---SLAALAAAP--------------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------R 342 (406)
T ss_pred ---HHHHHHhcC--------------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------h
Confidence 443333322 33445566677788888888888899999999865 9
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhhccccc-chhhHHHHHHHHHHHHHHHHH
Q 007862 186 NSFFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 186 ~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-~w~~~f~i~~~~~~~~~~~~~ 235 (587)
++..++.+....+|..++|.+.|++.+.. +|...+.+.....++++++.+
T Consensus 343 g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 343 GTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred hhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998764 456666666555555544433
No 137
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.12 E-value=1.5e-10 Score=115.50 Aligned_cols=135 Identities=13% Similarity=0.191 Sum_probs=109.0
Q ss_pred HHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeecc
Q 007862 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAW 118 (587)
Q Consensus 39 ~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 118 (587)
-+-.+.+.+.+.+.++..++.+.++.-..+.+.++||+.||.+|-|..-++-++...+ |-+..+...+
T Consensus 65 alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~------------GqliFa~Ggi 132 (459)
T KOG4686|consen 65 ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFL------------GQLIFAAGGI 132 (459)
T ss_pred hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHH------------HHHHHHhchH
Confidence 4556777777888888999999999999999999999999998988766665555566 6555443322
Q ss_pred CCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHH
Q 007862 119 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 198 (587)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 198 (587)
.+.++....+|++.|+|.-..-.+-..+.+.+|..+| .+..|+++-....+
T Consensus 133 -----------------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~ 183 (459)
T KOG4686|consen 133 -----------------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARL 183 (459)
T ss_pred -----------------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHh
Confidence 2378999999999999998888889999999999865 99999999999899
Q ss_pred HHHHHhhhhhhccccc
Q 007862 199 VILITQTVLVYIQDSV 214 (587)
Q Consensus 199 g~~i~~~~~~~i~~~~ 214 (587)
|...-..+-+++.+..
T Consensus 184 GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 184 GSTVNFLLMPFLYDTM 199 (459)
T ss_pred hceeeeeecHHHHHHH
Confidence 8887777777776553
No 138
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.12 E-value=2.5e-10 Score=122.15 Aligned_cols=169 Identities=9% Similarity=0.010 Sum_probs=141.5
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.++..+...++...++.....+++.|++ ++|.+..+.+.+.++..+...+..+++|++.|| +|+|+++.++.++..+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r-~g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQN-CSARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhh-CCHHHHHHHHHHHHHH
Confidence 44566677777778888888899999985 599999999999999999999999999999999 5999999999999998
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
..++.+.+. +.+.+++...+.|+..|...++...++.+. |+
T Consensus 283 ------------~~~~~~~~~--------------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~ 323 (382)
T TIGR00902 283 ------------RWAIIGAIE--------------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PG 323 (382)
T ss_pred ------------HHHHHHhHh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CH
Confidence 776655543 677888899999999999999999999987 76
Q ss_pred CCcccccchhhhhhHHH-HHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYY-TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
++ |+++++.+. ....+|..+++.++|++.|..|+ ..|.+.+++.++++++
T Consensus 324 ~~------~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 324 SE------IAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred hh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 44 889999986 45689999999999999999986 5566666655555444
No 139
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.11 E-value=2.1e-10 Score=132.14 Aligned_cols=134 Identities=8% Similarity=0.042 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCc
Q 007862 57 NILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQ 136 (587)
Q Consensus 57 ~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (587)
+...+..++..++.+++|+++|| +|||++++++.++.++ +.+++++..
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr-~GRr~~l~~~~~lsai------------~~ll~~~~~------------------- 646 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDK-IGRLRMLAGSMVLSCI------------SCFFLSFGN------------------- 646 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH------------HHHHHHHHc-------------------
Confidence 33455667888999999999999 6999999999998888 666555543
Q ss_pred ccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 137 CKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 137 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
+...+++.+++.++..++..+...++++|++|++. |++++++.+...++|++++|.+++++.+. +.
T Consensus 647 -------s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~ 712 (742)
T TIGR01299 647 -------SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TK 712 (742)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh
Confidence 33446666778888888888999999999999854 99999999999999999999999988764 45
Q ss_pred hhHHHHHHHHHHHHHHHHHh
Q 007862 217 VIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 217 ~~~f~i~~~~~~~~~~~~~~ 236 (587)
..+|.+.+++.+++.++.+.
T Consensus 713 ~~pf~i~a~~lll~~ll~~~ 732 (742)
T TIGR01299 713 AAPILFASAALACGGLLALK 732 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 67787777666665554443
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.10 E-value=3.2e-10 Score=122.45 Aligned_cols=159 Identities=8% Similarity=-0.002 Sum_probs=128.8
Q ss_pred hhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEE
Q 007862 33 TIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLT 112 (587)
Q Consensus 33 ~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 112 (587)
..+....++.|+++.+|.+..+.+++..+..++..++.+++|+++|| .++++++.++.++..+ +.++
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~-~~~~~~l~~~~~~~~~------------~~~~ 305 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHS-ARPGLLMLLSTLGSFL------------AVGL 305 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhc-cCcchHHHHHHHHHHH------------HHHH
Confidence 34566778889888899999999999999999999999999999999 4888888888877777 6554
Q ss_pred EeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHH
Q 007862 113 VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWY 192 (587)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 192 (587)
..+.. +.....+..++.|++.+...+...+++.|.+|++. |++.++++
T Consensus 306 ~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 353 (417)
T PRK10489 306 FGLMP--------------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLW 353 (417)
T ss_pred HHccc--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHH
Confidence 44433 45556777788888888877888888899998744 99999999
Q ss_pred HHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 193 YTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 193 ~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+...++|..+||.+.|++.+.+|++..|.+.+...++..++...
T Consensus 354 ~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 354 TAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988887766554444444333
No 141
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.10 E-value=2.9e-10 Score=121.40 Aligned_cols=160 Identities=13% Similarity=0.169 Sum_probs=122.8
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccc
Q 007862 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQG 107 (587)
Q Consensus 28 ~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 107 (587)
+..+.+.....+++.|++ +.|.+.++.+.+.++..++..++.++.|+++|| +|||+++.++..+..+
T Consensus 211 ~~~~~~~~~~~~lp~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~l~~~~~~~~~----------- 277 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLN-HQGMSDASIGFWMALLVSAGILGQWPIGRLADR-FGRLLVLRVQVFVVIL----------- 277 (381)
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-cCcHHHHHHHHHHHHH-----------
Confidence 333444445566787876 469999999999999999999999999999999 5999999888877776
Q ss_pred cceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhh
Q 007862 108 KGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 187 (587)
Q Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 187 (587)
+.+... . . ...+..+.+.+++.+...|+....+.|..|+++ ++.
T Consensus 278 -~~~~~~--~--------------------------~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~ 321 (381)
T PRK03633 278 -GSIAML--S--------------------------Q-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVA 321 (381)
T ss_pred -HHHHHh--h--------------------------h-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHH
Confidence 543221 1 1 123345667777777888999998899887643 667
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 188 FFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 188 ~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
..+.+....++|.++||.++|++.|+.+|++.|.+.+...+++.+..+.
T Consensus 322 ~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 322 MNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 7777778889999999999999999999999999877776655544433
No 142
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.09 E-value=6.9e-10 Score=121.79 Aligned_cols=172 Identities=16% Similarity=0.128 Sum_probs=132.9
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc-ccchhhhhHHH--HHHH
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY-IGRFKTITFAS--IAAI 95 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~-~Gr~~~~~~~~--~~~~ 95 (587)
++..+...++..++++....+++.|+. ++|++..+++++.++..++..++.+++|+++||. +++|+..+++. ++..
T Consensus 243 ~~~~~~~~~l~~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 321 (455)
T TIGR00892 243 FLVYLSGNVIMFLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNG 321 (455)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHH
Confidence 444555566666777778888899975 5899999999999999999999999999999973 23344333332 3223
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.++..+.. +.+.+++.+++.|++.+...++..+++.|.+|
T Consensus 322 l------------~~ll~~~~~--------------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~ 363 (455)
T TIGR00892 322 L------------THLLCALAG--------------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVG 363 (455)
T ss_pred H------------HHHHHHHhc--------------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhh
Confidence 3 332222222 55667888999999999999999999999998
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccccc-chhhHHHHHHHHHHHHHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-~w~~~f~i~~~~~~~~~~~~~ 235 (587)
+++ +++.++++....++|..+||.++|++.+.. +|++.|++.++..+++.+...
T Consensus 364 ~~~------~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~ 418 (455)
T TIGR00892 364 AQR------FSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA 418 (455)
T ss_pred HHH------HhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence 755 899999999999999999999999999887 599999998877666655433
No 143
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.08 E-value=3.6e-10 Score=123.78 Aligned_cols=175 Identities=15% Similarity=0.071 Sum_probs=119.4
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccc--cchhhhh-HHHHHH
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI--GRFKTIT-FASIAA 94 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~--Gr~~~~~-~~~~~~ 94 (587)
.+|...+..++....++++..++|.|++++.|++..+++++...+.++..++.+++|+++|| + |||+... ....+.
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr-~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 254 LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMTLV 332 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCcchHHHHHHHHH
Confidence 34555566666677778888999999999999999999999999999999999999999999 6 4444322 222222
Q ss_pred HHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC
Q 007862 95 ILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 174 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 174 (587)
.+ +.+...+... .+....+....+.|.+..+..+....+..|.+
T Consensus 333 ~~------------~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 376 (452)
T PRK11273 333 TI------------ATIVYWLNPA------------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELA 376 (452)
T ss_pred HH------------HHHHHHHhcc------------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 22 2211111110 02233333444444433222222334567888
Q ss_pred CCCCcccccchhhhhhHHHHHHHHHHHH-HhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 007862 175 DATTDEGVKGINSFFNWYYTTFTVVILI-TQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 175 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i-~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
|++. |++++++.+...++|+.+ +|.+.|++.|..||+..|.+.....+++++...
T Consensus 377 p~~~------~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 377 PKKA------AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred Chhh------hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8755 999999999888888755 799999999999999999887776666655543
No 144
>PRK15075 citrate-proton symporter; Provisional
Probab=99.05 E-value=6.5e-10 Score=121.04 Aligned_cols=153 Identities=12% Similarity=0.022 Sum_probs=110.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccc
Q 007862 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVT 103 (587)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~ 103 (587)
...++....++.+..++|.|+++.+|++..+.+++..+..++..++.+++|+++|| +||||++.++.++..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr-~g~r~~~~~~~~~~~~~------ 317 (434)
T PRK15075 245 LMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR-IGRRPVLIAFTVLAILT------ 317 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHH------
Confidence 33344566677888889999998899999999998888889999999999999999 59999988765543320
Q ss_pred cccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCccccc
Q 007862 104 KYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 183 (587)
Q Consensus 104 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (587)
+......... ..+.........+.+++.|...+...++..|.+|++.
T Consensus 318 -----~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~----- 364 (434)
T PRK15075 318 -----AYPALSWLVA-----------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV----- 364 (434)
T ss_pred -----HHHHHHHHHc-----------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc-----
Confidence 1111111000 0022233344455566777777777788999999865
Q ss_pred chhhhhhHHHHHHHH-HHHHHhhhhhhcccccchh
Q 007862 184 GINSFFNWYYTTFTV-VILITQTVLVYIQDSVSWV 217 (587)
Q Consensus 184 ~r~~~~~~~~~~~~~-g~~i~~~~~~~i~~~~~w~ 217 (587)
|++++++.+...+. ++.++|.+.+++.|..|+.
T Consensus 365 -rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 365 -RTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred -cchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 99999997765554 5788999999999987853
No 145
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.05 E-value=1.4e-09 Score=117.26 Aligned_cols=175 Identities=10% Similarity=0.022 Sum_probs=127.3
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhh-HHHHHHHHh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTIT-FASIAAILL 97 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~-~~~~~~~~~ 97 (587)
++......++....+++...++|.|+ +++|++..+.+.+.....++..++.++.|+++|| +|||+.+. .+.+...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~l~~~~- 300 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFV-AELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK-LGWMNTVRWFGGVGCGI- 300 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHH-
Confidence 44555566677778888888999887 5699999999999999999999999999999999 59998764 33333333
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.+.+.+.... ...+....++..++.|++.++..|. .....|..|+
T Consensus 301 -----------~~~~l~~~~~~---------------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~- 346 (402)
T TIGR00897 301 -----------FTLALYYIPQH---------------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAPK- 346 (402)
T ss_pred -----------HHHHHHHHHHc---------------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCcc-
Confidence 22211111100 0013455566777788887776553 4455565442
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
.|++++++++...++|..++|.+.+++.+..||+..|++.++..+++.++.++
T Consensus 347 ------~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 347 ------HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999888777666655444
No 146
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.04 E-value=1.2e-09 Score=118.21 Aligned_cols=168 Identities=12% Similarity=0.036 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEee
Q 007862 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTL 115 (587)
Q Consensus 36 ~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 115 (587)
......+++.+++|++..+.++......++..++.+++|+++|| +|||+.+.+++++..+ +.++.++
T Consensus 302 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~------------~~~~~~~ 368 (481)
T TIGR00879 302 AIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR-FGRRPLLLIGAAGMAI------------CLFVLGI 368 (481)
T ss_pred ehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHH------------HHHHHHH
Confidence 33445556677889999889999999999999999999999999 6999999998887777 6555442
Q ss_pred eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHH
Q 007862 116 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 195 (587)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 195 (587)
...... . . ..+..+...+....+..+....+..+....+..|.+|+++ |+++.++....
T Consensus 369 ~~~~~~--~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~ 427 (481)
T TIGR00879 369 LGASFV--T----G---------SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAA 427 (481)
T ss_pred Hhhccc--C----C---------cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHH
Confidence 110000 0 0 0000022222222233333333345777777899999755 99999999999
Q ss_pred HHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhc
Q 007862 196 FTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 196 ~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
.++|.+++|.+.+++.+..+|++.|++.+++.+++.++.++.
T Consensus 428 ~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~ 469 (481)
T TIGR00879 428 NWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFF 469 (481)
T ss_pred HHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHhee
Confidence 999999999999999998899999988877766666655443
No 147
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.04 E-value=9.1e-10 Score=119.96 Aligned_cols=172 Identities=7% Similarity=-0.034 Sum_probs=115.2
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcccc--chhhh-hH---HHH
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG--RFKTI-TF---ASI 92 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G--r~~~~-~~---~~~ 92 (587)
++......++....++++..+++.|+.+++|++..+++...+++.++..++.+++|+++|| ++ ||+.. .. +.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 245 IWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDK-LFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCccHHHHHHHHHHH
Confidence 3444444455556666777889999989999999999999999999999999999999999 52 22222 22 111
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +...... . +........++.|++..+.........+|
T Consensus 324 ~~~~------------~~~~~~~-~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (434)
T PRK11663 324 LSVG------------SLWLMPF-A--------------------------SYVMQAACFFTIGFFVFGPQMLIGMAAAE 364 (434)
T ss_pred HHHH------------HHHHccc-c--------------------------cHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 1111 1111111 1 12222233333343222222223345678
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
.+|+++ |++..++.++..++|..++|.+.+++.+..||+..|++.++..+++.+..+.
T Consensus 365 ~~~~~~------~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 365 CSHKEA------AGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred cccHhh------HHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 887644 9999999999999999999999999999999999998887776665554443
No 148
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.03 E-value=1.1e-09 Score=120.77 Aligned_cols=182 Identities=16% Similarity=0.102 Sum_probs=146.8
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccch--hhhhHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRF--KTITFASIAA 94 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~--~~~~~~~~~~ 94 (587)
|.+..-++.-++.+=+...+......|.++++|++.++...+..+..+...++++++|++.|| +|.| ++++++++++
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r-~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR-FGPKTKRTLLISLILW 359 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHH
Confidence 455555666677788888899999999999999999999999999999999999999999999 6999 9999998877
Q ss_pred HHhhhcccccccccceEE-EeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 95 ILLAEHFVTKYQGKGMLT-VTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
.+. .... .++... .. .-.+.+.+++.-++.|+..|+.++.+-++.++.
T Consensus 360 ~~i-----------~~~g~~G~~~~-------~~-------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~L 408 (477)
T PF11700_consen 360 III-----------PLYGLFGFWPS-------FF-------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRL 408 (477)
T ss_pred HHH-----------HHHHHHHhhhc-------cc-------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 441 1111 111110 00 012456677777899999999999999999999
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHHHHh
Q 007862 174 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~~~~ 236 (587)
.|+.+ .+.+|++|.++.-..+.+||.+.+.+.+..| .|.++....++.++++++++.
T Consensus 409 iP~g~------e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 409 IPPGR------EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred CCCch------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 99865 7999999999999999999999999998876 788888777777777766544
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.03 E-value=1.4e-09 Score=120.70 Aligned_cols=180 Identities=11% Similarity=0.064 Sum_probs=129.8
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHH-HHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILN-IWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~-~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.+..+...++..++.+......++|+.+++|+|..+.+++.. ...++..++.+++|+++|| +||||.+.++.++..+
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr-~g~~~~l~i~~~l~~l- 301 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQR-LSLFRALMIFGILQGV- 301 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH-
Confidence 344444455666666666778888988889999999999875 5567899999999999999 5999988877665554
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.+........+ .+...+....++..+..|...+...++..+..+++
T Consensus 302 -----------~~l~~~~l~~~~----------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~ 348 (491)
T PRK11010 302 -----------SNAGYWLLSITD----------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKS 348 (491)
T ss_pred -----------HHHHHHHHHhcc----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 322111101000 03333444555555555555566677788888875
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
. +++.+++.+...++|..+++.+.|++.|..||+..|.+..++.+.++++.+..++
T Consensus 349 ~------~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 349 F------SATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred C------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 7888999999999999999999999999999999999888888877776655443
No 150
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.03 E-value=5.5e-10 Score=121.13 Aligned_cols=159 Identities=16% Similarity=0.166 Sum_probs=128.8
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHH-hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccc-hhhhh
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLK-EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR-FKTIT 88 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr-~~~~~ 88 (587)
..+.+||.++....+.++..+.+.......-+|+++ |.+.+.+..|+++++..++..++.+..|+.+.|. |+ |+.++
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli 106 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLI 106 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHH
Confidence 557899999999999999999998888888899776 6889999999999999999999999999999994 76 88888
Q ss_pred HHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccc
Q 007862 89 FASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIP 168 (587)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 168 (587)
.+.++.++ |.++.......| +....+++.+|++.|+|.|.. ...-.
T Consensus 107 ~s~ii~~~------------g~llY~~l~~~~---------------------~~~~y~mL~~R~l~Gvg~~n~-a~lR~ 152 (488)
T KOG2325|consen 107 VSFLIAII------------GNLLYLALAYVP---------------------NGVKYLMLVARILTGVGVGNF-AVLRA 152 (488)
T ss_pred HHHHHHHH------------HHHHHHHHHhcc---------------------cchHHHHHHHHHHcCcCcccH-HHHHH
Confidence 88888888 888763323222 125688999999999998874 45778
Q ss_pred cccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhc
Q 007862 169 FGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 210 (587)
Q Consensus 169 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i 210 (587)
|++|.-..++ |.++++....+..+|..+||.+...+
T Consensus 153 Y~a~~s~~~d------R~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 153 YIADASTVED------RPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHhccCccc------hHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 8888655544 88888887777777777777765443
No 151
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.02 E-value=9.3e-09 Score=107.25 Aligned_cols=81 Identities=9% Similarity=-0.129 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc---------
Q 007862 143 MQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS--------- 213 (587)
Q Consensus 143 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~--------- 213 (587)
.++..++++.+++|.|.+..+++.++++++..|+++ +.+.+++......+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 378899999999999999999999999999998754 88899999999999999999999987632
Q ss_pred -------cchhhHHHHHHHHHHH
Q 007862 214 -------VSWVIGFGIPTVLMIG 229 (587)
Q Consensus 214 -------~~w~~~f~i~~~~~~~ 229 (587)
..|+++|++.+.+..+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~ 104 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAV 104 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH
Confidence 4689998855444333
No 152
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.02 E-value=1.1e-09 Score=115.52 Aligned_cols=178 Identities=15% Similarity=0.093 Sum_probs=140.4
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccc-cchhhhhHHH-HHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-GRFKTITFAS-IAA 94 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-Gr~~~~~~~~-~~~ 94 (587)
|.+|++-...++-.+.=|++.-+.|+|+.++.|+|..++++..+.|=.+...+++++||+|||.+ |||...-+-+ ++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 66788888888888888999999999999999999999999999999999999999999999998 7776544333 333
Q ss_pred HHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC
Q 007862 95 ILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 174 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 174 (587)
++ +.+..-++. +.+..+.......+|+-.-+..-.+-....|..
T Consensus 332 ~~------------~~~~~w~~~------------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~ 375 (448)
T COG2271 332 TA------------SLVLYWLAP------------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFV 375 (448)
T ss_pred HH------------HHHHHHcCC------------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccc
Confidence 33 333333333 125677777777788776666666666778888
Q ss_pred CCCCcccccchhhhhhHHHHHHHH-HHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 175 DATTDEGVKGINSFFNWYYTTFTV-VILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 175 ~~~~~~~~~~r~~~~~~~~~~~~~-g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
|++. -|++.++...+..+ |+..+....+++.|.+||...|.+-.+..+++.++++.
T Consensus 376 pK~A------aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 376 PKKA------AGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred cHhh------ccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 8754 89999999999988 99999999999999999999998866666655555433
No 153
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=1.4e-09 Score=114.67 Aligned_cols=185 Identities=14% Similarity=0.003 Sum_probs=146.9
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
-|..|...+..+..--++.++...++.|++.+++.++.+++.+...+.....+..+++|++||| +|.+|+.++..+.++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR-~Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR-IGGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh-ccchhHHHHHHHHHH
Confidence 4677888888888888889999999999999999999999999999999999999999999999 599999999999888
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.....+..... .+ ..+...++..-+.+++..|.-......++...|+
T Consensus 296 ~------------~~~~l~~~~~~~--------~~-----------~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~ 344 (417)
T COG2223 296 L------------AAALLSLFLTGF--------GH-----------GGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFP 344 (417)
T ss_pred H------------HHHHHHcccccc--------cc-----------CcchHHHHHHHHHHHHHhccCcchheeechHHHH
Confidence 8 666555432100 00 0134445555555666666666667777888887
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHHHHhccc
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
++ -+...++.....++|+..-|...+...+..| +...|++.....+++.++.+..+.
T Consensus 345 ~~-------~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 345 KE-------TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred hh-------hhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 52 6888999999999999999999888888777 889999888888777776555443
No 154
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.00 E-value=1.8e-09 Score=117.54 Aligned_cols=168 Identities=14% Similarity=-0.024 Sum_probs=109.6
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhccccccc
Q 007862 27 TFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQ 106 (587)
Q Consensus 27 ~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~ 106 (587)
++....+|++..++|.|+.+++|.+..+.+...++...+..++.++.|+++|| +|||+++.++.++..+
T Consensus 253 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr-~grr~~~~~~~~~~~~---------- 321 (432)
T PRK10406 253 AAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK-IGRRTSMLCFGSLAAL---------- 321 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH----------
Confidence 34467788899999999999999999999998888888888999999999999 6999988877665433
Q ss_pred ccceEEEee-eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccch
Q 007862 107 GKGMLTVTL-TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGI 185 (587)
Q Consensus 107 ~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 185 (587)
....... ... ..+....+....+..++.+...+....+..|.+|++. |
T Consensus 322 --~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r 370 (432)
T PRK10406 322 --FTVPILSALQN-----------------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------R 370 (432)
T ss_pred --HHHHHHHHHHc-----------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------c
Confidence 2111110 010 0011111111122223333334556677899999865 9
Q ss_pred hhhhhHHHHHHHH-HHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 186 NSFFNWYYTTFTV-VILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 186 ~~~~~~~~~~~~~-g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
++++++.|...++ .+...|.+.+++.+...|...+.+.++..+++++..++
T Consensus 371 ~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 371 ALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred chhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999977654 34458888886643333555666555555555444443
No 155
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=9.9e-09 Score=109.02 Aligned_cols=162 Identities=13% Similarity=0.047 Sum_probs=117.5
Q ss_pred HHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeecc
Q 007862 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAW 118 (587)
Q Consensus 39 ~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 118 (587)
....|..+.|| |...+-|...+|..++......+-|+.|+ +|-|-+.+++.++.++ |...=..+..
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk-~GLR~a~llgt~ln~i------------Ga~Ir~iss~ 131 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDK-FGLRTALLLGTVLNGI------------GAWIRLISSL 131 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcc-cchHHHHHHHHHHHHH------------HHHHhhhccC
Confidence 34457778888 88888999999999999999999999999 5999999999999999 8776554432
Q ss_pred CCCCCCCCCCCCCCCCCcccCCcchhHH--HHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHH
Q 007862 119 LPQLHPPKCDVAKPPFGQCKSANSMQLG--VLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 196 (587)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 196 (587)
|.+.+ +++ +...|-.+.+..+-.+.....-..+-+|++++ |..+-..-.+..
T Consensus 132 -p~v~~-------------------~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n 185 (480)
T KOG2563|consen 132 -PFVPP-------------------LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGN 185 (480)
T ss_pred -ccccc-------------------cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcc
Confidence 21111 333 66788888888887777766677777899877 888888777777
Q ss_pred HHHHHHHhhhhhhcccc------cchhh--HHHHHHHHHHHHHHHHHhccce
Q 007862 197 TVVILITQTVLVYIQDS------VSWVI--GFGIPTVLMIGAIILFLVGKKL 240 (587)
Q Consensus 197 ~~g~~i~~~~~~~i~~~------~~w~~--~f~i~~~~~~~~~~~~~~~~~~ 240 (587)
.+|.+++.++...+..+ .+|.. .|....++..+.++++.+.+++
T Consensus 186 ~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 186 PLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTK 237 (480)
T ss_pred hHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 78888887777766543 34654 3554444444444555554443
No 156
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.96 E-value=5.6e-09 Score=110.91 Aligned_cols=178 Identities=13% Similarity=0.073 Sum_probs=145.2
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+.++..+...++..-+.|...+++-+++++..|+|.+..++++..+.++..++.+++|+++|| +.|+++.....+..+
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 456778888888889999999999999999999999999999999999999999999999999 888888888777777
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
..+.+.+... +........++.|++.+.....-..-.++..|+
T Consensus 289 ------------~~l~l~~~~~-------------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~ 331 (394)
T COG2814 289 ------------ALLALTFTGA-------------------------SPALALALLFLWGFAFSPALQGLQTRLARLAPD 331 (394)
T ss_pred ------------HHHHHHHhcc-------------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCC
Confidence 5555555442 445555555556666665555555555553333
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccce
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKL 240 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 240 (587)
.++.+.+++...+|+|..+|..++|.+.|++|+....++.+++.++++++.+...+.
T Consensus 332 -------~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 332 -------AADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred -------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 378999999999999999999999999999999999999999999888887665543
No 157
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.96 E-value=4e-08 Score=107.28 Aligned_cols=161 Identities=15% Similarity=0.106 Sum_probs=114.3
Q ss_pred HHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc--cc-chhh-hhHHHHHHHHhhhcccccccccceEEEee
Q 007862 40 FMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY--IG-RFKT-ITFASIAAILLAEHFVTKYQGKGMLTVTL 115 (587)
Q Consensus 40 ~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~--~G-r~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 115 (587)
...|+++++|+++++.....+...+--.+ -++.|.++|-+ +| |||- ++++.++..+ +.+.+++
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~------------~~~~~~~ 78 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAV------------SALVLAL 78 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHH------------HHHHHHh
Confidence 44578899999999988766665554444 46679999984 12 4444 4455555533 3333332
Q ss_pred eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHH
Q 007862 116 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 195 (587)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 195 (587)
... ...+.....+..++..+|....-.++-+.++|....+. +.|+...++.+..
T Consensus 79 ~~~----------------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p----~~~g~lqS~~~~~ 132 (433)
T PF03092_consen 79 LPA----------------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREP----ESRGDLQSFVWGV 132 (433)
T ss_pred ccc----------------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC----chhHHHHHHHHHH
Confidence 221 01134455667788899999999999999999886543 2388999999999
Q ss_pred HHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 196 FTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 196 ~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
.++|.+++..++|++.+..++++.|.+...+..+.++..++..+
T Consensus 133 ~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 133 RSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999987766666554444433
No 158
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.96 E-value=3e-09 Score=115.94 Aligned_cols=180 Identities=14% Similarity=0.035 Sum_probs=120.1
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH-
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL- 96 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~- 96 (587)
.++......++.....+++..++|.|++++.|+|..+++++..+..+...++.+++|+++|| +|+++....+..+..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccHHHHHHHHHH
Confidence 34555556666667778888999999999999999999999999999999999999999999 5765433333222111
Q ss_pred -hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 97 -LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 97 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
. +.+...+... .+........++.|++..+..........|.+|
T Consensus 331 ~~-----------~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 375 (438)
T TIGR00712 331 TI-----------AVIVYWMNPA------------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAP 375 (438)
T ss_pred HH-----------HHHHHHhcCC------------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcC
Confidence 0 1111111110 022222333344444332222222235678888
Q ss_pred CCCcccccchhhhhhHHHHHHHHHH-HHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVI-LITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~-~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
+++ |+++.++++...++|+ +++|.+.|++.+..||...|.+.....+++++..++..+
T Consensus 376 ~~~------~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 376 KKA------AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred hhh------eeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 755 9999999998888874 789999999999999999998877666666665554443
No 159
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.96 E-value=9.7e-11 Score=130.75 Aligned_cols=202 Identities=15% Similarity=0.154 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
..+....+-....++.......-+.++++++.++.|++.+.+-++..+..++..|+++|. -|-|-+-++.+++.+
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~---- 80 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGL---- 80 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHH----
Confidence 333333333366677777777789999999999999999999999999999999999994 899999999999999
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCC-----CCCCCCcc-------------------cCCcchhHHHHHHHHHHHH
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDV-----AKPPFGQC-------------------KSANSMQLGVLVMGLGLLS 156 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~g 156 (587)
|.++.++-..+..-+.+.... ...+.-.| +...+.-+.+++++.++.|
T Consensus 81 --------g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~G 152 (539)
T PF03137_consen 81 --------GSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIG 152 (539)
T ss_dssp -------------------------------------------------------------------------------S
T ss_pred --------HHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHh
Confidence 999888765543322211100 00001111 2222233578899999999
Q ss_pred hccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc---------------------cc-
Q 007862 157 IGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD---------------------SV- 214 (587)
Q Consensus 157 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~---------------------~~- 214 (587)
+|....++...+|+=|-.++++ -...+++++....+|.++|..+++.... +.
T Consensus 153 iG~~pl~tLG~tYiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvG 226 (539)
T PF03137_consen 153 IGATPLYTLGITYIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVG 226 (539)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred ccccCCccceeeeecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHH
Confidence 9999999999999999988755 7888999999999999999999887531 02
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcccee
Q 007862 215 SWVIGFGIPTVLMIGAIILFLVGKKLY 241 (587)
Q Consensus 215 ~w~~~f~i~~~~~~~~~~~~~~~~~~~ 241 (587)
.|...|.+.+++.++..+.++...|+.
T Consensus 227 AWWLGfli~g~~~~l~aipl~~FPk~l 253 (539)
T PF03137_consen 227 AWWLGFLICGILLFLSAIPLFFFPKKL 253 (539)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 388888887776666655555544443
No 160
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.93 E-value=6.9e-09 Score=103.72 Aligned_cols=168 Identities=14% Similarity=0.087 Sum_probs=137.3
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
+.....+|.+..++++..++.+=....-+.++++.+|+|..+++.+.+...+......++.|.++||+ ||+-....+.+
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~ 338 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC 338 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence 34556789999999999999988888899999999999999999999999999999999999999995 99998888877
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..++ +...+.++.+ .-+.+..++|+.+...-....+.++-
T Consensus 339 ~~tl~-----------~H~~l~Ft~l----------------------------sPy~~m~~lGLsysllAcslWP~va~ 379 (459)
T KOG4686|consen 339 ILTLL-----------GHSGLFFTFL----------------------------SPYTSMTFLGLSYSLLACSLWPCVAS 379 (459)
T ss_pred HHHHH-----------HhhhHHhhhc----------------------------cHHHHHHHHhhhHHHHHHHHhhhhhh
Confidence 76664 5555555442 23566677788777766667788888
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc---hhhHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS---WVIGFGIPTVL 226 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~---w~~~f~i~~~~ 226 (587)
..|+++ .|++++..+...|+|-++-|++.|.|.|+-| |--.|.+....
T Consensus 380 ~vpE~q------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~ 430 (459)
T KOG4686|consen 380 LVPEEQ------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGL 430 (459)
T ss_pred hCCHHH------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHH
Confidence 888866 9999999999999999999999999998644 54455554443
No 161
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.91 E-value=8.9e-09 Score=113.75 Aligned_cols=164 Identities=14% Similarity=0.102 Sum_probs=110.0
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchh-------hhhHHHHHHHHhhhc
Q 007862 28 FERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFK-------TITFASIAAILLAEH 100 (587)
Q Consensus 28 ~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~-------~~~~~~~~~~~~~~~ 100 (587)
+.....+.+..+++.|+.+++|++..+++.+..+..++..++.+++|+++|| +|||+ ...++.++..+
T Consensus 263 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr-~~~r~~~~~r~~~~~~~~~l~~i---- 337 (476)
T PLN00028 263 YSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDV-AARRFGMRGRLWALWIVQTLGGV---- 337 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHhcCcchhHHHHHHHHHHHHH----
Confidence 3334445566778899999999999999999999999999999999999999 58762 22222222222
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
..++..... +....+...++.+++.++..+...+++.+..|
T Consensus 338 --------~~~~~~~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----- 378 (476)
T PLN00028 338 --------FCIWLGRAN--------------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR----- 378 (476)
T ss_pred --------HHHHhcccc--------------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-----
Confidence 222222221 33334445555666665555556666666544
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhcc
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGK 238 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~ 238 (587)
+.|+...++.....++|+.+++.+.+ ..+..+|+.+|.+.+++.+++.++.++.+
T Consensus 379 --~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 379 --RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred --hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 23889999887777888887777654 33445799999988877777766655543
No 162
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.90 E-value=1.2e-08 Score=112.05 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=111.1
Q ss_pred HHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccC
Q 007862 40 FMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWL 119 (587)
Q Consensus 40 ~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 119 (587)
..+++.+++|++..+..+......+...++.+++|+++|| +|||++++++.++..+ +.+.+......
T Consensus 293 ~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~r~~~i~~~~~~~v------------~~~~l~~~~~~ 359 (479)
T PRK10077 293 YAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK-FGRKPLQIIGALGMAI------------GMFSLGTAFYT 359 (479)
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHhHHHHHH------------HHHHHHHHHhc
Confidence 3345567889988877877777888888999999999999 5999999999998888 66555432110
Q ss_pred CCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccc-ccccccccccccCCCCCcccccchhhhhhHHHHHHHH
Q 007862 120 PQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGG-IRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 198 (587)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 198 (587)
+ ... .......++.+++.+. ..|+...++.|.+|+++ |++++++.+...++
T Consensus 360 ~---------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~ 411 (479)
T PRK10077 360 Q---------------------APG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWI 411 (479)
T ss_pred C---------------------ccc-HHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHH
Confidence 0 001 1223333444444433 34778899999999755 99999999999888
Q ss_pred HHHHHhhhhh------hcccccchhhHHHHHHHHHHHHHHHHHhc
Q 007862 199 VILITQTVLV------YIQDSVSWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 199 g~~i~~~~~~------~i~~~~~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
|..+++.+.+ ++.+..+|++.|++.++..+++.++.++.
T Consensus 412 g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (479)
T PRK10077 412 ANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKF 456 (479)
T ss_pred HHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhc
Confidence 8888755544 44567889988888776666665554443
No 163
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.90 E-value=4.2e-09 Score=109.82 Aligned_cols=161 Identities=12% Similarity=0.050 Sum_probs=120.2
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHH--hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLK--EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~--~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
..+......++.-.+--++..+++.|+.+ .+|++..+++...+.+.++..++.+++++++|| +|+||++.++.++.+
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r-~g~~~~l~~~~~l~~ 219 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPM-ISQGRYLAFNAFLAV 219 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHH
Confidence 33433333333333445677789999985 379999999999999999999999999999999 699999998888877
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +.++..... +.. ...+..+.|++.+.+.|...+...+.+|
T Consensus 220 ~------------~~~l~~~~~--------------------------~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~ 260 (310)
T TIGR01272 220 L------------LSIGAALTH--------------------------GYV-AMWFVLALGLFNSIMFPTIFSLALNALG 260 (310)
T ss_pred H------------HHHHHHHcC--------------------------CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 7 543322211 111 2235557899999999999999999888
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVL 226 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~ 226 (587)
++. +++.++. ....+|+++.|.+.|.+.|..|.+.+|+++.+.
T Consensus 261 ~~~-------~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 261 RHT-------SQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hhh-------hhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 632 3344443 567899999999999999999999998865544
No 164
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.90 E-value=5.6e-09 Score=113.08 Aligned_cols=163 Identities=11% Similarity=-0.033 Sum_probs=112.3
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHH-hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhh-hHHHHHHHH
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLK-EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI-TFASIAAIL 96 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~-~~~~~~~~~ 96 (587)
.+......++....++++..++|.|+++ ..|.+..+++.......++..++.+++|+++|| +|||+.. .+..++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr-~~~r~~~~~~~~~~~~~ 322 (412)
T TIGR02332 244 IMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR-LKERKHHTALPYLFAAA 322 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc-cCccHHHHHHHHHHHHH
Confidence 3445556667777788899999999976 357888999999999999999999999999999 6987753 333333333
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+..+..... +....+.+.++.++|.....+.......|.+|+
T Consensus 323 ------------~~~~~~~~~--------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 364 (412)
T TIGR02332 323 ------------GWLLASATD--------------------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISL 364 (412)
T ss_pred ------------HHHHHHhcC--------------------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccch
Confidence 321111111 111122222233344433334444445666776
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVL 226 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~ 226 (587)
++ |++++++.+...++|.+++|.+.+.+.+..| |++.|++..+.
T Consensus 365 ~~------~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 365 QA------RAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HH------HHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 44 9999999999999999999999999999874 99998866553
No 165
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.90 E-value=3.5e-08 Score=104.39 Aligned_cols=131 Identities=13% Similarity=-0.067 Sum_probs=91.8
Q ss_pred hhHHHHHHHHHHhhCC-------ChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccc
Q 007862 35 GLLANFMVYLLKEYHM-------NQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQG 107 (587)
Q Consensus 35 ~~~~~~~~yl~~~~~~-------s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~ 107 (587)
.++..+|+|+++..+- +++-.+...++..+...+..|.-|-++|+. |+||-.+..+....+.
T Consensus 33 vtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~---------- 101 (438)
T COG2270 33 VTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGII---------- 101 (438)
T ss_pred eeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHH----------
Confidence 3567789999987765 234556677777788888899999999995 8877766655554441
Q ss_pred cceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhh
Q 007862 108 KGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINS 187 (587)
Q Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 187 (587)
.+..+.++. +..++...++...+..++..+......++..|..++++ .++
T Consensus 102 -~~~~L~~i~-----------------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~r 151 (438)
T COG2270 102 -STFLLWFIP-----------------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGR 151 (438)
T ss_pred -HHHHHHHhC-----------------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCc
Confidence 444444433 11366777888888899999999999999999998865 444
Q ss_pred hhhHHHHHHHHHHHHHhhh
Q 007862 188 FFNWYYTTFTVVILITQTV 206 (587)
Q Consensus 188 ~~~~~~~~~~~g~~i~~~~ 206 (587)
..+.-|....+|+.+.-+.
T Consensus 152 iS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 152 ISGLGWALGYLGSVILLIF 170 (438)
T ss_pred ccccccccccccchHHHHH
Confidence 4455455556666655444
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.90 E-value=4e-09 Score=110.64 Aligned_cols=161 Identities=15% Similarity=0.095 Sum_probs=115.6
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHH-H-HHHH
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFA-S-IAAI 95 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~-~-~~~~ 95 (587)
.++.+....++.....+++..+++.|+.+++|++..+.+.+.....++..++.+++|+++||..+||+..... . .+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 3445555666666677778888999999999999999999999999999999999999999842333332221 1 1112
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +........ ..+.....+..++.|+..++..+....+..|.+|
T Consensus 297 ~------------~~~~~~~~~------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 340 (379)
T TIGR00881 297 V------------SLLVYWLNP------------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAP 340 (379)
T ss_pred H------------HHHHHhcCc------------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcC
Confidence 2 111111110 0133344555566666555666666678889998
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGF 220 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f 220 (587)
++. |+++++++....++|..++|.+.|++.+.+||++.|
T Consensus 341 ~~~------~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 341 KKA------AGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred cch------hHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 755 999999999999999999999999999999998765
No 167
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.90 E-value=5.1e-09 Score=111.90 Aligned_cols=170 Identities=10% Similarity=0.016 Sum_probs=114.8
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+..+...++.....+....++++|+.+.+|.+..+.+.+.....++..++.++.|+++|| +|||+.+.++.++..+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r-~~~~~~~~~~~~~~~i--- 277 (382)
T PRK10091 202 WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGR-YSPLRIAAVTDFIIVL--- 277 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccc-cCchhHHHHHHHHHHH---
Confidence 333333344444555556677888888899999999999999999999999999999999 6999999998887777
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+.++...... +.+.......+.++|.++..+.......+..++.
T Consensus 278 ---------~~~~~~~~~~-------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-- 321 (382)
T PRK10091 278 ---------ALLMLFFFGG-------------------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGG-- 321 (382)
T ss_pred ---------HHHHHHHHHh-------------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcc--
Confidence 6543332110 2233444444555655554443333333333321
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc-cchhhHHHHHHHHHHHHHHHH
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS-VSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~-~~w~~~f~i~~~~~~~~~~~~ 234 (587)
+.++.. ......++|..+||.++|++.|. .+|+..+.+.++...+++...
T Consensus 322 ---~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 322 ---ELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred ---hHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 123333 33567789999999999999885 789999988776655554443
No 168
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.89 E-value=3.7e-09 Score=110.50 Aligned_cols=154 Identities=16% Similarity=0.086 Sum_probs=124.7
Q ss_pred chhHHHHHHHHHHHHhhhhH-HHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 18 AMPYILGNETFERLATIGLL-ANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~-~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
.++......++....+++.. ...+.|.++.+|.+..+.+.+..+..++..++.++.|++.|| +|||+.+..+.++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~ 289 (365)
T TIGR00900 211 LLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRY-FKRMALMTGAIFVIGL 289 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHH
Confidence 44555555666666666666 566777776799999999999999999999999999999999 5999999888776666
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.....+.. . +.+.+++..++.|++.+...+....++.|.+|+
T Consensus 290 ------------~~~~~~~~~------------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 332 (365)
T TIGR00900 290 ------------AILVVGLTP------------------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPA 332 (365)
T ss_pred ------------HHHHHHhhc------------------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 544433322 0 256677888999999999999999999999997
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS 215 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~ 215 (587)
++ |++.+++++...++|..++|.++|++.|.+|
T Consensus 333 ~~------~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 333 EL------LGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 54 9999999999999999999999999987654
No 169
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=1.8e-07 Score=102.37 Aligned_cols=361 Identities=14% Similarity=0.093 Sum_probs=209.3
Q ss_pred hhHHHHHHHHHHHHhhhhH---HHHHHHHHHhhCCChhhHH-HHHH----HHHHHHHHHhhhhHHHhhccccchhhhhHH
Q 007862 19 MPYILGNETFERLATIGLL---ANFMVYLLKEYHMNQTSAA-NILN----IWGGVTNFAPLLGAFISDTYIGRFKTITFA 90 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~---~~~~~yl~~~~~~s~~~~~-~i~~----~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~ 90 (587)
+..+....+++.++.+... .+...+.....+.+..... .... ...+...+..++-|.++||+ |||..+.+.
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~ 98 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLP 98 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHH
Confidence 3445555566666665444 5566665555544322222 2222 23567888999999999995 999999999
Q ss_pred HHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccc
Q 007862 91 SIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFG 170 (587)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~ 170 (587)
++...+ ..+...+.. ++.++ ..=..-+.+++.....+++
T Consensus 99 ~~~~~l------------~~~~~~~~~---------------------------~~~~~--~~~l~g~~~~~~s~~~a~v 137 (463)
T KOG2816|consen 99 LFGTIL------------PALCLLFQG---------------------------YWFFL--LLGLSGGFSAIFSVGFAYV 137 (463)
T ss_pred HHHHHH------------hHHHHHHHH---------------------------HHHhh--hcccccchhhhhhhhhhhe
Confidence 998877 444433321 11111 1122344556667788889
Q ss_pred cccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeeeeCCCCCh
Q 007862 171 VDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVLVEPEGSI 250 (587)
Q Consensus 171 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (587)
+|....++ |...+++.......+..++|.+++++.+..|....|.++.++.+++++..++..|+...++.+..
T Consensus 138 adis~~~~------R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~- 210 (463)
T KOG2816|consen 138 ADISSEEE------RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD- 210 (463)
T ss_pred eeccchhH------HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-
Confidence 99888754 99999999999999999999999999999999999999999988888776665554322111100
Q ss_pred hhhHHHHHHHHHHhccccCCCCCCCCCccccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccce
Q 007862 251 FSGIGQVLVAAYKKRRLTLPQGQMDHHGIFYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQ 330 (587)
Q Consensus 251 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 330 (587)
...++ ...+++..+- .. .+++.. .
T Consensus 211 ----------------~~~~~---------------------~~~~~~~~~~----~~-------------~~~~~~--~ 234 (463)
T KOG2816|consen 211 ----------------ATLRE---------------------LTPGSLDSSH----VA-------------DAFQSL--T 234 (463)
T ss_pred ----------------ccccc---------------------cCCCcccchh----hh-------------hhhhhh--c
Confidence 00000 0000000000 00 000000 0
Q ss_pred eeehhhhhhhhhHHHHHHHHHHhhhcccc-ceeeeeeccccccCCCccccCc---ccccccchhhhhhhhhchhhhhHH-
Q 007862 331 QVEEVKCLIKIIPIWAAGIISLTSISQQG-TFTVSQAMKMNRHLGPKFQIPP---GTVGVISMITIGLWLPFYDTVLVP- 405 (587)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~---~~~~~i~~i~~~l~~~l~~~l~~~- 405 (587)
+....|..+.++. ......+....+.. ..+++. +... ...+ +.+.....+...+.+.+ ..|
T Consensus 235 ~~~~~r~~l~l~l--~~~~~~~~~~~~~~~~~~~yl----~~~f----~w~~~~~s~~~~~~~~~~~i~~l~----~~~~ 300 (463)
T KOG2816|consen 235 KVGPDRLLLLLLL--VAFLSSLPEAGGASDVLLLYL----KAKF----GWNKKEFSDLLSLVSILGIISQLL----LLPL 300 (463)
T ss_pred ccCCCccchHHHH--HHHHHHHHHhcCceeEEEEEE----eeec----CcCHHHHHHHHHHHHHHHHHHHHH----HHHH
Confidence 1112222222221 11122222222211 111111 1111 1111 22222333333333332 222
Q ss_pred HhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHh
Q 007862 406 ALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNK 485 (587)
Q Consensus 406 l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~ 485 (587)
+.+.++.+ +.+..|+..-.+...+.++... .|......+......+..|..-+++..
T Consensus 301 l~~~l~~~-------~~i~lGl~~~~~~~~~~af~~~----------------~w~~~~~~v~~~~~~~~~pa~~s~~s~ 357 (463)
T KOG2816|consen 301 LSSILGEK-------RLISLGLLSEFLQLLLFAFATE----------------TWMMFAAGVVVALAGIVFPAIRAFASI 357 (463)
T ss_pred HHHHHhhh-------hHhhHHHHHHHHHHHHHHHhcc----------------chhhhHHHHHHHhhcchhHHHHhHHHh
Confidence 23334322 3678888888888888887632 234344445556667888999999999
Q ss_pred hCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007862 486 QFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVT 521 (587)
Q Consensus 486 ~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~ 521 (587)
....+.+|+..++......+.+.+++.+-..+...+
T Consensus 358 ~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 358 LVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred hcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 999999999999999999999999998877776544
No 170
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.89 E-value=6.6e-09 Score=111.05 Aligned_cols=166 Identities=7% Similarity=-0.027 Sum_probs=127.6
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.++..+...++....+.+...+++.|+. +.|.+..+.+.+.++..++..+...+.|++.|| +|+|+.+.++.++..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRR-WSARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHH
Confidence 34455555566666777777788888885 699999999999998888888999999999999 5999999999988887
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.++.+.+. +.+.+++..++.|++.+...+....+..+. ++
T Consensus 283 ------------~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~ 323 (382)
T PRK11128 283 ------------RWGLMGSTT--------------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PG 323 (382)
T ss_pred ------------HHHHHHhhh--------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CH
Confidence 665544433 667778889999999998888888877775 43
Q ss_pred CCcccccchhhhhhHHH-HHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYY-TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGA 230 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~ 230 (587)
++ +++.++.+. ....+|..+||.++|++.|..|+. .|++.+++.+++
T Consensus 324 ~~------~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~ 371 (382)
T PRK11128 324 SE------VIRLQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPA 371 (382)
T ss_pred hh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHH
Confidence 22 677888776 455778899999999999998874 455544444433
No 171
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.88 E-value=4.4e-09 Score=113.90 Aligned_cols=160 Identities=13% Similarity=0.016 Sum_probs=120.6
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.++......++..++++......+.|++..+| +..+.+++..+..++..++.+++|+++|| +|||+++.++.++.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~g~~~~~~~~~~~~~~- 299 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKK-FGRKILFAGGILLMVL- 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH-
Confidence 34455556666666666554444555544555 56677788888889999999999999999 5999999999888777
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.+...+... +...+++..++.+++.+...+...++++|..|.+
T Consensus 300 -----------~~~~~~~~~~-------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (437)
T TIGR00792 300 -----------GYLIFFFAGS-------------------------NLPLILVLIILAGFGQNFVTGLVWALVADTVDYG 343 (437)
T ss_pred -----------HHHHHHHcch-------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 6554433211 4455667778889999999999999999998754
Q ss_pred Cc-ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 178 TD-EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 178 ~~-~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
+. .+.+.++++++++.+...+|..+++.+.|++.+..||
T Consensus 344 ~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 344 EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 31 2345579999999999999999999999999876666
No 172
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.88 E-value=2.1e-08 Score=107.94 Aligned_cols=172 Identities=11% Similarity=-0.076 Sum_probs=125.0
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+.......+.....+......+.|+.+++|.+..+.++......++..++.++.|+++|| +|||+.+.++.++..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~--- 293 (406)
T PRK15402 218 VAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR-RPLRSLIRMGLWPMVA--- 293 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHH---
Confidence 333333334445555556667888888999999999988888888888999999999999 5999999998887776
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+.++..+..... ..+...++.+.++.++|.+...+.......+..| +
T Consensus 294 ---------g~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~-- 340 (406)
T PRK15402 294 ---------GLLLAALATVIS---------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-V-- 340 (406)
T ss_pred ---------HHHHHHHHHHcc---------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-c--
Confidence 665554422100 1144556788888999999887766665443322 2
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~ 232 (587)
.|++..+.+++...+|..+|+.+.+++.+..++....+...+..++.+.
T Consensus 341 ----~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 341 ----SKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred ----cccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999998887876655555544444433
No 173
>PRK10504 putative transporter; Provisional
Probab=98.87 E-value=1e-08 Score=112.45 Aligned_cols=158 Identities=11% Similarity=-0.048 Sum_probs=121.8
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.+...+...++...++.......+.|++..+|.+..+.+++.....++..++.++.|+++|| +|||+++.++.++..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r-~g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR-FGYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH
Confidence 345556666777777766556667777777899999999999988888888888999999999 5999999988887776
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.++..+... ..+...+.+..++.|++.+...+....+..+.+|+
T Consensus 340 ------------~~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 384 (471)
T PRK10504 340 ------------VSLLFMLVAL-----------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPD 384 (471)
T ss_pred ------------HHHHHHhccc-----------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 4433332210 01233345566777888888888888888888887
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
++ +++.++++++...+|..+|+.+++.+.+..++
T Consensus 385 ~~------~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 385 NL------ASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred Hh------ccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54 89999999999999999999999988766554
No 174
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.84 E-value=9.5e-09 Score=110.23 Aligned_cols=167 Identities=8% Similarity=0.021 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhh---CCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEY---HMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~---~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
+......++....+......++.|+...+ +.+....+.+.++..+...++.++.|++.|| +|||+.+.++.++..+
T Consensus 218 ~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r-~g~~~~l~~~~~l~~l 296 (396)
T TIGR00882 218 WMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR-IGAKNALLIAGTIMSV 296 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHH
Confidence 33333333333444444456778887766 5566778888888888889999999999999 6999999999888877
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+..+..... +.+.++...++.+++.+........+..+.+++
T Consensus 297 ------------~~~~~~~~~--------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 338 (396)
T TIGR00882 297 ------------RIIGSSFAT--------------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDV 338 (396)
T ss_pred ------------HHHHHHhcC--------------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 665444433 455667778888888765555555555665655
Q ss_pred CCcccccchhhhhhH-HHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNW-YYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAI 231 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~ 231 (587)
+ .+++.++. +.....+|..+++.++|++.|..||+..|.+.++...+..
T Consensus 339 ~------~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~ 388 (396)
T TIGR00882 339 R------LSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFT 388 (396)
T ss_pred c------eEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 3 36666666 4577899999999999999999999999988666654443
No 175
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.82 E-value=7e-08 Score=108.98 Aligned_cols=208 Identities=14% Similarity=0.168 Sum_probs=152.7
Q ss_pred CCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHH
Q 007862 14 GGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 93 (587)
..-|.++.++....+....+.+......+-+.+.++++.++.|+|.+.+-++..+...+..|.+-|. =|-|.+-++.++
T Consensus 93 ~~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~ 171 (735)
T KOG3626|consen 93 ANIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVL 171 (735)
T ss_pred cCcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhH
Confidence 3446677777777777777778888888899999999999999999999999999999999999994 888888888888
Q ss_pred HHHhhhcccccccccceEEEeeeccCCCCCC--------------------------CCCCCCCCCCCccc-CCcchhHH
Q 007862 94 AILLAEHFVTKYQGKGMLTVTLTAWLPQLHP--------------------------PKCDVAKPPFGQCK-SANSMQLG 146 (587)
Q Consensus 94 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~-~~~~~~~~ 146 (587)
+.+ |.++.++-.++..-+. ..|.+.+. -..|. ..++.-+.
T Consensus 172 m~l------------gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 238 (735)
T KOG3626|consen 172 MGL------------GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPE-NSKREKESTSYPFL 238 (735)
T ss_pred HHH------------HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCC-cccccccCCchhHH
Confidence 766 5544444321111000 00100000 00111 11222345
Q ss_pred HHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc--------------
Q 007862 147 VLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-------------- 212 (587)
Q Consensus 147 ~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-------------- 212 (587)
+++++.++.|+|...+.+...+|+=|-..+++ -...+++.+....+|.++|.+++++...
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~ 312 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITP 312 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCC
Confidence 88999999999999999999999999877644 7889999999999999999999988631
Q ss_pred ----c-cchhhHHHHHHHHHHHHHHHHHhcccee
Q 007862 213 ----S-VSWVIGFGIPTVLMIGAIILFLVGKKLY 241 (587)
Q Consensus 213 ----~-~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 241 (587)
+ ..|...|++.+.+.++..+.+++..+..
T Consensus 313 ~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~l 346 (735)
T KOG3626|consen 313 TDPRWIGAWWLGFLICGALLLFSAVPLFFFPKEL 346 (735)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 1 2388899998888877777766655544
No 176
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.82 E-value=9.8e-09 Score=114.04 Aligned_cols=164 Identities=15% Similarity=0.058 Sum_probs=104.9
Q ss_pred HHHHHhhhhHHHHHHHHHHhhCCChhhHHH------------HHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 28 FERLATIGLLANFMVYLLKEYHMNQTSAAN------------ILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 28 ~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~------------i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
+..+.+|++..++|.++ ++.|++..+.+. ...+..++..++.+++++++|| +|||++++++.++..
T Consensus 299 ~~~~~~y~~~~~~p~i~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr-~gRR~~l~~~~~~~~ 376 (502)
T TIGR00887 299 LLDIAFYGVNLNQKVIL-SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDI-IGRKPIQLMGFFILT 376 (502)
T ss_pred HHHHHHHccccccHHHH-HHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcchhHHHHHHHHHH
Confidence 34556778777777777 477887543221 1223334555677889999999 699999988887766
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ +..+.++..... + +...+.+..+...++..+..+....+.+|.+|
T Consensus 377 ~------------~~~~l~~~~~~~--------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p 422 (502)
T TIGR00887 377 V------------LFFVLGFAYNHL--------------------S--THGFLAIYVLAQFFANFGPNATTFIVPGEVFP 422 (502)
T ss_pred H------------HHHHHHHHHHhc--------------------c--hhHHHHHHHHHHHHHhcCCCchhhhhhhccCc
Confidence 6 444333321000 0 11111211122223333445666777899999
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc----------cchhhHHHHHHHHHHHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS----------VSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~----------~~w~~~f~i~~~~~~~~~~~ 233 (587)
++. |+++.++.+....+|++++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 423 ~~~------R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 423 TRY------RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred hhH------HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 855 99999999999999999999999998873 34455666666555555443
No 177
>TIGR00895 2A0115 benzoate transport.
Probab=98.81 E-value=8e-09 Score=109.27 Aligned_cols=145 Identities=10% Similarity=0.016 Sum_probs=112.4
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+......++....++.+..+++ ++.+++|.+..+.+.+.....++..++.+++|+++|| +|||+.+....+..+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~--- 327 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADR-LGPRVTALLLLLGAVF--- 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHH---
Confidence 3444455566666666666666 7788999999999999999999999999999999999 5999555444443333
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
..++..... +...++...++.|++.++..+...+++.|.+|+++
T Consensus 328 ---------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~- 371 (398)
T TIGR00895 328 ---------AVLVGSTLF--------------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI- 371 (398)
T ss_pred ---------HHHHHHHhh--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH-
Confidence 222211111 34556777788999999999999999999999755
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhc
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYI 210 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i 210 (587)
|++++++.+....+|..+||.++|++
T Consensus 372 -----~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 372 -----RATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999876
No 178
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.81 E-value=9.5e-09 Score=112.75 Aligned_cols=156 Identities=12% Similarity=0.017 Sum_probs=127.0
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.++......++..+.+++....++.|+++.+|++..+++++.....++..++.+++|++.|| +|||+++.++.++..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDK-IDPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCcHHHHHHHHHHHHH
Confidence 345555666777778888888899999999999999999999999999999999999999999 6999999999888877
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+..+..+... +..+...++...++.|+|.|...+.......+.+|+
T Consensus 334 ------------~~~~~~~~~~----------------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~ 379 (485)
T TIGR00711 334 ------------GFYWRAFTFT----------------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPP 379 (485)
T ss_pred ------------HHHHHhccCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 6655442111 011345566677889999998887777777788886
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS 213 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~ 213 (587)
++ |+++.+++....++|..+|+.+.+.+.++
T Consensus 380 ~~------~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 380 HK------IARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HH------HhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 99999999999999999999999888764
No 179
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.81 E-value=2.3e-08 Score=109.76 Aligned_cols=177 Identities=12% Similarity=0.006 Sum_probs=122.0
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhh--------h
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTI--------T 88 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~--------~ 88 (587)
+.++......++....++.+..++|.|+.+++|.+..+.+++..+..++..++.+++|+++|| +++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADF-LKSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHH
Confidence 446677777888888889999999999999999999999999999999999999999999999 4755332 1
Q ss_pred HHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccc
Q 007862 89 FASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIP 168 (587)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~ 168 (587)
.+..+... +......... . .+....++...+.+.+.++..+....
T Consensus 340 ~~~~~~~~------------~~~~~~~~~~-~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~ 384 (465)
T TIGR00894 340 NGIGGLGP------------GIFAYALPYL-S----------------------AAFYLTIIILTLANAVSSGPLAGVLI 384 (465)
T ss_pred HHHHHHHH------------HHHHHHHHHc-C----------------------CchHHHHHHHHHHHHHhhhhhhhhhh
Confidence 11111111 1000011000 0 02233344444555555555555555
Q ss_pred cccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc---cchhhHHHHHHHHHHHHHHHHHh
Q 007862 169 FGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS---VSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 169 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~---~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
...|..|. .++...++.....++|+.++|.+.+++.+. .+|...|.+.++..+++.++...
T Consensus 385 ~~~~~~~~-------~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 385 NSLDLAPR-------FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred chhhcChh-------HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 55565553 389999999999999999999999998764 34888998887777776655433
No 180
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.81 E-value=2.1e-08 Score=107.34 Aligned_cols=175 Identities=15% Similarity=0.040 Sum_probs=124.9
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHH-HHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGG-VTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~-~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
.++..+...++...+......+.++|+. |.|++..+.+++...... ...++.+++|++.|| +|+||++.++.++..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~-~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLV-DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR-AGLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHH-hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH
Confidence 3455566666777777777778888876 579999999999888765 556778999999999 5999999887766533
Q ss_pred hhhcccccccccceE-EEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 97 LAEHFVTKYQGKGML-TVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
..+ ......... ..+...+.....+.+++.|...+...+...+..+
T Consensus 287 ------------~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 333 (390)
T TIGR02718 287 ------------LALLWFAQAAFWL---------------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAG 333 (390)
T ss_pred ------------HHHHHHHHHHccc---------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 211 111111000 0022333444455566777777777777777766
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~ 232 (587)
++ +.+++.+++.....++|..++|.++|++.|..||+..|.+.+++.+++++
T Consensus 334 ~~-----~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 334 DG-----DQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred cc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 41 23899999999999999999999999999999999999887766655543
No 181
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.79 E-value=3.8e-08 Score=106.95 Aligned_cols=162 Identities=14% Similarity=0.063 Sum_probs=134.0
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.+...++..++..+++......++.|++..+|.+ ...+++..+..+...++.++.++++|| +|+||++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r-~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKR-FGKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH-ccceeehhhhHHHHHH
Confidence 56677778888888888877777777777778877 567788888899999999999999999 5999999999999999
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.++..+... .+.+.+++...+.|++.|...+...++++|..|.
T Consensus 303 ------------~~~~~~~~~~------------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~ 346 (428)
T PF13347_consen 303 ------------GFLLLFFLGP------------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDY 346 (428)
T ss_pred ------------HHHHHHHHHh------------------------hhHHHHHHHHHHhHhhhcccccccccccccchhh
Confidence 7776665431 1678888999999999999999999999999997
Q ss_pred CCcc-cccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 177 TTDE-GVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 177 ~~~~-~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
++.+ ++++.+..++.+.....++..+++.+.+.+.+..|+
T Consensus 347 ~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 347 DEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 5533 455678888999999999999999998887655443
No 182
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.78 E-value=2.7e-08 Score=107.46 Aligned_cols=142 Identities=13% Similarity=0.031 Sum_probs=102.6
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
+.+..+++.|+.+ .|.+..+.+.+.....++..++.+++|+++|| +|||+++..+.++..+ +.+..
T Consensus 248 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr-~~~~~~~~~~~~~~~~------------~~~~~ 313 (426)
T PRK12307 248 WPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADR-IGLKKTFSIGLLMSFL------------FIFPL 313 (426)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHH------------HHHHH
Confidence 4456678888765 69999999999999999999999999999999 6999999988877655 43322
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
..... .+...+....+..+++..+..+..+.++.|.+|++. |++++++.+
T Consensus 314 ~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~ 363 (426)
T PRK12307 314 FRIPQ------------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIY 363 (426)
T ss_pred HHHcc------------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHH
Confidence 21110 011111111222222333334556677889999754 999999999
Q ss_pred HHHHHHHHHHhhhhhhcccccchhhH
Q 007862 194 TTFTVVILITQTVLVYIQDSVSWVIG 219 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~~i~~~~~w~~~ 219 (587)
...++|..++|.+.+++.+..|+...
T Consensus 364 ~~~~~~~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 364 NLAATSGTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred HHHhHHHHHHHHHHHHHHHcccHHHH
Confidence 99999999999999999998886653
No 183
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.77 E-value=2e-08 Score=105.95 Aligned_cols=151 Identities=9% Similarity=0.070 Sum_probs=113.5
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccc-cchhhhhHHHHHHHHh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYI-GRFKTITFASIAAILL 97 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~-Gr~~~~~~~~~~~~~~ 97 (587)
.+.......+....+++...+++.|++ +.|.+..+.+.+.+...++..++.++.|+++|| + +||+++.++.++..+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~- 275 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILI-SHGASAATAGSLLALMQLAQAASALLIPALARR-VKDQRGIVAVLAVLQLV- 275 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhh-hccchHHHHHHHHHHHH-
Confidence 344444555666777888888998886 579999999999999999999999999999999 6 566677777777766
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.+.+.+... + ... ....+.|++.|...|...+.+.+..+++
T Consensus 276 -----------~~~~~~~~~~-------------------------~-~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~ 317 (355)
T TIGR00896 276 -----------GLCGLLFAPM-------------------------H-GLW-AWALVLGLGQGGAFPLALTLIGLRSRQA 317 (355)
T ss_pred -----------HHHHHHHhhh-------------------------h-HHH-HHHHHHHHhhhhHhHHHHHHHHHhccCH
Confidence 6544443221 1 111 1346789999999998877777665542
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS 215 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~ 215 (587)
+.++..+++.+...+++..++|.+.|++.|..|
T Consensus 318 -----~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 318 -----AQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 236788888888889999999999999988765
No 184
>PRK10054 putative transporter; Provisional
Probab=98.76 E-value=2.1e-08 Score=107.96 Aligned_cols=172 Identities=12% Similarity=0.056 Sum_probs=126.8
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHH--hhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLK--EYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAA 94 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~--~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 94 (587)
|..+......++..+.+.......+.|+.. +.+.+....+.+............++.|++.|| .+||+.+.++.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNA-ANIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHcc-CCchhHHHHHHHHH
Confidence 345555565666666655555566667653 445667777888888888777888899999999 59999999998877
Q ss_pred HHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC
Q 007862 95 ILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 174 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 174 (587)
.+ +.+...++.. +.+.+++...+.++|++...|+....+.+..
T Consensus 285 ~~------------~~~~~~~~~~-------------------------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~ 327 (395)
T PRK10054 285 VI------------GLVGFIFSGN-------------------------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIA 327 (395)
T ss_pred HH------------HHHHHHHcch-------------------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC
Confidence 77 6654443221 4555667788999999988898888899988
Q ss_pred CCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 175 DATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 175 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
|++. |+++++... ...+|..+||.++|++.|..|....|++.++...++.++
T Consensus 328 p~~~------~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (395)
T PRK10054 328 PPGM------KASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLL 379 (395)
T ss_pred Cccc------ceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHH
Confidence 8754 788887543 566899999999999999999888887755544444333
No 185
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.76 E-value=6.3e-08 Score=102.46 Aligned_cols=162 Identities=9% Similarity=0.053 Sum_probs=116.0
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
+.......+....++......+.|+.+++|.++.+.+.+.....++..++.+++|+++|| +|||+.+..+.++..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~~--- 284 (385)
T TIGR00710 209 WGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK-WGAKSLLRMGLILFAV--- 284 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHH---
Confidence 333444445555666677777888888999999999999999999999999999999999 5999999888777766
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+.+++......+ ......++....+.|+|.+...+.......|.+|+
T Consensus 285 ---------~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--- 331 (385)
T TIGR00710 285 ---------SAVLLEITAILG---------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH--- 331 (385)
T ss_pred ---------HHHHHHHHHHhc---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---
Confidence 554443322100 01334556667778899999999888888887763
Q ss_pred ccccchhhhhhHHHHHHHH-HHHHHhhhhhhcccccchhhHHHHH
Q 007862 180 EGVKGINSFFNWYYTTFTV-VILITQTVLVYIQDSVSWVIGFGIP 223 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~-g~~i~~~~~~~i~~~~~w~~~f~i~ 223 (587)
.+++..+.+...... |+..++. .+.+.+..+|...+...
T Consensus 332 ----~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 332 ----VAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLSCL 371 (385)
T ss_pred ----cchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHHHHH
Confidence 278899988877654 5555555 44666655666555443
No 186
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.75 E-value=5.5e-08 Score=104.73 Aligned_cols=170 Identities=13% Similarity=0.149 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHH-HHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWG-GVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~-~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
..+...++...+........+.|+.+++|++..+.+++..... ++..++.+++|++.|| +|||+.+.++.++..+
T Consensus 213 ~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r-~g~~~~l~~~~~~~~l--- 288 (402)
T PRK11902 213 ALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVR-LGLYRSLMLFGVLQAV--- 288 (402)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH---
Confidence 3333334444433333344556778889999999999887655 4578899999999999 6999998877776555
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHH----HHHHhccccccccccccccccCC
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGL----GLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
..+...+....+ .+.+.++... +..+++.+...+....++.+.+|
T Consensus 289 ---------~~l~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 337 (402)
T PRK11902 289 ---------SNLGYWVLAVTP----------------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS 337 (402)
T ss_pred ---------HHHHHHHHHhcC----------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 332221111000 0233334333 34566677778888888888777
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
++ .++++....+++..+++.++|++.|.+||+..|.+.+++.++++++.+
T Consensus 338 ~~----------~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 338 AT----------QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 53 234555555777776677899999999999999998887777665543
No 187
>PRK10133 L-fucose transporter; Provisional
Probab=98.74 E-value=4.1e-08 Score=107.32 Aligned_cols=165 Identities=14% Similarity=0.060 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHH-HHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhh
Q 007862 21 YILGNETFERLATIGLLANFMVYL-LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAE 99 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl-~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~ 99 (587)
..+...++...+.++...+++.|+ ++++|+++.++++....+.++..++.+++|++.|| +||||++..+.++..+
T Consensus 262 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r-~g~~~~l~~~~~~~~~--- 337 (438)
T PRK10133 262 WAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISR-FAPHKVLAAYALIAMA--- 337 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHH---
Confidence 344444555566666677888886 45789999999999999999999999999999999 5999999888777665
Q ss_pred cccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc
Q 007862 100 HFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD 179 (587)
Q Consensus 100 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 179 (587)
+.++..+.. +. ..+.+..+.|+|.+.+.|...+...+.++++
T Consensus 338 ---------~~~~~~~~~--------------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-- 379 (438)
T PRK10133 338 ---------LCLISAFAG--------------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-- 379 (438)
T ss_pred ---------HHHHHHHcC--------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh--
Confidence 443332222 11 1245567789999999999999999998753
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHH
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~ 233 (587)
.+.+.++.. ...+|+.++|.+.|++.+..| -+..|+++.+..+..+..
T Consensus 380 -----~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 380 -----TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred -----hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 234444443 344678888899999998887 788888777665554443
No 188
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.74 E-value=5.1e-08 Score=108.66 Aligned_cols=172 Identities=12% Similarity=0.068 Sum_probs=142.3
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
+..++...++..+....+...+|.+..+++|.+....|++.+++.++..++.++.+++.+| +++++.+..+.+++.+
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~-~~~~~lv~~~~~~~a~-- 296 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR-LSSRRLVLLASLLFAL-- 296 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhHHHHHHHHH--
Confidence 3444444555555555566778888889999999999999999999999999999999999 6999999999998888
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+.+.++++. +.+...+..++.|++.........+.+-+..|++.
T Consensus 297 ----------~~~~lal~~--------------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~ 340 (524)
T PF05977_consen 297 ----------ALLLLALSP--------------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV 340 (524)
T ss_pred ----------HHHHHhcch--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 777777765 66777888888898888888777777777788754
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
||+.++++.+..+.+..+|..+.|.+.+.+|-+..+.+.++..++..++.+
T Consensus 341 ------~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 341 ------RGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred ------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887776555554443
No 189
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.72 E-value=6.2e-08 Score=117.90 Aligned_cols=162 Identities=10% Similarity=0.030 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChh-hHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 20 PYILGNETFERLATIGLLANFMVYLLKEYHMNQT-SAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~-~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
+..+...++.....+.....++.|+.+.+|++.. +.+++..+..++..++.+++|+++|| +++++++.++.++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r-~~~~~~~~~~~~~~~~-- 311 (1146)
T PRK08633 235 WLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGR-HIELGLVPLGALGLAL-- 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCC-ceEccchhHHHHHHHH--
Confidence 3344444444555566777889999999999999 99999999999999999999999999 5999999888887777
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+.+++.+.. +...+++..++.|++.++..+...+++.+.+|++.
T Consensus 312 ----------~~~~~~~~~--------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 355 (1146)
T PRK08633 312 ----------SLFLLPTAP--------------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE 355 (1146)
T ss_pred ----------HHHHHHHhh--------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc
Confidence 555544433 45667777888999999999999999999998865
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-ccchhhHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-SVSWVIGFGIPTVL 226 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-~~~w~~~f~i~~~~ 226 (587)
|++++++.++..++|.++++.+++.+.. .+++...|.+.+.+
T Consensus 356 ------rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 356 ------LGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred ------hhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999999999999888888776643 23455555554433
No 190
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.72 E-value=3.5e-08 Score=109.50 Aligned_cols=153 Identities=8% Similarity=-0.051 Sum_probs=124.5
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.+.......++...++++...+++.|+++.+|.|..+++.......++..++.+++|++.|| +|||+.+..+.++..+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~g~~~~~~- 337 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSR-LGLRLVATGGMALSAL- 337 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCchHHHHHHHHHHHH-
Confidence 34455566666777778888889999999999999999999999999999999999999999 5999999988888777
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+..++..... ..+.+......++.|+|.|...+.....+.+..|++
T Consensus 338 -----------~~~~l~~~~~-----------------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~ 383 (495)
T PRK14995 338 -----------SFYGLAMTDF-----------------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE 383 (495)
T ss_pred -----------HHHHHHHhcC-----------------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH
Confidence 6554332210 013344566778899999999988888888888875
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD 212 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~ 212 (587)
+ ++.+.+.+.+..++|..+|+.+.+.+.+
T Consensus 384 ~------~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 384 K------AAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred h------cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 8999999999999999999999988764
No 191
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.70 E-value=1.1e-07 Score=102.43 Aligned_cols=165 Identities=7% Similarity=-0.042 Sum_probs=118.3
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
++..+...++.....++...++++++.+++|++..+.+.+.....++..++.++.|++.|| .+|+ .+..+.++..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r-~~~~-~l~~~~~~~~~~- 294 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKR-SVKL-ALAGAPLVLAVS- 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhc-cchh-HHHHHHHHHHHH-
Confidence 3444444445555556666666555567889999999999999999999999999999999 4554 444443333330
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+.++..... +.+.+.+..++.|++.+...+.....+.+..|++
T Consensus 295 ----------~~~l~~~~~--------------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~- 337 (394)
T PRK10213 295 ----------ALVLTLWGS--------------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ- 337 (394)
T ss_pred ----------HHHHHHHhh--------------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-
Confidence 222222222 4456677888899999999998888888877642
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIG 229 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~ 229 (587)
+++..+.++...++|..+|+.++|++.|..|++..|...++..++
T Consensus 338 ------~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 338 ------AEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 456667777788999999999999999999998888876654433
No 192
>PRK09848 glucuronide transporter; Provisional
Probab=98.68 E-value=4.3e-08 Score=107.18 Aligned_cols=163 Identities=15% Similarity=0.093 Sum_probs=121.1
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.++......++...+++......+.|++..+|.+....++......++..++.++.++++|| +|+|+++.++.++..+
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r-~g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVAR-IGKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHH
Confidence 344555566666666666666666777777888877665555554456677889999999999 5999999999988777
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.+...+.. ..+.+.++...++.++|.+...+...++.+|..|.
T Consensus 307 ------------~~~~~~~~~------------------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~ 350 (448)
T PRK09848 307 ------------GYLLFFWVS------------------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEY 350 (448)
T ss_pred ------------HHHHHHHcC------------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 655444322 11455667778889999999999999999999886
Q ss_pred CCc-ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 177 TTD-EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 177 ~~~-~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
++- .+.+.++..++.+.+...+|..+++.+.+.+.+..||
T Consensus 351 ~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 351 GEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred hHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 542 2344568899999999999999999998887654444
No 193
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.66 E-value=1e-07 Score=116.13 Aligned_cols=182 Identities=8% Similarity=-0.067 Sum_probs=129.3
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.++..+...++..+..+++...++.|+.+.+|.+..+++++.+.+.++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 3445555555666667777888999999999999999999999999999999999999999984 777766655554443
Q ss_pred hhhcccccccccceEEEeee--c-cCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 97 LAEHFVTKYQGKGMLTVTLT--A-WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
+.+.+.+. . ..+........ .+. ...+.+.++++.++.|++.+...+...+++.+.
T Consensus 304 ------------~~~~l~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 362 (1140)
T PRK06814 304 ------------FGLDLAFASSSVPAEPAQLKSIL------VFL---SKRHGWRILIDLFGLAAAGGLYIVPLFAALQAW 362 (1140)
T ss_pred ------------HHHHHHhcccccccccccccchh------hhh---cccccHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Confidence 22211111 0 00000000000 000 001446677888889999999999999999999
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-ccchhhHHHHHHHH
Q 007862 174 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-SVSWVIGFGIPTVL 226 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-~~~w~~~f~i~~~~ 226 (587)
+|++. |++.++.+.+..++|..+++.+.+.+.+ ..++...|.+.+++
T Consensus 363 ~p~~~------~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 363 ANPAH------RARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred CCccc------ceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 99866 9999999999999999999999998874 45667666654443
No 194
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.63 E-value=8.5e-08 Score=101.47 Aligned_cols=172 Identities=15% Similarity=0.102 Sum_probs=137.8
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.+.+-+...++.+=+...+......|-..++|+++++...+.....+...++++++|++.|| +|-|++++++++++.+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~r-fg~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDER-FGSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCceeehHHHHHHHH
Confidence 466666777777777778888889999999999999999999999999999999999999999 6999999999999887
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
..+..-+.. ....+...=++.|...|+.++.+-++.++..|+
T Consensus 331 ------------~~~~~~~~~--------------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~ 372 (438)
T COG2270 331 ------------AALYLIFLE--------------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPK 372 (438)
T ss_pred ------------HHHHHHHcc--------------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCC
Confidence 433322222 112234444778999999999999999999998
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~ 233 (587)
++ -+++|++|.++...++.+||.+.+.+.+-.| -|..+..-.++..+++++
T Consensus 373 ~k------~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 373 GK------EGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred cc------ccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 65 7999999999999999999999999887654 466655444444444433
No 195
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.62 E-value=1.3e-07 Score=101.90 Aligned_cols=153 Identities=10% Similarity=0.020 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEee
Q 007862 36 LLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTL 115 (587)
Q Consensus 36 ~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 115 (587)
....+|.|+++..| ++.+.+++.++..+.......+.+++.||.++.++.+..+.++..+ +.++++.
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~------------~~~~l~~ 293 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSL------------SMFPIGM 293 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH------------HHHHHHH
Confidence 44567777766555 7788888888877766655555566655435767777788777777 6654444
Q ss_pred eccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHH
Q 007862 116 TAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTT 195 (587)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 195 (587)
+. +...+.....+.++|.+...|...+.+.|..|+++ |++.++++...
T Consensus 294 ~~--------------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~ 341 (400)
T PRK11646 294 VS--------------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLG 341 (400)
T ss_pred hh--------------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHH
Confidence 33 44455666678888988888999999999999865 99999999999
Q ss_pred HHHHHHHHhhhhhhccccc---c-hhhHHHHHHHHHHHHHHH
Q 007862 196 FTVVILITQTVLVYIQDSV---S-WVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 196 ~~~g~~i~~~~~~~i~~~~---~-w~~~f~i~~~~~~~~~~~ 233 (587)
.++|..+||.++|++.|.. + ....|.+..++.++..+.
T Consensus 342 ~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 342 LALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999998763 2 245555544444444433
No 196
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.62 E-value=1.6e-07 Score=102.75 Aligned_cols=185 Identities=14% Similarity=0.015 Sum_probs=124.8
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
..|......++..-+|.+....+|.|+++++. .........+..+...+..+++|+++|| +||+|++.++.++..+
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADR-iG~~~vl~~~~i~~~i- 328 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDK-FGGVRVTLINFIFMAI- 328 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchHHHHHHHHHHHH-
Confidence 45666666666666666677789999888763 3333333445567788999999999999 6999999999987777
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
+.....+.. |. .++.+...+....+.+.++.|.-......++.+.||+.
T Consensus 329 -----------~~~~~~l~l--p~------------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~ 377 (462)
T PRK15034 329 -----------FSALLFLTL--PG------------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQI 377 (462)
T ss_pred -----------HHHHHHHHh--cc------------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhh
Confidence 432211111 10 01225666666666666777777777888888888741
Q ss_pred Cc---------------ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc-cchhhHHHHHHHHHHHHHHHHHhc
Q 007862 178 TD---------------EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS-VSWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 178 ~~---------------~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~-~~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
+. ..+++-+...++......+|+++-|.+.+...+. .++...|++..+..++.+++.|..
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 378 TIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred hhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0112467788888888899888888776666554 457888888777777666665543
No 197
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.59 E-value=3.7e-06 Score=91.29 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=93.9
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHH
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWL 461 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~l 461 (587)
+....++-.+-+++-++..++ .+|.+ ..+.+..|+.+..+=++..+.. .++|..
T Consensus 409 Gv~~a~~~~gEI~~~ffs~kl----I~kiG-------Hv~v~~lgLa~~~~Rf~~~S~L---------------~n~W~v 462 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSFKL----IEKIG-------HVNVMYLGLACNVGRFLYYSYL---------------QNPWMV 462 (618)
T ss_pred eehhhhhccchHHHHHHHHHH----HHHhc-------ccceeeehhhHHHHHHHHHHHh---------------cCchhe
Confidence 344455556666666655544 66663 3345666666666666666644 255555
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHH-HHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchh
Q 007862 462 APQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLF-CSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLD 540 (587)
Q Consensus 462 i~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~ 540 (587)
++.=++.++..+.+..+..+|+...+|++.|.++.|+.. ...++|..+|+.+.+.+.... +..
T Consensus 463 LPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f----------------g~~ 526 (618)
T KOG3762|consen 463 LPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF----------------GAR 526 (618)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee----------------hhH
Confidence 666699999999999999999999999999999999766 556677777776666655321 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 007862 541 YFYFLIAGLGGLNIVYFLYCAR 562 (587)
Q Consensus 541 ~~f~~~~~~~~l~~v~~~~~~~ 562 (587)
..|..+++.+++..+.+....+
T Consensus 527 ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 527 TTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 5677777777766666655443
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.58 E-value=7.9e-08 Score=101.34 Aligned_cols=143 Identities=13% Similarity=0.030 Sum_probs=109.4
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHH-HHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWG-GVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~-~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.+..++..++..++++.....++.|+++ +|++..+.+.+..+.. +...++.+++|+++|| +||||.+.++.++..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r-~g~~~~l~~~~~~~~~- 287 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQP-LNILYALLLFGIVQAL- 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHH-
Confidence 5566666777788888888999999876 9999999998888766 5677899999999999 6999999988887766
Q ss_pred hhcccccccccceEEEeeec-cCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTA-WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.....+.. ... ..++ +..+.+.+....++.+++.+...+...+++.|.+|+
T Consensus 288 -----------~~~~~~~~~~~~~--------------~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~ 340 (356)
T TIGR00901 288 -----------TNAGFVWLASNGH--------------HDGI--TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNP 340 (356)
T ss_pred -----------HHHHHHHHHhcCc--------------cccc--ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 544333221 100 0000 001446677778888999999999999999999998
Q ss_pred CCcccccchhhhhhHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFT 197 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~ 197 (587)
++ |++.+++++...+
T Consensus 341 ~~------~g~~~g~~~~~~~ 355 (356)
T TIGR00901 341 KF------GATQMALLSSLSA 355 (356)
T ss_pred Cc------cHHHHHHHHHHHh
Confidence 66 9999999877655
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.55 E-value=1.5e-07 Score=98.00 Aligned_cols=141 Identities=21% Similarity=0.228 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCC-hhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMN-QTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s-~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
.+...++..+.++....+++.|+.+++|.+ ..+.+.+..+..+...++.++.|+++|| +|+|+...+......+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~---- 285 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDR-FGRRRRLLIAILLLIL---- 285 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHH----
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHH----
Confidence 445555555677778888999999999999 8999999999999999999999999999 6998888887777766
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
+.+...+... ..+....+...++.|++.+...+....++.|.+|+++
T Consensus 286 --------~~~~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 332 (352)
T PF07690_consen 286 --------GALGLLLLPF-----------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY-- 332 (352)
T ss_dssp --------HHHHHCCSHH-----------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH--
T ss_pred --------HHHHHHHHHH-----------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH--
Confidence 5554444331 1145566678888999999999999999999998755
Q ss_pred cccchhhhhhHHHHHHHHHHHHHh
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQ 204 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~ 204 (587)
|++..+......++|..++|
T Consensus 333 ----~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 333 ----RGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999987
No 200
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.55 E-value=1.8e-07 Score=103.25 Aligned_cols=165 Identities=13% Similarity=0.056 Sum_probs=116.9
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
|.++..++..++..++.+......+ |..++..-+....+.+..+..+...++.++.++++|| +|||+++.++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~-y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAI-YYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKS-LSRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhee-eEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHHHHHHHHHHHHH
Confidence 4555566666666666665555544 4444444456666777777778888999999999999 6999999988877665
Q ss_pred hhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 97 LAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 97 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
+.+...+....+ ..+.+.+++.-++.+++.+...+...++++|..|.
T Consensus 309 ------------~~~~~~~~~~~~---------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~ 355 (473)
T PRK10429 309 ------------SCGVLLLMGLAA---------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDY 355 (473)
T ss_pred ------------HHHHHHHHhccC---------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 443322110000 01455666677788999999999999999999886
Q ss_pred CC-cccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 177 TT-DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 177 ~~-~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
++ +.+++..+..++...+...+|..+++.+.|++.+..|+
T Consensus 356 ~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 356 GEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 53 33556667788999999999999999999888765554
No 201
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.51 E-value=8.8e-07 Score=95.32 Aligned_cols=158 Identities=9% Similarity=-0.082 Sum_probs=115.0
Q ss_pred HHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccc
Q 007862 30 RLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKG 109 (587)
Q Consensus 30 ~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g 109 (587)
..........++.|+++.+|.+..+.|.+.....++..++.++.+++.|| .++++++..+..+ .+ .
T Consensus 218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~-~~~~~~~~~g~~~-~~------------~ 283 (393)
T PRK11195 218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTL-ETVLRVLPAGILM-GL------------V 283 (393)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHHH-HH------------H
Confidence 34444555566778888999999999999999999999999999999999 5999988887543 33 2
Q ss_pred eEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhh
Q 007862 110 MLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFF 189 (587)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 189 (587)
.+...+.. +.+......++.|++.+...+...+.+.+..|+ + ..+++.+
T Consensus 284 ~~~~~~~~--------------------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~-~----~~~g~~~ 332 (393)
T PRK11195 284 VLLMALQH--------------------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHV-L----VGAGHSI 332 (393)
T ss_pred HHHHHHHh--------------------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcc-c----ccchhHH
Confidence 22222221 445556677788999998888888877765332 1 2379999
Q ss_pred hHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 190 NWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 190 ~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
+..++..+++..++..+.+.+ +..|-+..+.+..+..++.+.+
T Consensus 333 a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 333 AVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998866 4566666666555444444443
No 202
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.48 E-value=3.1e-05 Score=84.31 Aligned_cols=160 Identities=16% Similarity=0.090 Sum_probs=93.3
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---cCCCcceee
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAH---LHPMSQVSV 458 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~---~~~~~~~s~ 458 (587)
-.+..+..++..++....+....++.+|..+. .+...+..+.++..+..++.........+..+ .......+.
T Consensus 278 ~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~f----g~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~ 353 (461)
T KOG3098|consen 278 TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGF----GRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSY 353 (461)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhc----ccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccch
Confidence 34445555665555555555545556555433 34444555555544444443322111111101 011122344
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcc
Q 007862 459 FWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGR 538 (587)
Q Consensus 459 ~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~ 538 (587)
....+..+++|++.+.....-+.+.....|++ |..+-+++-+.+.+++.++....+....
T Consensus 354 ~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~-~~~~fsi~kfyq~~~s~v~~f~~~~~~l------------------- 413 (461)
T KOG3098|consen 354 YLALIIGFLLGFGDACFNTQRYVIIALLYPDD-RAQAFSLFKFYQSVASCVAFFFSPYLLL------------------- 413 (461)
T ss_pred hHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHhhhhhhhHH-------------------
Confidence 45556678999999999999999999999655 8899999999999999888776665431
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 539 LDYFYFLIAGLGGLNIVYFLYCARRYRY 566 (587)
Q Consensus 539 ~~~~f~~~~~~~~l~~v~~~~~~~~~~~ 566 (587)
........+.+.+...+++...++++.
T Consensus 414 -~~~~l~~~i~~~i~~~~~~~~~~~~~~ 440 (461)
T KOG3098|consen 414 -YIYTLGLPIFCVIATTIFFIVAERTQA 440 (461)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122334555555555566666655543
No 203
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.48 E-value=1.1e-06 Score=91.70 Aligned_cols=156 Identities=19% Similarity=0.116 Sum_probs=111.1
Q ss_pred HHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCC
Q 007862 43 YLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQL 122 (587)
Q Consensus 43 yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 122 (587)
.+.+++|++..+.+.+..+......+..++.|.++|| +||||.-+..++++.+ +.++--.
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~-~Grk~~cl~~cily~~------------scl~k~~------- 118 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADR-YGRKKACLLFCILYSL------------SCLTKHS------- 118 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHH------------HHHHHhc-------
Confidence 3457899999999999999999999999999999999 5999999999999998 5542111
Q ss_pred CCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH-HHHHHHHH
Q 007862 123 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY-TTFTVVIL 201 (587)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~ 201 (587)
.++..++++|++.|+++.....+--+.......++. -+++..+.-|+... ....+.+.
T Consensus 119 --------------------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g-~~~~~L~~tF~~~tf~~n~~vAI 177 (354)
T PF05631_consen 119 --------------------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRG-FPQEWLSDTFSLATFFGNGVVAI 177 (354)
T ss_pred --------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CChHHHHHHHHHHHHHHhHHHHH
Confidence 267899999999999999998877776554432211 01122344444333 22334455
Q ss_pred HHhhhhhhcccccch--hhHHHHHHHHHHHHHHHHHhccc
Q 007862 202 ITQTVLVYIQDSVSW--VIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 202 i~~~~~~~i~~~~~w--~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
+...++-++.+..+. ..+|..+.++.+++.++....++
T Consensus 178 ~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 178 GAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence 555666666665554 78898888877777666554444
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=98.48 E-value=1.9e-07 Score=103.34 Aligned_cols=143 Identities=17% Similarity=0.012 Sum_probs=100.6
Q ss_pred HhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCC
Q 007862 46 KEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPP 125 (587)
Q Consensus 46 ~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 125 (587)
+.++.+.. +...+..+....+.+++++++|| +|||+++.++.++..+ +.+++.+...
T Consensus 351 ~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr-~grr~~~~~~~~~~~~------------~~l~~~~~~~------- 407 (505)
T TIGR00898 351 GNLGGNIY---LDLFISGLVELPAKLITLLLIDR-LGRRYTMAASLLLAGV------------ALLLLLFVPV------- 407 (505)
T ss_pred cccCCChH---HHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH------------HHHHHHHcCC-------
Confidence 34555533 33334456667788999999999 6999999999888777 6554443321
Q ss_pred CCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhh
Q 007862 126 KCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQT 205 (587)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~ 205 (587)
......+...++.+++.++..+....+.+|.+|++. |++++++......+|+.++|.
T Consensus 408 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~ 464 (505)
T TIGR00898 408 -----------------DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPF 464 (505)
T ss_pred -----------------CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhH
Confidence 012334444556667777777888899999999855 999999999999999999999
Q ss_pred hhhhcccccchhhHHHHHHHHHHHHHHHHHh
Q 007862 206 VLVYIQDSVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 206 ~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
+.+ +. ..++...|.+.++..+++.++.++
T Consensus 465 i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 465 LVY-LG-EKWLFLPLVLFGGLALLAGILTLF 493 (505)
T ss_pred HHH-HH-HHHHhhHHHHHHHHHHHHHHHHHc
Confidence 988 43 456667777766665555554443
No 205
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.47 E-value=1.2e-06 Score=92.79 Aligned_cols=146 Identities=10% Similarity=0.065 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
..+....+...+.+......+.++.+++|.+..+.+.+..+..++..++.+++|+++|| +|||+++.++.++..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~---- 272 (377)
T PRK11102 198 GYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRR-VGALNMLRFGLWIQFI---- 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHH----
Confidence 33344444445556666666778888899999999999999999999999999999999 6999999988876444
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
..+........+ .+.+....+..+.+.+.+...+.....+.|..|+
T Consensus 273 --------~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 318 (377)
T PRK11102 273 --------MGIWLVVSALLD----------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH---- 318 (377)
T ss_pred --------HHHHHHHHHHHh----------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc----
Confidence 211111111000 0233344444445555555566556666666552
Q ss_pred cccchhhhhhHHHHH-HHHHHHHHhhhhh
Q 007862 181 GVKGINSFFNWYYTT-FTVVILITQTVLV 208 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~-~~~g~~i~~~~~~ 208 (587)
.+++..+.+... ..+|..+++.+++
T Consensus 319 ---~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 319 ---MAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 278888776544 3567777776654
No 206
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.47 E-value=6.5e-07 Score=95.73 Aligned_cols=62 Identities=11% Similarity=0.138 Sum_probs=53.7
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
.......+.|+.+++|++..+.+.+.....+...++.++.|++.|| +|||+++.++.++..+
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r-~g~~~~~~~~~~~~~~ 281 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGI-FKPRTLMLTSQVLFLA 281 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHH
Confidence 3344455677888999999999999999999999999999999999 5999999999888777
No 207
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.45 E-value=1.2e-06 Score=93.77 Aligned_cols=166 Identities=12% Similarity=-0.063 Sum_probs=109.6
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccch---hhhhH-HHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRF---KTITF-ASI 92 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~---~~~~~-~~~ 92 (587)
|.+|.+....++....+|++..++|.|++ +.|++.. .+....+......+ ..++++|| ..|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~-~~g~s~~-~~~~~~l~~~~g~~---g~~~~~d~-~~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALR-PAGLEDI-AGDAVALAILAGLI---GVAVIPDR-VARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCChH-HHHHHHHHHHHHHH---HHHHhhHH-hhhhhhHHHHHHHHHH
Confidence 44577777888888999999999999995 5788864 55555554444444 45788888 4654 33222 232
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
+..+ +.....+.. +....+....+.+++.....+...++.+|
T Consensus 266 ~~a~------------~~~~~~~~~--------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 307 (368)
T TIGR00903 266 LIAA------------FFLALAFEL--------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGK 307 (368)
T ss_pred HHHH------------HHHHHHHcc--------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 2222 222222211 12223444455667777777778889999
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
.+|++. |+++.++.+...++|+..+|.+.+.+.. +-+..|.+.++..+++.+..
T Consensus 308 ~~p~~~------rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 308 FCDKEL------HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred hcchhh------cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 999865 9999999999999999999999887773 55666666555555544443
No 208
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.8e-06 Score=94.82 Aligned_cols=176 Identities=15% Similarity=0.074 Sum_probs=124.6
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccc--------hhhh-
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR--------FKTI- 87 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr--------~~~~- 87 (587)
+.+|.+....+++..+++.+..++|.|+.+.+|++..+.|+..++-.+.+.+..+++|+++||. -+ ||.+
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l-~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRL-TFRILSETTVRKIFN 336 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hhccCchHhHHHHHH
Confidence 4458888999999999999999999999999999999999999999999999999999999995 43 2222
Q ss_pred hHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccc
Q 007862 88 TFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSI 167 (587)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 167 (587)
.++...-.+ .++.+++...-+ .......+.++..+.|+..++..
T Consensus 337 ~i~~~~~ai------------~l~~l~~~~~~~--------------------~~~a~~~l~~~~~~~g~~~~Gf~---- 380 (466)
T KOG2532|consen 337 TIAFGGPAV------------FLLVLAFTSDEH--------------------RLLAVILLTIAIGLSGFNISGFY---- 380 (466)
T ss_pred hHHHHHHHH------------HHHeeeecCCCc--------------------chHHHHHHHHHHHHcccchhhhH----
Confidence 223333333 445555543100 00122223333333333333332
Q ss_pred ccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccc---cchhhHHHHHHHHHHHHHHHHHh
Q 007862 168 PFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDS---VSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 168 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~---~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
.-..|..|. .-+..+++.....++.+.++|.+.+.+..+ -.|+++|++.+++.++..+.+.+
T Consensus 381 ~~~~~~apq-------~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 381 KNHQDIAPQ-------HAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred hhhhhccch-------HHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 223333443 258888999999999999999999999843 47999999999888877766544
No 209
>PRK09669 putative symporter YagG; Provisional
Probab=98.42 E-value=8.8e-07 Score=96.75 Aligned_cols=160 Identities=12% Similarity=0.050 Sum_probs=107.8
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
.+.++...++...+.. +...+..|..++.--+....+.+.....+...++.+++++++|| +|||+.+.++.++.++
T Consensus 231 ~~~l~~~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r-~gk~~~~~~~~~~~~~-- 306 (444)
T PRK09669 231 WRIMFIFNVVLLTAVV-TRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGK-FDRVRAFKWTIVAFVI-- 306 (444)
T ss_pred HHHHHHHHHHHHHHHH-HHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHH--
Confidence 3444444444434443 33334445444332233344455555667777888999999999 5999999988876554
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+.+...+.. ..+...+++..++.|++.+...+...++++|..|.++
T Consensus 307 ----------~~~~~~~~~------------------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e 352 (444)
T PRK09669 307 ----------LSALIFFIP------------------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEE 352 (444)
T ss_pred ----------HHHHHHHhC------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 222111111 0155667777889999999999999999999998644
Q ss_pred c-ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 179 D-EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 179 ~-~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
. .+++..+..++.+.+..++|..+|+.++|++.+..|+
T Consensus 353 ~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 353 KRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2 2445567788898899999999999999988766655
No 210
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.40 E-value=1.7e-06 Score=93.59 Aligned_cols=179 Identities=12% Similarity=0.045 Sum_probs=131.8
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
++..++..++...+.-....+...|+++.-|.+....+.+.++..+.-...-.+.+++..| +|-|++++++.+.+++
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r-~g~~~ll~~a~~~~~v-- 285 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKR-FGIKWLLLLALVAYAV-- 285 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHH--
Confidence 4444555666666666667788888765555777777877777777888888999999999 5999999999999888
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
=..+.+.... | ........+.+-.+.|+..|...++...++.+.+|++.
T Consensus 286 ----------R~~l~a~~~~-~--------------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~ 334 (400)
T PF03825_consen 286 ----------RWLLYAYFSD-P--------------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL 334 (400)
T ss_pred ----------HHHHHHHhcC-C--------------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc
Confidence 4444444321 0 00012233444567999999999999999999999866
Q ss_pred cccccchhhhhhHHHHH-HHHHHHHHhhhhhhcccccchh------hHHHHHHHHHHHHHHHHHhc
Q 007862 179 DEGVKGINSFFNWYYTT-FTVVILITQTVLVYIQDSVSWV------IGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~-~~~g~~i~~~~~~~i~~~~~w~------~~f~i~~~~~~~~~~~~~~~ 237 (587)
|+++.+++... ..+|..+|..++|++.|.+|-+ ..+.+++++.++..+++++.
T Consensus 335 ------~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 335 ------RATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred ------hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999865 5899999999999999886644 45566666655555555544
No 211
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.35 E-value=7.8e-07 Score=98.85 Aligned_cols=176 Identities=13% Similarity=0.116 Sum_probs=141.9
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccc--hhhhhHHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR--FKTITFASIAA 94 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr--~~~~~~~~~~~ 94 (587)
+.++.......+..++++.-..+++.|.. ..|+++.+++.++++..+...++.++.|+++|+. .. +.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 34555556666777888888888888866 9999999999999999999999999999999994 73 44444555555
Q ss_pred HHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC
Q 007862 95 ILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF 174 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~ 174 (587)
.+ +...+.+.. ++..+...-++.|+..|.........+.|..
T Consensus 376 gl------------~~~~~p~~~--------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~ 417 (509)
T KOG2504|consen 376 GL------------ARLFLPFAT--------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLV 417 (509)
T ss_pred HH------------HHHHHHHhc--------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55 443334433 6677888889999999999998888999999
Q ss_pred CCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc-hhhHHHHHHHHHHHHHHHHHhcc
Q 007862 175 DATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS-WVIGFGIPTVLMIGAIILFLVGK 238 (587)
Q Consensus 175 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~-w~~~f~i~~~~~~~~~~~~~~~~ 238 (587)
+.+. ...++++......++..+||.+.|++.|..+ |...|....+..+++...+++..
T Consensus 418 g~~~------l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 418 GLEK------LSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred Chhh------cchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 8755 8999999999999999999999999999877 99999988887777776655544
No 212
>PRK11043 putative transporter; Provisional
Probab=98.33 E-value=2.8e-06 Score=91.10 Aligned_cols=148 Identities=9% Similarity=0.009 Sum_probs=103.6
Q ss_pred HHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhccccccccc
Q 007862 29 ERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGK 108 (587)
Q Consensus 29 ~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (587)
....++.....++.|++ ++|++..+.++.......+..++..+++++.|| +|||+++....+...+
T Consensus 215 ~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r-~~~~~~~~~~~~~~~~------------ 280 (401)
T PRK11043 215 CSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQK-WGGEQLLPWLLVLFAV------------ 280 (401)
T ss_pred HHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHH------------
Confidence 33445555666777764 689999999998888888888999999999999 5999977665554444
Q ss_pred ceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhh
Q 007862 109 GMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSF 188 (587)
Q Consensus 109 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 188 (587)
+.+.+.+..... ..+....+....+.+++.+...|.......|..|+ + ++++
T Consensus 281 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~ 332 (401)
T PRK11043 281 SVIAIWLASLLS---------------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKA 332 (401)
T ss_pred HHHHHHHHHHhc---------------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHH
Confidence 322211111000 00334455566778889999999888877777653 2 8999
Q ss_pred hhHHHHHHHHHHHHHhhhhhhcccccchhh
Q 007862 189 FNWYYTTFTVVILITQTVLVYIQDSVSWVI 218 (587)
Q Consensus 189 ~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~ 218 (587)
.+++......++.+++.+.+.+.+......
T Consensus 333 ~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 333 AALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 999998888888888888888877544343
No 213
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.33 E-value=1.5e-05 Score=70.65 Aligned_cols=132 Identities=14% Similarity=0.219 Sum_probs=92.2
Q ss_pred cchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHH
Q 007862 387 ISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLI 466 (587)
Q Consensus 387 i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~ 466 (587)
...++..+..++.+++ .||+++ ++.+..+..+..++.+..... .+.+......+
T Consensus 6 ~~~~~~~~~~~~~g~~----~d~~g~-------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 59 (141)
T TIGR00880 6 GYALGQLIYSPLSGLL----TDRFGR-------KPVLLVGLFIFVLSTAMFALS---------------SNITVLIIARF 59 (141)
T ss_pred eehhHHHHHHhhHHHH----Hhhcch-------hHHHHHHHHHHHHHHHHHHHh---------------ccHHHHHHHHH
Confidence 3445555666665554 666533 345556666666665554432 24556666778
Q ss_pred HHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHH
Q 007862 467 LMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLI 546 (587)
Q Consensus 467 l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~ 546 (587)
+.+++.+...+....+..|.+|++.|++++++.+....+|..+++.+.+.+.+.. ++...|...
T Consensus 60 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------------~~~~~~~~~ 123 (141)
T TIGR00880 60 LQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL----------------GWRAPFLFL 123 (141)
T ss_pred HHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc----------------chHHHHHHH
Confidence 8999999999999999999999999999999999999999999999888776321 234556666
Q ss_pred HHHHHHHHHHHHHH
Q 007862 547 AGLGGLNIVYFLYC 560 (587)
Q Consensus 547 ~~~~~l~~v~~~~~ 560 (587)
+.+.++..+..++.
T Consensus 124 ~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 124 AILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHhhc
Confidence 66666665555444
No 214
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.29 E-value=4.9e-06 Score=86.69 Aligned_cols=165 Identities=12% Similarity=0.124 Sum_probs=128.0
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
.|.+.+--=+.+..+|.+..++|.+ ..|-|+|..++|++++...+......++.-.+++|.-.+|+.....++++.+
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~i-li~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~-- 286 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAI-LIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV-- 286 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHH-HHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH--
Confidence 4555555557889999999999988 4589999999999999999999999999999999866788888888888887
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
|...+.+... +.. +..-+++|+|.|+..|....++.+-.++.+
T Consensus 287 ----------G~~G~~~~P~-------------------------~~~--~lw~~llG~G~G~~F~laL~li~~rs~~a~ 329 (395)
T COG2807 287 ----------GLVGLLLAPG-------------------------QLP--ILWALLLGLGQGGAFPLALTLILLRSSDAA 329 (395)
T ss_pred ----------HHHHHHHhhh-------------------------hHH--HHHHHHHhCccchHHHHHHHHHHhhcCChH
Confidence 7776665442 222 222488999999999999999999887633
Q ss_pred cccccchhhhhhHHHHHHHHHHHHHhhhhhhccccc-chhhHHHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV-SWVIGFGIPTVLMI 228 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~-~w~~~f~i~~~~~~ 228 (587)
.-++..++.+-...+=+..||.+.|++.|.. +|+..+..-....+
T Consensus 330 -----~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i 375 (395)
T COG2807 330 -----IAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATL 375 (395)
T ss_pred -----HHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHH
Confidence 2455666666666677788999999999874 58876655444333
No 215
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.28 E-value=2.3e-06 Score=90.05 Aligned_cols=139 Identities=14% Similarity=0.155 Sum_probs=100.5
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLA 98 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~ 98 (587)
.+......++.....+++..+++.|+++++|+++.+++.+..+..+...++.+++|+++|| +|||+.+..+.++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r-~g~~~~~~~~~~~~~~-- 303 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDR-LGGARKLLMSFLGVAM-- 303 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHh-hccchhHHHHHHHHHH--
Confidence 3444444445555667778889999999999999999999999999999999999999999 5999988887776655
Q ss_pred hcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCC
Q 007862 99 EHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATT 178 (587)
Q Consensus 99 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 178 (587)
+..++.+... +..+...++....+.+++.|...+...+++.|.+|. +
T Consensus 304 ----------~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~ 350 (366)
T TIGR00886 304 ----------GAFLVVLGLV----------------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A 350 (366)
T ss_pred ----------HHHHHHhcCC----------------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h
Confidence 4443333210 000334445555566666677777777888888773 2
Q ss_pred cccccchhhhhhHHHHHHHHH
Q 007862 179 DEGVKGINSFFNWYYTTFTVV 199 (587)
Q Consensus 179 ~~~~~~r~~~~~~~~~~~~~g 199 (587)
+++..++.....++|
T Consensus 351 ------~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 351 ------TGAVSGLVGAIGNLG 365 (366)
T ss_pred ------cccHHHHHHHhccCC
Confidence 899999888777765
No 216
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.22 E-value=2.5e-06 Score=94.39 Aligned_cols=185 Identities=8% Similarity=0.029 Sum_probs=129.1
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhh----HHHHHHHHHHHHHHHhhhhHH----Hhhccccchhhh--
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTS----AANILNIWGGVTNFAPLLGAF----ISDTYIGRFKTI-- 87 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~----~~~i~~~~~~~~~~~~~~~G~----laD~~~Gr~~~~-- 87 (587)
.+..++....+....+......++.|..+..+.+... .+++.++..+...+.+++-.+ +.||..+.+...
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 3455555556666666667777888877765544322 667888888888877777554 444311223333
Q ss_pred hHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccc
Q 007862 88 TFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSI 167 (587)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~ 167 (587)
.++.++..+ +.+..++..... +.....+.+.++...++.++|+....|+..
T Consensus 353 ~~G~~l~~~------------~~~~~~~~~~~~-----------------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~ 403 (475)
T TIGR00924 353 TLGMLFCGA------------SFLTFAASIWFA-----------------DAGGLTSPWFMVLIYLFQTLGELMISPLGL 403 (475)
T ss_pred HHHHHHHHH------------HHHHHHHHHhhc-----------------CCCCccCHHHHHHHHHHHHHHHHHHhHHHH
Confidence 667777766 655544321100 001124788899999999999999999999
Q ss_pred ccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhc
Q 007862 168 PFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 168 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
+++++..|++. |++.++.++....+|..+++.+.....+..+|...|...++.+++..++++..
T Consensus 404 ~~~~~~aP~~~------~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 404 SWWTKIAPQRL------MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999855 99999999999999999999998877777788888877666655555544443
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.19 E-value=4.4e-06 Score=90.61 Aligned_cols=162 Identities=14% Similarity=-0.007 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHh-hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKE-YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.+......++.-.+..+...+++.|+.+. .+.+...++.....+..+..++.+++|+++|| +++||++.++.++.++
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r-~~~~~~l~i~~~~~~~- 311 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY-LAAHKVLMAYAIIGMA- 311 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHH-
Confidence 33334444454444456777888888643 25555555666777778889999999999999 6999999888887777
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDAT 177 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~ 177 (587)
..++..+.. +. .......+.++..+.+.|...+...+..+++
T Consensus 312 -----------~~ll~~~~~--------------------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~ 353 (410)
T TIGR00885 312 -----------LCLGSIFAG--------------------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQD 353 (410)
T ss_pred -----------HHHHHHHcC--------------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 544444332 11 1356667788888999999999999999864
Q ss_pred CcccccchhhhhhHHHHHHHHHHHHHhhhhhhccccc------chhhHHHHHHHHHH
Q 007862 178 TDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSV------SWVIGFGIPTVLMI 228 (587)
Q Consensus 178 ~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~------~w~~~f~i~~~~~~ 228 (587)
. ..+.+...+. -+|+++.|.+.|++.|.. +.+..|.++.+...
T Consensus 354 ~-------~~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 354 T-------KYGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred h-------hhhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 3 2223333333 399999999999999943 57888988766544
No 218
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.19 E-value=8.4e-06 Score=89.36 Aligned_cols=185 Identities=11% Similarity=0.057 Sum_probs=126.7
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.+...+.+.+...+.-........+.+-++-|++..++.+..........+..+++.++.|| .|||+.++++..++.+
T Consensus 270 ~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~-~gRRpLll~~~~~~~~- 347 (485)
T KOG0569|consen 270 PLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDR-LGRRPLLLISLSLMAV- 347 (485)
T ss_pred HHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHH-
Confidence 34555666667666666666667777888899999999999999999999999999999999 5999999999988877
Q ss_pred hhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHH-hccccccccccccccccCCC
Q 007862 98 AEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLS-IGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g-~g~g~~~~~~~~~~~~~~~~ 176 (587)
..+++.....+.. .......+. .+.+.++-. .-.=+..|...-+.+|.+|+
T Consensus 348 -----------~~~~~~~~~~l~~----------------~~~~~~~y~-~i~~~~~~~~~f~~G~gpi~~fi~aELf~~ 399 (485)
T KOG0569|consen 348 -----------ALLLMSIALFLSN----------------SFGSWLSYL-CIAAIFLFIISFAIGPGPIPWFIGAELFPQ 399 (485)
T ss_pred -----------HHHHHHHHHHHHH----------------HhhhHHHHH-HHHHHHHHHHhhhcCCCchhHHHHHHhCCc
Confidence 5554443321110 000011111 122222222 22334478889999999998
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccc
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKK 239 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~ 239 (587)
.. |..++++.+....+..++....-..+.+..|= ..|.+..+...+..+..+...|
T Consensus 400 ~~------R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 400 SA------RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred cc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence 66 99999999988888888887887778777763 4455444444444444444333
No 219
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.16 E-value=2.1e-05 Score=85.68 Aligned_cols=155 Identities=15% Similarity=0.077 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcc
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHF 101 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~ 101 (587)
.++..++...++.-..+.++.|.+-.+|.++....+.+........++.++...+.+| +|+||++.++.++.++
T Consensus 241 ~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~-~gkk~~~~~~~~~~~i----- 314 (467)
T COG2211 241 LLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKK-FGKKKLFLIGLLLLAV----- 314 (467)
T ss_pred HHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHH-hchHHHHHHHHHHHHH-----
Confidence 3344445544444344444555555667777777778888888888889999999999 6999999999999999
Q ss_pred cccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc-
Q 007862 102 VTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE- 180 (587)
Q Consensus 102 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~- 180 (587)
+.+++.+.. + .+..++++..++.++|.+...+...++++|..|-.|-+
T Consensus 315 -------~~~~~~f~~--~----------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~T 363 (467)
T COG2211 315 -------GYLLLYFTP--A----------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKT 363 (467)
T ss_pred -------HHHHHHhhc--C----------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHh
Confidence 887777654 1 26788899999999999999999999999998865532
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhhhcccc
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQTVLVYIQDS 213 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~ 213 (587)
+.|+-|..++.+..+.-+|.+++..+.|++...
T Consensus 364 G~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 364 GVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566777777777788888887777766443
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.11 E-value=2.1e-05 Score=84.15 Aligned_cols=141 Identities=9% Similarity=-0.003 Sum_probs=99.5
Q ss_pred HHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeee
Q 007862 37 LANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLT 116 (587)
Q Consensus 37 ~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 116 (587)
....+.|+.+.+|.+..+.+++......+..++.++.+++.|| .||+........+...+ ........
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 294 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKR-FSTLMWQSVICCLLAGL-----------LMWIPGWF 294 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-----------HHHHHHHh
Confidence 3445667777799999999999888888888899999999999 48444333222221110 11111110
Q ss_pred ccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHH
Q 007862 117 AWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTF 196 (587)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 196 (587)
. ..+.+.+..+.++.++|.+...|...++..|.+|+ .+++..+......
T Consensus 295 ~------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~g~~~~~~~~~~ 343 (394)
T PRK11652 295 G------------------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-------LAGTAGALLGGLQ 343 (394)
T ss_pred c------------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------cchHHHHHHHHHH
Confidence 0 01345567778889999999999999999998873 2788899999899
Q ss_pred HHHHHHHhhhhhhcccccchhhHH
Q 007862 197 TVVILITQTVLVYIQDSVSWVIGF 220 (587)
Q Consensus 197 ~~g~~i~~~~~~~i~~~~~w~~~f 220 (587)
++|..+++.+.+++.+...+....
T Consensus 344 ~lg~~~~~~~~~~~~~~~~~~~~~ 367 (394)
T PRK11652 344 NIGSGLAALLSAMLPQTGQFSLGL 367 (394)
T ss_pred HHHHHHHHHHHHHccCCchHHHHH
Confidence 999999999999887765444433
No 221
>PRK11462 putative transporter; Provisional
Probab=98.09 E-value=1.8e-05 Score=87.11 Aligned_cols=158 Identities=9% Similarity=-0.015 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhc
Q 007862 21 YILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEH 100 (587)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~ 100 (587)
.++...++..++..........|.+-.+| ++...+.+..++.+...++.+++++++|| +|+|+++..+.++..+
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r-~gkk~~~~~~~~~~~~---- 305 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDW-KCKVTIFWWTNALLAV---- 305 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hChHHHHHHHHHHHHH----
Confidence 33334444444444333333333333334 34455667778888888999999999999 5999987755544333
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCc-
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTD- 179 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~- 179 (587)
..++..+... .+...++...++.|++.+...+...++++|..+.+|-
T Consensus 306 --------~~~~~~~~~~------------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~ 353 (460)
T PRK11462 306 --------ISLAMFFVPM------------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWC 353 (460)
T ss_pred --------HHHHHHHhch------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHh
Confidence 2211111110 1222334455667888878777778889998875432
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccch
Q 007862 180 EGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSW 216 (587)
Q Consensus 180 ~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w 216 (587)
.++++-+..++...+...+|..+++.++|++.+..|+
T Consensus 354 tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 354 NGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2333345556777778899999998888776544333
No 222
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.09 E-value=1.9e-05 Score=78.28 Aligned_cols=147 Identities=17% Similarity=0.222 Sum_probs=110.4
Q ss_pred HHHHHHHhhCCCh--hhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeec
Q 007862 40 FMVYLLKEYHMNQ--TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTA 117 (587)
Q Consensus 40 ~~~yl~~~~~~s~--~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 117 (587)
....+..+++.+. ...+++...+.....++.++.|.++||+ |||+.+..+.....+ +.+...+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~------------~~~~~~~~~ 90 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLL------------GTLLLALAP 90 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHH------------HHHHHHhCc
Confidence 3334455565555 5789999999999999999999999995 999888888876444 433333322
Q ss_pred cCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHH-HH
Q 007862 118 WLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYT-TF 196 (587)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~ 196 (587)
. .+...++..|..+|++.|...+...+++.|.+|+ . +.|+...+.... ..
T Consensus 91 ~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~ 141 (338)
T COG0477 91 N------------------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAG 141 (338)
T ss_pred c------------------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHH
Confidence 1 1567889999999999999999999999999986 1 238888888887 57
Q ss_pred HHHHHHHhhhhhhcccc--cchhhHHHHHHHHHH
Q 007862 197 TVVILITQTVLVYIQDS--VSWVIGFGIPTVLMI 228 (587)
Q Consensus 197 ~~g~~i~~~~~~~i~~~--~~w~~~f~i~~~~~~ 228 (587)
.+|..+++.+++.+... .+|++.|.+......
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 142 ALGLALGPLLAGLLLGALLWGWRAAFLLAALLGL 175 (338)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 88888888777766543 678886666554443
No 223
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.04 E-value=1.2e-05 Score=84.70 Aligned_cols=144 Identities=15% Similarity=0.131 Sum_probs=115.6
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHH
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWL 461 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~l 461 (587)
+++...-.+..++..|+.+.+ .+|++.| ..+.+|++++..+.+++++. .+++.+
T Consensus 109 G~LFaskA~~qllvnp~~G~l----~~~iGy~-------ipm~~Gl~vmf~sTilFafg---------------~sy~~l 162 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNL----IDRIGYK-------IPMVAGLFVMFLSTILFAFG---------------NSYPML 162 (464)
T ss_pred hHHHHHHHHHHHHhcccchhh----HHHhccc-------cHHHHHHHHHHHHHHHHHHc---------------chhHHH
Confidence 444445556666666665555 6666443 66899999999999999876 366688
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhCCchh-hHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchh
Q 007862 462 APQLILMGFCEAFNIIGQIEFFNKQFPDHM-KSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLD 540 (587)
Q Consensus 462 i~~~~l~~~ge~~~~~~~~~~~~~~~P~~~-rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~ 540 (587)
+++-.++++|.++......++..+.+|++. ||.++|....+..+|..+++...+++++.. ++.
T Consensus 163 ~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~----------------Gk~ 226 (464)
T KOG3764|consen 163 FVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA----------------GKS 226 (464)
T ss_pred HHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc----------------CCc
Confidence 889999999999999999999999999665 699999999999999999999999888642 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007862 541 YFYFLIAGLGGLNIVYFLYCARRYRYK 567 (587)
Q Consensus 541 ~~f~~~~~~~~l~~v~~~~~~~~~~~~ 567 (587)
..|.++++++++....-++..+.++.+
T Consensus 227 aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 227 APFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred CcHHHHHHHHHHHHHHHHheeCccccC
Confidence 789999999999988877776654443
No 224
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.00 E-value=5.1e-05 Score=76.52 Aligned_cols=133 Identities=12% Similarity=0.089 Sum_probs=101.9
Q ss_pred HHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeecc
Q 007862 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAW 118 (587)
Q Consensus 39 ~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 118 (587)
.....+++.+|+|++|...+..+-.++.+++ +++|.+.|+ .|.+.++.++.+...+ |..++.++..
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~-~gp~~~l~iG~~~~~~------------GY~~~~l~~~ 88 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDR-FGPWVVLLIGAVLGFV------------GYGLLWLAVS 88 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHh-cchHHHHHHHHHHHHH------------HHHHHHHHHh
Confidence 3445789999999999999999999999875 888999999 5999999999999999 8887766442
Q ss_pred CCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHH
Q 007862 119 LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTV 198 (587)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 198 (587)
- ..+..+.+.+.+..++.+.|.+.+..++.....+.||+ + ||++.++.-....+
T Consensus 89 ~-------------------~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GL 142 (250)
T PF06813_consen 89 G-------------------RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGL 142 (250)
T ss_pred C-------------------ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHh
Confidence 0 01112566677777777777777777777777889985 3 89999998877777
Q ss_pred HHHHHhhhhhhcc
Q 007862 199 VILITQTVLVYIQ 211 (587)
Q Consensus 199 g~~i~~~~~~~i~ 211 (587)
++.+-..+...+.
T Consensus 143 Saai~t~i~~~~f 155 (250)
T PF06813_consen 143 SAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHHHHHHHHc
Confidence 7765544443333
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.00 E-value=1.6e-06 Score=92.80 Aligned_cols=145 Identities=15% Similarity=0.210 Sum_probs=112.8
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHH
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWL 461 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~l 461 (587)
++++....+..++..|+.+.+ .+|+ +|.+.+.+|..+..++.+..++.. .+|.+
T Consensus 71 Gll~~vf~v~~~i~sPl~gyL----adry-------NR~~v~~vG~~iW~~Av~~~~fs~---------------~Fwq~ 124 (493)
T KOG1330|consen 71 GLLQTVFIVVFMIASPLFGYL----ADRY-------NRKRVIAVGIFIWTLAVFASGFSN---------------HFWQV 124 (493)
T ss_pred cchhHHHHHHHHHHHHHHHHH----Hhhc-------CcceEEeeHHHHHHHHHHHHHHHH---------------HHHHH
Confidence 455555666777777777666 7776 455778999999998888887652 45556
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhH
Q 007862 462 APQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDY 541 (587)
Q Consensus 462 i~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~ 541 (587)
++.-.+.|+||+...|..+.+..|.+|++.|+++.+++++....|+.+|......+...+ ..| .+
T Consensus 125 ~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~-----~~W----------r~ 189 (493)
T KOG1330|consen 125 LLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT-----FWW----------RW 189 (493)
T ss_pred HHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc-----cce----------EE
Confidence 677799999999999999999999999999999999999999999999877766665443 124 35
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccc
Q 007862 542 FYFLIAGLGGLNIVYFLYCARRYRYK 567 (587)
Q Consensus 542 ~f~~~~~~~~l~~v~~~~~~~~~~~~ 567 (587)
.|...++++++..+..+++.++.+++
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccc
Confidence 67788888888877777776665543
No 226
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.99 E-value=2.2e-05 Score=81.78 Aligned_cols=169 Identities=13% Similarity=0.054 Sum_probs=107.1
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhh--C-----------------CChhhHHHHHHHHHHHHHHHhhhhHHHhh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEY--H-----------------MNQTSAANILNIWGGVTNFAPLLGAFISD 78 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~--~-----------------~s~~~~~~i~~~~~~~~~~~~~~~G~laD 78 (587)
.-+.+...-+-++++||++.-......+... | .+..+---=+.+.+..-.-+.++.+++.|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 3344556677788999987765444333211 1 11111111122344555667899999999
Q ss_pred ccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhc
Q 007862 79 TYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIG 158 (587)
Q Consensus 79 ~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 158 (587)
| +||||++-.+++++.+ ..+++. +|++++... .++..+|..++
T Consensus 407 r-lGRKkTMal~l~~f~i------------flfll~---------------------~c~~rn~~t-vllf~arafis-- 449 (528)
T KOG0253|consen 407 R-LGRKKTMALSLILFGI------------FLFLLT---------------------TCKTRNAYT-VLLFTARAFIS-- 449 (528)
T ss_pred H-hcchhHHHHHHHHHHH------------HHHHHH---------------------HhcCcchhH-HHHHHHHHHHh--
Confidence 9 7999999999999888 443322 244444443 34556666664
Q ss_pred cccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 007862 159 TGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIIL 233 (587)
Q Consensus 159 ~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~ 233 (587)
+...+++.|..|.+|.+. |+++.|....+..+|+++.|.++ ...+..-.-.+| +.....+++.+.
T Consensus 450 --g~fqvaYvYtPEVyPTav------RatgvGtcSsmaRIggI~~p~iA-~~~e~s~sl~i~-vy~~~~ilagIa 514 (528)
T KOG0253|consen 450 --GAFQVAYVYTPEVYPTAV------RATGVGTCSSMARIGGIFSPVIA-MRAELSTSLPIF-VYGALFILAGIA 514 (528)
T ss_pred --chheEEEEecCcccchhh------hhcchhhhhhHHhhhhhhhhHHH-HHhccceeehHH-HHHHHHHHHHHH
Confidence 445568899999999865 99999999999999999999998 333322223333 344444444444
No 227
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.89 E-value=2.3e-05 Score=84.33 Aligned_cols=173 Identities=8% Similarity=0.079 Sum_probs=130.6
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhC---CChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYH---MNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIA 93 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~---~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~ 93 (587)
|.+|............|+..-.-++.|.+..++ .++...|.+.++.-+.-.+.-.+..++-+| +|.|+.++++.++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~r-ig~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINR-IGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHh-cChHhHHHHHHHH
Confidence 445555554444444555554557778776553 455667888888888888899999999999 7999999999999
Q ss_pred HHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 94 AILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 94 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
+.+ =...++++. +++.+.+.+.+.++-.+.....+.-++++.
T Consensus 299 ~~i------------Ri~~~~~~~--------------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 299 MAI------------RIIGSGFAT--------------------------NPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHH------------HHHHHHT----------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH------------HHHHHhhhc--------------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888 555666655 778899999999999999999999999999
Q ss_pred CCCCCcccccchhhhhhHH-HHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 174 FDATTDEGVKGINSFFNWY-YTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~-~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
+|++- ..+.+.+. .....+|..+.+.++|++.|+.|.+..|++-+.+++...++.
T Consensus 341 fd~rl------sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~ 396 (412)
T PF01306_consen 341 FDKRL------SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLIS 396 (412)
T ss_dssp S-GGG------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHhH------HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHh
Confidence 99733 56777764 366789999999999999999999988877665555444443
No 228
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.89 E-value=0.00018 Score=77.92 Aligned_cols=136 Identities=10% Similarity=0.026 Sum_probs=95.8
Q ss_pred cchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHH
Q 007862 387 ISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLI 466 (587)
Q Consensus 387 i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~ 466 (587)
+..++..+..++.+. +.||+++| +.+..+.++.+++.+..... .+.++++..-+
T Consensus 59 ~~~~~~~~~~~~~G~----l~dr~Grr-------~~l~~~~~~~~~~~~~~~~a---------------~~~~~l~~~r~ 112 (413)
T PRK15403 59 LYLAGGMALQWLLGP----LSDRIGRR-------PVLITGALIFTLACAATLFT---------------TSMTQFLIARF 112 (413)
T ss_pred HHHHHHHHHHHhhhH----HHHHcCch-------HHHHHHHHHHHHHHHHHHHc---------------CCHHHHHHHHH
Confidence 344555555555444 48887544 56667777777666665532 36667777888
Q ss_pred HHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHH
Q 007862 467 LMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLI 546 (587)
Q Consensus 467 l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~ 546 (587)
+.|++++...+....+..+.+|++.+++++++.+....++..+++.+.+.+.+.. + ....|+..
T Consensus 113 l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~------g----------w~~~f~~~ 176 (413)
T PRK15403 113 IQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV------H----------WKVLFAII 176 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------C----------HHHHHHHH
Confidence 9999998777777888889999999999999999999999999988887765321 3 35677777
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 007862 547 AGLGGLNIVYFLYCARRY 564 (587)
Q Consensus 547 ~~~~~l~~v~~~~~~~~~ 564 (587)
+++.++..+..++..++.
T Consensus 177 ~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 777666665544444443
No 229
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.82 E-value=0.00012 Score=60.17 Aligned_cols=69 Identities=22% Similarity=0.203 Sum_probs=57.2
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHH
Q 007862 24 GNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAA 94 (587)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~ 94 (587)
..-++...+.-.+.++++.|+. +.|+|..+.|.+.++..+...++++++|+++|| .||+|.++....++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk-~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADK-FGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCccHHHHHHHHHH
Confidence 3344555555667788888877 599999999999999999999999999999999 59999888876654
No 230
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.81 E-value=7.4e-05 Score=79.51 Aligned_cols=169 Identities=18% Similarity=0.236 Sum_probs=134.3
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhccccc
Q 007862 25 NETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTK 104 (587)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~ 104 (587)
.-++..+++++-=..+=+|=.+.+|++..|..-+...+..+..++-.+.|++..|..+++++-.+++.+..+
T Consensus 216 fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~-------- 287 (403)
T PF03209_consen 216 FLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGAL-------- 287 (403)
T ss_pred HHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH--------
Confidence 333444444444444556666789999999999999999999999999999998668999999999988888
Q ss_pred ccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccc
Q 007862 105 YQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKG 184 (587)
Q Consensus 105 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 184 (587)
+..++.++... .+.+.+..+.++.|+|.|.......+.+-|..++.+
T Consensus 288 ----~f~lii~a~~~-----------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------ 334 (403)
T PF03209_consen 288 ----AFALIILAGPL-----------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------ 334 (403)
T ss_pred ----HHHHHHHHHhc-----------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------
Confidence 77766665531 256889999999999999999999999999998754
Q ss_pred hhhhhhHHHHHHHHHHHHHhhhhhhccc----------ccchhhHHHHHHHHHHHHHHHH
Q 007862 185 INSFFNWYYTTFTVVILITQTVLVYIQD----------SVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 185 r~~~~~~~~~~~~~g~~i~~~~~~~i~~----------~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
-|.+++.......+...++-.++|.+.| ..+|..+|.+-+++.++++.+.
T Consensus 335 aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 335 AGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 7899999998888888888888877653 2457788888888777766553
No 231
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.78 E-value=4.2e-07 Score=99.02 Aligned_cols=179 Identities=15% Similarity=0.126 Sum_probs=111.0
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHh
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILL 97 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~ 97 (587)
.....+....+..+..+....+..+++.+..+.++. -.......+...++.+++.++.|| +|||++++++.++..+
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~GRr~~~i~~~~~~~~- 328 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDR-FGRRKLLIIGLLLMAI- 328 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccc-cccccccccccccccc-
Confidence 344444455555455544555556666777777776 222233345555677788899999 6999999999988887
Q ss_pred hhcccccccccceEEEe-eeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCC
Q 007862 98 AEHFVTKYQGKGMLTVT-LTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDA 176 (587)
Q Consensus 98 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 176 (587)
..+.++ .....+. .+...+...+....+.......+..+....+.+|.||+
T Consensus 329 -----------~~~~~~~~~~~~~~-----------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt 380 (451)
T PF00083_consen 329 -----------CSLILGIIFFLGVS-----------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPT 380 (451)
T ss_pred -----------cccccccccccccc-----------------cccccccccceeeeeccccccccccccccccccccccc
Confidence 666554 1111000 00001222222222222233335567777889999998
Q ss_pred CCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 007862 177 TTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILF 234 (587)
Q Consensus 177 ~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~ 234 (587)
+. |+++.++.+....+++.+++.+..++.+..+-...|.+.+...++..+..
T Consensus 381 ~~------R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~ 432 (451)
T PF00083_consen 381 KV------RSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFV 432 (451)
T ss_pred cc------cccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhe
Confidence 65 99999999999999999999998888877663444555554444444443
No 232
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.73 E-value=4.1e-05 Score=85.04 Aligned_cols=175 Identities=11% Similarity=0.106 Sum_probs=113.5
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhCCCh----hhHHHHHHHHHHHHHHHhhhhHHHhhccccchhh-------hhHHHHHH
Q 007862 26 ETFERLATIGLLANFMVYLLKEYHMNQ----TSAANILNIWGGVTNFAPLLGAFISDTYIGRFKT-------ITFASIAA 94 (587)
Q Consensus 26 ~~~~~~~~~~~~~~~~~yl~~~~~~s~----~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~-------~~~~~~~~ 94 (587)
..+....+......++.|.++..+.+. -...++.+...+...+..++.|++.|| +|||+. +.+++++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~r-l~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTH-LGSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHH-HhhCCCCCCcHHHHHHHHHHH
Confidence 344445555565777777765333221 123455555666677788888999999 599984 77777776
Q ss_pred HHhhhcccccccccceEEEeeecc-CCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 95 ILLAEHFVTKYQGKGMLTVTLTAW-LPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 95 ~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
.+ +++..+.... ... .....+.+.++..-+++++|++...|....++.+.
T Consensus 357 ~~------------~~~~~~~~~~~~~~-----------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~ 407 (489)
T PRK10207 357 SL------------GFLTAAAAGMWFAD-----------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAAL 407 (489)
T ss_pred HH------------HHHHHHHHHHhhcC-----------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 66 5533211000 000 00012456677888999999999999999999999
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc----------ccchhhHHHHHHHHHHHHHHHHHh
Q 007862 174 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD----------SVSWVIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~----------~~~w~~~f~i~~~~~~~~~~~~~~ 236 (587)
.|++. ++.+++.++...++|..++..++.+... ...+.+.|...++..++..+++++
T Consensus 408 aP~~~------~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 408 VPQHL------MGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred ChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99855 8999999999999999999888765521 012456666555444443333333
No 233
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.69 E-value=0.0066 Score=65.30 Aligned_cols=131 Identities=15% Similarity=0.096 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCC
Q 007862 55 AANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPF 134 (587)
Q Consensus 55 ~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (587)
.+.++.+-.+-..+.-+++-+..+| +.-+.=+.++.++.++ |+++.+++.
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~-v~y~~Ri~~~~~l~~~------------g~l~va~~~----------------- 110 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHR-VPYWIRILICVALSAA------------GMLLVAFSP----------------- 110 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhh-ccchHHHHHHHHHHHH------------HHhheeecc-----------------
Confidence 3446666666666667778888888 5765556677777888 999888865
Q ss_pred CcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-c
Q 007862 135 GQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-S 213 (587)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-~ 213 (587)
+.++-+++-.+.+++.|.-.....++.. .+++ ...+.+..+...++.+|+..-..+.+ .
T Consensus 111 ---------~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----------~~l~~wssGTG~aGl~Ga~~y~~lT~~g 170 (402)
T PF02487_consen 111 ---------SVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----------SSLSAWSSGTGGAGLVGALYYLGLTTLG 170 (402)
T ss_pred ---------chhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----------cccccccCCcChhhHHHHHHHHHHHHhC
Confidence 6677789999999999999988888655 4553 13444455556666666655444443 2
Q ss_pred cchhhHHHHHHHHHHHHHHHHH
Q 007862 214 VSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 214 ~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
.+-|..+.+..++-++.++.++
T Consensus 171 ~s~~~tll~~~~lp~~~~~~~f 192 (402)
T PF02487_consen 171 LSPRTTLLIMLVLPAIFLLSYF 192 (402)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 3346666666555444443333
No 234
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.65 E-value=6.7e-05 Score=82.88 Aligned_cols=134 Identities=6% Similarity=-0.150 Sum_probs=106.6
Q ss_pred HHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEe-ee-ccCCCC
Q 007862 45 LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVT-LT-AWLPQL 122 (587)
Q Consensus 45 ~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~-~~~~~~ 122 (587)
.+.+|.++.+.|.+.....++..++..+.+++.+| ++.|+++.++.++..+ +.+... +. .+-...
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~-~~~r~~l~~~~~l~~~------------~~~~~~~l~~~~~~~~ 346 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKT-FPYRLLFGVTTLLYTL------------SSLFDLILVKRWNLAF 346 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHH------------HHhCceeeeecccccc
Confidence 45789999999999999999999999999999999 6999999999999888 654432 11 110000
Q ss_pred CCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHH
Q 007862 123 HPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILI 202 (587)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 202 (587)
+. .+...+...-++.+++.+........++.+..|++. +++.++++....++|..+
T Consensus 347 gi------------------~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v 402 (468)
T TIGR00788 347 GI------------------SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSV 402 (468)
T ss_pred CC------------------CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHH
Confidence 00 022234555677888888888888999999999866 899999999999999999
Q ss_pred Hhhhhhhcccccc
Q 007862 203 TQTVLVYIQDSVS 215 (587)
Q Consensus 203 ~~~~~~~i~~~~~ 215 (587)
++.+++++.+..|
T Consensus 403 ~~~~gg~l~~~~g 415 (468)
T TIGR00788 403 SGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999988766
No 235
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.64 E-value=9.6e-05 Score=82.34 Aligned_cols=169 Identities=12% Similarity=0.024 Sum_probs=111.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHH--hhCCCh------hhHHHHHHHHHHHHHHHhhhh----HHHhhccccchhhhhHHHHH
Q 007862 26 ETFERLATIGLLANFMVYLLK--EYHMNQ------TSAANILNIWGGVTNFAPLLG----AFISDTYIGRFKTITFASIA 93 (587)
Q Consensus 26 ~~~~~~~~~~~~~~~~~yl~~--~~~~s~------~~~~~i~~~~~~~~~~~~~~~----G~laD~~~Gr~~~~~~~~~~ 93 (587)
.++....+|.+...++.++.. ..+.+. ...+++.++..+...+..++. +++.|| ++..+.+.++.++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r-~~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR-LPMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC-CCcHHHHHHHHHH
Confidence 334555666666666655443 111211 225666677776666776666 555666 3666888999999
Q ss_pred HHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 94 AILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 94 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
..+ |++.+.+....+. ..+..+.+.++...+++++|++...|...+++.+.
T Consensus 360 ~~l------------~f~~l~~~~~~~~-----------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~ 410 (500)
T PRK09584 360 CSG------------AFLVLPLGAKFAN-----------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQL 410 (500)
T ss_pred HHH------------HHHHHHHHHHhcC-----------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 888 8777655442110 00123556788999999999999999999999999
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc----------ccchhhHHHHHHHHHHHH
Q 007862 174 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD----------SVSWVIGFGIPTVLMIGA 230 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~----------~~~w~~~f~i~~~~~~~~ 230 (587)
.|++. |++.++.++....+|..++..+...... ..++.+.|...++..++.
T Consensus 411 aP~~~------rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 471 (500)
T PRK09584 411 VPQRL------MGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVI 471 (500)
T ss_pred CcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHH
Confidence 99855 9999999888888888777666643221 123667776655544433
No 236
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.58 E-value=0.00069 Score=67.95 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=91.6
Q ss_pred HHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCC
Q 007862 42 VYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQ 121 (587)
Q Consensus 42 ~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 121 (587)
.|+.+.+|+...+.|.+..+......+...+.|-++|+ .|||+.-..-++.+++ .+++..
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDk-qGRKracvtycitYiL----------------sCiTKh--- 120 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADK-QGRKRACVTYCITYIL----------------SCITKH--- 120 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhh-hccccceeeehHHHHH----------------HHHhhc---
Confidence 46677899999999999888888888999999999999 6999976665555555 233332
Q ss_pred CCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccc-ccccCCCCCcccccchhhhhhHHHH------
Q 007862 122 LHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPF-GVDQFDATTDEGVKGINSFFNWYYT------ 194 (587)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~------ 194 (587)
+.++-+++++|.+-|+.+.....+--+. ++|.-+ +|+.=.-|...
T Consensus 121 --------------------SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne--------kr~FeqqWls~TFskA~ 172 (454)
T KOG4332|consen 121 --------------------SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE--------KRGFEQQWLSVTFSKAV 172 (454)
T ss_pred --------------------CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh--------ccCChHhhhhHHHHHHH
Confidence 1266779999999999998877665543 333222 23333333322
Q ss_pred --HHHHHHHHHhhhhhhccccc--chhhHHHHHHHHHHHHH
Q 007862 195 --TFTVVILITQTVLVYIQDSV--SWVIGFGIPTVLMIGAI 231 (587)
Q Consensus 195 --~~~~g~~i~~~~~~~i~~~~--~w~~~f~i~~~~~~~~~ 231 (587)
...+.+.+....+-++.+.+ |-..+|-..+.+..++.
T Consensus 173 ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm 213 (454)
T KOG4332|consen 173 FFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM 213 (454)
T ss_pred HhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH
Confidence 23344455555555566554 34566665555444443
No 237
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.54 E-value=0.00037 Score=79.94 Aligned_cols=127 Identities=15% Similarity=0.039 Sum_probs=90.0
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHh--hhcc------------
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERG--RRAS------------ 447 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~--~~~~------------ 447 (587)
+++.....++..+..+++.++ .+|.+ +++.+++|.++.+++.+++++..-. +++.
T Consensus 71 G~i~s~~~i~~~~~~i~v~~~----~~r~~-------r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~ 139 (633)
T TIGR00805 71 GLINGSYEIGNLLLIIFVSYF----GTKLH-------RPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSS 139 (633)
T ss_pred eeeeehhhHHHHHHHHHHHHh----hcccC-------cceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccc
Confidence 455556667777777765555 66653 3466788888888888777654310 0000
Q ss_pred -----cccC----------------CCc-ceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHH
Q 007862 448 -----AHLH----------------PMS-QVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGF 505 (587)
Q Consensus 448 -----~~~~----------------~~~-~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~l 505 (587)
+... ... ...+..++++-++.|+|++...+...+++.|.+|++.|+.+.|++.....+
T Consensus 140 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~i 219 (633)
T TIGR00805 140 ANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVF 219 (633)
T ss_pred cccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHh
Confidence 0000 000 113445667889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhc
Q 007862 506 ASYLSSLLITIVHG 519 (587)
Q Consensus 506 g~~l~~~l~~~v~~ 519 (587)
|..+++.+.+.+..
T Consensus 220 G~~lG~llgg~l~~ 233 (633)
T TIGR00805 220 GPAFGYLLGSFCLQ 233 (633)
T ss_pred hhHHHHHHHHHHHh
Confidence 99999988887664
No 238
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.50 E-value=0.00066 Score=75.30 Aligned_cols=130 Identities=12% Similarity=0.063 Sum_probs=84.4
Q ss_pred hhhhhchhhhhHHHhhhh-hcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHH
Q 007862 393 GLWLPFYDTVLVPALRKI-TKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFC 471 (587)
Q Consensus 393 ~l~~~l~~~l~~~l~~r~-~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~g 471 (587)
.+..++.+++ .||+ ++| +.+..|.++..++.+...... .+...+.....+..+|
T Consensus 59 ~l~~ligG~L----aDRilGrr-------r~iliG~il~~lg~lll~~~~--------------~~~~~~~l~l~li~iG 113 (493)
T PRK15462 59 YVTPILGGFL----ADKVLGNR-------MAVMLGALLMAIGHVVLGASE--------------IHPSFLYLSLAIIVCG 113 (493)
T ss_pred HHHHHHHHHH----HHHccCcH-------HHHHHHHHHHHHHHHHHHHhh--------------cchhHHHHHHHHHHHh
Confidence 3344444444 7776 433 556777777777765443211 1112234445566677
Q ss_pred HHHHhhhhHHHHHhhCCch--hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHH
Q 007862 472 EAFNIIGQIEFFNKQFPDH--MKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGL 549 (587)
Q Consensus 472 e~~~~~~~~~~~~~~~P~~--~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~ 549 (587)
.++..+...++..|.+|++ .|+.+.++.....++|+.+++.+.+.+.+.. ++...|...++.
T Consensus 114 ~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~----------------Gw~~~F~iaaig 177 (493)
T PRK15462 114 YGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY----------------SWAMGFGLAAVG 177 (493)
T ss_pred cccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh----------------ChHHHHHHHHHH
Confidence 7777788889999999975 7999999999989999999999998875422 234567666655
Q ss_pred HHHHHHHHHHHHhh
Q 007862 550 GGLNIVYFLYCARR 563 (587)
Q Consensus 550 ~~l~~v~~~~~~~~ 563 (587)
.+++.+.+++..+.
T Consensus 178 m~l~li~~~~~~~~ 191 (493)
T PRK15462 178 MIAGLVIFLCGNRH 191 (493)
T ss_pred HHHHHHHHHHhhhh
Confidence 55666555544433
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.49 E-value=7.2e-05 Score=81.50 Aligned_cols=162 Identities=11% Similarity=0.062 Sum_probs=130.8
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
++...+++-+=.++++-..+-.|.....-..+-++.-++.+++..| +|+-+++.+++....+ =.+..
T Consensus 387 ~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~k-iGHv~v~~lgLa~~~~------------Rf~~~ 453 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEK-IGHVNVMYLGLACNVG------------RFLYY 453 (618)
T ss_pred HHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHH-hcccceeeehhhHHHH------------HHHHH
Confidence 3444444555567888777777777777777788888999999999 6999999999887766 44433
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
.... |+|+.+..-+++|+-.+.+..++.+|+++..|++. |.++.++..
T Consensus 454 S~L~--------------------------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~ 501 (618)
T KOG3762|consen 454 SYLQ--------------------------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQ 501 (618)
T ss_pred HHhc--------------------------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHH
Confidence 4333 78889999999999999999999999999999866 899999888
Q ss_pred HHH-HHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccce
Q 007862 194 TTF-TVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKL 240 (587)
Q Consensus 194 ~~~-~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~ 240 (587)
... .+|-.+|.+++|.+.+.+|-|.-|.+.++..++.++++....+.
T Consensus 502 g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 502 GIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred HHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 554 88999999999999999999999998888888777776654443
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.48 E-value=0.00039 Score=76.77 Aligned_cols=205 Identities=9% Similarity=-0.042 Sum_probs=137.6
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHh-hCCChh------h----HHHHHHHHHHHHHHHhhhhHHHhhccc
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKE-YHMNQT------S----AANILNIWGGVTNFAPLLGAFISDTYI 81 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-~~~s~~------~----~~~i~~~~~~~~~~~~~~~G~laD~~~ 81 (587)
+.-||.++.+..++++..++++.+..+.+.|+.++ ||-++. + ..+....+++...+.+++--++.++ +
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~-~ 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG-W 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 45678889999999999999999999999999864 443221 1 2345555566666777778888999 6
Q ss_pred cc-hhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccc
Q 007862 82 GR-FKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTG 160 (587)
Q Consensus 82 Gr-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g 160 (587)
|+ |++..++.++..+ +++...+....+.=.. +-+++. .. -.|+.......++...+.|+..+
T Consensus 333 g~~k~~~~~s~~~~~~------------~l~~~~~i~~~~~~~~-~~~~~~--~~--~~~~~~~~~~~l~~~~~~Gi~~A 395 (477)
T TIGR01301 333 GAGKRLWGIVNIILAI------------CLAATVLVTYVAKNSR-YYDGDG--ES--LPPPTGIKASALIVFAILGIPLA 395 (477)
T ss_pred ccchhHHHHHHHHHHH------------HHHHHHHHHhhhhccc-cccccc--cc--cCcchhhHHHHHHHHHHhhHHHH
Confidence 95 6666888776666 5554443221110000 000000 00 01111224667777788999999
Q ss_pred cccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccc--hhhHHHHHHHHHHHHHHHHHhcc
Q 007862 161 GIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVS--WVIGFGIPTVLMIGAIILFLVGK 238 (587)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~--w~~~f~i~~~~~~~~~~~~~~~~ 238 (587)
.+...-++++++..+++. ++.|..++++..+..+...+..+..|.+.+..| -...+.+.++.++++.++.+...
T Consensus 396 ~~~siPfal~s~~~~~~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 396 ITYSIPFALASIRSSNLG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHHHhHHHHHHHccccC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999988533 457899999998888888888777777554444 45788888888888877766544
Q ss_pred c
Q 007862 239 K 239 (587)
Q Consensus 239 ~ 239 (587)
|
T Consensus 472 ~ 472 (477)
T TIGR01301 472 P 472 (477)
T ss_pred C
Confidence 4
No 241
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.42 E-value=0.0027 Score=69.55 Aligned_cols=106 Identities=11% Similarity=-0.004 Sum_probs=83.0
Q ss_pred ccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHH
Q 007862 386 VISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQL 465 (587)
Q Consensus 386 ~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~ 465 (587)
.....+-.+.....+.+ .||++ .++.+..+++..++..++.++. .++..+.+.-
T Consensus 69 s~F~ysYal~qIp~GlL----aDrlG-------~K~vL~l~~l~Wsl~t~L~~fa---------------~Sl~~L~i~R 122 (511)
T TIGR00806 69 PVLPYSHLAVLVPVFLL----TDYLR-------YKPVLVLQALSFVCVWLLLLLG---------------TSVWHMQLME 122 (511)
T ss_pred HHHHHHHHHHHHHHHHH----HHHhC-------chHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHH
Confidence 33444555555554444 77764 3466777777777777766654 3567788888
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007862 466 ILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVH 518 (587)
Q Consensus 466 ~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~ 518 (587)
+++|++|+... ....++++-+|++.|++++|++.....+|..+++.+.+.+.
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999999988843
No 242
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.37 E-value=0.00021 Score=79.17 Aligned_cols=163 Identities=11% Similarity=0.011 Sum_probs=108.9
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc---ccchhhhhHHHHHHH
Q 007862 19 MPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTITFASIAAI 95 (587)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~~~~~~~~~ 95 (587)
+|...+..++.....|+...++|.|+++..|+|..+++.+...+.++..++.+++|+++||. ..+|..+.....++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 45566778888888899999999999997789999999999999999999999999999992 267777766666655
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+. |...+.... .......+.+....+.+...++...-..+...
T Consensus 355 ~~-----------g~~~l~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~ 397 (495)
T KOG2533|consen 355 II-----------GAISLLAAA--------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLA 397 (495)
T ss_pred HH-----------HHHHHHhhc--------------------------cchHHhHHHHhcchhhHHHHHHHHhhcccccc
Confidence 51 322222211 12223333333444455555666666666655
Q ss_pred CCCcccccchhhhhhHHHHHH-HHHHHHHhhhhhhcccccchhhHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTF-TVVILITQTVLVYIQDSVSWVIGFGIP 223 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~-~~g~~i~~~~~~~i~~~~~w~~~f~i~ 223 (587)
.++ +|-+..+.+-.+. ..|.+.+++.-+.....++|...|...
T Consensus 398 g~~-----k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 398 GNT-----KALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred chH-----HhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 433 3555555555444 555555666666666667888888443
No 243
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.34 E-value=0.00064 Score=72.09 Aligned_cols=147 Identities=20% Similarity=0.187 Sum_probs=112.1
Q ss_pred hhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 34 IGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 34 ~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
.++-.+++.|+.+..|++..+++...+.+..+..++..++-++-.| +-..|.+.+..+..++ -.+..
T Consensus 253 va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~-~~~~k~Laf~a~~~il------------l~~~~ 319 (422)
T COG0738 253 VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR-IKPEKYLAFYALIAIL------------LLLAV 319 (422)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHH------------HHHHH
Confidence 5566788999998899999999999999999999999999999999 6888888887765444 22233
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
.++. + ...+.+..+.|+..+.+.|.+.+...+..|++. +.++.. -
T Consensus 320 ~l~~--------------------------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~t-----s~~s~~---l 364 (422)
T COG0738 320 ALIG--------------------------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT-----SVGSGL---L 364 (422)
T ss_pred HHhc--------------------------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc-----ccccee---e
Confidence 3333 1 234556678899999999999999999999543 133322 2
Q ss_pred HHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHH
Q 007862 194 TTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMI 228 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~ 228 (587)
.+.-+|+++-|.+-|++.|..|-...+.+...++.
T Consensus 365 ~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~ 399 (422)
T COG0738 365 VMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCY 399 (422)
T ss_pred eeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 35678999999999999999998877764333333
No 244
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.27 E-value=0.0011 Score=74.20 Aligned_cols=187 Identities=14% Similarity=0.119 Sum_probs=111.1
Q ss_pred CCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHH
Q 007862 13 PGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASI 92 (587)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~ 92 (587)
+..+|......+...+..+.-+....+....+-+..|.+... .+...+......++..++.++.|| +|||+.++.+.+
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~-~gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDR-FGRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHhHH
Confidence 456666666677777777766655555555666777766543 555555666677777888999999 599999999999
Q ss_pred HHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccc
Q 007862 93 AAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVD 172 (587)
Q Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~ 172 (587)
.+.+ ++++++........+.. .........+....+.......+..|....+.+|
T Consensus 368 ~m~~------------~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sE 422 (513)
T KOG0254|consen 368 GMSI------------CLVILAVVGVFALYYPN-------------SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSE 422 (513)
T ss_pred HHHH------------HHHHHHHHHHHhccCCC-------------cccchhHHHHHHHHHHHHHHhcccccchhhhhhc
Confidence 9988 77776654321110000 0011123334444444444455556777778899
Q ss_pred cCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 007862 173 QFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAII 232 (587)
Q Consensus 173 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~ 232 (587)
.+|.+- |+++.++......+...+-......+.+..++...|.+......+..+
T Consensus 423 ifp~~~------r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 423 IFPLRL------RSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred cCcHhH------HhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 999855 888887766555444443333333333333334444444433333333
No 245
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.10 E-value=0.00017 Score=77.24 Aligned_cols=168 Identities=13% Similarity=0.061 Sum_probs=125.4
Q ss_pred cchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcc---ccchhhhhHHHHH
Q 007862 17 KAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTY---IGRFKTITFASIA 93 (587)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~---~Gr~~~~~~~~~~ 93 (587)
+.+..+..+.+--.+++-.-..+.++|++ ++|.+-...+.+-.+--+...+.+|+.|..+||+ +||||.++.+..+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 66677777777777888777888888854 8999999888888888899999999999999975 7999999888776
Q ss_pred HHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccccc
Q 007862 94 AILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQ 173 (587)
Q Consensus 94 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 173 (587)
.+.+ +.++.+.++++.. ..++....| ...-....++++..+.=+..-..+...-++.+|.
T Consensus 111 ~i~~-----------~l~Lig~aaDig~---~lgd~~~~~------~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl 170 (498)
T KOG0637|consen 111 LIAV-----------SLFLIGYAADIGL---LLGDNERKP------VKPRAIVLFILGFWLLDVANNTLQGPCRALLADL 170 (498)
T ss_pred HHHH-----------HHhhhhhHhhhhH---HhcCCcccc------cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHh
Confidence 5554 7777777765332 222221100 1223556777788888888888888899999999
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhc
Q 007862 174 FDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYI 210 (587)
Q Consensus 174 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i 210 (587)
.-..+ +++| +.+++.....+|..+|...++|.
T Consensus 171 ~~~d~---~~~~--Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 171 ARGDA---KKTR--ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred ccChh---hhhc--cchhHHHHHHhcceeeeeccccc
Confidence 87544 1222 88888889999999998888753
No 246
>PTZ00207 hypothetical protein; Provisional
Probab=97.10 E-value=0.0072 Score=68.46 Aligned_cols=124 Identities=12% Similarity=0.082 Sum_probs=86.8
Q ss_pred HHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHH
Q 007862 405 PALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFN 484 (587)
Q Consensus 405 ~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~ 484 (587)
++.||+ .+++.+.+|.++..++.++.++.... ....+++.+.+..++.++|++...+.......
T Consensus 83 ~L~Dr~-------G~R~vllig~ll~~iG~ll~ala~~~---------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~ 146 (591)
T PTZ00207 83 FIYDYL-------GPRPIFVLSMTVFCLGTLLFALTFQE---------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVL 146 (591)
T ss_pred HHHHHh-------CcHHHHHHHHHHHHHHHHHHHHHhcc---------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346776 45577888888888888877754210 01236666777888999999999898888899
Q ss_pred hhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007862 485 KQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCAR 562 (587)
Q Consensus 485 ~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~ 562 (587)
+.+| +.||+++|+......+|+.+.+.+...+.. . +...+|++++++.++..+..+.+.+
T Consensus 147 ~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-------~----------~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 147 SVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-------D----------NTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H----------hHHHHHHHHHHHHHHHHHHHHhhee
Confidence 9998 569999999999999999865544443321 0 1235666777777766665555544
No 247
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.95 E-value=0.0083 Score=64.63 Aligned_cols=156 Identities=12% Similarity=0.063 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHh-hCCChhhHHH-HHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEE
Q 007862 36 LLANFMVYLLKE-YHMNQTSAAN-ILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTV 113 (587)
Q Consensus 36 ~~~~~~~yl~~~-~~~s~~~~~~-i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 113 (587)
.-+++..|+.++ .|++..|... +.-.+.-......++...+.|. +|.|++++++.+..++ ...++
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~------------t~~ll 88 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYII------------TWLLL 88 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHH------------HHHHH
Confidence 346788999987 8999998774 4445555556667888899999 6999999999988777 55554
Q ss_pred eeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 114 TLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
-+.. +...+-+.-+.-|++.+. ..+.++++--..|+++ -.++.++..
T Consensus 89 l~~~--------------------------sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~r 135 (412)
T PF01770_consen 89 LFGT--------------------------SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTR 135 (412)
T ss_pred HHHC--------------------------cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHH
Confidence 4444 455566666666776666 4445555555556533 555566655
Q ss_pred HHHHHHHHHHhhhhhhcc--cccchhhHHHHHHHHHHHHHHHHHhc
Q 007862 194 TTFTVVILITQTVLVYIQ--DSVSWVIGFGIPTVLMIGAIILFLVG 237 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~~i~--~~~~w~~~f~i~~~~~~~~~~~~~~~ 237 (587)
...-+|..++..++-.+. +..++...+.+......+++++.++.
T Consensus 136 aa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 136 AATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 555555555555554443 34567788888887777777665543
No 248
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.90 E-value=0.0085 Score=67.73 Aligned_cols=138 Identities=12% Similarity=0.285 Sum_probs=91.0
Q ss_pred cccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehH
Q 007862 381 PGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFW 460 (587)
Q Consensus 381 ~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~ 460 (587)
..++...+.+...+..|+++++ .|.++|| +.++.|.++..++.++.+.. .+...
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~L----SDlfGRr-------~~~i~g~~l~vvG~Iv~atA---------------~~~~~ 133 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRL----SDLFGRR-------YFFIIGSLLGVVGSIVCATA---------------QNMNT 133 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHH----HHHhcch-------HHHHHHHHHHHhHHHHhhcC---------------CcHHH
Confidence 3455566777778888876666 7777544 67888888888888887643 46667
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchh
Q 007862 461 LAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLD 540 (587)
Q Consensus 461 li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~ 540 (587)
++.+..+.++|.+.... ....+.|..|.+.|+.+.++.....-.....++.+...+.. +.+| .
T Consensus 134 ~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~------~~~W----------R 196 (599)
T PF06609_consen 134 FIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA------HSGW----------R 196 (599)
T ss_pred HHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc------CCCc----------c
Confidence 88888999998766654 45568999999999888776655444444444444433321 2356 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 007862 541 YFYFLIAGLGGLNIVYFLYCA 561 (587)
Q Consensus 541 ~~f~~~~~~~~l~~v~~~~~~ 561 (587)
+.|++.+++..++.+..+++.
T Consensus 197 w~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHh
Confidence 455655666666655444443
No 249
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.68 E-value=0.16 Score=55.41 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=47.2
Q ss_pred eeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007862 456 VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLIT 515 (587)
Q Consensus 456 ~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~ 515 (587)
.+...++.+.++-=+|.-.......-+..|..|++.||..+|.-+..+++-..+...+.-
T Consensus 354 ~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 455555556666667888888888888999999999999999999888888877765543
No 250
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.58 E-value=0.0016 Score=70.20 Aligned_cols=170 Identities=13% Similarity=0.034 Sum_probs=109.4
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhCCChhh--------HHHHHHHHHHHHHH-HhhhhHHHhhccccchhhhhHHHHHHH
Q 007862 25 NETFERLATIGLLANFMVYLLKEYHMNQTS--------AANILNIWGGVTNF-APLLGAFISDTYIGRFKTITFASIAAI 95 (587)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~--------~~~i~~~~~~~~~~-~~~~~G~laD~~~Gr~~~~~~~~~~~~ 95 (587)
.-++..+++|+.-.+...-++ .+|..+.+ .+....+...+..+ +-.+..++.|+ +|||+.-+.+.++++
T Consensus 312 ~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq~~GF~~~~ 389 (538)
T KOG0252|consen 312 TWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQLMGFFIMT 389 (538)
T ss_pred HHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHHHhhHHHHH
Confidence 334455566655444443333 33332221 22222333333333 66677888999 799999999999998
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
+ -.+.++...+.. ....+.+++.-+.+-++.-+-....-..-+|.||
T Consensus 390 i------------~~~~~~~~y~~~---------------------~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FP 436 (538)
T KOG0252|consen 390 I------------FFFVIAGPYNQL---------------------ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFP 436 (538)
T ss_pred H------------HHHHHcCCcccc---------------------cccCceeehHHHHHHHHhcCCCceeEEeehhhch
Confidence 8 444444433200 0122233333333444555555556666789999
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc-----ccchhhHHHHHHHHHHHHHHHHH
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD-----SVSWVIGFGIPTVLMIGAIILFL 235 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-----~~~w~~~f~i~~~~~~~~~~~~~ 235 (587)
++- |++.-++.....-.|+.++.....++++ ..+.+..|++....+.+.++..+
T Consensus 437 arv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~ 495 (538)
T KOG0252|consen 437 ARV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTL 495 (538)
T ss_pred HHH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeE
Confidence 854 9999999999999999999999999998 78889999998888877766543
No 251
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.57 E-value=0.02 Score=65.76 Aligned_cols=316 Identities=9% Similarity=-0.099 Sum_probs=187.2
Q ss_pred hCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCC
Q 007862 48 YHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKC 127 (587)
Q Consensus 48 ~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 127 (587)
.+..........+++.....+..++....+|-.-|+-..+..-++..++ +.+...+.+. +.
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii------------~~lG~~llai-~a------ 75 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIV------------YVVGHALLSF-GA------ 75 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH------------HHHHHHHHHh-cc------
Confidence 4455566777889999999999999999999987777777777777777 6666555442 10
Q ss_pred CCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhh
Q 007862 128 DVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 207 (587)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 207 (587)
.+...+.....+..+.+.++.++..++-+.+.+++++.. ..+.+.+..++|++..+.+.+. .+++
T Consensus 76 -----------~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf---~~~~~~~~~s~F~~fY~~iNiG-Slis 140 (654)
T TIGR00926 76 -----------IPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQF---EERQLSLRSRFFSFFYFAINAG-SLIS 140 (654)
T ss_pred -----------CcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhc---CccchhHHHHHHHHHHHHHHHH-HHHH
Confidence 112222344566888889999999999999999999853 3444667999999998887775 5666
Q ss_pred hhcccccc-hhh-------HHHHHHHHHHHHHHHHHhccceeeeeCCCCChhhhHHHHHHHHHHhccccCCCCCCCCCcc
Q 007862 208 VYIQDSVS-WVI-------GFGIPTVLMIGAIILFLVGKKLYVLVEPEGSIFSGIGQVLVAAYKKRRLTLPQGQMDHHGI 279 (587)
Q Consensus 208 ~~i~~~~~-w~~-------~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 279 (587)
..+..... +.. -++..++.+++.++.+++....++.-++.+.....+.++.....+..
T Consensus 141 ~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~-------------- 206 (654)
T TIGR00926 141 TIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTAL-------------- 206 (654)
T ss_pred HHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHH--------------
Confidence 66665433 322 23356666666666666655544333222211111111111000000
Q ss_pred ccCCCCccccccCCCCCcchhHHHHHhhhccCCCCCCCCCCCCccccccce--eeehhhhhhhhhHHHHHHHHHHhhhcc
Q 007862 280 FYDPPPKLFVLSKLPLTHQFRFLNKAAMIVDNNELKPDGTPVNQWRLCSIQ--QVEEVKCLIKIIPIWAAGIISLTSISQ 357 (587)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (587)
+..... ........|.+.... ..++.+...+++.++...+.+++.+.+
T Consensus 207 ----------------------------~~~~~~--~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~ 256 (654)
T TIGR00926 207 ----------------------------RKRFST--RSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWAL 256 (654)
T ss_pred ----------------------------HHhhcc--CCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000001223222222 234456777777777777777776665
Q ss_pred ccceeeeeeccccccCCCccccCcccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHH
Q 007862 358 QGTFTVSQAMKMNRHLGPKFQIPPGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVA 437 (587)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~ 437 (587)
+......+....+.+.+ .+...+.....++.+-.++..++...+..++..++. +...+...+.-+.+.+.++.+.+
T Consensus 257 ~~Q~~s~~~~qa~~m~~-~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~---~~~~~ls~l~k~~iG~~la~la~ 332 (654)
T TIGR00926 257 FDQQGSRWTLQATRMDG-DVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIA---KCGTRFTSLRKMAVGGLLAALSF 332 (654)
T ss_pred HhcchhHHHHHHHHhcC-ccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHH---hcCCCCChHHHHHHHHHHHHHHH
Confidence 44444444444444432 222223344566777777777777776667776652 11122456777778888888888
Q ss_pred HHHHHhhh
Q 007862 438 GLVERGRR 445 (587)
Q Consensus 438 ~~~~~~~~ 445 (587)
...+....
T Consensus 333 ~va~~ve~ 340 (654)
T TIGR00926 333 FVAALVQL 340 (654)
T ss_pred HHHHHHHH
Confidence 88777774
No 252
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.55 E-value=0.0046 Score=65.27 Aligned_cols=151 Identities=17% Similarity=0.151 Sum_probs=120.4
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHH-HHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhcccc-chhhhhHHHHHHH
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYL-LKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIG-RFKTITFASIAAI 95 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl-~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~G-r~~~~~~~~~~~~ 95 (587)
.++.++....+.....|....+...++ .+.+|+++.+.|-++...++.+.+.+..-....||..| -+-.+..++.++.
T Consensus 261 ~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~v 340 (451)
T KOG2615|consen 261 SVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIV 340 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHH
Confidence 456666666666666677777777776 45789999999999999999999999998999998633 3444555555544
Q ss_pred HhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCC
Q 007862 96 LLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFD 175 (587)
Q Consensus 96 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 175 (587)
- ..++++.+. ....++.+..+-.+.++...+|...++....|
T Consensus 341 P------------~~llls~~~--------------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~ 382 (451)
T KOG2615|consen 341 P------------AFLLLSLAR--------------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGP 382 (451)
T ss_pred H------------HHHHHhccc--------------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCC
Confidence 4 444555554 44678999999999999999999999999999
Q ss_pred CCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhccc
Q 007862 176 ATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQD 212 (587)
Q Consensus 176 ~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~ 212 (587)
+++ ||...++......++=++||.++|++..
T Consensus 383 ~~q------rG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 383 QSQ------RGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred ccc------chHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 877 9999999999999999999999998865
No 253
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.54 E-value=0.22 Score=52.84 Aligned_cols=112 Identities=8% Similarity=0.019 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC-C---CCCccCCCC
Q 007862 460 WLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHG-H---PDWLTNDID 535 (587)
Q Consensus 460 ~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~-~---~~w~~~~~~ 535 (587)
.++.++.+.++.....+...+++-+++++++.-|++|.+.+....+|+-.-..+...+.+...-+. . .+..+....
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C~~~t~~~~c~~~~ 450 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQCVLATNKVTCITKA 450 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeeccccccceeeecch
Confidence 345578888888888899999999999999999999999999999987766655555554321110 0 000000000
Q ss_pred --------Cc----chhHHHHHHHHHHHHHHHHHHHHHhhhccccCcc
Q 007862 536 --------AG----RLDYFYFLIAGLGGLNIVYFLYCARRYRYKSGIQ 571 (587)
Q Consensus 536 --------~~----~~~~~f~~~~~~~~l~~v~~~~~~~~~~~~~~~~ 571 (587)
.+ -.+.+|..-++..+++.+.+.++.++.++.+.+.
T Consensus 451 ~~~~c~~l~gtc~~~~DGYyi~s~ici~ig~i~~~~~~~ki~~Lq~~p 498 (510)
T KOG3574|consen 451 FPQLCLALGGTCLIARDGYYITSIICIVIGFIWFGLLKPKIKYLQKLP 498 (510)
T ss_pred HHHHHHHhcCEEEEEecceEEeeehhhhHHHHHHHHHHHHHHHHHhCC
Confidence 00 1133455555566667666666777777665543
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.45 E-value=0.014 Score=54.71 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=83.4
Q ss_pred ChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCC
Q 007862 51 NQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVA 130 (587)
Q Consensus 51 s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 130 (587)
++...-.-+++......+.+++++.+.++ +|.|++++++.+.+.+ -. .+...|
T Consensus 35 ~~~~G~~slai~Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~------------y~----~~~~~~---------- 87 (156)
T PF05978_consen 35 SAGLGYYSLAILYGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAI------------YI----ASFFYP---------- 87 (156)
T ss_pred cccccHHHHHHHHHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHH------------HH----HHHHhh----------
Confidence 33344455666777778888889999999 7999999999998887 11 111111
Q ss_pred CCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhh
Q 007862 131 KPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLV 208 (587)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 208 (587)
+...++.+-.+.|+|.+....+.-.++.+..++++ |++..+++....+.+..+|.++.-
T Consensus 88 -------------~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 88 -------------NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred -------------hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999988776644 777777777777777776655543
No 255
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.39 E-value=0.055 Score=59.55 Aligned_cols=160 Identities=11% Similarity=0.034 Sum_probs=101.7
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHH
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWL 461 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~l 461 (587)
+++.....++.++..|..+.+ ..|.+ +.++-++.|.++..++=+++...+.. .....+++
T Consensus 74 G~viaa~slg~~i~~liF~~W----s~k~~------~~k~Pli~s~ii~~~g~llY~~l~~~----------~~~~~y~m 133 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIW----SNKTG------SVKKPLIVSFLIAIIGNLLYLALAYV----------PNGVKYLM 133 (488)
T ss_pred hHHHHHHHHHHHhcchhhccc----ccccC------CcccCHHHHHHHHHHHHHHHHHHHhc----------ccchHHHH
Confidence 455556778888887776665 33322 23455888999988888888655542 12255667
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhH
Q 007862 462 APQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDY 541 (587)
Q Consensus 462 i~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~ 541 (587)
.++.++.|+|.+. ....=.|+.+.+-.+.|.++++.....+.+|..+|+.+.+.+...... ...|.++ ..-+.|+.
T Consensus 134 L~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~--G~~i~~~-~~~n~YTa 209 (488)
T KOG2325|consen 134 LVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK--GFMILPG-LIFNMYTA 209 (488)
T ss_pred HHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC--ceEEcCc-ceEEecch
Confidence 7788999988543 344555677766666677888887777788888888777666543211 1111221 22234566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc
Q 007862 542 FYFLIAGLGGLNIVYFLYCARRYR 565 (587)
Q Consensus 542 ~f~~~~~~~~l~~v~~~~~~~~~~ 565 (587)
.-|+.+.+.++.++...++.+|..
T Consensus 210 p~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 210 PAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred HHHHHHHHHHHHHHHHHhheeecc
Confidence 667788888888877777666543
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.33 E-value=0.013 Score=65.28 Aligned_cols=126 Identities=11% Similarity=0.182 Sum_probs=91.9
Q ss_pred ccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHH
Q 007862 386 VISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQL 465 (587)
Q Consensus 386 ~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~ 465 (587)
.+..++.+++..+ ..++.|+++|| ..+..++++..++-+..++. .+++.+.+.-
T Consensus 125 s~~~~G~~vG~~i----~g~lsD~~GRk-------~~~~~~~~~~~i~~~~~a~a---------------~~~~~~~~~R 178 (521)
T KOG0255|consen 125 SLFFLGVLVGSLI----FGPLSDRFGRK-------PVLLVSLLLFIIFGILTAFA---------------PNYWMFLIFR 178 (521)
T ss_pred HHHHHHHHHHHhh----heehHhhcccH-------HHHHHHHHHHHHHHHHHHHh---------------CcHHHHHHHH
Confidence 3444555454444 34447776544 56666666666666555543 5788888888
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHH
Q 007862 466 ILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFL 545 (587)
Q Consensus 466 ~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~ 545 (587)
++.|++........+.+..|..+++.|+.++.+ ....+.++.+++.....+.. +| ...++.
T Consensus 179 fl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W----------r~~~~~ 239 (521)
T KOG0255|consen 179 FLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW----------RWLFWI 239 (521)
T ss_pred HHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH----------HHHHHH
Confidence 999999999999999999999999999999999 88888888888887777653 45 455666
Q ss_pred HHHHHHHHHHH
Q 007862 546 IAGLGGLNIVY 556 (587)
Q Consensus 546 ~~~~~~l~~v~ 556 (587)
.....++.+++
T Consensus 240 ~~~~~~~~~~~ 250 (521)
T KOG0255|consen 240 ISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHH
Confidence 66666666555
No 257
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.80 E-value=0.05 Score=58.03 Aligned_cols=125 Identities=16% Similarity=0.084 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCch---hhHHHHH
Q 007862 421 QRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDH---MKSIANS 497 (587)
Q Consensus 421 ~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~---~rg~~~g 497 (587)
+.+..|.+++.++.+++...... .......+...+.+++.+.++|.++.=|+...+..|+++++ .|..+-.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~------~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~ 75 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP------PSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFN 75 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS------SSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc------chhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHH
Confidence 45677888888888775544210 00012234567888899999999999999999999999977 3555666
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 007862 498 LLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYK 567 (587)
Q Consensus 498 l~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~~ 567 (587)
.+....++|+.++..+.+.+.+. .++...|.+.++..+++.+.++...+++++.
T Consensus 76 ~fY~~in~G~~~~~~~~~~i~~~----------------~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 76 WFYWGINIGSLFSPTLVPYIQQN----------------YGWFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHC----------------S-HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred HHHHHHhhhhHhhcccchhhccc----------------cchhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 67788888999888777776531 1456778888888888888777666665544
No 258
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.77 E-value=0.019 Score=62.82 Aligned_cols=122 Identities=13% Similarity=0.086 Sum_probs=95.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCc--hhhHHH
Q 007862 418 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD--HMKSIA 495 (587)
Q Consensus 418 ~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~--~~rg~~ 495 (587)
..++.+..|-+++.++.++++... ..+...+.++++++++|.++.=|+......+++|+ ..|..+
T Consensus 90 G~~~tI~lGail~~iGh~~L~~~~-------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~g 156 (498)
T COG3104 90 GTRRTIVLGAILMAIGHLVLAISS-------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGG 156 (498)
T ss_pred chhHHHHHHHHHHHHHHHHHhccc-------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCC
Confidence 444678888888888888877431 13456788889999999999999999999999994 346667
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 007862 496 NSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRYKS 568 (587)
Q Consensus 496 ~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~~~ 568 (587)
.++..+.-++|+.+++.+.+.+.... ++...|.+.++-+.++.+.++++.|+.+...
T Consensus 157 Ft~fY~~iNiGsl~~p~i~~~~~~~~----------------g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 157 FTLFYMGINIGSLIAPIITGLLAINY----------------GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred ccEEEEEeehHHHHHHHHHHHHHHhh----------------CHHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 78888888899999999888876422 3567788888888889999988877665543
No 259
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.74 E-value=0.052 Score=62.28 Aligned_cols=169 Identities=13% Similarity=0.125 Sum_probs=109.7
Q ss_pred cccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHh--hh--c------c--c
Q 007862 381 PGTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERG--RR--A------S--A 448 (587)
Q Consensus 381 ~~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~--~~--~------~--~ 448 (587)
++.+...+-++..+...++.+. ..|. ++.+.++.|.++++++.++..+-... .+ + . .
T Consensus 134 sG~I~s~~dig~~l~i~fVsYf----G~r~-------HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~ 202 (735)
T KOG3626|consen 134 SGLIASSYDIGNLLLIIFVSYF----GSRG-------HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVEN 202 (735)
T ss_pred ceeEeeecccchhhhhHhHHHh----cccc-------CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccC
Confidence 3444455556666666554444 4443 55577889999998888877653211 00 0 0 0
Q ss_pred c--------------------cCC---Ccce--eehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHH
Q 007862 449 H--------------------LHP---MSQV--SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSF 503 (587)
Q Consensus 449 ~--------------------~~~---~~~~--s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~ 503 (587)
+ ++. .... .+..++++-++.|+|+.-..+....|..|.+-++..+.+.|+.+...
T Consensus 203 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~ 282 (735)
T KOG3626|consen 203 PSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMA 282 (735)
T ss_pred CccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHH
Confidence 0 000 0111 22245567789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccc-cc--------CCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 504 GFASYLSSLLITIVHGVT-AR--------HGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRY 566 (587)
Q Consensus 504 ~lg~~l~~~l~~~v~~~~-~~--------~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~ 566 (587)
.+|-++|..+........ +. ..++.|+ |-...-|.+.+++.++.++.++++-++.++
T Consensus 283 ~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWI------GAWWlGFLi~g~~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 283 ILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWI------GAWWLGFLICGALLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchh------hHHHHHHHHHHHHHHHHHHHHHhCcccCcc
Confidence 999999888877765432 11 1234453 223345667777777777777777665543
No 260
>PRK03612 spermidine synthase; Provisional
Probab=95.66 E-value=0.084 Score=59.20 Aligned_cols=175 Identities=7% Similarity=-0.056 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhh-HHHHHHHHhhhc
Q 007862 22 ILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTIT-FASIAAILLAEH 100 (587)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~-~~~~~~~~~~~~ 100 (587)
+....++..++-.+.-....-.+...+|-+..+.+.+++++.+++.++..++|+++++- -|+.... ++..+...+
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~--- 94 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGL--- 94 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHH---
Confidence 34444444444444444555566667899999999999999999999999999987552 3332211 111111110
Q ss_pred ccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccCCCCCcc
Q 007862 101 FVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDE 180 (587)
Q Consensus 101 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~ 180 (587)
+..++....... ......++...++.++-.|+..|....+..+...+
T Consensus 95 --------~~~ll~~~~~~~---------------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~---- 141 (521)
T PRK03612 95 --------SALILYAAFAFQ---------------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQ---- 141 (521)
T ss_pred --------HHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----
Confidence 110110100000 00112233444566677777777666655442221
Q ss_pred cccchhhhhhHHHHHHHHHHHHHhhhhhhccc-ccch-hhHHHHHHHHHHHHHHHHHh
Q 007862 181 GVKGINSFFNWYYTTFTVVILITQTVLVYIQD-SVSW-VIGFGIPTVLMIGAIILFLV 236 (587)
Q Consensus 181 ~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~-~~~w-~~~f~i~~~~~~~~~~~~~~ 236 (587)
.-++..+..|...++|+++|.++.+++.- ..|- +..+.+..+..++++++++.
T Consensus 142 ---~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~ 196 (521)
T PRK03612 142 ---HLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWL 196 (521)
T ss_pred ---chhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 13566788888899999999988887654 4563 45555555544545444333
No 261
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.49 E-value=0.7 Score=51.12 Aligned_cols=163 Identities=8% Similarity=-0.017 Sum_probs=87.9
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCC-----hhhHHHHHHHHHHHHHHH-hhhhHHHhhccccchhhhhH
Q 007862 16 WKAMPYILGNETFERLATIGLLANFMVYLLKEYHMN-----QTSAANILNIWGGVTNFA-PLLGAFISDTYIGRFKTITF 89 (587)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s-----~~~~~~i~~~~~~~~~~~-~~~~G~laD~~~Gr~~~~~~ 89 (587)
+|.++...+.-+|--++|+.+-. +...+..+ .....++-....+.+.+. .++-+++++| ++|+|++.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~-~~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNI-LSKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCHHHhHHH
Confidence 44444444444444444442222 45555553 245556666555555544 7888999999 599999888
Q ss_pred HHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCccc-----CCc----------chhHHHHHHHHHH
Q 007862 90 ASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCK-----SAN----------SMQLGVLVMGLGL 154 (587)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----------~~~~~~~~~~~~l 154 (587)
....+.+ -.++.++.- .| ..+.-||. ..|+ .+. ......+++.--+
T Consensus 80 ~~~~F~~------------~f~lF~~vl-~p-----~~~~~~p~-~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~el 140 (472)
T TIGR00769 80 VISPFLG------------FFALFAFVI-YP-----LSDLLHPT-ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAEL 140 (472)
T ss_pred HHHHHHH------------HHHHHHHHH-hc-----chhhcCCc-HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHH
Confidence 6665555 332222210 00 00111111 0000 000 0111122222111
Q ss_pred HHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcc
Q 007862 155 LSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ 211 (587)
Q Consensus 155 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~ 211 (587)
.|.-...-.-.+++.|.++.+| -.|+++.++.+.|+|..+++.+..++.
T Consensus 141 --w~~~vvS~lFW~fandi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 141 --WGSVVLSLLFWGFANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred --HHHHHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222256778999998765 788999999999999999999988875
No 262
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.47 E-value=0.18 Score=50.91 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=63.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHH
Q 007862 418 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANS 497 (587)
Q Consensus 418 ~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~g 497 (587)
.+...+.+|.+...+++.+......++ ....+.|.+.....+.+.+.............+.+|+ .||++.|
T Consensus 64 gp~~~l~iG~~~~~~GY~~~~l~~~~~--------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvg 134 (250)
T PF06813_consen 64 GPWVVLLIGAVLGFVGYGLLWLAVSGR--------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVG 134 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCc--------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceeh
Confidence 455567777777777776655443211 1124555555555666677777777777778899996 5999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 007862 498 LLFCSFGFASYLSSLLITIVH 518 (587)
Q Consensus 498 l~~~~~~lg~~l~~~l~~~v~ 518 (587)
+.-...++++.+-+.+...+.
T Consensus 135 ilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 135 ILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred hhhHHHHhHHHHHHHHHHHHc
Confidence 999999999888777665554
No 263
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.47 E-value=0.023 Score=47.49 Aligned_cols=66 Identities=9% Similarity=0.024 Sum_probs=57.6
Q ss_pred HHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeec
Q 007862 39 NFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTA 117 (587)
Q Consensus 39 ~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 117 (587)
.+.+.+.++.++|.++++++.+...+++.++.+...++.++ ..+++.+..++++..+ ..+.++++.
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~-~~~~~~~~~~l~~~~~------------~~~~ma~~~ 78 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRH-SRPRRLLRAGLLLTVL------------STAAMALTH 78 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHH------------HHHHHHHHh
Confidence 34556899999999999999999999999999999999999 5889999999998888 776666654
No 264
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.32 E-value=0.036 Score=59.82 Aligned_cols=156 Identities=15% Similarity=0.099 Sum_probs=90.5
Q ss_pred HhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhh-hhHHHHHHHHhhhcccccccccce-EEEeeeccCCCCC
Q 007862 46 KEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKT-ITFASIAAILLAEHFVTKYQGKGM-LTVTLTAWLPQLH 123 (587)
Q Consensus 46 ~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~-~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~ 123 (587)
..-|++...+|.+.....++..++..++|.++||. ...|. ..+......+ +. .+...+.. +
T Consensus 294 ~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v------------~~~~l~~~t~~-~--- 356 (480)
T KOG2563|consen 294 CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALV------------GTLMLLTCTLF-L--- 356 (480)
T ss_pred ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHH------------HHHHHHHhhcc-C---
Confidence 35578888999999999999999999999999995 55444 4444333333 31 11111110 0
Q ss_pred CCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhccccccccccccccccC-CCCCcccccchhhhhhHHHHHHHHHHHH
Q 007862 124 PPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQF-DATTDEGVKGINSFFNWYYTTFTVVILI 202 (587)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~g~~i 202 (587)
+ ....++.-..+.|+..-+..|.-.-+.+|.. |..| +.-.|......++-+.+
T Consensus 357 ---~----------------~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSsGll~~~gq~f~~~ 410 (480)
T KOG2563|consen 357 ---G----------------DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSSGLLNLSGQIFGVI 410 (480)
T ss_pred ---C----------------ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccceeEEeehhHHHHH
Confidence 0 2234555667778888888999998888884 4432 22333333344444444
Q ss_pred Hhhhhhhcccccc---hhh-HHHHHHHHHHHHHHHHHhccceeeee
Q 007862 203 TQTVLVYIQDSVS---WVI-GFGIPTVLMIGAIILFLVGKKLYVLV 244 (587)
Q Consensus 203 ~~~~~~~i~~~~~---w~~-~f~i~~~~~~~~~~~~~~~~~~~~~~ 244 (587)
-.++-+...+..+ |.. .-+...+...+.+++..+.+++|++.
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 411 LVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred HHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 4455555555544 333 22223344444555555666666443
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.96 E-value=0.0053 Score=69.03 Aligned_cols=168 Identities=12% Similarity=0.091 Sum_probs=3.0
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHH----Hhhh------------
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVE----RGRR------------ 445 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~----~~~~------------ 445 (587)
+.+...+-++.++...++.++ .+|- ++.+.++.|.++++++.+++.+-. ....
T Consensus 41 G~i~s~~di~~~~~~~~vsy~----g~~~-------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~ 109 (539)
T PF03137_consen 41 GLISSSYDIGSLVVVLFVSYF----GGRG-------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSI 109 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hhhc-------CCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccc
Confidence 344445556666666665554 4432 556788888888888887766421 0000
Q ss_pred --ccc--------c-----c----CCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHH
Q 007862 446 --ASA--------H-----L----HPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFA 506 (587)
Q Consensus 446 --~~~--------~-----~----~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg 506 (587)
... . . ......-+.+++++-++.|+|..-..+...+|..|.++++..+.+.|+.+....+|
T Consensus 110 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lG 189 (539)
T PF03137_consen 110 SSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILG 189 (539)
T ss_dssp ------------------------------------------SSS-----------------------------------
T ss_pred ccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhcc
Confidence 001 0 0 00112234556778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc----cc--------cCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 507 SYLSSLLITIVHGV----TA--------RHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARRYRY 566 (587)
Q Consensus 507 ~~l~~~l~~~v~~~----~~--------~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~~~~ 566 (587)
..+|..+.+.+... .. ...++.|+. -...-|.+.+.+.++.++.+..+-|+..+
T Consensus 190 Pa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvG------AWWLGfli~g~~~~l~aipl~~FPk~lp~ 255 (539)
T PF03137_consen 190 PALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVG------AWWLGFLICGILLFLSAIPLFFFPKKLPG 255 (539)
T ss_dssp ------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHH------HHHHHHHHHHHHHHHHHHHHHcCCccCCC
Confidence 99887777665532 11 112344432 12234455666666666666666554433
No 266
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.94 E-value=0.02 Score=63.06 Aligned_cols=152 Identities=13% Similarity=0.162 Sum_probs=115.5
Q ss_pred CCccchhHHHHHHHHHHHHhh-hhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhH-HHhhccccchhhhhHHH
Q 007862 14 GGWKAMPYILGNETFERLATI-GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGA-FISDTYIGRFKTITFAS 91 (587)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G-~laD~~~Gr~~~~~~~~ 91 (587)
++-|.++.+....++...--. +-.-.++.|+...+++++.+.+...+..+....+++++.. .+.-. +|-|+++.+|+
T Consensus 237 ~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl 315 (463)
T KOG2816|consen 237 GPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGL 315 (463)
T ss_pred CCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHH
Confidence 344555554444443333322 2221446788889999999999999999999999999988 55666 79999999999
Q ss_pred HHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccccc
Q 007862 92 IAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPFGV 171 (587)
Q Consensus 92 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 171 (587)
....+ +.++.+++. +.++.+....+. ...+...|...++.+
T Consensus 316 ~~~~~------------~~~~~af~~--------------------------~~w~~~~~~v~~-~~~~~~~pa~~s~~s 356 (463)
T KOG2816|consen 316 LSEFL------------QLLLFAFAT--------------------------ETWMMFAAGVVV-ALAGIVFPAIRAFAS 356 (463)
T ss_pred HHHHH------------HHHHHHHhc--------------------------cchhhhHHHHHH-HhhcchhHHHHhHHH
Confidence 99999 888888866 455666665544 445666888999999
Q ss_pred ccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcc
Q 007862 172 DQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQ 211 (587)
Q Consensus 172 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~ 211 (587)
.+.++++ +|+.+++......+...++|.+-+.+.
T Consensus 357 ~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 357 ILVSPEE------QGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred hhccccc------ccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 9988866 999999999999999999999877663
No 267
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.22 E-value=9.3 Score=39.87 Aligned_cols=116 Identities=11% Similarity=0.032 Sum_probs=73.2
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHHhhC--------------CChhhHHHHHHHHHHHHHHHhhhhHHHhhccccc
Q 007862 18 AMPYILGNETFERLATIGLLANFMVYLLKEYH--------------MNQTSAANILNIWGGVTNFAPLLGAFISDTYIGR 83 (587)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~--------------~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr 83 (587)
....-.+..+|++++|..+.+-.---+.++.+ -.....|.++..-.+-..+.-+.+-+.-||+ --
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rf-pf 91 (409)
T KOG3880|consen 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRF-PF 91 (409)
T ss_pred cchHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhc-cc
Confidence 44555677788888887555543333333332 1111244455444555555566666778884 44
Q ss_pred hhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccc
Q 007862 84 FKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIR 163 (587)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~ 163 (587)
-+=+.+..++.+. |+++.+++. +.++-++|..+.+++.|.-.
T Consensus 92 ~~Ri~~~v~~sa~------------s~~lVafs~--------------------------s~~~sL~GV~~aSissGlGE 133 (409)
T KOG3880|consen 92 GFRIALVVLLSAL------------SFFLVAFSN--------------------------SVPMSLLGVVFASISSGLGE 133 (409)
T ss_pred chHHHHHHHHHhc------------ceEEEEecc--------------------------chhHHHhhhhhhhhcCCcce
Confidence 4445666677778 999999987 66778888889999988877
Q ss_pred ccccccccc
Q 007862 164 PCSIPFGVD 172 (587)
Q Consensus 164 ~~~~~~~~~ 172 (587)
..-.++-+.
T Consensus 134 iTFL~lss~ 142 (409)
T KOG3880|consen 134 ITFLALSSR 142 (409)
T ss_pred eehhhhhcc
Confidence 666554443
No 268
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.36 E-value=0.59 Score=51.08 Aligned_cols=137 Identities=10% Similarity=0.108 Sum_probs=105.4
Q ss_pred hhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEe
Q 007862 35 GLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVT 114 (587)
Q Consensus 35 ~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 114 (587)
+.-..+..|++.+ |+|+...|..=+.-.+....+..+..++-+| +|-.|+=++++..... ...+..
T Consensus 276 sf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r-iGlvr~G~~~l~~q~~------------~L~~~v 341 (432)
T PF06963_consen 276 SFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR-IGLVRAGLWSLWWQWV------------CLALCV 341 (432)
T ss_pred cCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcchhhHHHHHHHHHH------------HHHHHH
Confidence 3345577888877 9999999999999999999999999999999 6999999999886554 333322
Q ss_pred eeccCCCCCCCCCCCCCCCCCcccCC-cchhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHH
Q 007862 115 LTAWLPQLHPPKCDVAKPPFGQCKSA-NSMQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYY 193 (587)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 193 (587)
.+-+.|. ++ +..+...++.+..+--+|-=++--+...++-|..|+++ ||...+...
T Consensus 342 ~~~~~~~-----------------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~ 398 (432)
T PF06963_consen 342 VSFWAPG-----------------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQN 398 (432)
T ss_pred HHHhcCC-----------------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHH
Confidence 2222221 01 23356677777777779999999999999999999865 999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 007862 194 TTFTVVILITQTVLV 208 (587)
Q Consensus 194 ~~~~~g~~i~~~~~~ 208 (587)
...++--.+-..++-
T Consensus 399 sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 399 SLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888887766654
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=92.25 E-value=1.5 Score=48.02 Aligned_cols=118 Identities=19% Similarity=0.177 Sum_probs=75.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhC---CchhhHH
Q 007862 418 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQF---PDHMKSI 494 (587)
Q Consensus 418 ~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~---P~~~rg~ 494 (587)
+++.-+++|.++..++.+.++.... ...+.......+++..+|.++.....-+...|.. |.+ +|.
T Consensus 57 rr~~Y~~i~~~~~~~~~~~~~~~~~-----------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~ 124 (433)
T PF03092_consen 57 RRKPYMIIGWLLGAVSALVLALLPA-----------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-RGD 124 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHhccc-----------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHH
Confidence 3445566666666555555544321 1124444555667788888888888777777666 333 778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007862 495 ANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 563 (587)
Q Consensus 495 ~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~ 563 (587)
..+.......+|+.++..+.+.+.+.. ++...|.+.+.+.++..+..+++.+|
T Consensus 125 lqS~~~~~~~~G~lv~~~l~G~l~~~~----------------~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 125 LQSFVWGVRSVGSLVGSLLSGPLLDSF----------------GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcC----------------CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 888888899999999988887765422 12234566666666666666666555
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=91.88 E-value=1.9 Score=40.37 Aligned_cols=62 Identities=15% Similarity=0.263 Sum_probs=54.0
Q ss_pred eehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007862 457 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVH 518 (587)
Q Consensus 457 s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~ 518 (587)
+.+.+.+.-++.|++.+......-.+..+...++.+++..|+.....+.+.++|..+.-.+.
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667888899999999999999999999999999999999999999988888876655443
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=87.05 E-value=49 Score=35.86 Aligned_cols=58 Identities=22% Similarity=0.188 Sum_probs=47.4
Q ss_pred eehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHH
Q 007862 457 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLI 514 (587)
Q Consensus 457 s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~ 514 (587)
+-+|.+....++++..+-.......++.+.+|++++..+..+..+.-..|-..|+.+.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 5567777888999999999999999999999999999988887777666666665443
No 272
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=86.15 E-value=3.4 Score=45.15 Aligned_cols=128 Identities=10% Similarity=0.019 Sum_probs=84.4
Q ss_pred ccccccchhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC--Ccceeeh
Q 007862 382 GTVGVISMITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHP--MSQVSVF 459 (587)
Q Consensus 382 ~~~~~i~~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~--~~~~s~~ 459 (587)
+..+....+..++.+|+.+...|+--.|++|| +..+..+.....+++++.++..+...-.++... .-.-...
T Consensus 70 S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRR------RPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~ 143 (498)
T KOG0637|consen 70 SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRR------RPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIV 143 (498)
T ss_pred cccccccccccceecccccccccccccccccc------cchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHH
Confidence 44555667777888888888855555555443 355777777788888877766543222111110 1112233
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHH-HHHHHHHHHHHHHHHHHHHHH
Q 007862 460 WLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSI-ANSLLFCSFGFASYLSSLLIT 515 (587)
Q Consensus 460 ~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~-~~gl~~~~~~lg~~l~~~l~~ 515 (587)
..++.+-+.=++.-.+..+.=++..+...++.|-+ +++.+.+...+|+.+|-++.+
T Consensus 144 ~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 144 LFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 34445556666776777777888888888777777 999999999999999876665
No 273
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=85.82 E-value=11 Score=40.08 Aligned_cols=95 Identities=13% Similarity=-0.013 Sum_probs=52.0
Q ss_pred ceeehHHHHHHHHHHHHHHHHhhhhHHHHH-----hhCCchhhHHHHHHHH-HHHHHHHHHHHHHHHhhhcccccCCCCC
Q 007862 455 QVSVFWLAPQLILMGFCEAFNIIGQIEFFN-----KQFPDHMKSIANSLLF-CSFGFASYLSSLLITIVHGVTARHGHPD 528 (587)
Q Consensus 455 ~~s~~~li~~~~l~~~ge~~~~~~~~~~~~-----~~~P~~~rg~~~gl~~-~~~~lg~~l~~~l~~~v~~~~~~~~~~~ 528 (587)
..+...+.++-++.|++..+.+...-++.. +.+|++..+...+... +.+.+-.+++..+...+.+..
T Consensus 118 ~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~------- 190 (354)
T PF05631_consen 118 SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWF------- 190 (354)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHh-------
Confidence 457778888999999999998887666554 3445554444444333 334444444444444433211
Q ss_pred CccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 007862 529 WLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCARR 563 (587)
Q Consensus 529 w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~~ 563 (587)
. .+...+|.....+.+++.++.....+|
T Consensus 191 ------~-~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 191 ------G-FGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred ------C-CCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 0 112345666666666666554433333
No 274
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=84.44 E-value=43 Score=37.19 Aligned_cols=58 Identities=12% Similarity=-0.045 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHhh-hhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 007862 461 LAPQLILMGFCEAFNII-GQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVH 518 (587)
Q Consensus 461 li~~~~l~~~ge~~~~~-~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~ 518 (587)
....|+...+-...... ..+.+++|....++..+.-++.....++|..+++.+...+.
T Consensus 131 ~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 131 FALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555544444444 88999999999999999999999999999999998877665
No 275
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=83.88 E-value=6.8 Score=41.13 Aligned_cols=121 Identities=15% Similarity=-0.001 Sum_probs=75.2
Q ss_pred ccCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHHhhccccchhhhhH
Q 007862 10 QKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFISDTYIGRFKTITF 89 (587)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~ 89 (587)
+++++.-|.++++...-++...+ |.-..++-..+..++| ..+.+.+ .......+++.+.+..+ +|-|.++.+
T Consensus 22 r~~~~~~knv~i~s~~fl~~f~a-~~gl~nlq~~vn~~lg--~~sl~~~----y~~l~~s~m~~~~~Ir~-~g~K~tm~l 93 (390)
T KOG3097|consen 22 RKRLGILKNVLILSIAFLLTFTA-YLGLQNLQTSVNYDLG--TVSLGAL----YLSLIDSSMFMPLLIRF-LGTKWTMVL 93 (390)
T ss_pred ccccchhhhhhHHHHHHHHHHHH-HHHHHHHHHHHhcCcc--cchhhhh----hHHHHHHHHHHHHHHHH-HhhHHHHHH
Confidence 34455567777766655555444 4445565555554333 3333333 33344445555577777 699999999
Q ss_pred HHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchhHHHHHHHHHHHHhcccccccccccc
Q 007862 90 ASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQLGVLVMGLGLLSIGTGGIRPCSIPF 169 (587)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 169 (587)
+...+.+ -. +..+. ..+-.++.+-...|+|++.+...-.++
T Consensus 94 av~~Y~l------------yi-----A~Nl~----------------------pr~~tlVPa~~~~G~aa~p~W~SkgtY 134 (390)
T KOG3097|consen 94 AVFPYAL------------YI-----AANLE----------------------PRYETLVPAGLVLGMAAGPIWASKGTY 134 (390)
T ss_pred HHHHHHH------------HH-----Hhhcc----------------------hhHHhhccHHHhhccccccccccCcce
Confidence 9988777 21 22111 144557888888999999999888888
Q ss_pred ccccCCCC
Q 007862 170 GVDQFDAT 177 (587)
Q Consensus 170 ~~~~~~~~ 177 (587)
+++.-+..
T Consensus 135 lT~~g~~y 142 (390)
T KOG3097|consen 135 LTPMGQNY 142 (390)
T ss_pred ecHHHHHH
Confidence 87766543
No 276
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.81 E-value=15 Score=40.55 Aligned_cols=114 Identities=15% Similarity=0.105 Sum_probs=74.2
Q ss_pred HHhhhhHHH---hhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccCCCCCCCCCCCCCCCCCcccCCcchh
Q 007862 68 FAPLLGAFI---SDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWLPQLHPPKCDVAKPPFGQCKSANSMQ 144 (587)
Q Consensus 68 ~~~~~~G~l---aD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (587)
++..+.+.+ .++ +||++++.++.++..+ +.++..+.. |- |+.-.|+-.....-..+
T Consensus 294 ~~g~~~~~l~~rir~-fg~~~~~~~~~~~~~~------------~~~li~l~~--p~------dap~~~t~~~~~~~~~~ 352 (461)
T KOG3098|consen 294 IGGLDFSILSKRIRG-FGRKPTVLIGIIIHLI------------GFLLIHLSF--PN------DAPLRPTDSPPLLFTPS 352 (461)
T ss_pred HHHHHHHHHhhhhhh-cccCcchhHHHHHHHH------------HHHHHhccc--cc------cCCCCCCcccccccccc
Confidence 344444555 466 5999999999999888 665544432 11 11111222222222224
Q ss_pred HHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhh
Q 007862 145 LGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVY 209 (587)
Q Consensus 145 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 209 (587)
.....+.-++.|++-+......+.++++..|+ .|..+++++-.-..++..+.......
T Consensus 353 ~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~-------~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 353 YYLALIIGFLLGFGDACFNTQRYVIIALLYPD-------DRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC-------chHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 55566666889999999999999999999964 27888888888777777766554443
No 277
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=80.64 E-value=51 Score=35.92 Aligned_cols=63 Identities=14% Similarity=0.124 Sum_probs=47.6
Q ss_pred eeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007862 456 VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 519 (587)
Q Consensus 456 ~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~ 519 (587)
.++.++-+.-++.|++.+. -..-++|.+..+|++.--+++|......-+|..+++.+.-.+..
T Consensus 92 ~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666666666666554 55677889999998888889988888888888888887776653
No 278
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=78.91 E-value=3.1 Score=42.14 Aligned_cols=74 Identities=16% Similarity=0.246 Sum_probs=51.6
Q ss_pred cCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhCCChhhHHHHHHHHHHHHHHHhhhhHHH---------hhccc
Q 007862 11 KKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYHMNQTSAANILNIWGGVTNFAPLLGAFI---------SDTYI 81 (587)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~s~~~~~~i~~~~~~~~~~~~~~~G~l---------aD~~~ 81 (587)
|..++|+.+.+..+ -+.+.+.-.....++..|++ +.|.++.+.+.+..+....-.+..++-|.. .|| +
T Consensus 12 kPigr~svf~yGvG-HmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr-~ 88 (412)
T KOG4830|consen 12 KPIGRTSVFAYGVG-HMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDR-I 88 (412)
T ss_pred Ccccceeeeeechh-HHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhh-h
Confidence 33577776655432 23344444445567777755 678888888888888889999999988754 578 6
Q ss_pred cchhhh
Q 007862 82 GRFKTI 87 (587)
Q Consensus 82 Gr~~~~ 87 (587)
|||+..
T Consensus 89 G~~~~w 94 (412)
T KOG4830|consen 89 GRRMSW 94 (412)
T ss_pred cceeee
Confidence 999754
No 279
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=75.81 E-value=93 Score=34.64 Aligned_cols=141 Identities=9% Similarity=0.002 Sum_probs=78.8
Q ss_pred HHHhhCCC---hhhHHHHHHHHHH-HHHHHhhhhHHHhhccccchhhhhHHHHHHHHhhhcccccccccceEEEeeeccC
Q 007862 44 LLKEYHMN---QTSAANILNIWGG-VTNFAPLLGAFISDTYIGRFKTITFASIAAILLAEHFVTKYQGKGMLTVTLTAWL 119 (587)
Q Consensus 44 l~~~~~~s---~~~~~~i~~~~~~-~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 119 (587)
++..+.++ ......+-...-. .+.+..++-+++.++ .-|.+++.+-+..+.. -.++.++.-
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~-lt~~~vF~~~~~~F~~------------fF~LFa~Vi-- 113 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNI-LTREKVFYIILGFFLG------------FFALFAFVI-- 113 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhh-cCHHHHHHHHHHHHHH------------HHHHHHHHH--
Confidence 34445444 3334444444444 466778888999999 5999998877665555 333333322
Q ss_pred CCCCCCCCCCCCCCC-----CcccCCc----------chhHHHH-HHHHHHHHhccccccccccccccccCCCCCccccc
Q 007862 120 PQLHPPKCDVAKPPF-----GQCKSAN----------SMQLGVL-VMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVK 183 (587)
Q Consensus 120 ~~~~~~~~~~~~~~~-----~~~~~~~----------~~~~~~~-~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 183 (587)
.|.++.-||++ .+..+|. ..+...+ +++-+--.+- ..-.-..+..|+++.+|
T Consensus 114 ----~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV---~S~lFw~faNeitt~~e----- 181 (509)
T COG3202 114 ----YPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLV---LSLLFWQFANEITTIEE----- 181 (509)
T ss_pred ----hccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhhHHH-----
Confidence 13334444331 1111221 1122222 2221111111 11123456677777655
Q ss_pred chhhhhhHHHHHHHHHHHHHhhhhhhccc
Q 007862 184 GINSFFNWYYTTFTVVILITQTVLVYIQD 212 (587)
Q Consensus 184 ~r~~~~~~~~~~~~~g~~i~~~~~~~i~~ 212 (587)
-.|+++.++...|++..++..+..++.+
T Consensus 182 -akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 182 -AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred -hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7889999999999999999998888765
No 280
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=70.18 E-value=41 Score=37.48 Aligned_cols=41 Identities=10% Similarity=-0.031 Sum_probs=24.8
Q ss_pred hhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007862 477 IGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIV 517 (587)
Q Consensus 477 ~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v 517 (587)
.+.-.++..+..++.++-++-.....+..|-+++-.+.-.+
T Consensus 137 IAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 137 IAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred ceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 34444555666677777777776666666666655444333
No 281
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=69.65 E-value=27 Score=37.85 Aligned_cols=110 Identities=12% Similarity=0.115 Sum_probs=62.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHH
Q 007862 418 TLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANS 497 (587)
Q Consensus 418 ~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~g 497 (587)
+...|+....++..+++++..+. .+.+.-+++.++.+++.++.=.....+.. -+|+ ...+
T Consensus 87 ~y~~Ri~~~~~l~~~g~l~va~~---------------~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----~~l~ 146 (402)
T PF02487_consen 87 PYWIRILICVALSAAGMLLVAFS---------------PSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----SSLS 146 (402)
T ss_pred cchHHHHHHHHHHHHHHhheeec---------------cchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----cccc
Confidence 44567777788888888877643 24444455566665555554455555433 3443 3456
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 007862 498 LLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCAR 562 (587)
Q Consensus 498 l~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~~ 562 (587)
-|....+.++.+|+..-..+.. . ++ .....+.....+.++..+.+++..+
T Consensus 147 ~wssGTG~aGl~Ga~~y~~lT~-~------g~--------s~~~tll~~~~lp~~~~~~~f~~L~ 196 (402)
T PF02487_consen 147 AWSSGTGGAGLVGALYYLGLTT-L------GL--------SPRTTLLIMLVLPAIFLLSYFFLLP 196 (402)
T ss_pred cccCCcChhhHHHHHHHHHHHH-h------Cc--------CHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 6666677777777765443332 1 11 2334555666666555555555443
No 282
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=69.10 E-value=2e+02 Score=32.22 Aligned_cols=49 Identities=10% Similarity=-0.092 Sum_probs=40.9
Q ss_pred HHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007862 471 CEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 519 (587)
Q Consensus 471 ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~ 519 (587)
|.....-..+.++++..+.++..+.-++.....++|..+++.+...+..
T Consensus 157 gsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 157 GSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444579999999999999999999999999999999988877664
No 283
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=66.62 E-value=48 Score=32.00 Aligned_cols=62 Identities=16% Similarity=0.161 Sum_probs=47.0
Q ss_pred eehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCc-hhhHHHHHHHHH-HHHHHHHHHHHHHHhhh
Q 007862 457 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPD-HMKSIANSLLFC-SFGFASYLSSLLITIVH 518 (587)
Q Consensus 457 s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~-~~rg~~~gl~~~-~~~lg~~l~~~l~~~v~ 518 (587)
+.+.+.......+++.+...+....+..+..|+ ..|+...+.... ...++..+++.+.+.+.
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555668889999999999999999998 678888888777 56677777775555544
No 284
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=65.72 E-value=1.1e+02 Score=31.21 Aligned_cols=59 Identities=15% Similarity=0.204 Sum_probs=38.9
Q ss_pred cchhhhhhHHHHHHHHHHHHHhhhhhhc---cc--ccchhhHHHHHHHHHHHHHHHHHhcccee
Q 007862 183 KGINSFFNWYYTTFTVVILITQTVLVYI---QD--SVSWVIGFGIPTVLMIGAIILFLVGKKLY 241 (587)
Q Consensus 183 ~~r~~~~~~~~~~~~~g~~i~~~~~~~i---~~--~~~w~~~f~i~~~~~~~~~~~~~~~~~~~ 241 (587)
|+|+....+..++.|+|+.+.-...-.- .+ .-.|++++.+.+.+..+-++++.+..++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4577777777888999998764432111 11 13499999998888777777765554443
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=64.39 E-value=9.1 Score=39.20 Aligned_cols=85 Identities=14% Similarity=0.171 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHH
Q 007862 143 MQLGVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGI 222 (587)
Q Consensus 143 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i 222 (587)
+++..-+++.++.-...|.+.|.+.-+=....|+++ |.+.++|+..-.|+-.-++-...-.=....+-|..|.+
T Consensus 342 es~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~i 415 (454)
T KOG4332|consen 342 ESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGI 415 (454)
T ss_pred CCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhh
Confidence 355555778888888999999999888888888755 99999999988887666553221111112456789999
Q ss_pred HHHHHHHHHHH
Q 007862 223 PTVLMIGAIIL 233 (587)
Q Consensus 223 ~~~~~~~~~~~ 233 (587)
+.+.+.++.++
T Consensus 416 cS~~~~~a~i~ 426 (454)
T KOG4332|consen 416 CSAFLFVASIL 426 (454)
T ss_pred hHHHHHHHHHH
Confidence 88887777554
No 286
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=62.58 E-value=8.1 Score=42.41 Aligned_cols=56 Identities=11% Similarity=0.065 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhh
Q 007862 146 GVLVMGLGLLSIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVL 207 (587)
Q Consensus 146 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~ 207 (587)
+..++..++.|+..|-.......+..+..++++ |..+-++.....++|..+|..++
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666888999999999999998888877543 67777776677777777776543
No 287
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=58.01 E-value=2.9e+02 Score=30.33 Aligned_cols=59 Identities=15% Similarity=0.198 Sum_probs=49.2
Q ss_pred eehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 007862 457 SVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLIT 515 (587)
Q Consensus 457 s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~ 515 (587)
+-++.++..+++|+..+........+..+.+++++|..+..+..++-.+|-..|+.+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566889999999999999999999999999999999988888888888776543
No 288
>PRK03612 spermidine synthase; Provisional
Probab=52.92 E-value=2.4e+02 Score=31.79 Aligned_cols=53 Identities=8% Similarity=0.080 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007862 466 ILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 519 (587)
Q Consensus 466 ~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~ 519 (587)
++.++..+...|.......+... +.-|...|-....+.+|+.+|+.+.+.+.-
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 44566666666766665544322 223566777778889999999988777663
No 289
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=52.31 E-value=3.8e+02 Score=29.99 Aligned_cols=49 Identities=10% Similarity=-0.097 Sum_probs=40.6
Q ss_pred HHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 007862 471 CEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHG 519 (587)
Q Consensus 471 ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~ 519 (587)
|....+-..+.+++|+...++..+..++.++..+++..+++.+...+..
T Consensus 161 gslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 161 GSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444444678899999999999999999999999999999888776653
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=44.42 E-value=84 Score=35.85 Aligned_cols=134 Identities=19% Similarity=0.169 Sum_probs=82.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhhh-c-cc---ccCC-----CcceeehHHHHHHHHHHHHHHHHhhhhHHHHHhhC
Q 007862 418 TLLQRIGIGMIFSILSMIVAGLVERGRR-A-SA---HLHP-----MSQVSVFWLAPQLILMGFCEAFNIIGQIEFFNKQF 487 (587)
Q Consensus 418 ~~~~~i~~G~i~~~~s~~~~~~~~~~~~-~-~~---~~~~-----~~~~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~ 487 (587)
.+.+.+.++..+..+++........... + .. ..++ ........+..++-+.++|.+..-|...++-.+++
T Consensus 102 gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQf 181 (571)
T KOG1237|consen 102 GRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQF 181 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhccccc
Confidence 4557777887777777666554432211 1 00 0111 11112233445667778899999999999999999
Q ss_pred Cc----hh--hHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 007862 488 PD----HM--KSIANSLLFCSFGFASYLSSLLITIVHGVTARHGHPDWLTNDIDAGRLDYFYFLIAGLGGLNIVYFLYCA 561 (587)
Q Consensus 488 P~----~~--rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~~~~~l~~v~~~~~~ 561 (587)
++ +. +......+.+..+.|..++..+...+-+ ..+| ...|...++..++++++++...
T Consensus 182 d~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~------~~~w----------~lgf~i~~~~~~lai~iF~~g~ 245 (571)
T KOG1237|consen 182 DELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD------NVGW----------KLGFGIPTVLNALAILIFLPGF 245 (571)
T ss_pred CccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh------cccc----------eeeccHHHHHHHHHHHHHHcCc
Confidence 82 22 2246677778888888888766655532 2345 3446677777777777776655
Q ss_pred hhhccc
Q 007862 562 RRYRYK 567 (587)
Q Consensus 562 ~~~~~~ 567 (587)
+.++++
T Consensus 246 ~~y~~~ 251 (571)
T KOG1237|consen 246 PFYRYK 251 (571)
T ss_pred eeEEee
Confidence 555443
No 291
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=41.04 E-value=79 Score=34.30 Aligned_cols=110 Identities=14% Similarity=0.091 Sum_probs=55.1
Q ss_pred hhhhhhhhhchhhhhHHHhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceeehHHHHHHHHH
Q 007862 389 MITIGLWLPFYDTVLVPALRKITKHEGGITLLQRIGIGMIFSILSMIVAGLVERGRRASAHLHPMSQVSVFWLAPQLILM 468 (587)
Q Consensus 389 ~i~~~l~~~l~~~l~~~l~~r~~~r~~~~~~~~~i~~G~i~~~~s~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~ 468 (587)
...=+++.|++|.+ ..+|++||+ ..+.....+.+.-+..++.- .++-...++ ...+...+...++++
T Consensus 77 ~sLKllWaPiVDs~---y~k~~Grrk------sWvvp~q~llG~~mllLs~~---v~~~~g~ng-~~p~v~~lt~~f~LL 143 (510)
T KOG3574|consen 77 FSLKLLWAPIVDSV---YSKRFGRRK------SWVVPCQYLLGLFMLLLSYL---VDRGLGGNG-GLPNVVALTLLFLLL 143 (510)
T ss_pred HHHHHHHHhhhHHH---HHHhhcccc------ceeeehHHHHHHHHHHHhhC---CCcccccCC-CCcchHHHHHHHHHH
Confidence 34456778887766 244665554 23334444444344333321 111111111 122333343445556
Q ss_pred HHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHH
Q 007862 469 GFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSS 511 (587)
Q Consensus 469 ~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~ 511 (587)
-+..+.-..+.-.++..+..++.-|-++-.....+..|.+++.
T Consensus 144 nflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 144 NFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 6666666666666777777777666666555555555555554
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.58 E-value=2.2e+02 Score=25.00 Aligned_cols=35 Identities=14% Similarity=0.039 Sum_probs=27.7
Q ss_pred hCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 486 QFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGV 520 (587)
Q Consensus 486 ~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~ 520 (587)
......++.+.++-..+-.+++++-++.++++.+.
T Consensus 34 ~~a~s~k~~~~a~klssefIsGilVGa~iG~llD~ 68 (116)
T COG5336 34 SSAESIKGYAQAFKLSSEFISGILVGAGIGWLLDK 68 (116)
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788888888888888888888888888874
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=31.51 E-value=1.9e+02 Score=32.54 Aligned_cols=60 Identities=10% Similarity=0.097 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 007862 461 LAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGV 520 (587)
Q Consensus 461 li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~ 520 (587)
++.++++..+.....+.+..++-++++.+..-|++|-+.|..+++|+..-..+.-.+.|.
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 344678888999999999999999999999999999999999999998877766666655
No 294
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=28.23 E-value=1.3e+02 Score=22.58 Aligned_cols=37 Identities=8% Similarity=0.068 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 60 NIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 60 ~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
........+.....|+..|+++|.++..++..++..+
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3445556667778899999989997776666665544
No 295
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=27.51 E-value=95 Score=25.30 Aligned_cols=54 Identities=13% Similarity=0.126 Sum_probs=31.3
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHHHHHHHHhccceeee
Q 007862 187 SFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIGAIILFLVGKKLYVL 243 (587)
Q Consensus 187 ~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~~~~~~~~~~~~~~~ 243 (587)
.+-.++.....++++++ .+.||+.++ .+..+++.++..++++++...-.+.|++
T Consensus 8 ~ae~l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~y~r 61 (76)
T PF06645_consen 8 LAEKLMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPFYNR 61 (76)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHhhcC
Confidence 34445555667777777 555666665 4566666665555555555555555533
No 296
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=25.74 E-value=1.5e+02 Score=26.03 Aligned_cols=38 Identities=8% Similarity=-0.186 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhhhhHHHhhccccchhhhhHHHHHHHH
Q 007862 59 LNIWGGVTNFAPLLGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 59 ~~~~~~~~~~~~~~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
++.=.+...+...+-||+-|+|.|-++-.+|.+++...
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf 85 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGF 85 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 34444455555566799999999999887776666554
No 297
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=24.95 E-value=1e+02 Score=34.47 Aligned_cols=69 Identities=10% Similarity=0.102 Sum_probs=48.4
Q ss_pred HhccccccccccccccccCCCCCcccccchhhhhhHHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHHH
Q 007862 156 SIGTGGIRPCSIPFGVDQFDATTDEGVKGINSFFNWYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMIG 229 (587)
Q Consensus 156 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~~ 229 (587)
++..-.....-...+.+++|+.+ .+..++|-+....++...+-..+++.+.+..||+..-.+..+.+++
T Consensus 293 gi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 293 GISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 34444444555556667777643 4788888888888888877778889999999999877774443333
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.65 E-value=2.9e+02 Score=28.05 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=10.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHH
Q 007862 489 DHMKSIANSLLFCSFGFASYLSS 511 (587)
Q Consensus 489 ~~~rg~~~gl~~~~~~lg~~l~~ 511 (587)
+-+|..++|+..+..+..+.+.+
T Consensus 74 pii~~iGLglg~liW~s~n~l~G 96 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTG 96 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHH
Confidence 34455555554444444444433
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=21.93 E-value=2.3e+02 Score=30.52 Aligned_cols=95 Identities=8% Similarity=0.020 Sum_probs=49.4
Q ss_pred eeehHHHHHHHHHHHHHHHHhhhhHHHHHhhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCC--CCCccCC
Q 007862 456 VSVFWLAPQLILMGFCEAFNIIGQIEFFNKQFPDHMKSIANSLLFCSFGFASYLSSLLITIVHGVTARHGH--PDWLTND 533 (587)
Q Consensus 456 ~s~~~li~~~~l~~~ge~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~l~~~l~~~v~~~~~~~~~--~~w~~~~ 533 (587)
.++|+.-.++++...-..+..+....-+++....+.-|...|+..+. +-++=+.+.-++.|....+.+ ++.
T Consensus 324 ~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd~~g~~L~ir~Q~---- 396 (433)
T KOG3810|consen 324 QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFV---ALILQSILTLIVVDDRGLGLDIRTQF---- 396 (433)
T ss_pred cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHH---HHHHHHhheEEEEcccccCCCcceeE----
Confidence 46777777888887777776666555555444445455555554332 222222222233332111111 111
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHH
Q 007862 534 IDAGRLDYFYFLIAGLGGLNIVYFLYC 560 (587)
Q Consensus 534 ~~~~~~~~~f~~~~~~~~l~~v~~~~~ 560 (587)
.-|..+|..++++.+++....+..
T Consensus 397 ---~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 397 ---VVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred ---EEEeehHHHHHHHHHHHHHHHHHH
Confidence 124567888888888886654433
No 300
>PRK11469 hypothetical protein; Provisional
Probab=21.80 E-value=3.9e+02 Score=25.72 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=30.9
Q ss_pred hCCChhhHHHHHHHHHHHHHHHhh-hhHHHhhccccchhhhhHHHHHHHH
Q 007862 48 YHMNQTSAANILNIWGGVTNFAPL-LGAFISDTYIGRFKTITFASIAAIL 96 (587)
Q Consensus 48 ~~~s~~~~~~i~~~~~~~~~~~~~-~~G~laD~~~Gr~~~~~~~~~~~~~ 96 (587)
.|.+......+..+.+........ ++.++.++ +|||.-++-+.++..+
T Consensus 129 ~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~-~g~~a~~lgG~iLI~i 177 (188)
T PRK11469 129 LQVNIIATALAIGCATLIMSTLGMMVGRFIGSI-IGKKAEILGGLVLIGI 177 (188)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 344555555556665555554444 55556666 6999888888888777
No 301
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=21.77 E-value=6.7e+02 Score=24.04 Aligned_cols=37 Identities=11% Similarity=0.286 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccchhhHHHHHHHHHH
Q 007862 191 WYYTTFTVVILITQTVLVYIQDSVSWVIGFGIPTVLMI 228 (587)
Q Consensus 191 ~~~~~~~~g~~i~~~~~~~i~~~~~w~~~f~i~~~~~~ 228 (587)
..+...-++-.+|..+++++.+..+. +.++++....+
T Consensus 166 ~~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~l~ 202 (209)
T PF06912_consen 166 LRYLLIILSFFIGAILGALLYRRLGF-WALLLPALLLL 202 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 34445555556666666666666664 44444444433
No 302
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=20.76 E-value=2.1e+02 Score=24.93 Aligned_cols=64 Identities=9% Similarity=0.034 Sum_probs=43.8
Q ss_pred cccCCCCccchhHHHHHHHHHHHHhhhhHHHHHHHHHHhhC-CChhhHHHHHHHHHHHHHHHhhhhHHHhhc
Q 007862 9 DQKKPGGWKAMPYILGNETFERLATIGLLANFMVYLLKEYH-MNQTSAANILNIWGGVTNFAPLLGAFISDT 79 (587)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~-~s~~~~~~i~~~~~~~~~~~~~~~G~laD~ 79 (587)
=|+..+++.-+++......+..++|-..+..+.+++.+.+. +++...+.++.. .-.+-|.+|||
T Consensus 41 lrr~l~~~~Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L~~~~~~~l~~~vl~-------~F~~iG~lAqR 105 (106)
T PF11872_consen 41 LRRLLSGYHFILRTLAFILICAFGYGLLIVWLTPLLARQLAQLPNYWLAPVVLL-------SFILIGVLAQR 105 (106)
T ss_pred HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHH-------HHHHHHHHhcc
Confidence 34556777788888888888889998899999999998873 444433322211 11455777776
Done!