Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>007868
METLVGAEGNGEGQFKESRIHKTNSTFSSPNLGADPVVYKLVRVDGDGKLVPATDDELME
VGNLLADDKIEMHLVADAGPTGRCIFNERSSSGMPKLESSEGLSNSENAEADAGKLNTHL
ESIEEMLTKAKQEESHLLACGSPDHSSTYVLVDGQCSDQHDTLRGIDEKLQSEIPLQESD
LSSQSLSKSLNNQPSIHGECSNSSNGLVEGQRSTSAVYTSSKPEFSRLMGEICLDNLSIK
ELHETFKATFGRETTVKDKQWLKRRIAMGLTNSCDVSTSSFIIKDNKLVSKGGEGSCNKE
AIEDQAVKPVDGSGKESSLNPGSKMEDQQIVSSERLRTCSKDYSCADEDPLKEQRNAKRI
RKPTRRYIEELSEVESKEHGGKSIASVKNLGLGLMSSRSNTRPVRIASSNRITLRLDSLG
GSGVQIPYVSRVRRSRPRKNVKALMEFHPNGIGMAAKLVKEAVDVHSSEPNRESGGIVLK
ASSAPEQIQQQGQNMEPKNKDPSVYTPDDNPATVRAVKGGVRRKHHRAWTLSEVMKLVEG
VSKYGAGRWSEIKRLAFASYSYRTSVDLKVWTYIIVLGLAVANNLG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007868
        (586 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2030255 - symbol:TRFL6 "TRF-like 6" species:37...   775  5.5e-77   1
TAIR|locus:504955960 - symbol:TRFL8 "TRF-like 8" species:...   134  1.1e-05   1


>TAIR|locus:2030255 [details] [associations]
            symbol:TRFL6 "TRF-like 6" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009651
            "response to salt stress" evidence=IEP] [GO:0046686 "response to
            cadmium ion" evidence=IEP] [GO:0000956 "nuclear-transcribed mRNA
            catabolic process" evidence=RCA] [GO:0010048 "vernalization
            response" evidence=RCA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=RCA] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
            GO:GO:0046686 GO:GO:0003677 GO:GO:0009651 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
            PROSITE:PS51294 IPI:IPI00532857 RefSeq:NP_974133.1 UniGene:At.26165
            ProteinModelPortal:F4IDF1 SMR:F4IDF1 PRIDE:F4IDF1
            EnsemblPlants:AT1G72650.2 GeneID:843597 KEGG:ath:AT1G72650
            OMA:AGKWSEI Uniprot:F4IDF1
        Length = 630

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 228/634 (35%), Positives = 328/634 (51%)

Query:     1 METLVGAEGNGEGQFKESRIHKTNSTFSSPNLGADPVVYKLVRVDGDGKLVPATDDELME 60
             M T+VG   +    F E       + FSS N   +PV YKLVRV GDG LVPATD+E++E
Sbjct:     1 MGTVVGTVEDRRDMF-EGNAQTRITPFSSTNQIGNPVAYKLVRVSGDGSLVPATDEEILE 59

Query:    61 V---------------GNLLAD------DKIEMHLVADAGPTGRCIFNERSSSGMPKXXX 99
             V               G L  D      D+ +MH+ +DA  T   +  E   S + +   
Sbjct:    60 VNDTDMHIPSDTCQTIGYLATDEENVEVDETDMHIASDACQTIGYLPAEGIPSRLSQIES 119

Query:   100 XXXXXXXXXXXXDA----GKLNTHLESIEEMLTKAKQEESHLLACGSPDHSSTYVLVDGQ 155
                         +      ++ +  E  EEML K +QEE      GS    ST    + Q
Sbjct:   120 SEAINSGLLHSDNVQPYTDQVKSRSEYNEEMLQKVEQEERLENVHGS-QMPSTPADANIQ 178

Query:   156 CSDQHDTLRGIDEKLQSEIPXXXXXXXXXXXXXXXXXXXXIHGECSNSSNGLVEGQRSTS 215
             CS++++     ++++  E                      +   CSN+    V   + T+
Sbjct:   179 CSNENNFFE--EDQVHHE---------ALLQDECKMNESDMMERCSNA----VASPKETA 223

Query:   216 AVYTSSKPEFSRLMGEICLDNLSIKELHETFKATFGRETTVKDKQWLKRRIAMGLTNSCD 275
                 + KP+FSR+ GEICLDNL IK L ETF+ATFGR+TTVKDK WLKRRIAMGL NSCD
Sbjct:   224 LSAAAQKPDFSRVRGEICLDNLPIKALQETFRATFGRDTTVKDKTWLKRRIAMGLINSCD 283

Query:   276 VSTSSFIIKDNKLVSKGGEGSCNKEAIEDQAVKPVDGSGKESSLNPGSKMEDQQIVSSER 335
             V T++  +KDNKL+  G +   N       A++   G    ++     KM+D    S++ 
Sbjct:   284 VPTTNLRVKDNKLI--GNQEKSNDVT---NAIRKEMGDDVRAT-----KMKDAPS-STDH 332

Query:   336 LRTCSK--DYSCADEDPLKEQRNAKRIRKPTRRYIEELSEVESKEHGGKSIASVKNLGLG 393
             +   S   ++  A ED   EQR AKR+RKPTRRYIEELSE + K+   KS+   K+  L 
Sbjct:   333 VNGHSNGGNHYYASEDYSSEQRAAKRVRKPTRRYIEELSETDDKQQNDKSVIPSKDQRL- 391

Query:   394 LMSSRSNTRPVRIASSNRITL-RLDSLGGSGVQIXXXXXXXXXXXXKNVKALMEFHPNGI 452
               S +S  R + ++S  R+T+ R+ SL GS +++            +N+ AL+  H + +
Sbjct:   392 --SEKSEVRSISVSSGKRVTVTRMVSLAGSEIEVPYVSHVRRSRPRENIMALLGCHSSYL 449

Query:   453 GMAAKLVKEAVDVHSSEPNRE--SGGIVLKASSAPEQ--------------IQQQGQNME 496
                A   +  +++  S+ + E  +   V K++S P Q              + +  Q ME
Sbjct:   450 EDKASAAESNLNLSPSQLSSEVVNRDSVEKSASRPVQNEFATSDENNVEHILSEVDQEME 509

Query:   497 PKNKDPSVYTPDDNPATVRAVKGG-VRRKHHRAWTLSEVMKLVEGVSKYGAGRWSEIKRL 555
             P++ D S  + D+N   V  ++GG +RRKHHRAWTLSE+ KLVEGVSKYGAG+WSEIK+ 
Sbjct:   510 PEHIDSSGNSSDENNIGVPIMQGGALRRKHHRAWTLSEIAKLVEGVSKYGAGKWSEIKKH 569

Query:   556 AFASYSYRTSVDLK-VWTYIIVLGLAVA--NNLG 586
              F+S+SYRTSVDLK  W  ++    A +  N++G
Sbjct:   570 LFSSHSYRTSVDLKDKWRNLLKTSFAQSPSNSVG 603


>TAIR|locus:504955960 [details] [associations]
            symbol:TRFL8 "TRF-like 8" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] InterPro:IPR001005 InterPro:IPR009057
            SMART:SM00717 EMBL:CP002685 GO:GO:0003677 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
            PROSITE:PS51294 IPI:IPI00528898 RefSeq:NP_001031497.1
            RefSeq:NP_850275.1 UniGene:At.23344 ProteinModelPortal:F4IPY7
            SMR:F4IPY7 PRIDE:F4IPY7 EnsemblPlants:AT2G37025.1
            EnsemblPlants:AT2G37025.2 GeneID:818277 KEGG:ath:AT2G37025
            OMA:EDIYASH PhylomeDB:F4IPY7 Uniprot:F4IPY7
        Length = 410

 Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 27/69 (39%), Positives = 41/69 (59%)

Query:   508 DDNPATVRAVKGGVRRKHHRAWTLSEVMKLVEGVSKYGAGRWSEIKRLAFASYSYRTSVD 567
             DD   T  +     RRK+ R WTL EVM LV+G+S +G G+W++IK   F   ++R  VD
Sbjct:   274 DDISVTKTSRTKSDRRKNQRIWTLDEVMNLVDGISHFGVGKWTDIKNHFFHYAAHRKPVD 333

Query:   568 LK-VWTYII 575
             ++  W  ++
Sbjct:   334 IRDKWRNLL 342


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.129   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      586       539   0.00094  119 3  11 23  0.48    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  292 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  49.63u 0.13s 49.76t   Elapsed:  00:00:03
  Total cpu time:  49.63u 0.13s 49.76t   Elapsed:  00:00:03
  Start:  Sat May 11 01:12:19 2013   End:  Sat May 11 01:12:22 2013

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